Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines

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Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1051649973
P356DOI10.1186/1741-7007-10-3
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/1741-7007-10-3
P932PMC publication ID3313882
P698PubMed publication ID22277161
P5875ResearchGate publication ID221777283

P50authorChunming XuQ58879271
P2093author name stringWei Huang
Bo Zhu
Na Zhao
Bao Liu
Fangpu Han
Jianhua Guo
Bao Qi
Huakun Zhang
Xiaofang Zhong
Jinsong Pang
P2860cites workThe advantages and disadvantages of being polyploidQ22122019
Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium)Q37215199
Evolutionary genetics of genome merger and doubling in plantsQ37317018
Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploidsQ37376096
Genome evolution in allopolyploid wheat--a revolutionary reprogramming followed by gradual changesQ37603878
Homoeologous recombination in allopolyploids: the polyploid ratchetQ37650893
Order out of chaos in the hybrid plant nucleusQ37656911
agriGO: a GO analysis toolkit for the agricultural communityQ38373934
Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomesQ42968076
Transcriptomic changes following recent natural hybridization and allopolyploidy in the salt marsh species Spartina x townsendii and Spartina anglica (Poaceae).Q43995893
Polyploid formation in cotton is not accompanied by rapid genomic changesQ45419148
A yeast hybrid provides insight into the evolution of gene expression regulation.Q46029723
Coordinated and fine-scale control of homoeologous gene expression in allotetraploid cottonQ46098729
Genomic constitution and variation in five partial amphiploids of wheat--Thinopyrum intermedium as revealed by GISH, multicolor GISH and seed storage protein analysisQ47342003
Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina.Q51180823
Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae).Q51188785
Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation.Q51642803
Newly synthesized wheat allohexaploids display progenitor-dependent meiotic stability and aneuploidy but structural genomic additivity.Q54441791
Genetic control of chromosome pairing in wheatQ67501095
Retrotransposons and genomic stability in populations of the young allopolyploid species Spartina anglica C.E. Hubbard (Poaceae)Q74518550
Rapid genomic changes in newly synthesized amphiploids of Triticum and Aegilops. II. Changes in low-copy coding DNA sequencesQ77489554
Effects of reunited diverged regulatory hierarchies in allopolyploids and species hybridsQ79224447
Homoeologous gene silencing in hexaploid wheatQ80086966
Transcriptome shock after interspecific hybridization in senecio is ameliorated by genome duplicationQ80141703
The origin of Triticum spelta and its free-threshing hexaploid relativesQ82111560
Tissue-specific silencing of homoeologs in natural populations of the recent allopolyploid Tragopogon mirusQ84087203
Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploidsQ84508331
Genome evolution in polyploidsQ22122457
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesQ24534395
Altered circadian rhythms regulate growth vigour in hybrids and allopolyploidsQ24647713
Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploidsQ24679271
Mechanisms of genomic rearrangements and gene expression changes in plant polyploidsQ24682689
Numerous and rapid nonstochastic modifications of gene products in newly synthesized Brassica napus allotetraploidsQ24684463
A comparison of normalization methods for high density oligonucleotide array data based on variance and biasQ27860710
Linear models and empirical bayes methods for assessing differential expression in microarray experimentsQ27860758
Polyploidy and genome evolution in plantsQ28238570
Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheatQ28345504
The significance of responses of the genome to challengeQ28913697
Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops-Triticum) groupQ30657840
Genomic changes in synthetic Arabidopsis polyploidsQ30979821
Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolutionQ33328698
Transcriptional analysis of nucleolar dominance in polyploid plants: biased expression/silencing of progenitor rRNA genes is developmentally regulated in BrassicaQ33368062
Genomic expression dominance in allopolyploidsQ33437873
Transcriptional profiling in response to terminal drought stress reveals differential responses along the wheat genomeQ33474176
Comparative transcriptomics in the TriticeaeQ33475233
The role of hybridization in plant speciationQ33477947
Homoeolog-specific transcriptional bias in allopolyploid wheatQ33694957
Genomic and expression plasticity of polyploidyQ33893483
Understanding mechanisms of novel gene expression in polyploidsQ34180932
Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencingQ34532390
Allele-specific, bidirectional silencing of an alcohol dehydrogenase gene in different organs of interspecific diploid cotton hybridsQ34587110
Genomewide nonadditive gene regulation in Arabidopsis allotetraploidsQ34587400
Genetics and geography of wild cereal domestication in the near east.Q34664825
The evolutionary consequences of polyploidyQ34709080
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotypeQ34714961
Genomic clues to the evolutionary success of polyploid plantsQ34779924
Phenotypic and transcriptomic changes associated with potato autopolyploidizationQ35945650
Allopolyploidy--a shaping force in the evolution of wheat genomesQ36064549
Evolution of duplicate gene expression in polyploid and hybrid plantsQ36701858
Genome plasticity a key factor in the success of polyploid wheat under domesticationQ36864536
Nonadditive expression of homoeologous genes is established upon polyploidization in hexaploid wheatQ37117023
P4510describes a project that useslimmaQ112236343
P921main subjectwheatQ15645384
Triticum aestivumQ161098
P304page(s)3
P577publication date2012-01-26
P1433published inBMC BiologyQ2545642
P1476titleGlobal transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines
P478volume10

