| scholarly article | Q13442814 |
| P50 | author | Jörg Soppa | Q42393991 |
| P2093 | author name string | Jörg Soppa | |
| P2860 | cites work | A novel mechanism for translation initiation operates in haloarchaea. | Q51827031 |
| Global protein-level responses of Halobacterium salinarum NRC-1 to prolonged changes in external sodium chloride concentrations. | Q51830077 | ||
| Effect of proteasome inhibitor clasto-lactacystin-beta-lactone on the proteome of the haloarchaeon Haloferax volcanii. | Q53543984 | ||
| Interaction of transcription activator GvpE with TATA-box-binding proteins of Halobacterium salinarum. | Q54392635 | ||
| The construction of systematic in-frame, single-gene knockout mutant collection in Escherichia coli K-12. | Q54424353 | ||
| Optimized generation of vectors for the construction of Haloferax volcanii deletion mutants. | Q54527044 | ||
| Protein N-glycosylation in Archaea: defining Haloferax volcanii genes involved in S-layer glycoprotein glycosylation. | Q54597832 | ||
| RecA family proteins in archaea: RadA and its cousins. | Q54773997 | ||
| Detailed physical map and set of overlapping clones covering the genome of the archaebacterium Haloferax volcanii DS2 | Q58487830 | ||
| Bioinformatic prediction and experimental verification of sRNAs in the haloarchaeonHaloferax volcanii | Q59891132 | ||
| The archaeal Xpf/Mus81/FANCM homolog Hef and the Holliday junction resolvase Hjc define alternative pathways that are essential for cell viability in Haloferax volcanii | Q60659475 | ||
| Trizol-based method for sample preparation and isoelectric focusing of halophilic proteins | Q43019563 | ||
| The tatC gene cluster is essential for viability in halophilic archaea. | Q43019593 | ||
| Identification of two tRNA thiolation genes required for cell growth at extremely high temperatures | Q43019825 | ||
| All three chaperonin genes in the archaeon Haloferax volcanii are individually dispensable. | Q43021129 | ||
| GvpD-induced breakdown of the transcriptional activator GvpE of halophilic archaea requires a functional p-loop and an arginine-rich region of GvpD. | Q43022363 | ||
| Construction of composite transposons for halophilic Archaea. | Q43022577 | ||
| The 2-oxoacid dehydrogenase multienzyme complex of Haloferax volcanii | Q43022812 | ||
| Three 2-oxoacid dehydrogenase operons in Haloferax volcanii: expression, deletion mutants and evolution | Q43023321 | ||
| Characterization of a tightly controlled promoter of the halophilic archaeon Haloferax volcanii and its use in the analysis of the essential cct1 gene | Q43023536 | ||
| Anaerobiosis inhibits gas vesicle formation in halophilic Archaea | Q43025726 | ||
| A 2-oxoacid dehydrogenase complex of Haloferax volcanii is essential for growth on isoleucine but not on other branched-chain amino acids | Q43027818 | ||
| Different glycosyltransferases are involved in lipid glycosylation and protein N-glycosylation in the halophilic archaeon Haloferax volcanii. | Q43028766 | ||
| Regulatory RNAs in Haloferax volcanii | Q43030235 | ||
| Phenotyping in the archaea: optimization of growth parameters and analysis of mutants of Haloferax volcanii | Q43031763 | ||
| Characterization of a Haloferax volcanii member of the enolase superfamily: deletion mutant construction, expression analysis, and transcriptome comparison | Q43706557 | ||
| Homodirectional changes in transcriptome composition and mRNA translation induced by rapamycin and heat shock | Q44649321 | ||
| Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana | Q46579204 | ||
| Haloferax volcanii twin-arginine translocation substates include secreted soluble, C-terminally anchored and lipoproteins | Q46877032 | ||
| Interactions of RadB, a DNA repair protein in archaea, with DNA and ATP. | Q46974708 | ||
| Identification of two origins of replication in the single chromosome of the archaeon Sulfolobus solfataricus | Q47270717 | ||
| GvpE- and GvpD-mediated transcription regulation of the p-gvp genes encoding gas vesicles in Halobacterium salinarum | Q47376776 | ||
