Transformation of natural genetic variation into Haemophilus influenzae genomes

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Transformation of natural genetic variation into Haemophilus influenzae genomes is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PPAT.1002151
P932PMC publication ID3145789
P698PubMed publication ID21829353
P5875ResearchGate publication ID51559666

P2093author name stringIra M Hall
Rosemary J Redfield
Joshua Chang Mell
Svetlana Shumilina
P2860cites workGenomic Sequence of an Otitis Media Isolate of Nontypeable Haemophilus influenzae: Comparative Study with H. influenzae Serotype d, Strain KW20Q22065451
Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformationQ24548990
Recombinant human DNase I reduces the viscosity of cystic fibrosis sputumQ24556580
Accurate whole human genome sequencing using reversible terminator chemistryQ24641887
Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteriaQ24643432
Studies on transformations of Hemophilus influenzae. I. CompetenceQ24672097
Versatile and open software for comparing large genomesQ24807126
Hyper-recombination, diversity, and antibiotic resistance in pneumococcus.Q51821002
Horizontal genetic exchange, evolution, and spread of antibiotic resistance in bacteriaQ57707333
Diversity and sharing of Haemophilus influenzae strains colonizing healthy children attending day-care centersQ58484109
Initial steps in Haemophilus influenzae transformation. Donor DNA binding in the com10 mutantQ68800306
Insertions, deletions and mismatches in heteroduplex DNA made by recA proteinQ70179308
Frequency and distribution of DNA uptake signal sequences in the Haemophilus influenzae Rd genomeQ71703230
Extensive variation in natural competence in Haemophilus influenzaeQ83393174
The ins and outs of DNA transfer in bacteria.Q36328634
The impact of the neisserial DNA uptake sequences on genome evolution and stabilityQ36678612
High genetic diversity of nontypeable Haemophilus influenzae isolates from two children attending a day care centerQ36957862
Processing of donor DNA during Haemophilus influenzae transformation: analysis using a model plasmid systemQ37690016
Impact of recombination on bacterial evolutionQ37745973
Addition, deletion, and substitution of long nonhomologous deoxyribonucleic acid segments by genetic transformation of Haemophilus influenzaeQ39971282
An alternative DNA structure is necessary for pilin antigenic variation in Neisseria gonorrhoeaeQ42081550
GenomeMatcher: a graphical user interface for DNA sequence comparisonQ42199727
Characterization of Helicobacter pylori factors that control transformation frequency and integration length during inter-strain DNA recombinationQ42715717
Sexual isolation in Acinetobacter baylyi is locus-specific and varies 10,000-fold over the genomeQ43067321
High rates of recombination in otitis media isolates of non-typeable Haemophilus influenzaeQ43067808
DNA transformation leads to pilin antigenic variation in Neisseria gonorrhoeaeQ46557180
Frequent interspecific genetic exchange between commensal Neisseriae and Neisseria meningitidisQ47854732
Capsule loss in H. influenzae type b occurs by recombination-mediated disruption of a gene essential for polysaccharide exportQ48324102
Whole-genome random sequencing and assembly of Haemophilus influenzae RdQ27860765
The Sequence Alignment/Map format and SAMtoolsQ27860966
Using galaxy to perform large-scale interactive data analysesQ28277397
Transformation of Streptococcus pneumoniae relies on DprA‐ and RecA‐dependent protection of incoming DNA single strandsQ28485209
Fast and accurate long-read alignment with Burrows-Wheeler transformQ29547193
Mauve: multiple alignment of conserved genomic sequence with rearrangementsQ29547292
Rapid pneumococcal evolution in response to clinical interventionsQ29616646
Composite system mediates two-step DNA uptake into Helicobacter pyloriQ30493221
Population genetics of microbial pathogens estimated from multilocus sequence typing (MLST) dataQ31033056
Evolution of competence and DNA uptake specificity in the Pasteurellaceae.Q33260272
Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strainsQ33286770
Mosaic DNA imports with interspersions of recipient sequence after natural transformation of Helicobacter pyloriQ33386812
Natural transformation of helicobacter pylori involves the integration of short DNA fragments interrupted by gaps of variable sizeQ33417645
Tracing the evolution of competence in Haemophilus influenzaeQ33466005
Genomic fluidity: an integrative view of gene diversity within microbial populationsQ33792686
Molecular basis of increased serum resistance among pulmonary isolates of non-typeable Haemophilus influenzaeQ33799150
Homeologous recombination and mismatch repair during transformation in Streptococcus pneumoniae: saturation of the Hex mismatch repair systemQ33883002
RecA-mediated strand exchange traverses substitutional heterologies more easily than deletions or insertionsQ33939557
Transduction, restriction and recombination patterns in Escherichia coliQ33964276
The log-linear relationship between sexual isolation and sequence divergence in Bacillus transformation is robustQ33965471
Serum resistance in an invasive, nontypeable Haemophilus influenzae strainQ34005857
Relating biochemistry to biology: how the recombinational repair function of RecA protein is manifested in its molecular propertiesQ34060917
genoPlotR: comparative gene and genome visualization in RQ34110403
Sequence-specific DNA uptake in Haemophilus transformationQ34166440
Recombination and the population structures of bacterial pathogensQ34360825
Inference of homologous recombination in bacteria using whole-genome sequencesQ34387014
The microbial pan-genomeQ34453982
Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequencesQ34588929
Mechanism and control of interspecies recombination in Escherichia coli. I. Mismatch repair, methylation, recombination and replication functions.Q34605476
General methods for culturing Haemophilus influenzaeQ34955418
Transformation of Haemophilus influenzaeQ34955431
Bacterial ‘competence’ genes: signatures of active transformation, or only remnants?Q35111603
Ampicillin-resistant non-beta-lactamase-producing Haemophilus influenzae in Spain: recent emergence of clonal isolates with increased resistance to cefotaxime and cefixime.Q35878865
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenomeQ36314754
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P921main subjectgenetic variationQ349856
Haemophilus influenzaeQ1141979
P304page(s)e1002151
P577publication date2011-07-28
P1433published inPLOS PathogensQ283209
P1476titleTransformation of natural genetic variation into Haemophilus influenzae genomes
P478volume7

