| scholarly article | Q13442814 |
| P356 | DOI | 10.1093/EMBOJ/CDG193 |
| P953 | full work available online at | http://emboj.embopress.org/content/22/9/2234.full.pdf |
| https://europepmc.org/articles/PMC156065 | ||
| https://europepmc.org/articles/PMC156065?pdf=render | ||
| https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1093%2Femboj%2Fcdg193 | ||
| https://doi.org/10.1093/emboj/cdg193 | ||
| https://onlinelibrary.wiley.com/doi/full/10.1093/emboj/cdg193 | ||
| P932 | PMC publication ID | 156065 |
| P698 | PubMed publication ID | 12727889 |
| P5875 | ResearchGate publication ID | 10776976 |
| P2093 | author name string | Arkady Mustaev | |
| Irina Bass | |||
| Vadim Nikiforov | |||
| Ekaterina Sosunova | |||
| Vasily Sosunov | |||
| Alex Goldfarb | |||
| P2860 | cites work | Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution | Q27631276 |
| Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution | Q27631280 | ||
| Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution | Q27638951 | ||
| Structural principles for the inhibition of the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates | Q27748962 | ||
| Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation. | Q29616842 | ||
| A mechanism for all polymerases | Q29618812 | ||
| Magnetic resonance and kinetic studies of the role of the divalent cation activator of RNA polymerase from Escherichia coli | Q33382161 | ||
| Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution. | Q33875224 | ||
| A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription | Q34156990 | ||
| Intrinsic transcript cleavage activity of RNA polymerase | Q34348611 | ||
| The active site of RNA polymerase II participates in transcript cleavage within arrested ternary complexes | Q35679822 | ||
| Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded | Q36021413 | ||
| Elongation factor-dependent transcript shortening by template-engaged RNA polymerase II. | Q36028004 | ||
| Identification of a 3'-->5' exonuclease activity associated with human RNA polymerase II. | Q36077476 | ||
| Modular organization of the catalytic center of RNA polymerase | Q36237766 | ||
| A beta subunit mutation disrupting the catalytic function of Escherichia coli RNA polymerase | Q37546304 | ||
| A structural model of transcription elongation | Q38310043 | ||
| The increment of SII-facilitated transcript cleavage varies dramatically between elongation competent and incompetent RNA polymerase II ternary complexes. | Q38318282 | ||
| Mechanistic studies on deoxyribonucleic acid dependent ribonucleic acid polymerase from Escherichia coli using phosphorothioate analog. 1. Initiation and pyrophosphate exchange reactions | Q40257539 | ||
| Mapping of catalytic residues in the RNA polymerase active center | Q42631731 | ||
| The mechanism of pyrophosphorolysis of RNA by RNA polymerase. Endowment of RNA polymerase with artificial exonuclease activity | Q42848596 | ||
| Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation. | Q43711737 | ||
| Hydrolytic cleavage of nascent RNA in RNA polymerase III ternary transcription complexes. | Q45964542 | ||
| Transcriptional Fidelity and Proofreading by RNA Polymerase II | Q48032922 | ||
| RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA. | Q54564102 | ||
| The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase | Q54567869 | ||
| Histidine-tagged RNA polymerase of Escherichia coli and transcription in solid phase. | Q54596376 | ||
| A non-essential domain of Escherichia coli RNA polymerase required for the action of the termination factor Alc. | Q54633449 | ||
| Recombinant Escherichia coli RNA polymerase: purification of individually overexpressed subunits and in vitro assembly. | Q54647142 | ||
| Transcript cleavage factors from E. coli. | Q54662145 | ||
| Swing-Gate Model of Nucleotide Entry into the RNA Polymerase Active Center | Q61718172 | ||
| Nascent RNA cleavage by purified ternary complexes of vaccinia RNA polymerase | Q72067737 | ||
| On the mechanism of streptolydigin inhibition of Escherichia coli RNA polymerase | Q72125823 | ||
| CONVERSION OF MONO- AND OLIGODEOXYRIBONUCLEOTIDES TO 5-TRIPHOSPHATES | Q78347150 | ||
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 2234-2244 | |
| P577 | publication date | 2003-05-01 | |
| P1433 | published in | The EMBO Journal | Q1278554 |
| P1476 | title | Unified two-metal mechanism of RNA synthesis and degradation by RNA polymerase | |
| P478 | volume | 22 |
| Q55416915 | A Genome-Wide Assay Specifies Only GreA as a Transcription Fidelity Factor in Escherichia coli. |
| Q64285286 | A Viral T7 RNA Polymerase Ratcheting Along DNA With Fidelity Control |
| Q42135745 | A backtrack‐inducing sequence is an essential component of Escherichia coli σ70‐dependent promoter‐proximal pausing |