| Radiation-induced changes in gene expression involve recruitment of existing messenger RNAs to and away from polysomes | Q48681530 | ||
| Benjamin Elazari Volcani (1915-1999): sixty-three years of studies of the microbiology of the Dead Sea. | Q48799155 | ||
| Molecular signature of hypersaline adaptation: insights from genome and proteome composition of halophilic prokaryotes | Q21128662 | ||
| The complete genome sequence of Haloferax volcanii DS2, a model archaeon | Q21562676 | ||
| Evolution in the laboratory: The genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1 | Q22162489 | ||
| Complete reconstitution of the human coenzyme A biosynthetic pathway via comparative genomics | Q24292910 | ||
| Growth kinetics of extremely halophilic archaea (family halobacteriaceae) as revealed by arrhenius plots | Q24557462 | ||
| Discovery and characterization of an amidinotransferase involved in the modification of archaeal tRNA | Q24633984 | ||
| Essential Bacillus subtilis genes | Q24681292 | ||
| The UCSC Archaeal Genome Browser | Q25256865 | ||
| Circularization of mRNA by eukaryotic translation initiation factors | Q28279463 | ||
| The mechanism of DNA transfer in the mating system of an archaebacterium | Q28280325 | ||
| From genomes to function: haloarchaea as model organisms | Q28300154 | ||
| Genetic and physical mapping of DNA replication origins in Haloferax volcanii | Q28469214 | ||
| Natural competence in the hyperthermophilic archaeon Pyrococcus furiosus facilitates genetic manipulation: construction of markerless deletions of genes encoding the two cytoplasmic hydrogenases | Q28741536 | ||
| Association of the yeast poly(A) tail binding protein with translation initiation factor eIF-4G | Q29620263 | ||
| Genetic identification of three ABC transporters as essential elements for nitrate respiration in Haloferax volcanii. | Q30747966 | ||
| Genome-wide analysis of growth phase-dependent translational and transcriptional regulation in halophilic archaea. | Q30838193 | ||
| Experimental characterization of Cis-acting elements important for translation and transcription in halophilic archaea | Q30839855 | ||
| Construction and usage of a onefold-coverage shotgun DNA microarray to characterize the metabolism of the archaeon Haloferax volcanii. | Q30932558 | ||
| Genetic evidence for a novel thymidylate synthase in the halophilic archaeon Halobacterium salinarum and in Campylobacter jejuni | Q31118080 | ||
| Genome information management and integrated data analysis with HaloLex. | Q31161033 | ||
| The membrane proteome of Halobacterium salinarum | Q33210360 | ||
| Quantitative profiling of the membrane proteome in a halophilic archaeon | Q33248096 | ||
| Regulated polyploidy in halophilic archaea | Q33267353 | ||
| The low molecular weight proteome of Halobacterium salinarum | Q33275791 | ||
| Rescuing yeast mutants with human genes | Q33294217 | ||
| Regulation of translation in haloarchaea: 5'- and 3'-UTRs are essential and have to functionally interact in vivo | Q33408815 | ||
| Small RNAs in haloarchaea: identification, differential expression and biological function | Q33424292 | ||
| Chapter 7. Cloning and analysis of natural product pathways | Q33431522 | ||
| Systems analysis of bioenergetics and growth of the extreme halophile Halobacterium salinarum | Q33436246 | ||
| Mre11-Rad50 promotes rapid repair of DNA damage in the polyploid archaeon Haloferax volcanii by restraining homologous recombination | Q33480948 | ||
| Integration and visualization of systems biology data in context of the genome | Q33636132 | ||
| The Archaeal Lsm Protein Binds to Small RNAs | Q33688009 | ||
| Three replication origins in Sulfolobus species: synchronous initiation of chromosome replication and asynchronous termination | Q33782439 | ||
| Towards a systems approach in the genetic analysis of archaea: Accelerating mutant construction and phenotypic analysis in Haloferax volcanii | Q33793214 | ||
| Structural model of the gas vesicle protein GvpA and analysis of GvpA mutants in vivo | Q33889895 | ||
| Haloferax volcanii flagella are required for motility but are not involved in PibD-dependent surface adhesion. | Q33983376 | ||
