Exceptional convergent evolution in a virus.

scientific article published in December 1997

Exceptional convergent evolution in a virus. is …
instance of (P31):
scholarly articleQ13442814

External links are
P932PMC publication ID1208326
P698PubMed publication ID9409816

P2093author name stringC Ho
D M Hillis
A Gulati
I J Molineux
J J Bull
J P Huelsenbeck
H A Wichman
M R Badgett
P2860cites workNucleotide sequence of bacteriophage φX174 DNAQ22122422
Mechanism of action of quinolones against Escherichia coli DNA gyraseQ24681063
Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sitesQ29618512
The molecular evolution of pancreatic ribonucleaseQ30011363
Use of amino acid sequence data in phylogeny and evaluation of methods using computer simulationQ31048668
Erythromycin resistance by ribosome modificationQ39779280
Evolution of bacteriophage T7 in a growing plaqueQ39885188
Convergent evolution: the need to be explicitQ40731512
Application and accuracy of molecular phylogeniesQ40746824
Ordered accumulation of mutations in HIV protease confers resistance to ritonavirQ42555782
Resistance of human immunodeficiency virus type 1 to protease inhibitors: selection of resistance mutations in the presence and absence of the drug.Q45771435
Excessive homoplasy in an evolutionarily constrained protein.Q52547854
Reducing antibiotic resistance.Q54588726
Chemostats used for studying natural selection and adaptive evolution.Q54664994
Experimental Phylogenetics: Generation of a Known PhylogenyQ54684327
The use of amino acid sequence analysis in assessing evolutionQ66979203
Eclipse kinetics as a probe of quaternary structure in bacteriophage phi X174Q67290167
Growth of bacteriophage phiX-174 at elevated temperaturesQ70532691
Re: Molecules and morphology in amniote phylogenyQ71741764
Intercistronic regions in phi X174 DNA. II. Biochemical and biological analysis of mutants with altered intercistronic regions between genes J and FQ72869251
Parallel molecular evolution of deletions and nonsense mutations in bacteriophage T7Q72990123
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectconvergent evolutionQ200312
P1104number of pages11
P304page(s)1497-1507
P577publication date1997-12-01
P1433published inGeneticsQ3100575
P1476titleExceptional convergent evolution in a virus
P478volume147

