| scholarly article | Q13442814 |
| P8978 | DBLP publication ID | journals/bioinformatics/MaereHK05 |
| P356 | DOI | 10.1093/BIOINFORMATICS/BTI551 |
| P8608 | Fatcat ID | release_nkmpgwjro5dbjcsvxu5a6p6iz4 |
| P3181 | OpenCitations bibliographic resource ID | 316618 |
| P698 | PubMed publication ID | 15972284 |
| P5875 | ResearchGate publication ID | 7771778 |
| P50 | author | Martin Kuiper | Q37379795 |
| Steven Maere | Q40464536 | ||
| P2093 | author name string | Karel Heymans | |
| P2860 | cites work | Cytoscape: a software environment for integrated models of biomolecular interaction networks | Q24515682 |
| The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli | Q24599491 | ||
| GoMiner: a resource for biological interpretation of genomic and proteomic data | Q24796534 | ||
| GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes | Q29616254 | ||
| P4510 | describes a project that uses | Cytoscape | Q3699942 |
| P433 | issue | 16 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Gene Ontology | Q135085 |
| ontology | Q324254 | ||
| Cytoscape | Q3699942 | ||
| P304 | page(s) | 3448-3449 | |
| P577 | publication date | 2005-06-21 | |
| P1433 | published in | Bioinformatics | Q4914910 |
| P1476 | title | BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks | |
| P478 | volume | 21 |
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| Q33691435 | Characterization of genetic aberrations in a single case of metastatic thymic adenocarcinoma |
| Q61445631 | Characterization of heterogeneous redox responses in hepatocellular carcinoma patients using network analysis. |
| Q38787638 | Characterization of inflammatory markers and transcriptome profiles of differentially activated embryonic stem cell-derived microglia. |
| Q38477379 | Characterization of the canine urinary proteome |
| Q58049969 | Characterization of the cork formation and production transcriptome in × hybrids |
| Q37609215 | Characterization of the membrane proteome and N-glycoproteome in BV-2 mouse microglia by liquid chromatography-tandem mass spectrometry |
| Q33931010 | Characterization the regulation of herpesvirus miRNAs from the view of human protein interaction network |
| Q56604008 | Chemical Ontologies for Standardization, Knowledge Discovery, and Data Mining |
| Q28833667 | Chemical inhibition of a subset of Arabidopsis thaliana GSK3-like kinases activates brassinosteroid signaling |
| Q92024370 | Chemical-genetic profiling reveals limited cross-resistance between antimicrobial peptides with different modes of action |
| Q51702513 | Chemokine (C-C motif) receptor 2-positive monocytes aggravate the early phase of acetaminophen-induced acute liver injury. |
| Q38823705 | Chemotherapy-induced antitumor immunity requires formyl peptide receptor 1. |
| Q35682612 | Chromosomal copy number variation reveals differential levels of genomic plasticity in distinct Trypanosoma cruzi strains |
| Q99710859 | Cilia interactome with predicted protein-protein interactions reveals connections to Alzheimer's disease, aging and other neuropsychiatric processes |
| Q37127625 | Circadian Oscillation of the Lettuce Transcriptome under Constant Light and Light-Dark Conditions |
| Q27323295 | Circadian clock genes Per1 and Per2 regulate the response of metabolism-associated transcripts to sleep disruption |
| Q96304700 | Clinical Proteomics Profiling for Biomarker Identification Among Patients Suffering With Indian Post Kala Azar Dermal Leishmaniasis |
| Q37714579 | Clinical proteomic biomarkers: relevant issues on study design & technical considerations in biomarker development |
| Q99405274 | Clinical significance of long non-coding RNA DUXAP8 and its protein coding genes in hepatocellular carcinoma |
| Q91785283 | Clinical significance of miRNA‑1 and its potential target gene network in lung squamous cell carcinoma |
| Q24570122 | ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks |
| Q28686900 | Cluster and propensity based approximation of a network |
| Q33436751 | Clustering of gene expression data based on shape similarity |
| Q27936220 | Cmr1/WDR76 defines a nuclear genotoxic stress body linking genome integrity and protein quality control |
| Q35701895 | Co-existence of intact stemness and priming of neural differentiation programs in mES cells lacking Trim71. |
| Q90078931 | Co-expression network analysis identified hub genes critical to triglyceride and free fatty acid metabolism as key regulators of age-related vascular dysfunction in mice |
| Q35004870 | CoCiter: an efficient tool to infer gene function by assessing the significance of literature co-citation |
| Q35896689 | CoExpNetViz: Comparative Co-Expression Networks Construction and Visualization Tool |
| Q33830070 | Codon usage variability determines the correlation between proteome and transcriptome fold changes |
| Q37417304 | Coexpression network based on natural variation in human gene expression reveals gene interactions and functions |
| Q38487643 | Coexpression patterns indicate that GPI-anchored non-specific lipid transfer proteins are involved in accumulation of cuticular wax, suberin and sporopollenin. |
| Q64387761 | Cognition-Enhancing Vagus Nerve Stimulation Alters the Epigenetic Landscape |
| Q36284528 | Coiled-coil networking shapes cell molecular machinery |
| Q35659297 | Cold and heat pattern of rheumatoid arthritis in traditional Chinese medicine: distinct molecular signatures indentified by microarray expression profiles in CD4-positive T cell |
| Q51043962 | Colitis-accelerated colorectal cancer and metabolic dysregulation in a mouse model. |
| Q30908848 | Colorectal cancer cell-derived microvesicles are enriched in cell cycle-related mRNAs that promote proliferation of endothelial cells |
| Q28391219 | Colorectal cancer derived organotypic spheroids maintain essential tissue characteristics but adapt their metabolism in culture |
| Q42124490 | ComPPI: a cellular compartment-specific database for protein-protein interaction network analysis. |
| Q37314201 | Combination of transcriptomic and proteomic approaches helps to unravel the protein composition of Chelidonium majus L. milky sap. |
| Q38484704 | Combining animal personalities with transcriptomics resolves individual variation within a wild-type zebrafish population and identifies underpinning molecular differences in brain function |
| Q58763470 | Combining discovery and targeted proteomics reveals a prognostic signature in oral cancer |
| Q34993880 | Combining small molecules for cell reprogramming through an interatomic analysis. |
| Q36710084 | Combining systems pharmacology, transcriptomics, proteomics, and metabolomics to dissect the therapeutic mechanism of Chinese herbal Bufei Jianpi formula for application to COPD. |
| Q33893289 | Common and unique elements of the ABA-regulated transcriptome of Arabidopsis guard cells |
| Q36097815 | Common protein sequence signatures associate with Sclerotinia borealis lifestyle and secretion in fungal pathogens of the Sclerotiniaceae |
| Q57788700 | Comparative De Novo transcriptome analysis of the Australian black-lip and Sydney rock oysters reveals expansion of repetitive elements in Saccostrea genomes |
| Q92537854 | Comparative Genomics Analysis of Ciliates Provides Insights on the Evolutionary History Within "Nassophorea-Synhymenia-Phyllopharyngea" Assemblage |
| Q38385358 | Comparative Ploidy Proteomics of Candida albicans Biofilms Unraveled the Role of the AHP1 Gene in the Biofilm Persistence Against Amphotericin B. |
