Studies of biomolecular conformations and conformational dynamics by mass spectrometry

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Studies of biomolecular conformations and conformational dynamics by mass spectrometry is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

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P356DOI10.1002/MAS.10017
P698PubMed publication ID12210613
P5875ResearchGate publication ID11177698

P2093author name stringIgor A Kaltashov
Stephen J Eyles
P2860cites workSite-specific amide hydrogen/deuterium exchange in E. coli thioredoxins measured by electrospray ionization mass spectrometry.Q43754419
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Effects of pH on the kinetic reaction mechanism of myoglobin unfolding studied by time-resolved electrospray ionization mass spectrometry.Q52080107
Electrospray ionization mass spectrometry and hydrogen/deuterium exchange for probing the interaction of calmodulin with calcium.Q52207509
Modeling deuterium exchange behavior of ERK2 using pepsin mapping to probe secondary structure.Q52207512
Reconstitution of acid-denatured holomyoglobin studied by time-resolved electrospray ionization mass spectrometry.Q52536616
Ultraviolet resonance Raman examination of horse apomyoglobin acid unfolding intermediates.Q54071320
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Conformation of GroEL-bound alpha-lactalbumin probed by mass spectrometry.Q54622296
Is Apomyoglobin a Molten Globule? Structural Characterization by NMRQ57078261
Examining the conformational dynamics of macromolecules with time-resolved synchrotron X-ray ‘footprinting’Q57260349
Two conformational states of β-lactamase bound to GroEL: a biophysical characterization 1 1Edited by A. R. FershtQ57840084
Cavity formation before stable hydrogen bonding in the folding of a β-clam proteinQ57854202
Advantages of External Accumulation for Electron Capture Dissociation in Fourier Transform Mass SpectrometryQ57979713
Origin of the Absorption Band at 1,550 cm.−1 in ProteinsQ59090078
In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assemblyQ21045405
Significant hydrogen exchange protection in GroEL-bound DHFR is maintained during iterative rounds of substrate cyclingQ24674537
Determination of amide hydrogen exchange by mass spectrometry: a new tool for protein structure elucidationQ24675910
Understanding protein folding via free-energy surfaces from theory and experimentQ28139374
Conformational changes in proteins probed by hydrogen-exchange electrospray-ionization mass spectrometryQ28237848
Conformational diseaseQ28244193
From Levinthal to pathways to funnelsQ28300934
Detecting structural changes in viral capsids by hydrogen exchange and mass spectrometryQ28754665
Electron Capture Dissociation of Multiply Charged Protein Cations. A Nonergodic ProcessQ29036858
Electron capture dissociation of gaseous multiply charged ions by Fourier-transform ion cyclotron resonanceQ29397023
Primary structure effects on peptide group hydrogen exchangeQ29614750
Electrospray-assisted modification of proteins: a radical probe of protein structure.Q30323310
Determination of macromolecular folding and structure by synchrotron x-ray radiolysis techniques.Q30327766
Protein folding kinetics by combined use of rapid mixing techniques and NMR observation of individual amide protonsQ30400486
Protein hydrogen exchange studied by the fragment separation method.Q30403346
On the use of chemically derived distance constraints in the prediction of protein structure with myoglobin as an exampleQ30416209
An evaluation of the use of hydrogen exchange at equilibrium to probe intermediates on the protein folding pathwayQ30426755
Probing the non-covalent structure of proteins by amide hydrogen exchange and mass spectrometryQ30426931
Hydrogen exchange: the modern legacy of Linderstrøm-LangQ30427220
Theory of protein folding: the energy landscape perspectiveQ30428743
Selective bridging of bis-cysteinyl residues by arsonous acid derivatives as an approach to the characterization of protein tertiary structures and folding pathways by mass spectrometryQ30432319
Solvent accessibility of the thrombin-thrombomodulin interfaceQ30652742
beta -Helical polymers from isocyanopeptidesQ30657350
Hydrogen-deuterium exchange as a probe of folding and assembly in viral capsidsQ30658814
Detection of transient protein folding populations by mass spectrometryQ34344353
Equilibrium unfolding of proteins monitored by electrospray ionization mass spectrometry: distinguishing two-state from multi-state transitionsQ34468020
Changes in protein conformational mobility upon activation of extracellular regulated protein kinase-2 as detected by hydrogen exchangeQ34634651
Electrospray ionization mass spectrometry as a tool to analyze hydrogen/deuterium exchange kinetics of transmembrane peptides in lipid bilayers.Q35107673
Observation of the noncovalent assembly and disassembly pathways of the chaperone complex MtGimC by mass spectrometryQ35836947
A novel methodology for assignment of disulfide bond pairings in proteinsQ36280302
Quench-flow experiments combined with mass spectrometry show apomyoglobin folds through and obligatory intermediateQ36281197
Antiviral agent blocks breathing of the common cold virus.Q36489398
Local breathing and global unfolding in hydrogen exchange of barnase and its relationship to protein folding pathwaysQ36616512
Deuterium exchange of alpha-helices and beta-sheets as monitored by electrospray ionization mass spectrometryQ36729564
Detection and selective dissociation of intact ribosomes in a mass spectrometerQ36966659
Protein surface topology-probing by selective chemical modification and mass spectrometric peptide mapping.Q37069502
Absence of stable intermediates on the folding pathway of barnaseQ37260926
How common is the funnel-like energy landscape in protein-protein interactions?Q38272420
An experimental procedure for increasing the structural resolution of chemical hydrogen-exchange measurements on proteins: Application to ribonuclease S peptideQ39300590
Solvent effects on the conformation of the transmembrane peptide gramicidin A: insights from electrospray ionization mass spectrometryQ40158841
