Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins

scientific article

Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/bmcbi/ChoZ10
P6179Dimensions Publication ID1026195841
P356DOI10.1186/1471-2105-11-S3-S3
P932PMC publication ID2863062
P698PubMed publication ID20438650

P50authorAidong ZhangQ52927763
P2093author name stringYoung-Rae Cho
P2860cites workDynamical systems for discovering protein complexes and functional modules from biological networksQ51915917
Why do hubs tend to be essential in protein networks?Q33245657
Stratus not altocumulus: a new view of the yeast protein interaction networkQ33258019
The Stanford Microarray Database: implementation of new analysis tools and open source release of softwareQ33267232
Semantic integration to identify overlapping functional modules in protein interaction networksQ33291610
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledgeQ33370418
Modular organization of cellular networksQ34329388
In search of the biological significance of modular structures in protein networksQ35828145
Yeast two-hybrid contributions to interactome mapping.Q36522388
Modular organization of protein interaction networksQ38517471
NetGrep: fast network schema searches in interactomesQ41403742
Modularity and evolutionary constraint on proteinsQ44596996
An automated method for finding molecular complexes in large protein interaction networksQ21284295
The Gene Ontology project in 2008Q24649653
Network-based prediction of protein functionQ24670295
MINT: the Molecular INTeraction databaseQ24675827
Protein complexes and functional modules in molecular networksQ24683305
Clustering proteins from interaction networks for the prediction of cellular functionsQ24794683
The use of edge-betweenness clustering to investigate biological function in protein interaction networksQ24806078
Network biology: understanding the cell's functional organizationQ27861027
Collective dynamics of 'small-world' networksQ27861064
Mass spectrometry-based proteomicsQ28182890
The Database of Interacting Proteins: 2004 updateQ28234998
Uncovering the overlapping community structure of complex networks in nature and societyQ28255377
The BioGRID Interaction Database: 2008 updateQ28257199
MIPS: analysis and annotation of genome information in 2007Q28755645
Lethality and centrality in protein networksQ29547267
Evidence for dynamically organized modularity in the yeast protein-protein interaction networkQ29614449
IntAct--open source resource for molecular interaction dataQ29617575
Understanding protein dispensability through machine-learning analysis of high-throughput dataQ30969684
Protein protein interactions, evolutionary rate, abundance and age.Q33236253
Development and implementation of an algorithm for detection of protein complexes in large interaction networksQ33239865
P275copyright licenseCreative Commons Attribution 2.0 GenericQ19125117
P6216copyright statuscopyrightedQ50423863
P304page(s)S3
P577publication date2010-04-29
P1433published inBMC BioinformaticsQ4835939
P1476titleIdentification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins
P478volume11 Suppl 3

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cites work (P2860)
Q33766689Exploring hierarchical and overlapping modular structure in the yeast protein interaction network
Q40097830Global temporal dynamic landscape of pathogen-mediated subversion of Arabidopsis innate immunity
Q33935448HomPPI: a class of sequence homology based protein-protein interface prediction methods
Q34248032Improving biomarker list stability by integration of biological knowledge in the learning process.
Q36258805Integrative Variation Analysis Reveals that a Complex Genotype May Specify Phenotype in Siblings with Syndromic Autism Spectrum Disorder
Q38066338On the functional and structural characterization of hubs in protein–protein interaction networks

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