| Q36160699 | Comparative RNA-Seq profiling of berry development between table grape 'Kyoho' and its early-ripening mutant 'Fengzao'. |
| Q37293203 | Comparative Transcriptomic Analysis of Two Brassica napus Near-Isogenic Lines Reveals a Network of Genes That Influences Seed Oil Accumulation |
| Q59808628 | Comparative Transcriptomics of Rat and Axolotl After Spinal Cord Injury Dissects Differences and Similarities in Inflammatory and Matrix Remodeling Gene Expression Patterns |
| Q37271949 | Comparative analysis of Cucurbita pepo metabolism throughout fruit development in acorn squash and oilseed pumpkin |
| Q35085445 | Comparative analysis of RNAi screening technologies at genome-scale reveals an inherent processing inefficiency of the plasmid-based shRNA hairpin |
| Q31011460 | Comparative analysis of molecular mechanism of spinal cord injury with time based on bioinformatics data |
| Q89713399 | Comparative analysis of the P-type ATPase gene family in seven Rosaceae species and an expression analysis in pear (Pyrus bretschneideri Rehd.). |
| Q35780780 | Comparative genomic analysis of Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis. |
| Q90671793 | Comparative genomic investigation of high-elevation adaptation in ectothermic snakes |
| Q30365464 | Comparative genomics of canine-isolated Leishmania (Leishmania) amazonensis from an endemic focus of visceral leishmaniasis in Governador Valadares, southeastern Brazil. |
| Q55136396 | Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum. |
| Q39015802 | Comparative interactomics for virus-human protein-protein interactions: DNA viruses versus RNA viruses |
| Q35218278 | Comparative metabolic and transcriptional analysis of a doubled diploid and its diploid citrus rootstock (C. junos cv. Ziyang xiangcheng) suggests its potential value for stress resistance improvement |
| Q33869206 | Comparative muscle transcriptome associated with carcass traits of Nellore cattle. |
| Q36131119 | Comparative proteome analysis of human epithelial ovarian cancer. |
| Q35996397 | Comparative proteomic analysis of a membrane-enriched fraction from flag leaves reveals responses to chemical hybridization agent SQ-1 in wheat |
| Q58787933 | Comparative proteomics of two Mycoplasma hyopneumoniae strains and Mycoplasma flocculare identified potential porcine enzootic pneumonia determinants |
| Q28109503 | Comparative sequence analyses of genome and transcriptome reveal novel transcripts and variants in the Asian elephant Elephas maximus |
| Q35681372 | Comparative studies of mitochondrial proteomics reveal an intimate protein network of male sterility in wheat (Triticum aestivum L.). |
| Q35596377 | Comparative study of the protein profiles of Sunki mandarin and Rangpur lime plants in response to water deficit |
| Q33825741 | Comparative tissue transcriptomics reveal prompt inter-organ communication in response to local bacterial kidney infection |
| Q52592165 | Comparative transcriptome analysis in Arabidopsis ein2/ore3 and ahk3/ore12 mutants during dark-induced leaf senescence. |
| Q34079894 | Comparative transcriptome analysis of leaves and roots in response to sudden increase in salinity in Brassica napus by RNA-seq |
| Q54937778 | Comparative transcriptome analysis of nonchilled, chilled, and late-pink bud reveals flowering pathway genes involved in chilling-mediated flowering in blueberry. |
| Q93047717 | Comparative transcriptome analysis of rhizome nodes and internodes in Panax. japonicus var. major reveals candidate genes involved in the biosynthesis of triterpenoid saponins |
| Q55385529 | Comparative transcriptome analysis to investigate the potential role of miRNAs in milk protein/fat quality. |
| Q97517285 | Comparative transcriptome and metabolomic profiling reveal the complex mechanisms underlying the developmental dynamics of tobacco leaves |
| Q47416289 | Comparative transcriptome profile of the leaf elongation zone of wild barley (Hordeum spontaneum) eibi1 mutant and its isogenic wild type |
| Q35914682 | Comparative transcriptomics and comprehensive marker resource development in mulberry |
| Q33582269 | Comparative transcriptomics of mountain pine beetle pheromone-biosynthetic tissues and functional analysis of CYP6DE3 |
| Q49831218 | Comparative transcriptomics with self-organizing map reveals cryptic photosynthetic differences between two accessions of North American Lake cress. |
| Q90284158 | Comparison between the Transcriptomes of 'KDML105' Rice and a Salt-Tolerant Chromosome Segment Substitution Line |
| Q34286153 | Comparison of Atlantic salmon individuals with different outcomes of cardiomyopathy syndrome (CMS) |
| Q34918110 | Comparison of tamoxifen and letrozole response in mammary preneoplasia of ER and aromatase overexpressing mice defines an immune-associated gene signature linked to tamoxifen resistance. |
| Q39369490 | Comparison of transcriptional profiles between CD4+ and CD8+ T cells in HIV type 1-infected patients |
| Q36205153 | Comprehensive Gene expression meta-analysis and integrated bioinformatic approaches reveal shared signatures between thrombosis and myeloproliferative disorders |
| Q28550240 | Comprehensive Map of Molecules Implicated in Obesity |
| Q36745098 | Comprehensive Proteomic and Metabolomic Signatures of Nontypeable Haemophilus influenzae-Induced Acute Otitis Media Reveal Bacterial Aerobic Respiration in an Immunosuppressed Environment |
| Q34105132 | Comprehensive analysis of alternative splicing in Digitalis purpurea by strand-specific RNA-Seq |
| Q37353105 | Comprehensive analysis of imprinted genes in maize reveals allelic variation for imprinting and limited conservation with other species |
| Q35853391 | Comprehensive characterization of a time-course transcriptional response induced by autotoxins in Panax ginseng using RNA-Seq |
| Q33987997 | Comprehensive gene expression analysis of human embryonic stem cells during differentiation into neural cells |
| Q92713876 | Comprehensive investigation of p53, p21, nm23, and VEGF expression in hepatitis B virus-related hepatocellular carcinoma overall survival after hepatectomy |
| Q89535886 | Comprehensive molecular insights into the stress response dynamics of rice (Oryza sativa L.) during rice tungro disease by RNA-seq-based comparative whole transcriptome analysis |
| Q39683396 | Comprehensive proteomic analysis of human bile |
| Q28552533 | Computational Identification of Novel Stage-Specific Biomarkers in Colorectal Cancer Progression |
| Q26314384 | Computational characterization of Iron metabolism in the Tsetse disease vector, Glossina morsitans: IRE stem-loops |
| Q34166261 | Computational identification of phospho-tyrosine sub-networks related to acanthocyte generation in neuroacanthocytosis |
| Q36682691 | Computational prediction of cancer-gene function |
| Q37825459 | Computational systems biology of aging |
| Q37466683 | Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis |
| Q28474752 | Connecting mutations of the RNA polymerase II C-terminal domain to complex phenotypic changes using combined gene expression and network analyses |
| Q38133295 | Connecting the dots: applications of network medicine in pharmacology and disease |
| Q35621662 | Consensus comparative analysis of human embryonic stem cell-derived cardiomyocytes |
| Q28743869 | Conservation and canalization of gene expression during angiosperm diversification accompany the origin and evolution of the flower |
| Q38429205 | Conserved Transcription Factors Steer Growth-Related Genomic Programs in Daphnia |