| Q36337672 | A non-canonical multisubunit RNA polymerase encoded by a giant bacteriophage |
| Q35743341 | A small post-translocation energy bias aids nucleotide selection in T7 RNA polymerase transcription |
| Q34671742 | A two-state model for the dynamics of the pyrophosphate ion release in bacterial RNA polymerase |
| Q36072607 | Activation and reactivation of the RNA polymerase II trigger loop for intrinsic RNA cleavage and catalysis. |
| Q59134924 | Active site closure stabilizes the backtracked state of RNA polymerase |
| Q35689024 | Active-site dynamics in RNA polymerases |
| Q37419132 | Allosteric control of catalysis by the F loop of RNA polymerase |
| Q42591443 | Allosteric control of the RNA polymerase by the elongation factor RfaH |
| Q55717404 | Alternative DNA secondary structure formation affects RNA polymerase II promoter-proximal pausing in human. |
| Q38325658 | Antibiotic streptolydigin requires noncatalytic Mg2+ for binding to RNA polymerase. |
| Q27641834 | Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage |
| Q43149169 | Bacterial global regulators DksA/ppGpp increase fidelity of transcription |
| Q38043849 | Basic mechanism of transcription by RNA polymerase II. |
| Q89717644 | Bayesian inference and comparison of stochastic transcription elongation models |
| Q35946139 | CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition |
| Q33934618 | Central role of the RNA polymerase trigger loop in intrinsic RNA hydrolysis. |
| Q37978672 | Chemistry of Enzymatic ATP Synthesis: An Insight through the Isotope Window |
| Q35909941 | Comparative Study of Cyanobacterial andE. coliRNA Polymerases: Misincorporation, Abortive Transcription, and Dependence on Divalent Cations |
| Q91152206 | Conservative transcription in three steps visualized in a double-stranded RNA virus |
| Q46411708 | Conserved functions of the trigger loop and Gre factors in RNA cleavage by bacterial RNA polymerases. |
| Q33578892 | Control of Transcriptional Fidelity by Active Center Tuning as Derived from RNA Polymerase Endonuclease Reaction* |
| Q41896724 | Controlled interplay between trigger loop and Gre factor in the RNA polymerase active centre |
| Q107343665 | Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading |
| Q27651883 | Crystal Structure of Escherichia coli Rnk, a New RNA Polymerase-Interacting Protein |
| Q64114317 | Determining selection free energetics from nucleotide pre-insertion to insertion in viral T7 RNA polymerase transcription fidelity control |
| Q37714219 | Diffusion of nucleoside triphosphates and role of the entry site to the RNA polymerase II active center |
| Q33841173 | DksA potentiates direct activation of amino acid promoters by ppGpp |
| Q34788277 | Donation of catalytic residues to RNA polymerase active center by transcription factor Gre |
| Q39671202 | Dynamics of pyrophosphate ion release and its coupled trigger loop motion from closed to open state in RNA polymerase II. |
| Q35013133 | Elongation complexes of Thermus thermophilus RNA polymerase that possess distinct translocation conformations |
| Q95301965 | Establishment of an in vitro RNA polymerase transcription system: a new tool to study transcriptional activation in Borrelia burgdorferi |
| Q27667362 | Evolution of Two Modes of Intrinsic RNA Polymerase Transcript Cleavage |
| Q59044499 | Extending the message |
| Q40884923 | Factor-independent transcription pausing caused by recognition of the RNA-DNA hybrid sequence |
| Q42119465 | Functional divergence in the growing family of RNA polymerases |
| Q28493091 | Gene-specific regulation by a transcript cleavage factor: facilitating promoter escape |
| Q51123075 | Gfh factors and NusA cooperate to stimulate transcriptional pausing and termination |
| Q33758347 | Human RNA polymerase II elongation in slow motion: role of the TFIIF RAP74 alpha1 helix in nucleoside triphosphate-driven translocation |
| Q37181838 | Inhibition of a transcriptional pause by RNA anchoring to RNA polymerase |
| Q24644413 | Inhibition of bacterial RNA polymerase by streptolydigin: stabilization of a straight-bridge-helix active-center conformation |
| Q52684422 | Inorganic phosphate, arsenate, and vanadate enhance exonuclease transcript cleavage by RNA polymerase by 2000-fold |
| Q42032775 | Inter-subunit interactions of the Autographa californica M nucleopolyhedrovirus RNA polymerase |
| Q54466769 | Kinetic investigation of Escherichia coli RNA polymerase mutants that influence nucleotide discrimination and transcription fidelity |
| Q38530942 | Lineage-specific variations in the trigger loop modulate RNA proofreading by bacterial RNA polymerases. |
| Q40168887 | Mechanism of NTP Binding to the Active Site of T7 RNA Polymerase Revealed by Free-Energy Simulation |