| Mutational and bioinformatic analysis of haloarchaeal lipobox-containing proteins. | Q34155679 | ||
| Ploidy and gene conversion in Archaea | Q34160735 | ||
| Archaeal Ubiquitin-Like Proteins: Functional Versatility and Putative Ancestral Involvement in tRNA Modification Revealed by Comparative Genomic Analysis | Q34170033 | ||
| In vivo analysis of an essential archaeal signal recognition particle in its native host | Q34313240 | ||
| Characterization of pHV2 from Halobacterium volcanii and its use in demonstrating transformation of an archaebacterium | Q34372391 | ||
| Archaeal genetics - the third way. | Q34381254 | ||
| Development of a gene knockout system for the halophilic archaeon Haloferax volcanii by use of the pyrE gene | Q34513433 | ||
| Prokaryotic utilization of the twin-arginine translocation pathway: a genomic survey | Q34514843 | ||
| Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation | Q34583930 | ||
| A mechanism of translational repression by competition of Paip2 with eIF4G for poly(A) binding protein (PABP) binding | Q34687007 | ||
| E1- and ubiquitin-like proteins provide a direct link between protein conjugation and sulfur transfer in archaea | Q34693707 | ||
| Posttranslational modification of the 20S proteasomal proteins of the archaeon Haloferax volcanii | Q35130201 | ||
| Fermentative arginine degradation in Halobacterium salinarium (formerly Halobacterium halobium): genes, gene products, and transcripts of the arcRACB gene cluster | Q35611100 | ||
| Translocation of proteins across archaeal cytoplasmic membranes | Q35671846 | ||
| An unusual pattern of spontaneous mutations recovered in the halophilic archaeon Haloferax volcanii | Q35844885 | ||
| Genetic technologies for Archaea | Q36300703 | ||
| Genetic and proteomic analyses of a proteasome-activating nucleotidase A mutant of the haloarchaeon Haloferax volcanii | Q36422284 | ||
| A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1. | Q36534931 | ||
| Proteomic analysis of Haloferax volcanii reveals salinity-mediated regulation of the stress response protein PspA. | Q36761949 | ||
| Characterization of the distal promoter element of halobacteria in vivo using saturation mutagenesis and selection | Q36810214 | ||
| RNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes | Q36975406 | ||
| Genomics and functional genomics with haloarchaea. | Q37169097 | ||
| A Gateway platform for functional genomics in Haloferax volcanii: deletion of three tRNA modification genes. | Q37202326 | ||
| Identification of the polyhydroxyalkanoate (PHA)-specific acetoacetyl coenzyme A reductase among multiple FabG paralogs in Haloarcula hispanica and reconstruction of the PHA biosynthetic pathway in Haloferax volcanii | Q37365266 | ||
| The haloarchaeal chromosome replication machinery | Q37368257 | ||
| Industrial and environmental applications of halophilic microorganisms | Q37775945 | ||
| Metabolomics: An Integral Technique in Systems Biology | Q37810243 | ||
| Model organisms for genetics in the domain Archaea: methanogens, halophiles, Thermococcales and Sulfolobales | Q37832278 | ||
| Biosynthesis and function of tRNA modifications in Archaea | Q37862455 | ||
| Global and specific translational control by rapamycin in T cells uncovered by microarrays and proteomics | Q38290355 | ||
| Global and specific translational regulation in the genomic response of Saccharomyces cerevisiae to a rapid transfer from a fermentable to a nonfermentable carbon source | Q39457762 | ||
| Improved strains and plasmid vectors for conditional overexpression of His-tagged proteins in Haloferax volcanii | Q39606788 | ||
| Functional role for a 2-oxo acid dehydrogenase in the halophilic archaeon Haloferax volcanii. | Q39679197 | ||
| Genetic and biochemical analysis of the twin-arginine translocation pathway in halophilic archaea | Q39892264 | ||
| Genetic transfer in Halobacterium volcanii. | Q39980511 | ||
| Shuttle vector-based transformation system for Pyrococcus furiosus | Q40527205 | ||