| Q33829795 | Conserved developmental transcriptomes in evolutionarily divergent species. |
| Q57250268 | Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants |
| Q36320724 | Constructing the angiome: a global angiogenesis protein interaction network |
| Q35362026 | Construction and Analysis of the Cell Surface's Protein Network for Human Sperm-Egg Interaction |
| Q36130964 | Construction and validation of a gene co-expression network in grapevine (Vitis vinifera. L.). |
| Q33499079 | Construction of a polycystic ovarian syndrome (PCOS) pathway based on the interactions of PCOS-related proteins retrieved from bibliomic data |
| Q38500289 | Construction of gene regulatory networks using biclustering and Bayesian networks |
| Q34207814 | Construction of large signaling pathways using an adaptive perturbation approach with phosphoproteomic data |
| Q34586288 | Contextualised urinary biomarker analysis facilitates diagnosis of paediatric obstructive sleep apnoea |
| Q52732794 | Contrasting cadmium resistance strategies in two metallicolous populations of Arabidopsis halleri. |
| Q43858723 | Contribution of NAC transcription factors to plant adaptation to land. |
| Q28548555 | Control of Neuronal Network in Caenorhabditis elegans |
| Q28243455 | Convergence of biomarkers, bioinformatics and nanotechnology for individualized cancer treatment |
| Q54983701 | Convergent Pathways in Idiopathic Autism Revealed by Time Course Transcriptomic Analysis of Patient-Derived Neurons. |
| Q47630787 | Coordinated Functional Divergence of Genes after Genome Duplication in Arabidopsis thaliana |
| Q35551381 | Copy number variation in the speciation of pigs: a possible prominent role for olfactory receptors |
| Q38501724 | Correlation between cold and hot pattern in traditional Chinese medicine and gene expression profiles in rheumatoid arthritis |
| Q35631471 | Coupling of Cellular Processes and Their Coordinated Oscillations under Continuous Light in Cyanothece sp. ATCC 51142, a Diazotrophic Unicellular Cyanobacterium |
| Q36579170 | Coupling of Physiological and Proteomic Analysis to Understand the Ethylene- and Chilling-Induced Kiwifruit Ripening Syndrome. |
| Q33566506 | CpG_MI: a novel approach for identifying functional CpG islands in mammalian genomes |
| Q39869811 | Creation of the two isoforms of rodent NKG2D was driven by a B1 retrotransposon insertion. |
| Q41147018 | Cross-species functional genomic analysis identifies resistance genes of the histone deacetylase inhibitor valproic acid |
| Q93111285 | Crosstalk between microRNAs, the putative target genes and the lncRNA network in metabolic diseases |
| Q90271627 | Current paradigms and new perspectives on fetal hypoxia: implications for fetal brain development in late gestation |
| Q36021367 | Cyc17, a meiosis-specific cyclin, is essential for anaphase initiation and chromosome segregation in Tetrahymena thermophila. |
| Q39736048 | Cyclin D1/cyclin-dependent kinase 4 interacts with filamin A and affects the migration and invasion potential of breast cancer cells |
| Q34521175 | Cyclodextrin promotes atherosclerosis regression via macrophage reprogramming |
| Q38429157 | CytoCluster: A Cytoscape Plugin for Cluster Analysis and Visualization of Biological Networks |
| Q89554805 | Cytosolic GLUTAMINE SYNTHETASE 1;1 modulates metabolism and chloroplast development in roots |
| Q24684627 | DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists |
| Q38496554 | DEFOG: discrete enrichment of functionally organized genes |
| Q34896129 | DNA copy number evolution in Drosophila cell lines |
| Q56976067 | DNA damage-induced dynamic changes in abundance and cytosol-nuclear translocation of proteins involved in translational processes, metabolism, and autophagy |
| Q97529344 | DNA demethylases are required for myo-inositol-mediated mutualism between plants and beneficial rhizobacteria |
| Q92015411 | DNA hypermethylation of aurora kinase A in hepatitis C virus‑positive hepatocellular carcinoma |
| Q58052330 | Data Integration: Towards Understanding Biological Complexity |
| Q30983279 | Data for proteomic analysis of murine cardiomyocytic HL-1 cells treated with siRNA against tissue factor |
| Q36392454 | Data from proteome analysis of Lasiodiplodia theobromae (Botryosphaeriaceae). |
| Q55347023 | Data set on G4 DNA interactions with human proteins. |
| Q64093643 | Data-Driven Analysis of Age, Sex, and Tissue Effects on Gene Expression Variability in Alzheimer's Disease |
| Q46504651 | Day length is a key regulator of transcriptomic responses to both CO(2) and H(2)O(2) in Arabidopsis |
| Q35913385 | De Novo Assembled Wheat Transcriptomes Delineate Differentially Expressed Host Genes in Response to Leaf Rust Infection |
| Q33365298 | De novo Transcriptome Analysis of Miscanthus lutarioriparius Identifies Candidate Genes in Rhizome Development |
| Q34013336 | De novo assembly and characterization of the transcriptome in the desiccation-tolerant moss Syntrichia caninervis. |
| Q28544913 | De novo characterization of fall dormant and nondormant alfalfa (Medicago sativa L.) leaf transcriptome and identification of candidate genes related to fall dormancy |
| Q42094791 | De novo deciphering three-dimensional chromatin interaction and topological domains by wavelet transformation of epigenetic profiles |
| Q34214346 | De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments |
| Q36292121 | De novo sequencing and comparative transcriptome analysis of the male and hermaphroditic flowers provide insights into the regulation of flower formation in andromonoecious taihangia rupestris |
| Q93023425 | De novo transcriptome assembly for four species of crustose coralline algae and analysis of unique orthologous genes |
| Q34955897 | De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana |
| Q35643223 | De novo transcriptome characterization and gene expression profiling of the desiccation tolerant moss Bryum argenteum following rehydration |
| Q60907127 | De novo variants in congenital diaphragmatic hernia identify MYRF as a new syndrome and reveal genetic overlaps with other developmental disorders |
| Q34273872 | De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. |
| Q34193679 | Deciphering membrane-associated molecular processes in target tissue of autoimmune uveitis by label-free quantitative mass spectrometry |
| Q52589101 | Deciphering the mechanism of action of 089, a compound impairing the fungal cell cycle. |
| Q35906431 | Decline of nucleotide excision repair capacity in aging Caenorhabditis elegans |
| Q35759062 | Deep Sequencing of the Scutellaria baicalensis Georgi Transcriptome Reveals Flavonoid Biosynthetic Profiling and Organ-Specific Gene Expression |
| Q33548600 | Deep mRNA sequencing for in vivo functional analysis of cardiac transcriptional regulators: application to Galphaq |
| Q34468250 | Deep sequencing analysis of the transcriptomes of peanut aerial and subterranean young pods identifies candidate genes related to early embryo abortion |
| Q37586259 | Deep transcriptome sequencing of wild halophyte rice, Porteresia coarctata, provides novel insights into the salinity and submergence tolerance factors |
| Q34484664 | Deep-sequencing transcriptome analysis of chilling tolerance mechanisms of a subnival alpine plant, Chorispora bungeana |
| Q41571878 | Deficiency of the Arabidopsis helicase RTEL1 triggers a SOG1-dependent replication checkpoint in response to DNA cross-links. |
