review article | Q7318358 |
scholarly article | Q13442814 |
P356 | DOI | 10.1146/ANNUREV.BIOCHEM.71.110601.135349 |
P698 | PubMed publication ID | 12045114 |
P2093 | author name string | Michael D Been | |
I-hung Shih | |||
P921 | main subject | hepatitis delta virus | Q1607636 |
ribozyme | Q205858 | ||
P1104 | number of pages | 31 | |
P304 | page(s) | 887-917 | |
P577 | publication date | 2001-11-09 | |
P1433 | published in | Annual Review of Biochemistry | Q567356 |
P1476 | title | Catalytic strategies of the hepatitis delta virus ribozymes | |
P478 | volume | 71 |
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Q28821468 | A Two-Metal-Ion-Mediated Conformational Switching Pathway for HDV Ribozyme Activation |
Q44894635 | A conformational switch controls hepatitis delta virus ribozyme catalysis |
Q41847996 | A novel structural rearrangement of hepatitis delta virus antigenomic ribozyme |
Q41924440 | Analyses of a whole-genome inter-clade recombination map of hepatitis delta virus suggest a host polymerase-driven and viral RNA structure-promoted template-switching mechanism for viral RNA recombination |
Q25255631 | Antigenomic delta ribozyme variants with mutations in the catalytic core obtained by the in vitro selection method. |
Q33848442 | CHARMM force field parameters for simulation of reactive intermediates in native and thio-substituted ribozymes |
Q34698713 | Cations and hydration in catalytic RNA: molecular dynamics of the hepatitis delta virus ribozyme |
Q35628399 | Characterization of the Structure and Dynamics of the HDV Ribozyme at Different Stages Along the Reaction Path |
Q34702891 | Chemical rescue, multiple ionizable groups, and general acid-base catalysis in the HDV genomic ribozyme |
Q54628496 | Click chemistry for rapid labeling and ligation of RNA. |
Q42078666 | Competition between Co(NH(3)(6)3+ and inner sphere Mg2+ ions in the HDV ribozyme |
Q42249936 | Cross-linking experiments reveal the presence of novel structural features between a hepatitis delta virus ribozyme and its substrate |
Q31116966 | Development and comparison of procedures for the selection of delta ribozyme cleavage sites within the hepatitis B virus |
Q33967967 | Disparate HDV ribozyme crystal structures represent intermediates on a rugged free-energy landscape |
Q88589513 | Evidence That Nucleophile Deprotonation Exceeds Bond Formation in the HDV Ribozyme Transition State |
Q35749522 | Evidence for proton transfer in the rate-limiting step of a fast-cleaving Varkud satellite ribozyme |
Q33933216 | Evidence that the polymerase of respiratory syncytial virus initiates RNA replication in a nontemplated fashion. |
Q41500431 | Examination of the folding pathway of the antigenomic hepatitis delta virus ribozyme reveals key interactions of the L3 loop |
Q36604456 | Force Field for Mg(2+), Mn(2+), Zn(2+), and Cd(2+) Ions That Have Balanced Interactions with Nucleic Acids |
Q39747812 | Formation of the P1.1 pseudoknot is critical for both the cleavage activity and substrate specificity of an antigenomic trans-acting hepatitis delta ribozyme |
Q43207477 | Functional characterization of the SOFA delta ribozyme |
Q41827296 | Gene targeting in the Gram-Positive bacterium Lactococcus lactis, using various delta ribozymes |
Q44467023 | General acid catalysis by the hepatitis delta virus ribozyme |
Q59806899 | Generation of 2',3'-Cyclic Phosphate-Containing RNAs as a Hidden Layer of the Transcriptome |
Q45402932 | Long-range impact of peripheral joining elements on structure and function of the hepatitis delta virus ribozyme |
Q37589504 | Modulating RNA structure and catalysis: lessons from small cleaving ribozymes |
Q36058510 | Molecular dynamics simulations of RNA: an in silico single molecule approach. |
Q42283837 | Monitoring of an RNA multistep folding pathway by isothermal titration calorimetry |
Q36650967 | Natural course and treatment of hepatitis D virus infection. |
Q90029453 | Novel ribozymes: discovery, catalytic mechanisms, and the quest to understand biological function |
Q37371202 | Nucleic acid binding properties of the nucleic acid chaperone domain of hepatitis delta antigen |
Q38569267 | Potassium ions modulate a G-quadruplex-ribozyme's activity |
Q37127249 | Quantum mechanical/molecular mechanical simulation study of the mechanism of hairpin ribozyme catalysis |
Q36734198 | RNA recombination in hepatitis delta virus: implications regarding the abilities of mammalian RNA polymerases |
Q35111612 | Replication of human hepatitis delta virus: recent developments |
Q57077874 | Reverse Genetics of Rhabdoviruses |
Q82241688 | Ribonucleic general acid |
Q35552101 | Ribozyme-based gene-inactivation systems require a fine comprehension of their substrate specificities; the case of delta ribozyme |
Q33986945 | Silencing of SPC2 expression using an engineered delta ribozyme in the mouse betaTC-3 endocrine cell line |
Q41841425 | Silencing of amyloid precursor protein expression using a new engineered delta ribozyme |
Q37372096 | Single-molecule fluorescence methods for the analysis of RNA folding and ribonucleoprotein assembly |
Q27644035 | Structural roles of monovalent cations in the HDV ribozyme |
Q35269518 | Structure-function analysis from the outside in: long-range tertiary contacts in RNA exhibit distinct catalytic roles |
Q24793993 | Target-dependent on/off switch increases ribozyme fidelity |
Q34426633 | The catalytic diversity of RNAs |
Q35804539 | The genomic HDV ribozyme utilizes a previously unnoticed U-turn motif to accomplish fast site-specific catalysis |
Q53452081 | The mechanism of acidic hydrolysis of esters explains the HDV ribozyme activity. |
Q34978942 | The pH dependence of hairpin ribozyme catalysis reflects ionization of an active site adenine |
Q43214653 | The use of simple model systems to study spliceosomal catalysis |
Q26795919 | Therapeutic Strategies and New Intervention Points in Chronic Hepatitis Delta Virus Infection |
Q36592176 | Transition State Features in the Hepatitis Delta Virus Ribozyme Reaction Revealed by Atomic Perturbations. |
Q25257390 | Unbiased in vitro selection reveals the unique character of the self-cleaving antigenomic HDV RNA sequence |