Structure and energy change in hemoglobin by hydrogen exchange labelingQ40687268
Kinetic and equilibrium intermediates in protein foldingQ40695742
Functional polymers and dendrimers: reactivity, molecular architecture, and interfacial energyQ40728495
The concept of a random coil. Residual structure in peptides and denatured proteinsQ41394913
Evidence for identity between the equilibrium unfolding intermediate and a transient folding intermediate: a comparative study of the folding reactions of alpha-lactalbumin and lysozymeQ41478567
Touring the landscapes: partially folded proteins examined by hydrogen exchangeQ41566813
Hydrogen exchange at equilibrium: a short cut for analysing protein-folding pathways?Q41576466
Studying noncovalent protein complexes by electrospray ionization mass spectrometryQ41671168
The energetics of T4 lysozyme reveal a hierarchy of conformationsQ41699430
Molecular structures from low angle X-ray and neutron scattering studiesQ41726269
Dynamics of cellular retinoic acid binding protein I on multiple time scales with implications for ligand bindingQ41752247
Solvent-induced conformational changes of polypeptides probed by electrospray-ionization mass spectrometryQ41992607
Protein folding intermediates: native-state hydrogen exchangeQ42322493
Dynamics of iron release from transferrin N-lobe studied by electrospray ionization mass spectrometryQ42651958
Intrinsic tryptophans of CRABPI as probes of structure and foldingQ42845349
Characterization of the interface structure of enzyme-inhibitor complex by using hydrogen-deuterium exchange and electrospray ionization Fourier transform ion cyclotron resonance mass spectrometryQ42847423
Direct evidence by H/D exchange and ESI-MS for transient unproductive domain interaction in the refolding of an antibody scFv fragmentQ42847484
Structures of apomyoglobin's various acid-destabilized formsQ43585916
Isotope-tagged cross-linking reagents. A new tool in mass spectrometric protein interaction analysisQ43608832
A transition-state analogue reduces protein dynamics in hypoxanthine-guanine phosphoribosyltransferaseQ43659809
Interfacial positioning and stability of transmembrane peptides in lipid bilayers studied by combining hydrogen/deuterium exchange and mass spectrometryQ43660537
Folding of malate dehydrogenase inside the GroEL-GroES cavityQ43688024
Phosphorylation causes subtle changes in solvent accessibility at the interdomain interface of methylesterase CheB.Q30662656
The palmitoyl groups of lung surfactant protein C reduce unfolding into a fibrillogenic intermediateQ30663543
Measurements of protein stability by H/D exchange and matrix-assisted laser desorption/ionization mass spectrometry using picomoles of materialQ30694334
Pulsed-alkylation mass spectrometry for the study of protein folding and dynamics: development and application to the study of a folding/unfolding intermediate of bacterial luciferaseQ30773775
Solution structure and dynamics of biomolecules from Raman optical activity.Q30863124
High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.Q30870717
Characterization of intermolecular beta-sheet peptides by mass spectrometry and hydrogen isotope exchangeQ30882523
Chemical cross-linking with thiol-cleavable reagents combined with differential mass spectrometric peptide mapping--a novel approach to assess intermolecular protein contactsQ30919410
Kinetic intermediates in the folding of gaseous protein ions characterized by electron capture dissociation mass spectrometryQ31013568
Thermodynamic stability measurements on multimeric proteins using a new H/D exchange- and matrix-assisted laser desorption/ionization (MALDI) mass spectrometry-based methodQ31044556
A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.Q31485560
A kinetic folding intermediate probed by native state hydrogen exchangeQ31816300
Measurement of amide hydrogen exchange by MALDI-TOF mass spectrometryQ31994521
Identification of the binding surface on beta-lactamase for GroEL by limited proteolysis and MALDI-mass spectrometryQ32037383
A new crosslinker for mass spectrometric analysis of the quaternary structure of protein complexesQ32043734
Optimization of the cleavage reaction for cyanylated cysteinyl proteins for efficient and simplified mass mappingQ32065358
Trapping of intermediates during the refolding of recombinant human epidermal growth factor (hEGF) by cyanylation, and subsequent structural elucidation by mass spectrometryQ32065532
Evidence of viral capsid dynamics using limited proteolysis and mass spectrometryQ32155131
Spectroscopic methods for analysis of protein secondary structureQ33179428
Disassembly of intact multiprotein complexes in the gas phaseQ33536627
From computer simulations to human disease: emerging themes in protein foldingQ33630957
Folding funnels, binding funnels, and protein functionQ33674287
Conformational issues in the characterization of proteinsQ33834951
Millisecond radiolytic modification of peptides by synchrotron X-rays identified by mass spectrometryQ33875323
Some tenets pertaining to electrospray ionization mass spectrometryQ33996868
Protein folding intermediates and pathways studied by hydrogen exchangeQ34001354
The renaissance of fluorescence resonance energy transferQ34019505
Mass spectrometry and proteomicsQ34046331
Protein complexes and analysis of their assembly by mass spectrometryQ34066555
Perspectives for mass spectrometry and functional proteomicsQ34165160
Characterization of the oligomeric states of insulin in self-assembly and amyloid fibril formation by mass spectrometryQ34173720
Different subdomains are most protected from hydrogen exchange in the molten globule and native states of human alpha-lactalbuminQ34288348
Infrared multiphoton dissociation of large multiply charged ions for biomolecule sequencingQ34292844
Understanding how proteins fold: the lysozyme story so far.Q34338183
P4510describes a project that usesmass spectrometryQ180809
P433issue1
P921main subjectmass spectrometryQ180809
P304page(s)37-71
P577publication date2002-01-01
P1433published inMass Spectrometry ReviewsQ682690
P1476titleStudies of biomolecular conformations and conformational dynamics by mass spectrometry
P478volume21

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