| Q60912671 | Defining a Characteristic Gene Expression Set Responsible for Cancer Stem Cell-Like Features in a Sub-Population of Ewing Sarcoma Cells CADO-ES1 |
| Q24810356 | Defining the role of essential genes in human disease |
| Q33556276 | Defining the transcriptomic landscape of the developing enteric nervous system and its cellular environment |
| Q37547128 | Deletion of the human cytomegalovirus US17 gene increases the ratio of genomes per infectious unit and alters regulation of immune and endoplasmic reticulum stress response genes at early and late times after infection. |
| Q36075939 | Delicate Metabolic Control and Coordinated Stress Response Critically Determine Antifungal Tolerance of Candida albicans Biofilm Persisters. |
| Q33807905 | Dengue-2 structural proteins associate with human proteins to produce a coagulation and innate immune response biased interactome |
| Q37366710 | Depletion of Key Meiotic Genes and Transcriptome-Wide Abiotic Stress Reprogramming Mark Early Preparatory Events Ahead of Apomeiotic Transition |
| Q34529297 | Deregulation of the replisome factor MCMBP prompts oncogenesis in colorectal carcinomas through chromosomal instability |
| Q39016648 | Desiccation tolerance in bryophytes: The dehydration and rehydration transcriptomes in the desiccation-tolerant bryophyte Bryum argenteum |
| Q28387627 | Determination of an angiotensin II-regulated proteome in primary human kidney cells by stable isotope labeling of amino acids in cell culture (SILAC) |
| Q38448750 | Determination of testicular function in adolescents with varicocoele - a proteomics approach |
| Q21202033 | Development of a blood-based gene expression algorithm for assessment of obstructive coronary artery disease in non-diabetic patients |
| Q88771039 | Developmental Chromatin Restriction of Pro-Growth Gene Networks Acts as an Epigenetic Barrier to Axon Regeneration in Cortical Neurons |
| Q91651809 | Developmental hypomyelination in Wolfram syndrome: new insights from neuroimaging and gene expression analyses |
| Q42602670 | Developmental-stage-dependent transcriptional response to leukaemic oncogene expression. |
| Q90643292 | Diagnostic and prognostic biomarkers of Human Leukocyte Antigen complex for hepatitis B virus-related hepatocellular carcinoma |
| Q92015470 | Diagnostic and prognostic value of WNT family gene expression in hepatitis B virus‑related hepatocellular carcinoma |
| Q64094687 | Diagnostic and prognostic value of mRNA expression of phospholipase C β family genes in hepatitis B virus‑associated hepatocellular carcinoma |
| Q92015613 | Diagnostic and prognostic values of integrin α subfamily mRNA expression in colon adenocarcinoma |
| Q58798900 | Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave |
| Q36199646 | Dietary Intake Influences Adult Fertility and Offspring Fitness in Zebrafish |
| Q46259551 | Dietary protein sources differentially affect microbiota, mTOR activity and transcription of mTOR signaling pathways in the small intestine |
| Q35884739 | Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks |
| Q36885994 | Different Gene Expression Patterns between Leaves and Flowers in Lonicera japonica Revealed by Transcriptome Analysis |
| Q36381569 | Different adaptation strategies of two citrus scion/rootstock combinations in response to drought stress |
| Q37323863 | Differential Coexpression Analysis Reveals Extensive Rewiring of Arabidopsis Gene Coexpression in Response to Pseudomonas syringae Infection. |
| Q28603345 | Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides |
| Q37625390 | Differential Gene Expression Analysis in Polygonum minus Leaf upon 24 h of Methyl Jasmonate Elicitation. |
| Q92448149 | Differential Gene Expression in Circulating CD14+ Monocytes Indicates the Prognosis of Critically Ill Patients with Sepsis |
| Q38511467 | Differential HIV-1 integration targets more actively transcribed host genes in neonatal than adult blood mononuclear cells |
| Q38715112 | Differential Protein Expression Marks the Transition From Infection With Opisthorchis viverrini to Cholangiocarcinoma |
| Q37236358 | Differential effect of aneuploidy on the X chromosome and genes with sex-biased expression in Drosophila |
| Q91819195 | Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya |
| Q37507953 | Differential gene expression in HIV-infected individuals following ART. |
| Q90799434 | Differential gene expression of Plasmodium homocircumflexum (lineage pCOLL4) across two experimentally infected passerine bird species |
| Q37696403 | Differential gene expression pattern in early gastric cancer by an integrative systematic approach |
| Q37624840 | Differential impact of cumulative SES risk on methylation of protein-protein interaction pathways as a function of SLC6A4 genetic variation in African American young adults |
| Q35566272 | Differential lysine acetylation profiles of Erwinia amylovora strains revealed by proteomics |
| Q92347954 | Differential network analysis and protein-protein interaction study reveals active protein modules in glucocorticoid resistance for infant acute lymphoblastic leukemia |
| Q35844301 | Differential sialotranscriptomes of unfed and fed Rhipicephalus haemaphysaloides, with particular regard to differentially expressed genes of cysteine proteases |
| Q34333397 | Differentially co-expressed interacting protein pairs discriminate samples under distinct stages of HIV type 1 infection |
| Q44390235 | Digital gene expression analysis of early root infection resistance to Sporisorium reilianum f. sp. zeae in maize |
| Q34264690 | Digital gene expression profiling by 5'-end sequencing of cDNAs during reprogramming in the moss Physcomitrella patens |
| Q36194321 | Direct and indirect involvement of microRNA-499 in clinical and experimental cardiomyopathy |
| Q35772040 | Direct production of XY(DMY-) sex reversal female medaka (Oryzias latipes) by embryo microinjection of TALENs |
| Q59758209 | Direct reprogramming of fibroblasts into neural stem cells by single non-neural progenitor transcription factor Ptf1a |
| Q47884228 | Discovering cooperative biomarkers for heterogeneous complex disease diagnoses. |
| Q40210426 | Discovering regulated networks during HIV-1 latency and reactivation |
| Q38466612 | Discovery of genes related to formothion resistance in oriental fruit fly (Bactrocera dorsalis) by a constrained functional genomics analysis. |
| Q34373973 | Discovery of genes related to insecticide resistance in Bactrocera dorsalis by functional genomic analysis of a de novo assembled transcriptome |
| Q33506605 | Disease-aging network reveals significant roles of aging genes in connecting genetic diseases |
| Q36062296 | Dissecting the Root Nodule Transcriptome of Chickpea (Cicer arietinum L.). |
| Q61453962 | Distinct Diagnostic and Prognostic Values of Kinesin Family Member Genes Expression in Patients with Breast Cancer |
| Q59356423 | Distinct Diagnostic and Prognostic Values of Minichromosome Maintenance Gene Expression in Patients with Hepatocellular Carcinoma |
| Q90427320 | Distinct epigenomic and transcriptomic modifications associated with Wolbachia-mediated asexuality |
| Q50003575 | Distinct gene signatures predict insulin resistance in young mice with high fat diet-induced obesity. |
| Q47336310 | Distinct genetic architectures for phenotype means and plasticities in Zea mays. |
| Q64965839 | Distinct leaf transcriptomic response of water deficient Eucalyptus grandis submitted to potassium and sodium fertilization. |
