| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Adam S. Lauring | Q56869110 |
| Raul Andino | Q65508584 | ||
| P2860 | cites work | Quasispecies theory in the context of population genetics | Q21283965 |
| The error threshold | Q81268912 | ||
| The distribution of fitness effects caused by single-nucleotide substitutions in an RNA virus | Q22066390 | ||
| Fitness and its role in evolutionary genetics | Q22122004 | ||
| The causes and consequences of HIV evolution | Q22251040 | ||
| The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA | Q24305266 | ||
| RNA virus error catastrophe: direct molecular test by using ribavirin | Q24599371 | ||
| Mutational robustness can facilitate adaptation | Q24624037 | ||
| Turning up the volume on mutational pressure: is more of a good thing always better? (A case study of HIV-1 Vif and APOBEC3) | Q24645606 | ||
| Cytidine deamination induced HIV-1 drug resistance | Q24657298 | ||
| Increased fidelity reduces poliovirus fitness and virulence under selective pressure in mice | Q24817069 | ||
| Response of foot-and-mouth disease virus to increased mutagenesis: influence of viral load and fitness in loss of infectivity | Q27470003 | ||
| Mutagenesis versus Inhibition in the Efficiency of Extinction of Foot-and-Mouth Disease Virus | Q27477453 | ||
| Negative effects of chemical mutagenesis on the adaptive behavior of vesicular stomatitis virus | Q27480816 | ||
| Quasispecies Structure and Persistence of RNA Viruses | Q27487904 | ||
| Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein | Q27860488 | ||
| Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts | Q28179446 | ||
| DNA deamination mediates innate immunity to retroviral infection | Q28179534 | ||
| Evolution of digital organisms at high mutation rates leads to survival of the flattest | Q28207333 | ||
| Transgenic mice expressing a human poliovirus receptor: a new model for poliomyelitis | Q28241524 | ||
| Selforganization of matter and the evolution of biological macromolecules | Q28248277 | ||
| Avian influenza A (H5N1) infection in humans | Q28274603 | ||
| Lethal mutagenesis of HIV with mutagenic nucleoside analogs | Q28369649 | ||
| Selection for robustness in mutagenized RNA viruses | Q28469235 | ||
| Viral population estimation using pyrosequencing | Q28472641 | ||
| Rates of evolutionary change in viruses: patterns and determinants | Q29616174 | ||
| Quasispecies diversity determines pathogenesis through cooperative interactions in a viral population | Q29616266 | ||
| Rapid evolution of RNA genomes | Q29616272 | ||
| Emergence of a novel swine-origin influenza A (H1N1) virus in humans | Q29616833 | ||
| RNA virus mutations and fitness for survival | Q29619434 | ||
| Replicative fitness of historical and recent HIV-1 isolates suggests HIV-1 attenuation over time. | Q30351457 | ||
| Signature-tagged mutagenesis: barcoding mutants for genome-wide screens | Q33265184 | ||
| The fittest versus the flattest: experimental confirmation of the quasispecies effect with subviral pathogens. | Q33267906 | ||
| Evolution at a high imposed mutation rate: adaptation obscures the load in phage T7 | Q33628435 | ||
| G-->A hypermutation in protease and reverse transcriptase regions of human immunodeficiency virus type 1 residing in resting CD4+ T cells in vivo | Q33718616 | ||
| Sequence editing by Apolipoprotein B RNA-editing catalytic component [corrected] and epidemiological surveillance of transmitted HIV-1 drug resistance | Q41868619 | ||
| The broad-spectrum antiviral ribonucleoside ribavirin is an RNA virus mutagen | Q43545743 | ||
| Error thresholds and the constraints to RNA virus evolution | Q44997148 | ||
| Engineering attenuated virus vaccines by controlling replication fidelity | Q45397402 | ||
| The proportion of revertant and mutant phage in a growing population, as a function of mutation and growth rate. | Q52861440 | ||
| Nucleotide sequence heterogeneity of an RNA phage population. | Q54586350 | ||
| Selection forces and constraints on retroviral sequence variation. | Q55239815 | ||
| HIV-1 over time: fitness loss or robustness gain? | Q57259589 | ||
| Lethal mutagenesis of HIV by mutagenic ribonucleoside analogs | Q73340618 | ||
| Human immunodeficiency virus type 1 DNA sequences genetically damaged by hypermutation are often abundant in patient peripheral blood mononuclear cells and may be generated during near-simultaneous infection and activation of CD4(+) T cells | Q33853620 | ||
| Evolvability of an RNA virus is determined by its mutational neighbourhood | Q33914492 | ||
| Suppression of viral infectivity through lethal defection | Q33934382 | ||
| One hundred years of poliovirus pathogenesis | Q33992344 | ||
| Error catastrophe and antiviral strategy | Q34153584 | ||
| Rapid evolution of RNA viruses | Q34174014 | ||
| Molecular indetermination in the transition to error catastrophe: systematic elimination of lymphocytic choriomeningitis virus through mutagenesis does not correlate linearly with large increases in mutant spectrum complexity | Q34190672 | ||
| Epochal evolution shapes the phylodynamics of interpandemic influenza A (H3N2) in humans | Q34593954 | ||
| Lassa fever. Effective therapy with ribavirin | Q34694588 | ||
| Remote site control of an active site fidelity checkpoint in a viral RNA-dependent RNA polymerase | Q35012405 | ||
| Mutation rate and the efficacy of antimicrobial drug treatment. | Q35035358 | ||
