Growth dependence of conjugation explains limited plasmid invasion in biofilms: an individual-based modelling study

scientific article published in September 2011

Growth dependence of conjugation explains limited plasmid invasion in biofilms: an individual-based modelling study is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1111/J.1462-2920.2011.02535.X
P698PubMed publication ID21906217
P5875ResearchGate publication ID51637726

P50authorBarth F SmetsQ39274431
Jan-Ulrich KreftQ54143137
P2093author name stringBrian V Merkey
Laurent A Lardon
Jose M Seoane
P2860cites workThe evolution of quorum sensing in bacterial biofilmsQ27333799
Mechanisms of, and barriers to, horizontal gene transfer between bacteriaQ28270244
Direct Visualization of Horizontal Gene TransferQ29544159
F-pili dynamics by live-cell imagingQ30440803
Biofilms promote altruismQ31104215
Competition triggers plasmid-mediated enhancement of substrate utilisation in Pseudomonas putidaQ33474827
Conjugal TOL transfer from Pseudomonas putida to Pseudomonas aeruginosa: effects of restriction proficiency, toxicant exposure, cell density ratios, and conjugation detection method on observed transfer efficienciesQ33720153
iDynoMiCS: next-generation individual-based modelling of biofilmsQ33848394
Biofilm, city of microbesQ33899018
Direct observation of extension and retraction of type IV piliQ33948884
Cooperation and conflict in microbial biofilms.Q35612336
Active partitioning of bacterial plasmidsQ35964189
Studying plasmid horizontal transfer in situ: a critical reviewQ36247073
Pattern-oriented modeling of agent-based complex systems: lessons from ecologyQ36311778
Plasmid segregation mechanismsQ36312215
Spatial structure and nutrients promote invasion of IncP-1 plasmids in bacterial populationsQ37019247
Modelling the spatial dynamics of plasmid transfer and persistenceQ37034737
Why is entry exclusion an essential feature of conjugative plasmids?Q37149000
Progress towards understanding the fate of plasmids in bacterial communitiesQ37174799
Patchy distribution of flexible genetic elements in bacterial populations mediates robustness to environmental uncertaintyQ37212266
Mechanisms that contribute to the stable segregation of plasmidsQ38763392
The F pilus of Escherichia coli appears to support stable DNA transfer in the absence of wall-to-wall contact between cellsQ39952193
Particle-based multidimensional multispecies biofilm modelQ40512396
The kinetics of conjugative plasmid transmission: Fit of a simple mass action modelQ41055017
Dynamics of plasmid transfer on surfacesQ41205205
Multi-scale individual-based model of microbial and bioconversion dynamics in aerobic granular sludgeQ43353694
A new extant respirometric assay to estimate intrinsic growth parameters applied to study plasmid metabolic burdenQ45819617
Evidence of DNA transfer through F-pilus channels during Escherichia coli conjugationQ47664798
Kinetics of conjugative transfer: a study of the plasmid pXO16 from Bacillus thuringiensis subsp. israelensisQ47869109
Extensions to modeling aerobic carbon degradation using combined respirometric-titrimetric measurements in view of activated sludge model calibrationQ49053685
A computational model for biofilm-based microbial fuel cells.Q50992317
Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship.Q51924350
A model for bacterial conjugal gene transfer on solid surfaces.Q52017535
Individual-based modelling of biofilms.Q52051890
BacSim, a simulator for individual-based modelling of bacterial colony growth.Q52227664
Estimating the rate of plasmid transfer: an end-point method.Q52469577
An individual-based approach to explain plasmid invasion in bacterial populations.Q53288331
Effect of growth rate on plasmid maintenance by Escherichia coli HB101(pAT153).Q54311423
Loss of the toluene-xylene catabolic genes of TOL plasmid pWW0 during growth of Pseudomonas putida on benzoate is due to a selective growth advantage of 'cured' segregants.Q54380632
A standard protocol for describing individual-based and agent-based modelsQ56032644
Practical identifiability analysis of large environmental simulation modelsQ57380381
P433issue9
P921main subjectbiofilmQ467410
P6104maintained by WikiProjectWikiProject Invasion BiologyQ56241615
P1104number of pages18
P304page(s)2435-2452
P577publication date2011-09-01
P1433published inEnvironmental MicrobiologyQ15752447
P1476titleGrowth dependence of conjugation explains limited plasmid invasion in biofilms: an individual-based modelling study
P478volume13

Reverse relations

cites work (P2860)
Q55119619A Bayesian approach to modelling the impact of hydrodynamic shear stress on biofilm deformation.
Q36041733Advancing microbial sciences by individual-based modelling
Q38528771Bacterial computing with engineered populations
Q56453212Exploiting additive and subtractive patterning for spatially controlled and robust bacterial co-cultures
Q92629783From molecules to multispecies ecosystems: the roles of structure in bacterial biofilms
Q39261722Growth phase-dependent control of R27 conjugation is mediated by the interplay between the plasmid-encoded regulatory circuit TrhR/TrhY-HtdA and the cAMP regulon.
Q50706779Mathematical modelling of antimicrobial resistance in agricultural waste highlights importance of gene transfer rate.
Q27323496Metabolic and demographic feedbacks shape the emergent spatial structure and function of microbial communities
Q38571885Modeling microbial growth and dynamics
Q27315853Multicellular computing using conjugation for wiring
Q36181887Mycelia as a focal point for horizontal gene transfer among soil bacteria
Q41948466Novel assay to measure the plasmid mobilizing potential of mixed microbial communities
Q30416783Novel multiscale modeling tool applied to Pseudomonas aeruginosa biofilm formation
Q33636216Plasmid transfer in biofilms: a perspective on limitations and opportunities
Q38854401Predictive Modeling of a Batch Filter Mating Process.
Q64084333Recent Advances in Anti-virulence Therapeutic Strategies With a Focus on Dismantling Bacterial Membrane Microdomains, Toxin Neutralization, Quorum-Sensing Interference and Biofilm Inhibition
Q34568460Repair rather than segregation of damage is the optimal unicellular aging strategy
Q41916504Speed of invasion of an expanding population by a horizontally transmitted trait.
Q37996597The interconnection between biofilm formation and horizontal gene transfer
Q26998253Towards predictive models of the human gut microbiome
Q33848394iDynoMiCS: next-generation individual-based modelling of biofilms

Search more.