| Q59797742 | Distinct prognostic value of dynactin subunit 4 (DCTN4) and diagnostic value of DCTN1, DCTN2, and DCTN4 in colon adenocarcinoma |
| Q31138121 | Distinct transcriptome responses to water limitation in isohydric and anisohydric grapevine cultivars |
| Q90379945 | Distinctive Gene Expression Patterns Define Endodormancy to Ecodormancy Transition in Apricot and Peach |
| Q45024353 | Dmrta1 regulates proneural gene expression downstream of Pax6 in the mammalian telencephalon |
| Q54589957 | Dosage suppression genetic interaction networks enhance functional wiring diagrams of the cell. |
| Q42679004 | Downregulation of miR‑136‑5p in hepatocellular carcinoma and its clinicopathological significance |
| Q34001835 | Drosophila selenophosphate synthetase 1 regulates vitamin B6 metabolism: prediction and confirmation |
| Q37165403 | Dual Labeling Biotin Switch Assay to Reduce Bias Derived From Different Cysteine Subpopulations: A Method to Maximize S-Nitrosylation Detection. |
| Q42777187 | Dual RNA-Seq of Lysobacter capsici AZ78 - Phytophthora infestans interaction shows the implementation of attack strategies by the bacterium and unsuccessful oomycete defense responses |
| Q36637712 | Dual RNA-Sequencing of Eucalyptus nitens during Phytophthora cinnamomi Challenge Reveals Pathogen and Host Factors Influencing Compatibility. |
| Q48150120 | Dynamic Cytology and Transcriptional Regulation of Rice Lamina Joint Development |
| Q35926193 | Dynamic Proteome Response of Pseudomonas aeruginosa to Tobramycin Antibiotic Treatment |
| Q33740855 | Dynamic chromatin accessibility modeled by Markov process of randomly-moving molecules in the 3D genome |
| Q33719832 | Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy |
| Q47844892 | Dynamic genome wide expression profiling of Drosophila head development reveals a novel role of Hunchback in retinal glia cell development and blood-brain barrier integrity. |
| Q101051283 | Dynamic transcriptional response of Saccharomyces cerevisiae cells to copper |
| Q42778069 | Dynamic transcriptomic analysis in hircine longissimus dorsi muscle from fetal to neonatal development stages |
| Q28395284 | Dynamic zebrafish interactome reveals transcriptional mechanisms of dioxin toxicity |
| Q30706228 | Dynamics of Hippocampal Protein Expression During Long-term Spatial Memory Formation |
| Q40620169 | Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development |
| Q37335359 | Dynamics of the Saccharomyces cerevisiae transcriptome during bread dough fermentation. |
| Q37076334 | Dysregulated signaling hubs of liver lipid metabolism reveal hepatocellular carcinoma pathogenesis |
| Q58618180 | Dysregulation of Neuronal Cholesterol Homeostasis upon Exposure to HIV-1 Tat and Cocaine Revealed by RNA-Sequencing |
| Q36205220 | E2fl1 is a meiosis-specific transcription factor in the protist Tetrahymena thermophila |
| Q88679101 | EB 2017 Article: Soy protein isolate feeding does not result in reproductive toxicity in the pre-pubertal rat testis |
| Q64948860 | EFFECTOR OF TRANSCRIPTION factors are novel plant-specific regulators associated with genomic DNA methylation in Arabidopsis. |
| Q34270499 | ELK1 uses different DNA binding modes to regulate functionally distinct classes of target genes |
| Q49167812 | ERF115 controls root quiescent center cell division and stem cell replenishment. |
| Q28473561 | ESNOQ, proteomic quantification of endogenous S-nitrosation |
| Q33427192 | Early iron-deficiency-induced transcriptional changes in Arabidopsis roots as revealed by microarray analyses |
| Q41457854 | Early markers of Fabry disease revealed by proteomics. |
| Q33361687 | Ectopic expression a tomato KNOX Gene Tkn4 affects the formation and the differentiation of meristems and vasculature |
| Q57459827 | Ectopic expression of ARGOS8 reveals a role for ethylene in root lodging resistance in maize |
| Q38963561 | Effect of prior drought and pathogen stress on Arabidopsis transcriptome changes to caterpillar herbivory. |
| Q38692694 | Effect of social interactions on hippocampal protein expression in animal dominant and submissive model of behavioral disorders |
| Q33735832 | Effects and mechanism of bufei yishen formula in a rat chronic obstructive pulmonary disease model |
| Q47095558 | Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana |
| Q37740757 | Effects of ErbB2 Overexpression on the Proteome and ErbB Ligand-specific Phosphosignaling in Mammary Luminal Epithelial Cells |
| Q34572221 | Effects of early life exposure to ultraviolet C radiation on mitochondrial DNA content, transcription, ATP production, and oxygen consumption in developing Caenorhabditis elegans |
| Q38557763 | Effects of prostratin on Cyclin T1/P-TEFb function and the gene expression profile in primary resting CD4+ T cells |
| Q37270647 | Efficiency of siRNA delivery by lipid nanoparticles is limited by endocytic recycling |
| Q28573682 | Elevated urinary urea by high-protein diet could be one of the inducements of bladder disorders |
| Q28551971 | Elucidation of the Mode of Action of a New Antibacterial Compound Active against Staphylococcus aureus and Pseudomonas aeruginosa |
| Q38030835 | Embryonic stem cell interactomics: the beginning of a long road to biological function |
| Q52629612 | Embryophyte stress signaling evolved in the algal progenitors of land plants. |
| Q61803113 | Emergence of trait variability through the lens of nitrogen assimilation in |
| Q35233616 | Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea. |
| Q59128419 | Endangered Père David's deer genome provides insights into population recovering |
| Q36212013 | Enhanced in planta Fitness through Adaptive Mutations in EfpR, a Dual Regulator of Virulence and Metabolic Functions in the Plant Pathogen Ralstonia solanacearum |
| Q34601554 | Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods |
| Q41863524 | Enrichment Map - a Cytoscape app to visualize and explore OMICs pathway enrichment results |
| Q38490347 | Enrichment map profiling of the cancer invasion front suggests regulation of colorectal cancer progression by the bone morphogenetic protein antagonist, gremlin-1. |
| Q33749961 | Enrichment map: a network-based method for gene-set enrichment visualization and interpretation |
| Q34593379 | Enrichment or depletion of a GO category within a class of genes: which test? |
| Q36007700 | Enrichr: a comprehensive gene set enrichment analysis web server 2016 update |
| Q30575184 | Ensconsin/Map7 promotes microtubule growth and centrosome separation in Drosophila neural stem cells |
| Q37605167 | Epigenetic map and genetic map basis of complex traits in cassava population |
| Q35604314 | Epigenetic reprogramming of melanoma cells by vitamin C treatment |
| Q33687347 | Establishment of a Strong Link Between Smoking and Cancer Pathogenesis through DNA Methylation Analysis |
| Q38978874 | Ethylene Response Factor6 acts as a central regulator of leaf growth under water-limiting conditions in Arabidopsis |
| Q38616452 | Ethylene negatively regulates transcript abundance of ROP-GAP rheostat-encoding genes and affects apoplastic reactive oxygen species homeostasis in epicarps of cold stored apple fruits |
| Q47300921 | Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis. |
| Q42380537 | Ets transcription factor GABP controls T cell homeostasis and immunity |
| Q47102903 | Evaluating the associations between human circadian rhythms and dysregulated genes in liver cancer cells |
| Q64098805 | Evaluation and Interpretation of Transcriptome Data Underlying Heterogeneous Chronic Obstructive Pulmonary Disease |