| G-->A hypermutation of the human immunodeficiency virus type 1 genome: evidence for dCTP pool imbalance during reverse transcription | Q35154921 | ||
| A single mutation in poliovirus RNA-dependent RNA polymerase confers resistance to mutagenic nucleotide analogs via increased fidelity | Q35163547 | ||
| Viral error catastrophe by mutagenic nucleosides | Q35919839 | ||
| Ultra-deep pyrosequencing of hepatitis B virus quasispecies from nucleoside and nucleotide reverse-transcriptase inhibitor (NRTI)-treated patients and NRTI-naive patients. | Q35964704 | ||
| Exotic emerging viral diseases: progress and challenges | Q35971398 | ||
| Foot-and-mouth disease virus evolution: exploring pathways towards virus extinction | Q36008148 | ||
| Ribavirin and lethal mutagenesis of poliovirus: molecular mechanisms, resistance and biological implications | Q36008885 | ||
| Action of mutagenic agents and antiviral inhibitors on foot-and-mouth disease virus. | Q36008890 | ||
| Adaptive value of high mutation rates of RNA viruses: separating causes from consequences | Q36248500 | ||
| What is a quasispecies? | Q36433880 | ||
| Viruses as quasispecies: biological implications | Q36433889 | ||
| Virus fitness: concept, quantification, and application to HIV population dynamics. | Q36433892 | ||
| Antiviral drug resistance | Q36452096 | ||
| APOBEC-mediated viral restriction: not simply editing? | Q36736677 | ||
| RNA virus quasispecies populations can suppress vastly superior mutant progeny | Q36796348 | ||
| APOBEC proteins and intrinsic resistance to HIV-1 infection | Q37140468 | ||
| Massively parallel pyrosequencing in HIV research | Q37211581 | ||
| Ribavirin mode of action in chronic hepatitis C: from clinical use back to molecular mechanisms | Q37340946 | ||
| Contingent neutrality in competing viral populations | Q39606378 | ||
| Ribavirin causes error catastrophe during Hantaan virus replication. | Q39698441 | ||
| Mutation Frequencies at Defined Single Codon Sites in Vesicular Stomatitis Virus and Poliovirus Can Be Increased Only Slightly by Chemical Mutagenesis | Q40110327 | ||
| Mutagenesis-induced, large fitness variations with an invariant arenavirus consensus genomic nucleotide sequence | Q40391903 | ||
| KP-1212/1461, a nucleoside designed for the treatment of HIV by viral mutagenesis | Q40423448 | ||
| Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes | Q40488747 | ||
| Preextinction viral RNA can interfere with infectivity | Q40579254 | ||
| Lethal mutagenesis of the prototypic arenavirus lymphocytic choriomeningitis virus (LCMV). | Q40653667 | ||
| Viral quasispecies. | Q40828271 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 7 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | virus | Q808 |
| genetic variation | Q349856 | ||
| viral quasispecies | Q104765291 | ||
| biomedical investigative technique | Q66648976 | ||
| P304 | page(s) | e1001005 | |
| P577 | publication date | 2010-07-22 | |
| P1433 | published in | PLOS Pathogens | Q283209 |
| P1476 | title | Quasispecies theory and the behavior of RNA viruses | |
| P478 | volume | 6 |
| Q61803861 | A Triple Amino Acid Substitution at Position 88/94/95 in Glycoprotein GP2a of Type 1 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV1) Is Responsible for Adaptation to MARC-145 Cells |
| Q90433705 | A Turkey-origin H9N2 Avian Influenza Virus Shows Low Pathogenicity but Different Within-Host Diversity in Experimentally Infected Turkeys, Quail and Ducks |
| Q28681598 | A highly divergent Encephalomyocarditis virus isolated from nonhuman primates in Singapore |
| Q36456720 | A live, impaired-fidelity coronavirus vaccine protects in an aged, immunocompromised mouse model of lethal disease |
| Q92289508 | A natural polymorphism in Zika virus NS2A protein responsible of virulence in mice |
| Q34132718 | A novel approach for the rapid mutagenesis and directed evolution of the structural genes of west nile virus |
| Q42256652 | A novel pyrosequencing assay for the detection of neuraminidase inhibitor resistance-conferring mutations among clinical isolates of avian H7N9 influenza virus |
| Q93064899 | A proofreading-impaired herpesvirus generates populations with quasispecies-like structure |
| Q46273396 | ABC Assay: Method Development and Application to Quantify the Role of Three DWV Master Variants in Overwinter Colony Losses of European Honey Bees |
| Q33760353 | Accurate viral population assembly from ultra-deep sequencing data |
| Q28485505 | Ad35 and ad26 vaccine vectors induce potent and cross-reactive antibody and T-cell responses to multiple filovirus species |
| Q33806975 | Adaptation to fluctuating temperatures in an RNA virus is driven by the most stringent selective pressure |
| Q37488102 | Alphavirus mutator variants present host-specific defects and attenuation in mammalian and insect models |
| Q52624521 | Amino Acid Substitutions HA A150V, PA A343T, and PB2 E627K Increase the Virulence of H5N6 Influenza Virus in Mice. |
| Q28554999 | An Efficient Microarray-Based Genotyping Platform for the Identification of Drug-Resistance Mutations in Majority and Minority Subpopulations of HIV-1 Quasispecies |
| Q103804774 | An in silico approach to analyze HCV genotype-specific binding-site variation and its effect on drug-protein interaction |