Reverse relations

cites work (P2860)
Q36177444Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes
Q33806975Adaptation to fluctuating temperatures in an RNA virus is driven by the most stringent selective pressure
Q58586604Adaptation to sub-optimal hosts is a driver of viral diversification in the ocean
Q42420694Adaptive divergence in experimental populations of Pseudomonas fluorescens. II. Role of the GGDEF regulator WspR in evolution and development of the wrinkly spreader phenotype
Q24545052Adaptive molecular evolution for 13,000 phage generations: a possible arms race
Q34626340Adaptive regulatory substitutions affect multiple stages in the life cycle of the bacteriophage φX174
Q47587442Additive Phenotypes Underlie Epistasis of Fitness Effects
Q27487316Antagonistic Pleiotropy Involving Promoter Sequences in a Virus
Q41813977Antagonistic coevolution accelerates molecular evolution
Q28307125Bacteriophages use an expanded genetic code on evolutionary paths to higher fitness
Q37872073Biological properties and cell tropism of Chp2, a bacteriophage of the obligate intracellular bacterium Chlamydophila abortus
Q28766710Bushes in the tree of life
Q28082810Can the experimental evolution programme help us elucidate the genetic basis of adaptation in nature?
Q28727500Cancer in light of experimental evolution
Q33829798Causes of molecular convergence and parallelism in protein evolution
Q35432114Changing folding and binding stability in a viral coat protein: a comparison between substitutions accessible through mutation and those fixed by natural selection
Q34296269Comparative analysis of two phenotypically-similar but genomically-distinct Burkholderia cenocepacia-specific bacteriophages
Q36500717Constructive neutral evolution: exploring evolutionary theory's curious disconnect
Q42204146Contribution of silent mutations to thermal adaptation of RNA bacteriophage Qβ
Q28749434Convergence in pigmentation at multiple levels: mutations, genes and function
Q27473199Differential evolution of eastern equine encephalitis virus populations in response to host cell type
Q34249421Differential transcription of bacteriophage φX174 genes at 37 °C and 42 °C.
Q41166962Diminishing Returns From Beneficial Mutations and Pervasive Epistasis Shape the Fitness Landscape for Rifampicin Resistance in Pseudomonas aeruginosa
Q73788732Divergent evolution during an experimental adaptive radiation
Q39579576Effects of adaptation, chance, and history on the evolution of the toxic dinoflagellate Alexandrium minutum under selection of increased temperature and acidification
Q41907301Epistasis and the adaptability of an RNA virus
Q44997148Error thresholds and the constraints to RNA virus evolution
Q52654022Essential is not irreplaceable: fitness dynamics of experimental E. coli RNase P RNA heterologous replacement.
Q34616074Evaluating the impact of population bottlenecks in experimental evolution
Q41119821Evaluating the within-host fitness effects of mutations fixed during virus adaptation to different ecotypes of a new host
Q37211393Evidence for an ancient adaptive episode of convergent molecular evolution.
Q41839414Evolution by flight and fight: diverse mechanisms of adaptation by actively motile microbes
Q37186661Evolution in spatially mixed host environments increases divergence for evolved fitness and intrapopulation genetic diversity in RNA viruses.
Q51701300Evolution of host specificity drives reproductive isolation among RNA viruses.
Q28748402Evolution: like any other science it is predictable
Q55124363Evolutionary adaptation of an RNA bacteriophage to the simultaneous increase in the within-host and extracellular temperatures.
Q39789342Evolutionary changes in growth rate and toxin production in the cyanobacterium Microcystis aeruginosa under a scenario of eutrophication and temperature increase.
Q24538687Evolutionary dynamics of viral attenuation
Q34389949Evolutionary genomics of host-use in bifurcating demes of RNA virus phi-6
Q41132191Evolutionary implications of Liebig's law of the minimum: Selection under low concentrations of two nonsubstitutable nutrients
Q27473193Evolutionary reversals during viral adaptation to alternating hosts
Q33728619Evolutionary trajectory of white spot syndrome virus (WSSV) genome shrinkage during spread in Asia
Q42707232Experimental adaptation of an RNA virus mimics natural evolution
Q33325656Experimental evolution and genome sequencing reveal variation in levels of clonal interference in large populations of bacteriophage phiX174.
Q41848193Experimental evolution of pseudogenization and gene loss in a plant RNA virus
Q34109071Experimental evolution of viruses: Microviridae as a model system
Q35212924Experimental evolution recapitulates natural evolution
Q56900292Experimental evolution yields hundreds of mutations in a functional viral genome
Q36948120Experimental observations of rapid Maize streak virus evolution reveal a strand-specific nucleotide substitution bias
Q22122004Fitness and its role in evolutionary genetics
Q51141857Fitness benefits of low infectivity in a spatially structured population of bacteriophages.
Q41810453Fixation probabilities when generation times are variable: the burst death model.
Q41850470Fixation probability favors increased fecundity over reduced generation time
Q41787576Fixation probability for lytic viruses: the attachment-lysis model
Q35077412From resistance to stimulation: the evolution of a virus in the presence of a dominant lethal inhibitory scaffolding protein
Q24618245Generating a synthetic genome by whole genome assembly: phiX174 bacteriophage from synthetic oligonucleotides
Q34614487Genetic architecture of thermal adaptation in Escherichia coli
Q36873735Genetic basis of evolutionary adaptation by Escherichia coli to stressful cycles of freezing, thawing and growth
Q40238692Genetic hurdles limit the arms race between Prochlorococcus and the T7-like podoviruses infecting them
Q31172404Genetic variation in clones of Pseudomonas pseudoalcaligenes after ten months of selection in different thermal environments in the laboratory
Q28651650Genome dynamics during experimental evolution
Q33955342Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse
Q34615784Genomic changes in nucleotide and dinucleotide frequencies in Pasteurella multocida cultured under high temperature
Q36451882Genomic evolution during a 10,000-generation experiment with bacteria
Q28082330Genomic investigations of evolutionary dynamics and epistasis in microbial evolution experiments
Q21144908Genomics of adaptation during experimental evolution of the opportunistic pathogen Pseudomonas aeruginosa
Q28703571Genotypic but not phenotypic historical contingency revealed by viral experimental evolution
Q40015135High-resolution mapping of evolutionary trajectories in a phage
Q34303457Horizontal gene transfer and the evolution of microvirid coliphage genomes
Q53753169How could fully scaled carps appear in natural waters in Madagascar?
Q33521105Identification and dynamics of a beneficial mutation in a long-term evolution experiment with Escherichia coli