| Q41769887 | Evaluation and properties of the budding yeast phosphoproteome |
| Q36853162 | Evaluation of proteomic biomarkers associated with circulating microparticles as an effective means to stratify the risk of spontaneous preterm birth |
| Q35979655 | Evaluation of the cell viability of human Wharton's jelly stem cells for use in cell therapy. |
| Q21558375 | Evidence for a Contribution of ALA Synthesis to Plastid-To-Nucleus Signaling |
| Q37724005 | Evidence for salicylic acid signalling and histological changes in the defence response of Eucalyptus grandis to Chrysoporthe austroafricana. |
| Q64250213 | Evolution and Identification of the WRKY Gene Family in Quinoa () |
| Q28741397 | Evolution combined with genomic study elucidates genetic bases of isobutanol tolerance in Escherichia coli |
| Q36410883 | Evolution of DNA-Binding Sites of a Floral Master Regulatory Transcription Factor |
| Q91128930 | Evolution of embryonic cis-regulatory landscapes between divergent Phallusia and Ciona ascidians |
| Q21266673 | Evolutionary dynamics of copy number variation in pig genomes in the context of adaptation and domestication |
| Q36111655 | Evolutionary trends and functional anatomy of the human expanded autophagy network |
| Q35580572 | Examining the evolution of the regulatory circuit controlling secondary metabolism and development in the fungal genus Aspergillus |
| Q35918593 | Exogenous auxin regulates multi-metabolic network and embryo development, controlling seed secondary dormancy and germination in Nicotiana tabacum L |
| Q36097337 | Exome sequencing of a colorectal cancer family reveals shared mutation pattern and predisposition circuitry along tumor pathways |
| Q39967880 | Exosomes Secreted by Apoptosis-Resistant Acute Myeloid Leukemia (AML) Blasts Harbor Regulatory Network Proteins Potentially Involved in Antagonism of Apoptosis |
| Q58161139 | Expanding the horizons of microRNA bioinformatics |
| Q34964704 | Expansion of the human mitochondrial proteome by intra- and inter-compartmental protein duplication |
| Q46370953 | Exploring Amyloidogenicity of Clusterin: A Structural and Bioinformatics Analysis. |
| Q39093184 | Exploring Plant Co-Expression and Gene-Gene Interactions with CORNET 3.0. |
| Q90572097 | Exploring Potential Biomarkers Underlying Pathogenesis of Alzheimer's Disease by Differential Co-expression Analysis |
| Q39120436 | Exploring and challenging the network of angiogenesis. |
| Q49888739 | Exploring autophagy with Gene Ontology. |
| Q45054960 | Exploring biological networks with Cytoscape software |
| Q45702160 | Exploring conserved mRNA-miRNA interactions in colon and lung cancers |
| Q93013535 | Exploring differentially expressed key genes related to development of follicle by RNA-seq in Peking ducks (Anas Platyrhynchos) |
| Q92059247 | Exploring regulatory networks in plants: transcription factors of starch metabolism |
| Q35823177 | Exploring systems affected by the heat shock response in Plasmodium falciparum via protein association networks |
| Q92168473 | Exploring the long noncoding RNAs-based biomarkers and pathogenesis of malignant transformation from dysplasia to oral squamous cell carcinoma by bioinformatics method |
| Q38498511 | Exploring tomato gene functions based on coexpression modules using graph clustering and differential coexpression approaches |
| Q36094181 | Exposure to various abscission-promoting treatments suggests substantial ERF subfamily transcription factors involvement in the regulation of cassava leaf abscission |
| Q37326719 | Expression analysis and in silico characterization of intronic long noncoding RNAs in renal cell carcinoma: emerging functional associations |
| Q36653674 | Expression profiling of mouse subplate reveals a dynamic gene network and disease association with autism and schizophrenia |
| Q24338239 | Extended interaction network of procollagen C-proteinase enhancer-1 in the extracellular matrix |
| Q34421346 | Extensive in vivo metabolite-protein interactions revealed by large-scale systematic analyses |
| Q38431895 | Extra Large G-Protein Interactome Reveals Multiple Stress Response Function and Partner-Dependent XLG Subcellular Localization |
| Q33327570 | Extracting expression modules from perturbational gene expression compendia |
| Q37308487 | FACS purification and transcriptome analysis of drosophila neural stem cells reveals a role for Klumpfuss in self-renewal |
| Q36614060 | FERAL: network-based classifier with application to breast cancer outcome prediction |
| Q34836172 | FLOWERING LOCUS C (FLC) regulates development pathways throughout the life cycle of Arabidopsis. |
| Q34420458 | Factors regulated by interferon gamma and hypoxia-inducible factor 1A contribute to responses that protect mice from Coccidioides immitis infection |
| Q64120885 | Female and male mouse lung group 2 innate lymphoid cells differ in gene expression profiles and cytokine production |
| Q33722886 | Fetal alcohol syndrome, chemo-biology and OMICS: ethanol effects on vitamin metabolism during neurodevelopment as measured by systems biology analysis |
| Q33791393 | Field transcriptome revealed critical developmental and physiological transitions involved in the expression of growth potential in japonica rice |
| Q33517939 | Filling gaps in PPAR-alpha signaling through comparative nutrigenomics analysis. |
| Q39151738 | First-generation HapMap in Cajanus spp. reveals untapped variations in parental lines of mapping populations |
| Q37058151 | Fish and chips: functional genomics of social plasticity in an African cichlid fish |
| Q35842896 | Five omic technologies are concordant in differentiating the biochemical characteristics of the berries of five grapevine (Vitis vinifera L.) cultivars |
| Q35132077 | Footprints of directional selection in wild Atlantic salmon populations: evidence for parasite-driven evolution? |
| Q42778142 | Formation of Staphylococcus aureus Biofilm in the Presence of Sublethal Concentrations of Disinfectants Studied via a Transcriptomic Analysis Using Transcriptome Sequencing (RNA-seq). |
| Q47705268 | Framework for gradual progression of cell ontogeny in the Arabidopsis root meristem |
| Q35130723 | From SNP co-association to RNA co-expression: novel insights into gene networks for intramuscular fatty acid composition in porcine |
| Q55001949 | FunGeneNet: a web tool to estimate enrichment of functional interactions in experimental gene sets. |
| Q39992601 | FunMod: a Cytoscape plugin for identifying functional modules in undirected protein-protein networks |
| Q37143165 | Function annotation of an SBP-box gene in Arabidopsis based on analysis of co-expression networks and promoters |
| Q56889474 | Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant |
| Q52593927 | Functional Genome-wide Screen Identifies Pathways Restricting Central Nervous System Axonal Regeneration. |
| Q91775725 | Functional Translatome Proteomics Reveal Converging and Dose-Dependent Regulation by mTORC1 and eIF2α |
| Q36047289 | Functional analysis and transcriptomic profiling of iPSC-derived macrophages and their application in modeling Mendelian disease |
| Q38297279 | Functional analysis of the nasopharyngeal carcinoma primary tumor‑associated gene interaction network |
| Q34229916 | Functional annotation of hierarchical modularity |
| Q33581372 | Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP. |
| Q37685112 | Functional genomics and networks: new approaches in the extraction of complex gene modules |