| Q28547668 | Analysis of Dengue Virus Genetic Diversity during Human and Mosquito Infection Reveals Genetic Constraints |
| Q35211736 | Analysis of genetic variation and diversity of Rice stripe virus populations through high-throughput sequencing |
| Q37416692 | Analysis of intrapatient heterogeneity uncovers the microevolution of Middle East respiratory syndrome coronavirus. |
| Q34594027 | Analysis of the evolution and structure of a complex intrahost viral population in chronic hepatitis C virus mapped by ultradeep pyrosequencing |
| Q35574887 | Analysis of the genetic diversity of influenza A viruses using next-generation DNA sequencing |
| Q34595680 | Anaplasma marginale superinfection attributable to pathogen strains with distinct genomic backgrounds |
| Q37083396 | Antigenic characterization of influenza viruses produced using synthetic DNA and novel backbones |
| Q37914065 | Antiviral RNAi: translating science towards therapeutic success |
| Q26314431 | Antiviral defense mechanisms in honey bees |
| Q38014611 | Application of next-generation sequencing technologies in virology |
| Q35600172 | Applications of next-generation sequencing technologies to diagnostic virology |
| Q38255637 | Applications of omics approaches to the development of microbiological risk assessment using RNA virus dose-response models as a case study. |
| Q41922832 | Are RNA Viruses Candidate Agents for the Next Global Pandemic? A Review |
| Q38780069 | Attenuation of Foot-and-Mouth Disease Virus by Engineered Viral Polymerase Fidelity |
| Q37142568 | Avian influenza: mixed infections and missing viruses |
| Q27025965 | Axonal spread of neuroinvasive viral infections |
| Q34728767 | BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads |
| Q26859104 | Back to BAC: the use of infectious clone technologies for viral mutagenesis |
| Q57023692 | Beneficial coinfection can promote within-host viral diversity |
| Q38259889 | Beyond the whole genome consensus: unravelling of PRRSV phylogenomics using next generation sequencing technologies |
| Q45361918 | Biased mutational pattern and quasispecies hypothesis in H5N1 virus |
| Q38159719 | Bitter-sweet symphony: glycan-lectin interactions in virus biology |
| Q90051673 | Bottleneck Size-Dependent Changes in the Genetic Diversity and Specific Growth Rate of a Rotavirus A Strain |
| Q64915326 | Calicivirus RNA-Dependent RNA Polymerases: Evolution, Structure, Protein Dynamics, and Function. |
| Q37458902 | Cell tropism predicts long-term nucleotide substitution rates of mammalian RNA viruses |
| Q57008195 | Cellular N-myristoyltransferases play a crucial picornavirus genus-specific role in viral assembly, virion maturation, and infectivity |
| Q37084988 | Cerebrospinal fluid HIV-1 compartmentalization in a patient with AIDS and acute varicella-zoster virus meningomyeloradiculitis. |
| Q55709315 | Changes in the EV-A71 Genome through Recombination and Spontaneous Mutations: Impact on Virulence. |
| Q47547496 | Characterization of Equine Infectious Anemia Virus Long Terminal Repeat Quasispecies In Vitro and In Vivo |
| Q59350996 | Chikungunya virus fidelity variants exhibit differential attenuation and population diversity in cell culture and adult mice |
| Q92479540 | Collective Viral Spread Mediated by Virion Aggregates Promotes the Evolution of Defective Interfering Particles |
| Q98155172 | Comorbidities and the risk of severe or fatal outcomes associated with coronavirus disease 2019: A systematic review and meta-analysis |
| Q36382517 | Comparative analysis of cherry virus A genome sequences assembled from deep sequencing data |
| Q37336272 | Comparison of next-generation sequencing and clone-based sequencing in analysis of hepatitis B virus reverse transcriptase quasispecies heterogeneity. |
| Q42244355 | Complete genome sequences of porcine reproductive and respiratory syndrome viruses: perspectives on their temporal and spatial dynamics |
| Q34031182 | Complex recombination patterns arising during geminivirus coinfections preserve and demarcate biologically important intra-genome interaction networks |
| Q45353619 | Cooperation between different RNA virus genomes produces a new phenotype |
| Q92044124 | Cooperation between different variants: A unique potential for virus evolution |
| Q36723410 | Cooperation between distinct viral variants promotes growth of H3N2 influenza in cell culture. |
| Q35079166 | Coronaviruses: an RNA proofreading machine regulates replication fidelity and diversity |
| Q35814836 | Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction |
| Q64232923 | Cyclical adaptation of measles virus quasispecies to epithelial and lymphocytic cells: To V, or not to V |
| Q41582057 | DEVELOPMENTALLY REGULATED PLASMA MEMBRANE PROTEIN of Nicotiana benthamiana contributes to potyvirus movement and transports to plasmodesmata via the early secretory pathway and the actomyosin system |
| Q56888351 | Deep mutational scanning of hemagglutinin helps predict evolutionary fates of human H3N2 influenza variants |
| Q40377584 | Deep sequencing analysis of tick-borne encephalitis virus from questing ticks at natural foci reveals similarities between quasispecies pools of the virus |
| Q41378628 | Deep sequencing analysis of viral infection and evolution allows rapid and detailed characterization of viral mutant spectrum |
| Q30241725 | Deep sequencing for HIV-1 clinical management |