| Q80146831 | Merging the RNA and DNA worlds |
| Q33396922 | Metal A and metal B sites of nuclear RNA polymerases Pol IV and Pol V are required for siRNA-dependent DNA methylation and gene silencing |
| Q56899639 | Modern mRNA proofreading and repair: clues that the last universal common ancestor possessed an RNA genome? |
| Q38207228 | Molecular basis of transcriptional fidelity and DNA lesion-induced transcriptional mutagenesis |
| Q40333546 | Molecular dynamics simulation study of the "stay or leave" problem for two magnesium ions in gene transcription. |
| Q42618014 | Mutations in RNA Polymerase Bridge Helix and Switch Regions Affect Active-Site Networks and Transcript-Assisted Hydrolysis |
| Q37003230 | New Insight into Metal Ion-Driven Catalysis of Nucleic Acids by Influenza PA-Nter |
| Q38288438 | Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences |
| Q37070626 | PolV(PolIVb) function in RNA-directed DNA methylation requires the conserved active site and an additional plant-specific subunit |
| Q42924286 | RNA Polymerase Backtracking in Gene Regulation and Genome Instability |
| Q35878596 | RNA Transcript 3′-Proximal Sequence Affects Translocation Bias of RNA Polymerase |
| Q38590733 | RNA polymerase II transcriptional fidelity control and its functional interplay with DNA modifications |
| Q37505069 | RNA polymerase active center: the molecular engine of transcription |
| Q33640968 | RNA polymerase elongation factors |
| Q34374702 | Regulation through the RNA polymerase secondary channel. Structural and functional variability of the coiled-coil transcription factors |
| Q42150636 | Role of the RNA polymerase trigger loop in catalysis and pausing. |
| Q35973285 | Selectivity and proofreading both contribute significantly to the fidelity of RNA polymerase III transcription |
| Q57751903 | Source of the Fitness Defect in Rifamycin-Resistant Mycobacterium tuberculosis RNA Polymerase and the Mechanism of Compensation by Mutations in the β' Subunit |
| Q27480973 | Stabilization of Poliovirus Polymerase by NTP Binding and Fingers–Thumb Interactions |
| Q33575135 | Stepwise mechanism for transcription fidelity |
| Q27655672 | Structural Basis of Transcription: Backtracked RNA Polymerase II at 3.4 Angstrom Resolution |
| Q27646096 | Structural basis for substrate loading in bacterial RNA polymerase |
| Q47840596 | Structural basis for the selective incorporation of an artificial nucleotide opposite a DNA adduct by a DNA polymerase |
| Q24678740 | Structural basis for transcription inhibition by tagetitoxin |
| Q34316432 | Structural basis for transcription regulation by alarmone ppGpp. |
| Q27666785 | Structural basis of RNA polymerase II backtracking, arrest and reactivation |
| Q57165514 | Structural basis of mitochondrial transcription |
| Q38043847 | Structural basis of transcription elongation |
| Q34366785 | Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center |
| Q36416676 | Structural perspective on mutations affecting the function of multisubunit RNA polymerases |
| Q51107154 | Structure and Function of RNA Polymerases and the Transcription Machineries |
| Q35669878 | Structure and function of RNA polymerase II. |
| Q27683438 | Structure and function of the initially transcribing RNA polymerase II–TFIIB complex |
| Q41629112 | Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase |
| Q41600063 | Structure of RNA polymerase I transcribing ribosomal DNA genes. |
| Q24644966 | Structure-function studies of the RNA polymerase II elongation complex |
| Q26748917 | The Diversity of Ribonuclease P: Protein and RNA Catalysts with Analogous Biological Functions |
| Q79322491 | The flap domain is required for pause RNA hairpin inhibition of catalysis by RNA polymerase and can modulate intrinsic termination |
| Q24801059 | The highly conserved glutamic acid 791 of Rpb2 is involved in the binding of NTP and Mg(B) in the active center of human RNA polymerase II. |
| Q24814771 | The involvement of the aspartate triad of the active center in all catalytic activities of multisubunit RNA polymerase |
| Q30497423 | The nucleotide addition cycle of RNA polymerase is controlled by two molecular hinges in the Bridge Helix domain |
| Q36043488 | Thinking quantitatively about transcriptional regulation. |
| Q39181973 | Transcription elongation |
| Q43814351 | Transcription termination factor rho prefers catalytically active elongation complexes for releasing RNA. |
| Q24611147 | Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors |
| Q38176888 | Understanding the Molecular Basis of RNA Polymerase II Transcription |
| Q90025192 | Widespread Backtracking by RNA Pol II Is a Major Effector of Gene Activation, 5' Pause Release, Termination, and Transcription Elongation Rate |
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