| Q30816361 | Functional module search in protein networks based on semantic similarity improves the analysis of proteomics data |
| Q34012502 | Functional network construction in Arabidopsis using rule-based machine learning on large-scale data sets |
| Q30414939 | Functional repertoire, molecular pathways and diseases associated with 3D domain swapping in the human proteome |
| Q38300188 | Functional transcription factor target discovery via compendia of binding and expression profiles. |
| Q53590188 | Fundamentals of Gene Ontology Functional Annotation |
| Q37343906 | Fusarium oxysporum mediates systems metabolic reprogramming of chickpea roots as revealed by a combination of proteomics and metabolomics |
| Q36258523 | Fuzzy-FishNET: a highly reproducible protein complex-based approach for feature selection in comparative proteomics |
| Q34008003 | GO-based functional dissimilarity of gene sets |
| Q30494590 | GOAL: a software tool for assessing biological significance of genes groups. |
| Q36749336 | GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis |
| Q31079264 | GOFFA: gene ontology for functional analysis--a FDA gene ontology tool for analysis of genomic and proteomic data |
| Q91782228 | GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions |
| Q35415233 | GOMMA: a component-based infrastructure for managing and analyzing life science ontologies and their evolution |
| Q38517296 | GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring |
| Q34029470 | GOmotif: A web server for investigating the biological role of protein sequence motifs |
| Q29615019 | GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists |
| Q37168032 | GS2: an efficiently computable measure of GO-based similarity of gene sets |
| Q64059539 | GScluster: network-weighted gene-set clustering analysis |
| Q35182767 | GWAS in a box: statistical and visual analytics of structured associations via GenAMap |
| Q58805027 | GWAS with Heterogeneous Data: Estimating the Fraction of Phenotypic Variation Mediated by Gene Expression Data |
| Q92030319 | GenFam: A web application and database for gene family-based classification and functional enrichment analysis |
| Q58580243 | Gene Co-expression Network Reveals Potential New Genes Related to Sugarcane Bagasse Degradation in RUT-30 |
| Q46613613 | Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms. |
| Q36008773 | Gene and transposable element methylation in great tit (Parus major) brain and blood |
| Q33358602 | Gene coexpression patterns during early development of the native Arabidopsis reproductive meristem: novel candidate developmental regulators and patterns of functional redundancy |
| Q38501925 | Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development. |
| Q64114530 | Gene discovery informatics toolkit defines candidate genes for unexplained infertility and prenatal or infantile mortality |
| Q58037418 | Gene exchange drives the ecological success of a multi-host bacterial pathogen |
| Q38471174 | Gene expression analyses to explore the biomarkers and therapeutic targets for gliomas |
| Q36535637 | Gene expression analysis of a murine model with pulmonary vascular remodeling compared to end-stage IPAH lungs |
| Q36161715 | Gene expression and metabolism preceding soft scald, a chilling injury of 'Honeycrisp' apple fruit |
| Q34743045 | Gene expression in human fungal pathogen Coccidioides immitis changes as arthroconidia differentiate into spherules and mature. |
| Q36051184 | Gene expression meta-analysis reveals immune response convergence on the IFNγ-STAT1-IRF1 axis and adaptive immune resistance mechanisms in lymphoma |
| Q52371356 | Gene expression models based on a reference laboratory strain are poor predictors of Mycobacterium tuberculosis complex transcriptional diversity. |
| Q55497683 | Gene expression profile and cancer-associated pathways linked to progesterone receptor isoform a (PRA) predominance in transgenic mouse mammary glands. |
| Q35865915 | Gene expression profile of adult human olfactory bulb and embryonic neural stem cell suggests distinct signaling pathways and epigenetic control |
| Q37396365 | Gene expression profiles and protein-protein interaction networks in amyotrophic lateral sclerosis patients with C9orf72 mutation |
| Q44414661 | Gene expression profiling and bioinformatics analysis of gastric carcinoma |
| Q38493615 | Gene expression profiling of HGF/Met activation in neonatal mouse heart |
| Q64988673 | Gene expression profiling reveals candidate genes related to residual feed intake in duodenum of laying ducks. |
| Q46301055 | Gene expression signatures of mating system evolution |
| Q33516560 | Gene module identification from microarray data using nonnegative independent component analysis |
| Q58017270 | Gene networks for total number born in pigs across divergent environments |
| Q33528282 | Gene prioritization in Type 2 Diabetes using domain interactions and network analysis |
| Q35462652 | Gene profiling characteristics of radioadaptive response in AG01522 normal human fibroblasts |
| Q34137519 | Gene properties and chromatin state influence the accumulation of transposable elements in genes |
| Q28728105 | Gene regulatory network modeling via global optimization of high-order dynamic Bayesian network |
| Q38440652 | Gene-Category Analysis |
| Q35914072 | GeneTrail--advanced gene set enrichment analysis |
| Q30855863 | GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments |
| Q28118085 | Generation and comprehensive analysis of an influenza virus polymerase cellular interaction network |
| Q27310668 | Genes expressed in grapevine leaves reveal latent wood infection by the fungal pathogen Neofusicoccum parvum |
| Q33303477 | Genes involved in TGF beta1-driven epithelial-mesenchymal transition of renal epithelial cells are topologically related in the human interactome map |
| Q40242235 | Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases |
| Q33387068 | Genetic and systems level analysis of Drosophila sticky/citron kinase and dFmr1 mutants reveals common regulation of genetic networks |
| Q38716264 | Genetic and transcriptomic analyses of lignin- and lodging-related traits in Brassica napus. |
| Q35702641 | Genetic architecture of mouse skin inflammation and tumour susceptibility |
| Q88916516 | Genetic differentiation in life history traits and thermal stress performance across a heterogeneous dune landscape in Arabidopsis lyrata |
| Q92146624 | Genetic polymorphisms and transcription profiles associated with intracranial aneurysm: a key role for NOTCH3 |
| Q92512467 | Genetic signature related to heme-hemoglobin metabolism pathway in sepsis secondary to pneumonia |
| Q92704893 | Genetic variants of the oppA gene are involved in metabolic regulation of surfactin in Bacillus subtilis |
| Q40953648 | Genetic variation and expression changes associated with molybdate resistance from a glutathione producing wine strain of Saccharomyces cerevisiae |
| Q34274331 | Genetic variation and metabolic pathway intricacy govern the active compound content and quality of the Chinese medicinal plant Lonicera japonica thunb |
| Q35605049 | Genetic variation of transgenerational plasticity of offspring germination in response to salinity stress and the seed transcriptome of Medicago truncatula |
| Q36207440 | Genetical genomics identifies the genetic architecture for growth and weevil resistance in spruce |
| Q64102941 | Genome and Ontogenetic-Based Transcriptomic Analyses of the Flesh Fly, |