Q34098121Impact of host cell line adaptation on quasispecies composition and glycosylation of influenza A virus hemagglutinin
Q28709417Improved use of a public good selects for the evolution of undifferentiated multicellularity
Q28252974In vivo continuous directed evolution
Q93047512Inactivation of a Mismatch-Repair System Diversifies Genotypic Landscape of Escherichia coli During Adaptive Laboratory Evolution
Q90068229Influenza Viruses in Mice: Deep Sequencing Analysis of Serial Passage and Effects of Sialic Acid Structural Variation
Q52593231Introduction of viral haemorrhagic septicaemia virus (VHSV) to freshwater cultured rainbow trout is followed by bursts of adaptive evolution.
Q34570839Long-term experimental evolution in Escherichia coli. XII. DNA topology as a key target of selection
Q34431559Long-term experimental evolution in Escherichia coli. XIII. Phylogenetic history of a balanced polymorphism
Q40567914Love the one you're with: replicate viral adaptations converge on the same phenotypic change
Q42714601Lysis timing and bacteriophage fitness
Q38521229Methods for the directed evolution of proteins
Q36470571Microarray analysis of replicate populations selected against a wing-shape correlation in Drosophila melanogaster
Q34305227Microviridae, a family divided: isolation, characterization, and genome sequence of phiMH2K, a bacteriophage of the obligate intracellular parasitic bacterium Bdellovibrio bacteriovorus
Q42549620Models of experimental evolution: the role of genetic chance and selective necessity.
Q27473380Molecular Clocks and the Puzzle of RNA Virus Origins
Q34616146Molecular basis of adaptive convergence in experimental populations of RNA viruses.
Q42205511Multiple genetic pathways to similar fitness limits during viral adaptation to a new host
Q38711741Mutational biases influence parallel adaptation
Q22065913Mutational fitness effects in RNA and single-stranded DNA viruses: common patterns revealed by site-directed mutagenesis studies
Q90020522Mutations in the H7 HA and PB1 genes of avian influenza a viruses increase viral pathogenicity and contact transmission in guinea pigs
Q38786690Mutations of intermediate effect are responsible for adaptation in evolving Pseudomonas fluorescens populations
Q33328471Optimal foraging predicts the ecology but not the evolution of host specialization in bacteriophages
Q34171913Parallel changes in gene expression after 20,000 generations of evolution in Escherichiacoli
Q93101105Parallel evolution of HIV-1 in a long-term experiment
Q37052314Parallel genetic evolution within and between bacteriophage species of varying degrees of divergence
Q28757842Parallel genotypic adaptation: when evolution repeats itself
Q36240827Pattern of mutation in the genome of influenza A virus on adaptation to increased virulence in the mouse lung: identification of functional themes
Q42651561Perceiving molecular evolution processes in Escherichia coli by comprehensive metabolite and gene expression profiling
Q34587807Pleiotropic costs of niche expansion in the RNA bacteriophage phi 6.
Q37260647Polymorphic genes of major effect: consequences for variation, selection and evolution in Arabidopsis thaliana.
Q30992820Positive selection at high temperature reduces gene transcription in the bacteriophage ϕX174.
Q28742643Profile of David M. Hillis. Interview by Sujata Gupta
Q34613893Profiles of adaptation in two similar viruses
Q30829788Quantifying organismal complexity using a population genetic approach
Q35863160Rapid Increase in frequency of gene copy-number variants during experimental evolution in Caenorhabditis elegans
Q28728760Real time forecasting of near-future evolution
Q28607370Reverse evolution leads to genotypic incompatibility despite functional and active site convergence
Q80896717Roles of adaptation, chance and history in the evolution of the dinoflagellate Prorocentrum triestinum
Q33723498SINEs of the perfect character
Q47378055Selecting among three basic fitness landscape models: Additive, multiplicative and stickbreaking
Q34638096Selection affects genes involved in replication during long-term evolution in experimental populations of the bacteriophage φX174
Q36278215Slow fitness recovery in a codon-modified viral genome
Q42490196Some consequences of demographic stochasticity in population genetics
Q34645940Space, time, and host evolution facilitate coexistence of competing bacteriophages: theory and experiment
Q35748281Stickbreaking: a novel fitness landscape model that harbors epistasis and is consistent with commonly observed patterns of adaptive evolution
Q47260262Structural changes of tailless bacteriophage ΦX174 during penetration of bacterial cell walls
Q36429821Synergistic Pleiotropy Overrides the Costs of Complexity in Viral Adaptation
Q35383202Tempo and mode of plant RNA virus escape from RNA interference-mediated resistance
Q34694847Tests of parallel molecular evolution in a long-term experiment with Escherichia coli
Q38740160The Evolutionary Pathway to Virulence of an RNA Virus
Q35675296The Molecular and Genetic Basis of Repeatable Coevolution between Escherichia coli and Bacteriophage T3 in a Laboratory Microcosm
Q37625859The adaptive potential of hybridization demonstrated with bacteriophages
Q34399491The consistency of beneficial fitness effects of mutations across diverse genetic backgrounds
Q37399576The dynamics of adaptation on correlated fitness landscapes
Q27004307The evolution and genetics of virus host shifts
Q37948275The evolution of endogenous viral elements
Q37229521The fixation probability of beneficial mutations
Q38150710The genetic causes of convergent evolution
Q37353497The genetics of adaptation for eight microvirid bacteriophages
Q35095531The impact of spatial structure on viral genomic diversity generated during adaptation to thermal stress
Q35697519The population genetics and evolutionary epidemiology of RNA viruses
Q42069586The population genomics of repeated evolution in the blind cavefish Astyanax mexicanus
Q26864257The spectrum of adaptive mutations in experimental evolution
Q30352150The viral polymerase mediates adaptation of an avian influenza virus to a mammalian host.
Q40168282Time-Sampled Population Sequencing Reveals the Interplay of Selection and Genetic Drift in Experimental Evolution of Potato Virus Y.
Q92463414Transcript degradation and codon usage regulate gene expression in a lytic phage
Q34588639Variable pleiotropic effects from mutations at the same locus hamper prediction of fitness from a fitness component
Q37596928Vesicular stomatitis virus evolution during alternation between persistent infection in insect cells and acute infection in mammalian cells is dominated by the persistence phase
Q37410676Viral adaptation to an antiviral protein enhances the fitness level to above that of the uninhibited wild type
Q37512778ϕX174 Procapsid Assembly: Effects of an Inhibitory External Scaffolding Protein and Resistant Coat Proteins In Vitro

Search more.