| Q37332277 | Deep sequencing identifies two genotypes and high viral genetic diversity of human pegivirus (GB virus C) in rural Ugandan patients |
| Q45326087 | Deep sequencing of foot-and-mouth disease virus reveals RNA sequences involved in genome packaging. |
| Q99726129 | Dengue and Zika Viruses: Epidemiological History, Potential Therapies, and Promising Vaccines |
| Q30398804 | Detection of resistance mutations to antivirals oseltamivir and zanamivir in avian influenza A viruses isolated from wild birds |
| Q43065263 | Determination of spontaneous mutation frequencies in measles virus under nonselective conditions |
| Q92356810 | Directed evolution as a tool for the selection of oncolytic RNA viruses with desired phenotypes |
| Q40094165 | Discovery of dapivirine, a nonnucleoside HIV-1 reverse transcriptase inhibitor, as a broad-spectrum antiviral against both influenza A and B viruses |
| Q21090495 | Discovery of the first insect nidovirus, a missing evolutionary link in the emergence of the largest RNA virus genomes |
| Q34672589 | Dissecting the dynamics of HIV-1 protein sequence diversity. |
| Q39039835 | Distribution and variability of deformed wing virus of honeybees (Apis mellifera) in the Middle East and North Africa |
| Q37268236 | Diversity in a honey bee pathogen: first report of a third master variant of the Deformed Wing Virus quasispecies |
| Q36200395 | Diversity of bat astroviruses in Lao PDR and Cambodia |
| Q35559276 | Diversity of coronavirus in bats from Eastern Thailand |
| Q36099353 | Dual E627K and D701N mutations in the PB2 protein of A(H7N9) influenza virus increased its virulence in mammalian models |
| Q40128267 | Dynamic Co-evolution and Interaction of Avian Leukosis Virus Genetic Variants and Host Immune Responses |
| Q38919847 | Effective lethal mutagenesis of influenza virus by three nucleoside analogs |
| Q37175897 | Effects of political conflict-induced treatment interruptions on HIV drug resistance |
| Q33638001 | Emergence of CXCR4-tropic HIV-1 variants followed by rapid disease progression in hemophiliac slow progressors |
| Q52655516 | Emergency Services of Viral RNAs: Repair and Remodeling. |
| Q66679531 | Endless Forms: Within-Host Variation in the Structure of the West Nile Virus RNA Genome during Serial Passage in Bird Hosts |
| Q93161920 | Enterovirus A71 Containing Codon-Deoptimized VP1 and High-Fidelity Polymerase as Next-Generation Vaccine Candidate |
| Q34542092 | Epitope dampening monotypic measles virus hemagglutinin glycoprotein results in resistance to cocktail of monoclonal antibodies. |
| Q40080931 | Escape of tick-borne flavivirus from 2' -C-methylated nucleoside antivirals is mediated by a single conservative mutation in NS5 that has a dramatic effect on viral fitness |
| Q39437753 | Establishment of a novel permissive cell line for the propagation of hepatitis C virus by expression of microRNA miR122. |
| Q38198617 | Establishment of chronic hepatitis C virus infection: translational evasion of oxidative defence |
| Q42243641 | Estimating the fraction of progeny virions that must incorporate APOBEC3G for suppression of productive HIV-1 infection |
| Q35839763 | Evolution and Emergence of Enteroviruses through Intra- and Inter-species Recombination: Plasticity and Phenotypic Impact of Modular Genetic Exchanges in the 5' Untranslated Region. |
| Q39661390 | Evolution and biogeography of an emerging quasispecies: diversity patterns of the fish Viral Hemorrhagic Septicemia virus (VHSv). |
| Q39818968 | Evolution of circoviruses in lorikeets lags behind its hosts |
| Q101116526 | Evolution of resistance to fluoroquinolones by dengue virus serotype 4 provides insight into mechanism of action and consequences for viral fitness |
| Q39071692 | Evolution of the influenza A virus genome during development of oseltamivir resistance in vitro |
| Q60345946 | Evolutionary Virology at 40 |
| Q55124363 | Evolutionary adaptation of an RNA bacteriophage to the simultaneous increase in the within-host and extracellular temperatures. |
| Q42249747 | Evolutionary advantage via common action of recombination and neutrality |
| Q100416601 | Evolutionary trajectory of fish Piscine novirhabdovirus (=Viral Hemorrhagic Septicemia Virus) across its Laurentian Great Lakes history: Spatial and temporal diversification |
| Q36156000 | Expansion of variant diversity associated with a high prevalence of pathogen strain superinfection under conditions of natural transmission |
| Q47269061 | Experimental manipulation of population-level MHC diversity controls pathogen virulence evolution in Mus musculus. |
| Q33606983 | Exploration of sequence space as the basis of viral RNA genome segmentation |
| Q49933555 | Extreme heterogeneity of influenza virus infection in single cells |
| Q38615396 | Fc receptors in antibody-dependent enhancement of viral infections |
| Q38158126 | Flavivirus structural heterogeneity: implications for cell entry |
| Q38989187 | Foot-and-mouth disease virus low-fidelity polymerase mutants are attenuated |
| Q91641973 | Gauging genetic diversity of generalists: A test of genetic and ecological generalism with RNA virus experimental evolution |
| Q30358203 | GeneSV - an Approach to Help Characterize Possible Variations in Genomic and Protein Sequences |
| Q34137544 | Generation and characterization of influenza A viruses with altered polymerase fidelity |
