Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin

scientific article

Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1042199158
P356DOI10.1186/S12870-014-0370-8
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/s12870-014-0370-8
P932PMC publication ID4312598
P698PubMed publication ID25524329
P5875ResearchGate publication ID269768477

P50authorGrant CramerQ56795597
Karen A. SchlauchQ56872886
Richard L. TillettQ57664917
P2093author name stringMario Pezzotti
Massimo Delledonne
Alberto Ferrarini
Sara Zenoni
Ryan Ghan
Marianna Fasoli
Hildegarde Heymann
P2860cites workWhich impact for beta-damascenone on red wines aroma?Q50698016
Non-climacteric fruit ripening in pepper: increased transcription of EIL-like genes normally regulated by ethylene.Q51926212
Targets of the WRKY53 transcription factor and its role during leaf senescence in Arabidopsis.Q52062295
Phosphorylation of an ERF transcription factor by Arabidopsis MPK3/MPK6 regulates plant defense gene induction and fungal resistance.Q54442054
Associations between the Sensory Attributes and Volatile Composition of Cabernet Sauvignon Wines and the Volatile Composition of the Grapes Used for Their ProductionQ58067140
Quantitative metabolic profiling of grape, apple and raspberry volatile compounds (VOCs) using a GC/MS/MS methodQ63443984
Comparison of isolation methods for the determination of important aroma compounds in black currant (Ribes nigrum L.) juice, using nasal impact frequency profilingQ79796899
Stimulation of the grape berry expansion by ethylene and effects on related gene transcripts, over the ripening phaseQ81954297
The chimeric repressor version of an Ethylene Response Factor (ERF) family member, Sl-ERF.B3, shows contrasting effects on tomato fruit ripeningQ87472260
MUSCLE: a multiple sequence alignment method with reduced time and space complexityQ21284290
Cytoscape: a software environment for integrated models of biomolecular interaction networksQ24515682
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
Basic local alignment search toolQ25938991
Berry ripening: recently heard through the grapevineQ26830658
Exploration, normalization, and summaries of high density oligonucleotide array probe level dataQ27861098
The thermodynamics of DNA structural motifsQ28261376
affy--analysis of Affymetrix GeneChip data at the probe levelQ29547353
BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networksQ29547427
TM4 microarray software suiteQ29618829
Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and ChardonnayQ30488442
OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approachQ30727963
A sugar-inducible protein kinase, VvSK1, regulates hexose transport and sugar accumulation in grapevine cellsQ30893271
Tissue-specific mRNA expression profiling in grape berry tissuesQ33288492
Functional genomics of mountain pine beetle (Dendroctonus ponderosae) midguts and fat bodiesQ33547712
Functional annotation, genome organization and phylogeny of the grapevine (Vitis vinifera) terpene synthase gene family based on genome assembly, FLcDNA cloning, and enzyme assaysQ33724802
Transcriptional analysis of late ripening stages of grapevine berry.Q34078590
Increasing the source/sink ratio in Vitis vinifera (cv Sangiovese) induces extensive transcriptome reprogramming and modifies berry ripeningQ34109181
2-Methoxy-3-isobutylpyrazine in grape berries and its dependence on genotypeQ34144991
Comparative analysis of grapevine whole-genome gene predictions, functional annotation, categorization and integration of the predicted gene sequencesQ34255003
The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L.Q34306132
Berry flesh and skin ripening features in Vitis vinifera as assessed by transcriptional profiling.Q34328172
Transcriptome analysis at four developmental stages of grape berry (Vitis vinifera cv. Shiraz) provides insights into regulated and coordinated gene expressionQ34507496
Genome-wide analysis of the expansin gene superfamily reveals grapevine-specific structural and functional characteristicsQ34685712
Ethylene response factor 6 is a regulator of reactive oxygen species signaling in ArabidopsisQ34934891
The grapevine gene nomenclature systemQ34986211
Functional characterisation of three members of the Vitis vinifera L. carotenoid cleavage dioxygenase gene familyQ35012433
Dynamics of the chili pepper transcriptome during fruit developmentQ35098835
The complex regulation of WRKY53 during leaf senescence of Arabidopsis thalianaQ37651965
Improving the flavor of fresh fruits: genomics, biochemistry, and biotechnologyQ37747627
Plant volatiles: production, function and pharmacologyQ37889127
Fruit development and ripeningQ38080155
Molecular and genetic regulation of fruit ripeningQ38098953
APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programsQ38134762
Ethylene signaling: simple ligand, complex regulation.Q38135098