| Development of additional selectable markers for the halophilic archaeon Haloferax volcanii based on the leuB and trpA genes | Q40604361 | ||
| Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii | Q40620950 | ||
| Analysis of proteasome-dependent proteolysis in Haloferax volcanii cells, using short-lived green fluorescent proteins | Q40622148 | ||
| Identification of residues important for the activity of Haloferax volcanii AglD, a component of the archaeal N-glycosylation pathway. | Q40785383 | ||
| Proteasomal components required for cell growth and stress responses in the haloarchaeon Haloferax volcanii | Q41367038 | ||
| The N-terminal penultimate residue of 20S proteasome alpha1 influences its N(alpha) acetylation and protein levels as well as growth rate and stress responses of Haloferax volcanii | Q41367908 | ||
| Genetic evidence for the importance of protein acetylation and protein deacetylation in the halophilic archaeon Haloferax volcanii | Q41823639 | ||
| SRP19 is a dispensable component of the signal recognition particle in Archaea. | Q41895184 | ||
| Shotgun proteomics of the haloarchaeon Haloferax volcanii | Q42007412 | ||
| D-xylose degradation pathway in the halophilic archaeon Haloferax volcanii | Q42026791 | ||
| Recombinant production of Zymomonas mobilis pyruvate decarboxylase in the haloarchaeon Haloferax volcanii | Q42027605 | ||
| Towards glycoengineering in archaea: replacement of Haloferax volcanii AglD with homologous glycosyltransferases from other halophilic archaea. | Q42124322 | ||
| Glyco-engineering in Archaea: differential N-glycosylation of the S-layer glycoprotein in a transformed Haloferax volcanii strain. | Q42264604 | ||
| AglJ adds the first sugar of the N-linked pentasaccharide decorating the Haloferax volcanii S-layer glycoprotein | Q42410773 | ||
| Sequence and expression of a halobacterial beta-galactosidase gene | Q42623833 | ||
| 2-Oxoacid dehydrogenase multienzyme complexes in the halophilic Archaea? Gene sequences and protein structural predictions | Q42627137 | ||
| Dihydrofolate reductase of the extremely halophilic archaebacterium Halobacterium volcanii. The enzyme and its coding gene. | Q42640589 | ||
| Halobacterium volcanii spec. nov., a Dead Sea halobacterium with a moderate salt requirement | Q43016121 | ||
| An alternative pathway for reduced folate biosynthesis in bacteria and halophilic archaea | Q43016764 | ||
| Dihydrolipoamide dehydrogenase from the halophilic archaebacterium Haloferax volcanii: characterization and N-terminal sequence. | Q43016791 | ||
| Improvement of two-dimensional gel electrophoresis proteome maps of the haloarchaeon Haloferax volcanii | Q43016942 | ||
| Transformation methods for halophilic archaebacteria | Q43018042 | ||
| P275 | copyright license | Creative Commons Attribution 3.0 Unported | Q14947546 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P921 | main subject | functional genomics | Q1068690 |
| Haloferax volcanii | Q16982678 | ||
| P304 | page(s) | 602408 | |
| P577 | publication date | 2011-11-30 | |
| P1433 | published in | Archaea | Q15749211 |
| P1476 | title | Functional genomic and advanced genetic studies reveal novel insights into the metabolism, regulation, and biology of Haloferax volcanii | |
| P478 | volume | 2011 |
| Q38249994 | A simple technique to improve the resolution of membrane acidic proteins of the haloarchaeon Haloferax volcanii by 2D electrophoresis |
| Q38164814 | Functional implications of ribosomal RNA methylation in response to environmental stress. |
| Q30017423 | Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq) |
| Q41229267 | High throughput sequencing reveals a plethora of small RNAs including tRNA derived fragments in Haloferax volcanii. |
| Q36291927 | Overview of the genetic tools in the Archaea |
| Q34505487 | Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response |
| Q42917474 | The effects of extremes of pH on the growth and transcriptomic profiles of three haloarchaea |
| Q43026031 | Transcriptional regulation of dimethyl sulfoxide respiration in a haloarchaeon, Haloferax volcanii |
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