| Q54216105 | Generation and comparative genomics of synthetic dengue viruses. |
| Q40057948 | Generation of Escape Variants of Neutralizing Influenza Virus Monoclonal Antibodies |
| Q26314615 | Genetic Drift, Purifying Selection and Vector Genotype Shape Dengue Virus Intra-host Genetic Diversity in Mosquitoes |
| Q101217401 | Genetic diversity analysis of papaya leaf distortion mosaic virus isolates infecting transgenic papaya "Huanong No. 1" in South China |
| Q89858902 | Genetic diversity and evolution of SARS-CoV-2 |
| Q63880139 | Genetic diversity and host adaptation of avian H5N1 influenza viruses during human infection |
| Q54243881 | Genetic diversity and molecular evolution of Ornithogalum mosaic virus based on the coat protein gene sequence. |
| Q28477175 | Genetic heterogeneity of hepatitis C virus in association with antiviral therapy determined by ultra-deep sequencing |
| Q47547158 | Genetic stability of foot-and-mouth disease virus during long-term infections in natural hosts |
| Q38518789 | Genetic variability and distribution of Classical swine fever virus |
| Q37229743 | Genetic variability and evolution of rice stripe virus |
| Q45367996 | Genetic variability of East African cassava mosaic Cameroon virus under field and controlled environment conditions |
| Q39525506 | Genetic variation in Norwegian piscine myocarditis virus in Atlantic salmon, Salmo salar L. |
| Q41734301 | Genetic variation in potato virus M isolates infecting pepino (Solanum muricatum) in China |
| Q35043973 | Genetic variation of human papillomavirus type 16 in individual clinical specimens revealed by deep sequencing. |
| Q108132191 | Genome composition and genetic characterization of SARS-CoV-2 |
| Q28073351 | Genomic approaches for understanding dengue: insights from the virus, vector, and host |
| Q36194405 | Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer |
| Q35139151 | Genomic evolution of porcine reproductive and respiratory syndrome virus (PRRSV) isolates revealed by deep sequencing |
| Q37622050 | Genomic variation in macrophage-cultured European porcine reproductive and respiratory syndrome virus Olot/91 revealed using ultra-deep next generation sequencing |
| Q40072119 | Getting the flu: 5 key facts about influenza virus evolution |
| Q39236379 | Gp85 genetic diversity of avian leukosis virus subgroup J among different individual chickens from a native flock |
| Q26741356 | Hepatitis E Virus Mutations: Functional and Clinical Relevance |
| Q36246311 | Hepatitis E virus quasispecies and the outcome of acute hepatitis E in solid-organ transplant patients |
| Q36165598 | Heterogeneity of Cancer Stem Cells: Rationale for Targeting the Stem Cell Niche |
| Q30994798 | High definition viral vaccine strain identity and stability testing using full-genome population data--The next generation of vaccine quality control |
| Q30856812 | High-Performance Integrated Virtual Environment (HIVE) Tools and Applications for Big Data Analysis. |
| Q36491810 | High-resolution deep sequencing reveals biodiversity, population structure, and persistence of HIV-1 quasispecies within host ecosystems |
| Q28486995 | Hsp90 inhibitors exhibit resistance-free antiviral activity against respiratory syncytial virus |
| Q34463780 | Human Ebola virus infection in West Africa: a review of available therapeutic agents that target different steps of the life cycle of Ebola virus |
| Q27321390 | Identifying selection in the within-host evolution of influenza using viral sequence data |
| Q64263314 | Impact of Obesity on Influenza A Virus Pathogenesis, Immune Response, and Evolution |
| Q34098121 | Impact of host cell line adaptation on quasispecies composition and glycosylation of influenza A virus hemagglutinin |
| Q42049424 | Impact of increased mutagenesis on adaptation to high temperature in bacteriophage Qβ. |
| Q30888620 | Improved detection of artifactual viral minority variants in high-throughput sequencing data |
| Q38972691 | Improved replication efficiency of echovirus 5 after transfection of colon cancer cells using an authentic 5' RNA genome end methodology |
| Q40494008 | Improving virus production through quasispecies genomic selection and molecular breeding. |
| Q39737884 | In vivo evidence for ribavirin-induced mutagenesis of the hepatitis E virus genome |
| Q30388136 | In-Depth Analysis of HA and NS1 Genes in A(H1N1)pdm09 Infected Patients |
| Q107981962 | Increase of SARS-CoV-2 RNA load in faecal samples prompts for rethinking of SARS-CoV-2 biology and COVID-19 epidemiology |
| Q36891318 | Infectio: a Generic Framework for Computational Simulation of Virus Transmission between Cells. |
| Q45325873 | Inferred father-to-son transmission of herpes simplex virus results in near-perfect preservation of viral genome identity and in vivo phenotypes |
| Q93036365 | Influence of directional positive Darwinian selection-driven evolution on arboviruses Dengue and Zika virulence and pathogenesis |
| Q38381474 | Influence of population diversity on neurovirulence potential of plaque purified L-Zagreb variants |
| Q30365481 | Influenza A virus acquires enhanced pathogenicity and transmissibility after serial passages in swine |
| Q38737075 | Influenza infection in human host: challenges in making a better influenza vaccine |
| Q24273306 | Insights into arbovirus evolution and adaptation from experimental studies |