The basic leucine zipper transcription factor ABSCISIC ACID RESPONSE ELEMENT-BINDING FACTOR2 is an important transcriptional regulator of abscisic acid-dependent grape berry ripening processes.Q38310902
Transcriptional regulation of anthocyanin biosynthesis in ripening fruits of grapevine under seasonal water deficitQ38934231
Ethylene Response Factor6 acts as a central regulator of leaf growth under water-limiting conditions in ArabidopsisQ38978874
Environmental stress enhances biosynthesis of flavor precursors, S-3-(hexan-1-ol)-glutathione and S-3-(hexan-1-ol)-L-cysteine, in grapevine through glutathione S-transferase activationQ39142477
Relationship between red wine grades and phenolics. 1. Tannin and total phenolics concentrationsQ39820929
Wine chemistry and flavor: looking into the crystal glassQ39950717
Genome-wide analysis of the ERF gene family in Arabidopsis and riceQ40358653
Sugar and abscisic acid signaling orthologs are activated at the onset of ripening in grapeQ40618793
Ethylene is involved in strawberry fruit ripening in an organ-specific mannerQ41785204
Acyl substrate preferences of an IAA-amido synthetase account for variations in grape (Vitis vinifera L.) berry ripening caused by different auxinic compounds indicating the importance of auxin conjugation in plant development.Q41826615
Involvement of ethylene signalling in a non-climacteric fruit: new elements regarding the regulation of ADH expression in grapevineQ42634465
Sensory and physicochemical characterization of juices made with pomegranate and blueberries, blackberries, or raspberriesQ42741185
The grapevine expression atlas reveals a deep transcriptome shift driving the entire plant into a maturation programQ42773393
Two O-methyltransferases involved in the biosynthesis of methoxypyrazines: grape-derived aroma compounds important to wine flavour.Q43010145
Effect of ethylene and 1-MCP treatments on strawberry fruit ripeningQ43114042
Abscisic acid stimulated ripening and gene expression in berry skins of the Cabernet Sauvignon grapeQ43258462
The plant NADPH oxidase RBOHD mediates rapid systemic signaling in response to diverse stimuliQ43289988
A regulatory cascade involving class II ETHYLENE RESPONSE FACTOR transcriptional repressors operates in the progression of leaf senescence.Q43780612
Genetic analysis of the biosynthesis of 2-methoxy-3-isobutylpyrazine, a major grape-derived aroma compound impacting wine qualityQ43856478
Volatile composition in raspberry cultivars grown in the Pacific Northwest determined by stir bar sorptive extraction-gas chromatography-mass spectrometryQ44129606
Yield effects on 2-methoxy-3-isobutylpyrazine concentration in cabernet sauvignon using a solid phase microextraction gas chromatography/mass spectrometry methodQ44316059
A grape ASR protein involved in sugar and abscisic acid signalingQ44571752
Sensitivity Thresholds and Variable Time Scales in Plant Hormone Action.Q46035332
Investigation of volatile compounds in two raspberry cultivars by two headspace techniques: solid-phase microextraction/gas chromatography-mass spectrometry (SPME/GC-MS) and proton-transfer reaction-mass spectrometry (PTR-MS).Q46060216
Evolution of volatile compounds during the development of cabernet sauvignon grapes (Vitis vinifera L.).Q46077385
Activation of MAPK kinase 9 induces ethylene and camalexin biosynthesis and enhances sensitivity to salt stress in ArabidopsisQ46435873
Gene expression analyses in individual grape (Vitis vinifera L.) berries during ripening initiation reveal that pigmentation intensity is a valid indicator of developmental staging within the clusterQ46472530
Different ethylene receptors show an increased expression during the ripening of strawberries: does such an increment imply a role for ethylene in the ripening of these non-climacteric fruits?Q46546673
Volatile monoterpenes in black currant (Ribes nigrum L.) juice: effects of heating and enzymatic treatment by beta-glucosidaseQ46989973
Relationship between red wine grade and phenolics. 2. Tannin composition and sizeQ47369822
Biosynthesis of plant-derived flavor compoundsQ47710826
A dominant repressor version of the tomato Sl-ERF.B3 gene confers ethylene hypersensitivity via feedback regulation of ethylene signaling and response componentsQ47818676
A methyltransferase essential for the methoxypyrazine-derived flavour of wineQ48039636
The antagonist function of Arabidopsis WRKY53 and ESR/ESP in leaf senescence is modulated by the jasmonic and salicylic acid equilibriumQ48080793
Environmental and seasonal influences on red raspberry flavour volatiles and identification of quantitative trait loci (QTL) and candidate genesQ48138587
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesCytoscapeQ3699942
P921main subjectVitis viniferaQ30046
transcriptomeQ252857
P304page(s)370
P577publication date2014-12-19
P1433published inBMC Plant BiologyQ15760766
P1476titleTranscriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin
P478volume14

