Recombineering: A powerful tool for modification of bacteriophage genomes

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Recombineering: A powerful tool for modification of bacteriophage genomes is …
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scholarly articleQ13442814

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P356DOI10.4161/BACT.18778
P932PMC publication ID3357384
P698PubMed publication ID22666652
P5875ResearchGate publication ID225184941

P50authorGraham HatfullQ64743836
P2093author name stringLaura J Marinelli
Mariana Piuri
P2860cites workExpanding the diversity of mycobacteriophages: insights into genome architecture and evolutionQ21135570
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Phage annealing proteins promote oligonucleotide-directed mutagenesis in Escherichia coli and mouse ES cellsQ24798568
Classification and evolutionary history of the single-strand annealing proteins, RecT, Redbeta, ERF and RAD52Q24805465
The crystal structure of lambda-Gam protein suggests a model for RecBCD inhibitionQ27645165
Mycobacteriophage Lysin B is a novel mycolylarabinogalactan esteraseQ27646315
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR productsQ27860842
Origins of highly mosaic mycobacteriophage genomesQ28198119
Introduction of foreign DNA into mycobacteria using a shuttle phasmidQ28298802
BRED: a simple and powerful tool for constructing mutant and recombinant bacteriophage genomesQ28474337
Fluoromycobacteriophages for rapid, specific, and sensitive antibiotic susceptibility testing of Mycobacterium tuberculosisQ28475057
Specialized transduction: an efficient method for generating marked and unmarked targeted gene disruptions in Mycobacterium tuberculosis, M. bovis BCG and M. smegmatisQ29614369
An efficient recombination system for chromosome engineering in Escherichia coliQ29615038
A new logic for DNA engineering using recombination in Escherichia coliQ29615202
Genetic systems for mycobacteriaQ29620683
Control of phage Bxb1 excision by a novel recombination directionality factorQ33244373
Use of the lambda Red-recombineering method for genetic engineering of Pantoea ananatisQ33434157
Insertional mutagenesis and illegitimate recombination in mycobacteriaQ33595744
Single-stranded heteroduplex intermediates in lambda Red homologous recombinationQ33644920
A second endolysin gene is fully embedded in-frame with the lysA gene of mycobacteriophage Ms6.Q33939117
High efficiency mutagenesis, repair, and engineering of chromosomal DNA using single-stranded oligonucleotidesQ33948878
Interaction between the sbcC gene of Escherichia coli and the gam gene of phage lambdaQ33955773
Annealing vs. invasion in phage lambda recombinationQ33971328
Recombineering using RecTE from Pseudomonas syringaeQ34045936
The origins and ongoing evolution of virusesQ34106581
Phage genomics: small is beautifulQ34109429
The mycobacteriophage Ms6 encodes a chaperone-like protein involved in the endolysin delivery to the peptidoglycan.Q34120707
Enhanced levels of lambda Red-mediated recombinants in mismatch repair mutantsQ34283357
Lambda red recombineering in Escherichia coli occurs through a fully single-stranded intermediate.Q34285766
Recombineering: a powerful new tool for mouse functional genomicsQ34389493
Homologous recombination near and far from DNA breaks: alternative roles and contrasting viewsQ34432225
Lambda red-mediated genetic modification of the insect endosymbiont Sodalis glossinidiusQ34738329
Recombineering: genetic engineering in bacteria using homologous recombinationQ34748892
Genetic engineering using homologous recombinationQ34995474
DNA packaging and the pathway of bacteriophage T4 head assemblyQ35047968
Homologous pairing and strand exchange promoted by the Escherichia coli RecT proteinQ35161576
Recombineering with overlapping single-stranded DNA oligonucleotides: testing a recombination intermediateQ35163354
Oligonucleotide recombination in Gram-negative bacteriaQ36114524
Identification and analysis of recombineering functions from Gram-negative and Gram-positive bacteria and their phagesQ36446432
Conditionally replicating mycobacteriophages: a system for transposon delivery to Mycobacterium tuberculosisQ36603027
Enzymatic construction and selection of bacteriophage G4 mutants with modifications of a DNA secondary structure in the J-F intercistronic regionQ36908760
Site-specific integration of mycobacteriophage L5: integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette-GuérinQ37477073
Gene targeting in yeast is initiated by two independent strand invasions.Q37593098
Mycobacteriophages: genes and genomesQ37763219
DNA strand invasion promoted by Escherichia coli RecT proteinQ38336429
Mycobacteriophages BPs, Angel and Halo: comparative genomics reveals a novel class of ultra-small mobile genetic elementsQ39440729
Rapid modification of bacterial artificial chromosomes by ET-recombination.Q39727582
In vivo studies on the interaction of RecBCD enzyme and lambda Gam proteinQ39929652
Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteriaQ41036842
Developing live Shigella vaccines using lambda Red recombineeringQ41452880
Detection of novel recombinases in bacteriophage genomes unveils Rad52, Rad51 and Gp2.5 remote homologs.Q42060342
A peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cellsQ42958231
Modifying bacteriophage lambda with recombineeringQ43978857
Rapid identification and susceptibility testing of Mycobacterium tuberculosis from MGIT cultures with luciferase reporter mycobacteriophagesQ44478931
Assembling new Escherichia coli strains by transduction using phage P1.Q44877243
E. coli genome manipulation by P1 transductionQ46760894
Efficient point mutagenesis in mycobacteria using single-stranded DNA recombineering: characterization of antimycobacterial drug targetsQ46790528
Mycobacterial recombineeringQ47814886
Regulation of the inducible acetamidase gene of Mycobacterium smegmatisQ48047785
A set of recombineering plasmids for gram-negative bacteriaQ50080127
The lambda Gam protein inhibits RecBCD binding to dsDNA ends.Q50690671
A recombineering pipeline for functional genomics applied to Caenorhabditis elegans.Q50714542
Escherichia coli detection by GFP-labeled lysozyme-inactivated T4 bacteriophage.Q50790673
In vivo recombineering of bacteriophage lambda by PCR fragments and single-strand oligonucleotides.Q50803970
L5 luciferase reporter mycobacteriophages: a sensitive tool for the detection and assay of live mycobacteria.Q52537517
Recombineering in Mycobacterium tuberculosis.Q54449978
Mismatch amplification mutation assay (MAMA): application to the c-H-ras geneQ67997592
Characterization of bacteriophage λ reverse as an Escherichia coli phage carrying a unique set of host-derived recombination functionsQ69365831
Gene 67, a new, essential bacteriophage T4 head gene codes for a prehead core component, PIP. II. The construction in vitro of unconditionally lethal mutants and their maintenanceQ70545855
Rapid assessment of drug susceptibilities of Mycobacterium tuberculosis by means of luciferase reporter phagesQ70685512
Identifying Determinants of Recombination Specificity: Construction and Characterization of Chimeric Bacteriophage IntegrasesQ72057522
Length determination in bacteriophage lambda tailsQ72405349
Rapid engineering of bacterial artificial chromosomes using oligonucleotidesQ73339514
P433issue1
P921main subjectbacteriophageQ165028
P304page(s)5-14
P577publication date2012-01-01
P1433published inBacteriophageQ26842056
P1476titleRecombineering: A powerful tool for modification of bacteriophage genomes
P478volume2

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Q47366846Synthetic Biology to Engineer Bacteriophage Genomes
Q94479680Weirdo19ES is a novel singleton mycobacteriophage that selects for glycolipid deficient phage-resistant M. smegmatis mutants

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