| Q92812154 | Inter- Versus Intra-Host Sequence Diversity of pH1N1 and Associated Clinical Outcomes |
| Q43742510 | Interclade recombination in porcine parvovirus strains |
| Q35993707 | Interplay between HIV-1 and Host Genetic Variation: A Snapshot into Its Impact on AIDS and Therapy Response. |
| Q90362089 | Into the Deep (Sequence) of the Foot-and-Mouth Disease Virus Gene Pool: Bottlenecks and Adaptation during Infection in Naïve and Vaccinated Cattle |
| Q92657665 | Intrahost Selection Pressure Drives Equine Arteritis Virus Evolution during Persistent Infection in the Stallion Reproductive Tract |
| Q92717896 | Inventory of molecular markers affecting biological characteristics of avian influenza A viruses |
| Q38994123 | Invertebrate RNA virus diversity from a taxonomic point of view |
| Q40691185 | Involvement of a joker mutation in a polymerase-independent lethal mutagenesis escape mechanism |
| Q33982623 | Israeli acute paralysis virus: epidemiology, pathogenesis and implications for honey bee health |
| Q47550801 | Know Your Enemy: Successful Bioinformatic Approaches to Predict Functional RNA Structures in Viral RNAs. |
| Q36478122 | LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets |
| Q40449556 | Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants. |
| Q91214893 | Long-term passage of duck Tembusu virus in BHK-21 cells generates a completely attenuated and immunogenic population with increased genetic diversity |
| Q40843573 | Major mutation events in structural genes of peste des petits ruminants virus through serial passages in vitro |
| Q52591749 | Mapping the Evolutionary Potential of RNA Viruses. |
| Q64081503 | Marine RNA Virus Quasispecies Are Distributed throughout the Oceans |
| Q35982583 | Mathematical Modeling of Viral Zoonoses in Wildlife |
| Q35382314 | Mechanisms controlling virulence thresholds of mixed viral populations |
| Q90747780 | Membrane-Associated Enteroviruses Undergo Intercellular Transmission as Pools of Sibling Viral Genomes |
| Q64258840 | MicroRNA and Nonsense Transcripts as Putative Viral Evasion Mechanisms |
| Q33569544 | Middle East respiratory syndrome coronavirus quasispecies that include homologues of human isolates revealed through whole-genome analysis and virus cultured from dromedary camels in Saudi Arabia |
| Q45325627 | Molecular and epidemiological analysis of pandemic and post-pandemic influenza A(H1N1)pdm09 virus from central India |
| Q42245262 | Molecular characterization of the surface glycoprotein genes of highly pathogenic H5N1 avian influenza viruses detected in Iran in 2011. |
| Q30421000 | Molecular evolutionary analysis of pH1N1 2009 influenza virus in Reunion Island, South West Indian Ocean region: a cohort study |
| Q41606446 | Molecular phylogeography of canine distemper virus: Geographic origin and global spreading. |
| Q50287638 | Mosquito bottlenecks alter viral mutant swarm in a tissue and time-dependent manner with contraction and expansion of variant positions and diversity. |
| Q61810920 | Multiple infection of cells changes the dynamics of basic viral evolutionary processes |
| Q30501773 | Multiploid inheritance of HIV-1 during cell-to-cell infection |
| Q37453174 | Mutability dynamics of an emergent single stranded DNA virus in a naïve host. |
| Q34326649 | Mutagenesis-mediated decrease of pathogenicity as a feature of the mutant spectrum of a viral population |
| Q41896864 | Mutagenesis-mediated virus extinction: virus-dependent effect of viral load on sensitivity to lethal defection |
| Q28476736 | Mutation of HIV-1 genomes in a clinical population treated with the mutagenic nucleoside KP1461 |
| Q28552784 | Mutations Related to Antiretroviral Resistance Identified by Ultra-Deep Sequencing in HIV-1 Infected Children under Structured Interruptions of HAART |
| Q59350009 | Mycoviral Population Dynamics in Spanish Isolates of the Entomopathogenic Fungus |
| Q61813824 | Naturally Occurring Mutations within HBV Surface Promoter II Sequences Affect Transcription Activity, HBsAg and HBV DNA Levels in HBeAg-Positive Chronic Hepatitis B Patients |
| Q36694134 | Network Analysis of the Chronic Hepatitis C Virome Defines Hypervariable Region 1 Evolutionary Phenotypes in the Context of Humoral Immune Responses |
| Q38320704 | Neutralizing DNA aptamers against swine influenza H3N2 viruses |
| Q37946109 | New concepts in measles virus replication: getting in and out in vivo and modulating the host cell environment |
| Q26749548 | New strategies against drug resistance to herpes simplex virus |
| Q38268384 | Next-generation sequencing in veterinary medicine: how can the massive amount of information arising from high-throughput technologies improve diagnosis, control, and management of infectious diseases? |
| Q34994579 | Next-generation sequencing of HIV-1 RNA genomes: determination of error rates and minimizing artificial recombination |
| Q45324383 | Novel Synthesis and Phenotypic Analysis of Mutant Clouds for Hepatitis E Virus Genotype 1. |
| Q102220398 | Novel viruses detected in bats in the Republic of Korea |
| Q96690341 | Obesity and diabetes as high-risk factors for severe coronavirus disease 2019 (COVID-19) |
| Q90008053 | Obesity-Related Microenvironment Promotes Emergence of Virulent Influenza Virus Strains |
| Q51559957 | On the relation between the Eigen model and the asexual Wright-Fisher model. |