Reverse relations

cites work (P2860)
Q35965472Abscisic acid transcriptomic signaling varies with grapevine organ
Q49913144Co-expression network analysis and cis-regulatory element enrichment determine putative functions and regulatory mechanisms of grapevine ATL E3 ubiquitin ligases.
Q36035235Combined physiological, transcriptome, and cis-regulatory element analyses indicate that key aspects of ripening, metabolism, and transcriptional program in grapes (Vitis vinifera L.) are differentially modulated accordingly to fruit size
Q38501509Complex Interplay of Hormonal Signals during Grape Berry Ripening.
Q47234957Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine
Q42236809Deciphering the Role of CBF/DREB Transcription Factors and Dehydrins in Maintaining the Quality of Table Grapes cv. Autumn Royal Treated with High CO2 Levels and Stored at 0°C
Q40960286Developmental and Metabolic Plasticity of White-Skinned Grape Berries in Response to Botrytis cinerea during Noble Rot.
Q48334766Disclosing the Molecular Basis of the Postharvest Life of Berry in Different Grapevine Genotypes.
Q31161957Dissecting the Biochemical and Transcriptomic Effects of a Locally Applied Heat Treatment on Developing Cabernet Sauvignon Grape Berries
Q47139047Dissecting the Variations of Ripening Progression and Flavonoid Metabolism in Grape Berries Grown under Double Cropping System
Q92189026Distinct Metabolic Signals Underlie Clone by Environment Interplay in "Nebbiolo" Grapes Over Ripening
Q38755325Drawing Links from Transcriptome to Metabolites: The Evolution of Aroma in the Ripening Berry of Moscato Bianco (Vitis vinifera L.).
Q41869429Expression Profiles and DNA-Binding Affinity of Five ERF Genes in Bunches of Vitis vinifera cv. Cardinal Treated with High Levels of CO2 at Low Temperature.
Q35842896Five omic technologies are concordant in differentiating the biochemical characteristics of the berries of five grapevine (Vitis vinifera L.) cultivars
Q38766263Genome-wide analysis of cis-regulatory element structure and discovery of motif-driven gene co-expression networks in grapevine.
Q57799792Genome-wide identification of AP2/ERF superfamily genes and their expression during fruit ripening of Chinese jujube
Q41312013Omics Approaches for Understanding Grapevine Berry Development: Regulatory Networks Associated with Endogenous Processes and Environmental Responses
Q26749136Omics studies of citrus, grape and rosaceae fruit trees
Q89771397Phytohormone profiles are strongly altered during induction and symptom development of the physiological ripening disorder berry shrivel in grapevine
Q58805459Reducing sampling bias in molecular studies of grapevine fruit ripening: transcriptomic assessment of the density sorting method
Q38708090Ripening Transcriptomic Program in Red and White Grapevine Varieties Correlates with Berry Skin Anthocyanin Accumulation
Q90726889Selection of candidate genes controlling veraison time in grapevine through integration of meta-QTL and transcriptomic data
Q55258302Structure and transcriptional regulation of the major intrinsic protein gene family in grapevine.
Q39262641The Terroir Concept Interpreted through Grape Berry Metabolomics and Transcriptomics.
Q33742645The common transcriptional subnetworks of the grape berry skin in the late stages of ripening
Q59126893Timing and Order of the Molecular Events Marking the Onset of Berry Ripening in Grapevine
Q41917768Transcriptional Responses to Pre-flowering Leaf Defoliation in Grapevine Berry from Different Growing Sites, Years, and Genotypes
Q36000439Transcriptome profiling of grapevine seedless segregants during berry development reveals candidate genes associated with berry weight
Q36161710Transcriptomic comparison between two Vitis vinifera L. varieties (Trincadeira and Touriga Nacional) in abiotic stress conditions
Q31100144Transcriptomic network analyses of leaf dehydration responses identify highly connected ABA and ethylene signaling hubs in three grapevine species differing in drought tolerance
Q64992531Transcriptomics of the grape berry shrivel ripening disorder.
Q62666647Unravelling wine volatile evolution during Shiraz grape ripening by untargeted HS-SPME-GC × GC-TOFMS
Q97529655VviERF6Ls: an expanded clade in Vitis responds transcriptionally to abiotic and biotic stresses and berry development

Search more.