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cites work (P2860)
Q26809969A criticism of the value of midparent in polyploidization
Q64063323An extracted tetraploid wheat harbouring the BBAA component of common wheat shows anomalous shikimate and sucrose metabolism
Q45230202Asymmetric epigenetic modification and elimination of rDNA sequences by polyploidization in wheat.
Q53137704Characterization and expression patterns of small RNAs in synthesized Brassica hexaploids.
Q33784402Differential transcript profiling alters regulatory gene expression during the development of Gossypium arboreum, G.stocksii and somatic hybrids.
Q33359813Differential transcriptome analysis between Populus and its synthesized allotriploids driven by second-division restitution
Q26809955Doubling down on genomes: polyploidy and crop plants
Q38475267Evolution of the BBAA component of bread wheat during its history at the allohexaploid level
Q53569899Genetic and epigenetic modifications to the BBAA component of common wheat during its evolutionary history at the hexaploid level.
Q38463133Genome-Wide Dosage-Dependent and -Independent Regulation Contributes to Gene Expression and Evolutionary Novelty in Plant Polyploids.
Q60047044Genome-Wide Transcription During Early Wheat Meiosis Is Independent of Synapsis, Ploidy Level, and the Locus
Q26809972Genomic and epigenetic insights into the molecular bases of heterosis
Q53107085Homoeolog expression bias and expression level dominance in allopolyploids.
Q55501019Integrative analysis of genome‐wide lncRNA and mRNA expression in newly synthesized Brassica hexaploids.
Q26809947Making the Bread: Insights from Newly Synthesized Allohexaploid Wheat
Q36197285Multiple mechanisms and challenges for the application of allopolyploidy in plants
Q35146248Patterns of homoeologous gene expression shown by RNA sequencing in hexaploid bread wheat.
Q36653937Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat
Q35083767Polyploidy and the petal transcriptome of Gossypium
Q44577467Prevalence of gene expression additivity in genetically stable wheat allohexaploids
Q46753321Proteomic Changes Between Populus Allotriploids and Diploids Revealed Using an iTRAQ-based Quantitative Approach
Q35569848Regulatory divergence between parental alleles determines gene expression patterns in hybrids
Q38627897Segmental allotetraploidy generates extensive homeologous expression rewiring and phenotypic diversity at the population level in rice.
Q39827817Small RNA changes in synthetic Brassica napus
Q35081187The evolution and adaptive potential of transcriptional variation in sticklebacks--signatures of selection and widespread heritability.
Q36746214The genetic study utility of a hexaploid wheat DH population with non-recombinant A- and B-genomes
Q46659855Transcriptome asymmetry in synthetic and natural allotetraploid wheats, revealed by RNA-sequencing
Q28833742Transcriptome shock invokes disruption of parental expression-conserved genes in tetraploid wheat
Q40485412Transcriptomic changes following synthesis of a Populus full-sib diploid and allotriploid population with different heterozygosities driven by three types of 2n female gamete.
Q30488940expVIP: a Customizable RNA-seq Data Analysis and Visualization Platform.
Q48307892mRNA and Small RNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation of Allopolyploid Heterosis in Nascent Hexaploid Wheat

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