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cites work (P2860)
Q91718653A genomic view of experimental intraspecies and interspecies transformation of a rifampicin-resistance allele into Neisseria meningitidis
Q34311569A high-resolution view of genome-wide pneumococcal transformation
Q48133871Analysis of bacterial genomes from an evolution experiment with horizontal gene transfer shows that recombination can sometimes overwhelm selection
Q57150638Antagonistic Pleiotropy in the Bifunctional Surface Protein FadL (OmpP1) during Adaptation of Haemophilus influenzae to Chronic Lung Infection Associated with Chronic Obstructive Pulmonary Disease
Q50281331Basic Characterization of Natural Transformation in a Highly Transformable Haemophilus parasuis Strain SC1401.
Q31161151Characterization of nontypable Haemophilus influenzae isolates recovered from adult patients with underlying chronic lung disease reveals genotypic and phenotypic traits associated with persistent infection.
Q36173461Clusterflock: a flocking algorithm for isolating congruent phylogenomic datasets
Q57753704ComM is a hexameric helicase that promotes branch migration during natural transformation in diverse Gram-negative species
Q92148989Comparative genomic analysis identifies X-factor (haemin)-independent Haemophilus haemolyticus: a formal re-classification of 'Haemophilus intermedius'
Q37592224Comparative genomic analysis reveals distinct genotypic features of the emerging pathogen Haemophilus influenzae type f.
Q41688772Conservation and Recombination in the Genome Sequence of Haemophilus influenzae Type f WAPHL1.
Q34832242Design and validation of a supragenome array for determination of the genomic content of Haemophilus influenzae isolates
Q27686958Detecting rare gene transfer events in bacterial populations
Q21092704Distributive conjugal transfer in mycobacteria generates progeny with meiotic-like genome-wide mosaicism, allowing mapping of a mating identity locus
Q41451073Effects of DNA size on transformation and recombination efficiencies in Xylella fastidiosa
Q55447630Evolution via recombination: Cell-to-cell contact facilitates larger recombination events in Streptococcus pneumoniae.
Q33761714Extensive cotransformation of natural variation into chromosomes of naturally competent Haemophilus influenzae
Q28483925Generation of Leishmania hybrids by whole genomic DNA transformation
Q84788565Genome watch: Natural transformers
Q38324659Genomic analyses of DNA transformation and penicillin resistance in Streptococcus pneumoniae clinical isolates.
Q56884991Identification and characterization of a restriction-modification enzyme reducing conjugation efficiency in using a co-transformation method
Q36159735Inferring Speciation Processes from Patterns of Natural Variation in Microbial Genomes
Q42109300Interspecies transfer of the penicillin-binding protein 3-encoding gene ftsI between Haemophilus influenzae and Haemophilus haemolyticus can confer reduced susceptibility to β-lactam antimicrobial agents.
Q34486662Investigations into genome diversity of Haemophilus influenzae using whole genome sequencing of clinical isolates and laboratory transformants
Q41126069Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities
Q38818424Metabolic competition as a driver of bacterial population structure
Q38583870Microbial Speciation
Q28658994Multilocus sequence typing and ftsI sequencing: a powerful tool for surveillance of penicillin-binding protein 3-mediated beta-lactam resistance in nontypeable Haemophilus influenzae
Q37713204Natural competence and the evolution of DNA uptake specificity
Q34293002Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species.
Q26830951Ordering microbial diversity into ecologically and genetically cohesive units
Q27013056The cell pole: the site of cross talk between the DNA uptake and genetic recombination machinery
Q57796116The return of Pfeiffer’s bacillus: Rising incidence of ampicillin resistance in Haemophilus influenzae
Q36002097Transformed Recombinant Enrichment Profiling Rapidly Identifies HMW1 as an Intracellular Invasion Locus in Haemophilus influenza
Q43245319Various pathways leading to the acquisition of antibiotic resistance by natural transformation

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