| Q30611167 | PRICE: software for the targeted assembly of components of (Meta) genomic sequence data |
| Q47547776 | Peach RNA viromes in six different peach cultivars. |
| Q92049704 | Persistent Infection of African Buffalo (Syncerus caffer) with Foot-and-Mouth Disease Virus: Limited Viral Evolution and No Evidence of Antibody Neutralization Escape |
| Q92438430 | Pervasive within-host recombination and epistasis as major determinants of the molecular evolution of the foot-and-mouth disease virus capsid |
| Q39120524 | Picornaviral polymerase structure, function, and fidelity modulation |
| Q40796897 | Polymorphic substitution E157Q in HIV-1 integrase increases R263K-mediated dolutegravir resistance and decreases DNA binding activity |
| Q30360630 | Polymorphisms at residue 222 of the hemagglutinin of pandemic influenza A(H1N1)pdm09: association of quasi-species to morbidity and mortality in different risk categories |
| Q53703696 | Profiling the in vitro drug-resistance mechanism of influenza A viruses towards the AM2-S31N proton channel blockers. |
| Q42731526 | Prospects for personalizing antiviral therapy for hepatitis C virus with pharmacogenetics |
| Q97646303 | Protective Immunity against SARS Subunit Vaccine Candidates Based on Spike Protein: Lessons for Coronavirus Vaccine Development |
| Q47264794 | QSdpR: Viral quasispecies reconstruction via correlation clustering |
| Q41922052 | Quantitative characterization of hepatitis delta virus genome edition by next-generation sequencing |
| Q99555141 | Quasi-species nature and differential gene expression of severe acute respiratory syndrome coronavirus 2 and phylogenetic analysis of a novel Iranian strain |
| Q34030011 | Quasispecies as a matter of fact: viruses and beyond. |
| Q38865552 | Quasispecies evolution of the prototypical genotype 1 porcine reproductive and respiratory syndrome virus early during in vivo infection is rapid and tissue specific. |
| Q21146731 | Quasispecies in population of compositional assemblies |
| Q38711204 | Quasispecies of Hepatitis C Virus Participate in Cell-Specific Infectivity |
| Q50146005 | RNA 3-dimensional structural motifs as a critical constraint of viroid RNA evolution. |
| Q45324684 | RNA Virus Evolution via a Quasispecies-Based Model Reveals a Drug Target with a High Barrier to Resistance |
| Q58580111 | RNA Virus Fidelity Mutants: A Useful Tool for Evolutionary Biology or a Complex Challenge? |
| Q35562126 | RNA editing by T7 RNA polymerase bypasses InDel mutations causing unexpected phenotypic changes |
| Q28076177 | Recent advances in inferring viral diversity from high-throughput sequencing data |
| Q31034162 | Recombination between poliovirus and coxsackie A viruses of species C: a model of viral genetic plasticity and emergence |
| Q34089376 | Recombination hotspots and host susceptibility modulate the adaptive value of recombination during maize streak virus evolution |
| Q90193407 | Recombination in Enteroviruses, a Multi-Step Modular Evolutionary Process |
| Q26777408 | Resistance of Hepatitis C Virus to Inhibitors: Complexity and Clinical Implications |
| Q30410029 | Rethinking approaches to improve the utilization of nucleic acid amplification tests for detection and characterization of influenza A in diagnostic and reference laboratories |
| Q28304041 | Rethinking quasispecies theory: From fittest type to cooperative consortia |
| Q38680546 | Reverse spillover of avian viral vaccine strains from domesticated poultry to wild birds |
| Q37713899 | Ribavirin-resistant variants of foot-and-mouth disease virus: the effect of restricted quasispecies diversity on viral virulence |
| Q36433974 | Sabin Vaccine Reversion in the Field: a Comprehensive Analysis of Sabin-Like Poliovirus Isolates in Nigeria |
| Q59133574 | Seasonal Genetic Drift of Human Influenza A Virus Quasispecies Revealed by Deep Sequencing |
| Q30384346 | Selective Bottlenecks Shape Evolutionary Pathways Taken during Mammalian Adaptation of a 1918-like Avian Influenza Virus |
| Q42377402 | Sequence-specific detection of different strains of LCMV in a single sample using tentacle probes |
| Q30431535 | Sequencing viral genomes from a single isolated plaque |
| Q43977684 | Single-Cell Virology: On-Chip Investigation of Viral Infection Dynamics |
| Q28483749 | Stochastic simulations suggest that HIV-1 survives close to its error threshold |
| Q56395758 | Strategy for efficient generation of numerous full-length cDNA clones of classical swine fever virus for haplotyping |
| Q92253559 | Stronger together: Multi-genome transmission of measles virus |
| Q58097211 | Structural and Nonstructural Genes Contribute to the Genetic Diversity of RNA Viruses |
| Q92290844 | Studying Evolutionary Adaptation of MERS-CoV |
| Q38949462 | Superinfection exclusion and the long-term survival of honey bees in Varroa-infested colonies |
| Q39701112 | Synthetic lethals in HIV: ways to avoid drug resistance : Running title: Preventing HIV resistance. |
| Q30423620 | Systematic identification of H274Y compensatory mutations in influenza A virus neuraminidase by high-throughput screening |
| Q37519849 | Systemic spread and propagation of a plant-pathogenic virus in European honeybees, Apis mellifera. |
| Q38047645 | Targeting the host or the virus: current and novel concepts for antiviral approaches against influenza virus infection |
