scholarly article | Q13442814 |
P2093 | author name string | C Ho | |
D M Hillis | |||
A Gulati | |||
I J Molineux | |||
J J Bull | |||
J P Huelsenbeck | |||
H A Wichman | |||
M R Badgett | |||
P2860 | cites work | Nucleotide sequence of bacteriophage φX174 DNA | Q22122422 |
Mechanism of action of quinolones against Escherichia coli DNA gyrase | Q24681063 | ||
Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites | Q29618512 | ||
The molecular evolution of pancreatic ribonuclease | Q30011363 | ||
Use of amino acid sequence data in phylogeny and evaluation of methods using computer simulation | Q31048668 | ||
Erythromycin resistance by ribosome modification | Q39779280 | ||
Evolution of bacteriophage T7 in a growing plaque | Q39885188 | ||
Convergent evolution: the need to be explicit | Q40731512 | ||
Application and accuracy of molecular phylogenies | Q40746824 | ||
Ordered accumulation of mutations in HIV protease confers resistance to ritonavir | Q42555782 | ||
Resistance of human immunodeficiency virus type 1 to protease inhibitors: selection of resistance mutations in the presence and absence of the drug. | Q45771435 | ||
Excessive homoplasy in an evolutionarily constrained protein. | Q52547854 | ||
Reducing antibiotic resistance. | Q54588726 | ||
Chemostats used for studying natural selection and adaptive evolution. | Q54664994 | ||
Experimental Phylogenetics: Generation of a Known Phylogeny | Q54684327 | ||
The use of amino acid sequence analysis in assessing evolution | Q66979203 | ||
Eclipse kinetics as a probe of quaternary structure in bacteriophage phi X174 | Q67290167 | ||
Growth of bacteriophage phiX-174 at elevated temperatures | Q70532691 | ||
Re: Molecules and morphology in amniote phylogeny | Q71741764 | ||
Intercistronic regions in phi X174 DNA. II. Biochemical and biological analysis of mutants with altered intercistronic regions between genes J and F | Q72869251 | ||
Parallel molecular evolution of deletions and nonsense mutations in bacteriophage T7 | Q72990123 | ||
P433 | issue | 4 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | convergent evolution | Q200312 |
P1104 | number of pages | 11 | |
P304 | page(s) | 1497-1507 | |
P577 | publication date | 1997-12-01 | |
P1433 | published in | Genetics | Q3100575 |
P1476 | title | Exceptional convergent evolution in a virus | |
P478 | volume | 147 |
Q36177444 | Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes |
Q33806975 | Adaptation to fluctuating temperatures in an RNA virus is driven by the most stringent selective pressure |
Q58586604 | Adaptation to sub-optimal hosts is a driver of viral diversification in the ocean |
Q42420694 | Adaptive divergence in experimental populations of Pseudomonas fluorescens. II. Role of the GGDEF regulator WspR in evolution and development of the wrinkly spreader phenotype |
Q24545052 | Adaptive molecular evolution for 13,000 phage generations: a possible arms race |
Q34626340 | Adaptive regulatory substitutions affect multiple stages in the life cycle of the bacteriophage φX174 |
Q47587442 | Additive Phenotypes Underlie Epistasis of Fitness Effects |
Q27487316 | Antagonistic Pleiotropy Involving Promoter Sequences in a Virus |
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Q28766710 | Bushes in the tree of life |
Q28082810 | Can the experimental evolution programme help us elucidate the genetic basis of adaptation in nature? |
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Q27473199 | Differential evolution of eastern equine encephalitis virus populations in response to host cell type |
Q34249421 | Differential transcription of bacteriophage φX174 genes at 37 °C and 42 °C. |
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Q73788732 | Divergent evolution during an experimental adaptive radiation |
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Q41907301 | Epistasis and the adaptability of an RNA virus |
Q44997148 | Error thresholds and the constraints to RNA virus evolution |
Q52654022 | Essential is not irreplaceable: fitness dynamics of experimental E. coli RNase P RNA heterologous replacement. |
Q34616074 | Evaluating the impact of population bottlenecks in experimental evolution |
Q41119821 | Evaluating the within-host fitness effects of mutations fixed during virus adaptation to different ecotypes of a new host |
Q37211393 | Evidence for an ancient adaptive episode of convergent molecular evolution. |
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Q37186661 | Evolution in spatially mixed host environments increases divergence for evolved fitness and intrapopulation genetic diversity in RNA viruses. |
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Q28252974 | In vivo continuous directed evolution |
Q93047512 | Inactivation of a Mismatch-Repair System Diversifies Genotypic Landscape of Escherichia coli During Adaptive Laboratory Evolution |
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Q42549620 | Models of experimental evolution: the role of genetic chance and selective necessity. |
Q27473380 | Molecular Clocks and the Puzzle of RNA Virus Origins |
Q34616146 | Molecular basis of adaptive convergence in experimental populations of RNA viruses. |
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