| Q38894946 | The 5' untranslated region of a novel infectious molecular clone of the dicistrovirus cricket paralysis virus modulates infection |
| Q94545219 | The Current and Future State of Vaccines, Antivirals and Gene Therapies Against Emerging Coronaviruses |
| Q99605071 | The Genetic Diversification of a Single Bluetongue Virus Strain Using an In Vitro Model of Alternating-Host Transmission |
| Q98171290 | The Impact of Mutations in SARS-CoV-2 Spike on Viral Infectivity and Antigenicity |
| Q36868812 | The defective RNAs of Closteroviridae |
| Q37999021 | The double-edged sword: How evolution can make or break a live-attenuated virus vaccine |
| Q91941877 | The effect of genetic complementation on the fitness and diversity of viruses spreading as collective infectious units |
| Q36963496 | The emergence of drug resistant HIV variants and novel anti-retroviral therapy |
| Q92540850 | The evolution and characterization of influenza A(H7N9) virus under the selective pressure of peramivir |
| Q40097825 | The high frequency of non-aspartic acid residues at HA222 in influenza A(H1N1) 2009 pandemic viruses is associated with mortality during the upsurge of 2015: a molecular and epidemiological study from central India |
| Q91583736 | The honeybee (Apis mellifera) developmental state shapes the genetic composition of the deformed wing virus-A quasispecies during serial transmission |
| Q21559478 | The origin of novel avian influenza A (H7N9) and mutation dynamics for its human-to-human transmissible capacity |
| Q33781351 | The pepper virome: natural co-infection of diverse viruses and their quasispecies |
| Q34987357 | The plant host can affect the encapsidation of brome mosaic virus (BMV) RNA: BMV virions are surprisingly heterogeneous |
| Q34569574 | The reverse genetics applied to fish RNA viruses |
| Q42177302 | The shape-shifting quasispecies of RNA: one sequence, many functional folds |
| Q44843501 | The synergistic effect of nsP2-L618, nsP3-R117, and E2-K187 on the large plaque phenotype of chikungunya virus |
| Q35224851 | Time-calibrated phylogenomics of the classical swine fever viruses: genome-wide bayesian coalescent approach |
| Q57094050 | Time-calibrated phylogenomics of the porcine epidemic diarrhea virus: genome-wide insights into the spatio-temporal dynamics |
| Q37136609 | Towards multiscale modeling of influenza infection |
| Q40056648 | Tracing hepatitis B virus (HBV) genotype B5 (formerly B6) evolutionary history in the circumpolar Arctic through phylogeographic modelling |
| Q35760795 | Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission |
| Q48094480 | Trans-heteroclinic bifurcation: a novel type of catastrophic shift. |
| Q24615269 | Transgenerational inheritance of an acquired small RNA-based antiviral response in C. elegans |
| Q37360076 | Transstadial Transmission and Long-term Association of Crimean-Congo Hemorrhagic Fever Virus in Ticks Shapes Genome Plasticity |
| Q42315538 | TumorNext: A comprehensive tumor profiling assay that incorporates high resolution copy number analysis and germline status to improve testing accuracy |
| Q40711295 | Ultra Deep Sequencing of a Baculovirus Population Reveals Widespread Genomic Variations |
| Q34583054 | Ultra-deep mutant spectrum profiling: improving sequencing accuracy using overlapping read pairs |
| Q30421453 | Universal amplification, next-generation sequencing, and assembly of HIV-1 genomes |
| Q42215545 | Use of host-like peptide motifs in viral proteins is a prevalent strategy in host-virus interactions |
| Q52316681 | Variability Studies of Two Prunus-Infecting Fabaviruses with the Aid of High-Throughput Sequencing. |
| Q35422196 | ViQuaS: an improved reconstruction pipeline for viral quasispecies spectra generated by next-generation sequencing |
| Q64078035 | Viral RNA-dependent RNA polymerase mutants display an altered mutation spectrum resulting in attenuation in both mosquito and vertebrate hosts |
| Q36179597 | Viral population dynamics and virulence thresholds |
| Q86320171 | Viral quasispecies |
| Q35984339 | Viral quasispecies complexity measures. |
| Q27013917 | Viral quasispecies evolution |
| Q34525444 | Viral quasispecies inference from 454 pyrosequencing |
| Q55492199 | Viral quasispecies reconstruction via tensor factorization with successive read removal. |
| Q57285695 | Viroid research and its significance for RNA technology and basic biochemistry |
| Q36602464 | Viruliferous rate of small brown planthopper is a good indicator of rice stripe disease epidemics |
| Q42196285 | Virus-derived gene expression and RNA interference vector for grapevine |
| Q89754975 | West Nile Virus fidelity modulates the capacity for host cycling and adaptation |
| Q89457145 | Wide spectrum and high frequency of genomic structural variation, including transposable elements, in large double-stranded DNA viruses |
| Q27319869 | Widespread recombination, reassortment, and transmission of unbalanced compound viral genotypes in natural arenavirus infections |
| Q54256631 | Within-Host Evolution of Human Influenza Virus. |
| Q55370272 | Within-Host Recombination in the Foot-and-Mouth Disease Virus Genome. |
| Q35047735 | Within-host nucleotide diversity of virus populations: insights from next-generation sequencing |
| Q55500682 | Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV. |
| Q33911231 | [KIL-d] Protein Element Confers Antiviral Activity via Catastrophic Viral Mutagenesis |
Search more.