| Q35951692 | Genome and network visualization facilitates the analyses of the effects of drugs and mutations on protein-protein and drug-protein networks |
| Q37059611 | Genome co-amplification upregulates a mitotic gene network activity that predicts outcome and response to mitotic protein inhibitors in breast cancer |
| Q38516522 | Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription |
| Q35815146 | Genome of the facultative scuticociliatosis pathogen Pseudocohnilembus persalinus provides insight into its virulence through horizontal gene transfer |
| Q30730498 | Genome scale transcriptional response diversity among ten ecotypes of Arabidopsis thaliana during heat stress |
| Q90612603 | Genome sequence of Jatropha curcas L., a non-edible biodiesel plant, provides a resource to improve seed-related traits |
| Q34406263 | Genome structures and transcriptomes signify niche adaptation for the multiple-ion-tolerant extremophyte Schrenkiella parvula |
| Q33375045 | Genome wide identification of recessive cancer genes by combinatorial mutation analysis |
| Q39452715 | Genome wide transcriptome profiling of Fusarium oxysporum f sp. ciceris conidial germination reveals new insights into infection-related genes |
| Q37642015 | Genome-Wide Association and Transcriptome Analyses Reveal Candidate Genes Underlying Yield-determining Traits in Brassica napus |
| Q37277395 | Genome-Wide Gene/Genome Dosage Imbalance Regulates Gene Expressions in Synthetic Brassica napus and Derivatives (AC, AAC, CCA, CCAA). |
| Q48124042 | Genome-Wide Identification and Expression Analysis of the HD-Zip Gene Family in Wheat (Triticum aestivum L.). |
| Q57166567 | Genome-Wide Investigation of the Role of MicroRNAs in Desiccation Tolerance in the Resurrection Grass |
| Q91644090 | Genome-Wide Profiling Reveals the Landscape of Prognostic Alternative Splicing Signatures in Pancreatic Ductal Adenocarcinoma |
| Q28315011 | Genome-level identification of targets of Hox protein Ultrabithorax in Drosophila: novel mechanisms for target selection |
| Q35023929 | Genome-scale cold stress response regulatory networks in ten Arabidopsis thaliana ecotypes |
| Q64081843 | Genome-scale integrated analysis to identify prospective molecular mechanisms and therapeutic targets in isocitrate dehydrogenase 2 R140Q-mutated acute myeloid leukemia |
| Q64095989 | Genome-wide Analysis of bZIP Transcription Factors in wheat and Functional Characterization of a TabZIP under Abiotic Stress |
| Q35993653 | Genome-wide DNA polymorphisms in Kavuni, a traditional rice cultivar with nutritional and therapeutic properties |
| Q37141100 | Genome-wide Identification and Structural, Functional and Evolutionary Analysis of WRKY Components of Mulberry |
| Q92918563 | Genome-wide alternative splicing landscapes modulated by biotrophic sugarcane smut pathogen |
| Q64247989 | Genome-wide analysis and identification of the low potassium stress responsive gene SiMYB3 in foxtail millet (Setariaitalica L.) |
| Q38305247 | Genome-wide analysis of gene expression in human embryonic tooth germ |
| Q38356330 | Genome-wide analysis of genes targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during seed germination in Arabidopsis |
| Q34171188 | Genome-wide analysis of histone modifications in latently HIV-1 infected T cells. |
| Q39390097 | Genome-wide analysis of long intergenic non-coding RNAs in chickpea and their potential role in flower development |
| Q28648066 | Genome-wide analysis reveals diverged patterns of codon bias, gene expression, and rates of sequence evolution in picea gene families |
| Q33362696 | Genome-wide analysis, expression dynamics and varietal comparison of NAC gene family at various developmental stages in Morus notabilis |
| Q40911639 | Genome-wide association analysis and differential expression analysis of resistance to Sclerotinia stem rot in Brassica napus |
| Q55437173 | Genome-wide bisulphite-sequencing reveals organ-specific methylation patterns in chickpea. |
| Q36093355 | Genome-wide characterization of non-reference transposons in crops suggests non-random insertion |
| Q35036891 | Genome-wide computational prediction and analysis of core promoter elements across plant monocots and dicots |
| Q35118627 | Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea. |
| Q31029117 | Genome-wide expression analysis offers new insights into the origin and evolution of Physcomitrella patens stress response |
| Q27932529 | Genome-wide functional profiling identifies genes and processes important for zinc-limited growth of Saccharomyces cerevisiae |
| Q36008225 | Genome-wide identification of CCA1 targets uncovers an expanded clock network in Arabidopsis |
| Q37215800 | Genome-wide identification of cassava R2R3 MYB family genes related to abscission zone separation after environmental-stress-induced abscission |
| Q34160740 | Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulation |
| Q90010231 | Genome-wide mining of microsatellites in king cobra (Ophiophagus hannah) and cross-species development of tetranucleotide SSR markers in Chinese cobra (Naja atra) |
| Q93133601 | Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex |
| Q33354965 | Genome-wide occupancy of SREBP1 and its partners NFY and SP1 reveals novel functional roles and combinatorial regulation of distinct classes of genes |
| Q34569322 | Genome-wide screen for inositol auxotrophy in Saccharomyces cerevisiae implicates lipid metabolism in stress response signaling |
| Q34622310 | Genome-wide screening and functional analysis identify a large number of long noncoding RNAs involved in the sexual reproduction of rice |
| Q37436059 | Genome-wide transcriptome analysis revealed organelle specific responses to temperature variations in algae |
| Q38688763 | Genome-wide transcriptome profiling of Carica papaya L. embryogenic callus. |
| Q39099446 | Genomewide discovery of DNA polymorphisms in rice cultivars with contrasting drought and salinity stress response and their functional relevance |
| Q38562247 | Genomewide effects of peroxisome proliferator-activated receptor gamma in macrophages and dendritic cells--revealing complexity through systems biology |
| Q92738235 | Genome‑wide investigation of the clinical implications and molecular mechanism of long noncoding RNA LINC00668 and protein‑coding genes in hepatocellular carcinoma |
| Q92477508 | Genomic Integrity Safeguards Self-Renewal in Embryonic Stem Cells |
| Q34477690 | Genomic analysis reveals selection for Asian genes in European pigs following human-mediated introgression |
| Q92860453 | Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complex |
| Q57539937 | Genomic distribution of maize facultative heterochromatin marked by trimethylation of H3K27 |
| Q41176225 | Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species. |
| Q28756138 | Genomic organization and evolutionary conservation of plant D-type cyclins |
| Q34042227 | Genomic phenotyping of the essential and non-essential yeast genome detects novel pathways for alkylation resistance. |
| Q33263956 | Genomic variation in rice: genesis of highly polymorphic linkage blocks during domestication |
| Q35888612 | Genomics and successful aging: grounds for renewed optimism? |
| Q36185468 | Genomics of estradiol-3-sulfate action in the ovine fetal hypothalamus |
| Q37054704 | Genomics of the fetal hypothalamic cellular response to transient hypoxia: endocrine, immune, and metabolic responses |
| Q64387225 | Genotoxicity of zinc oxide nanoparticles: an and study |
| Q38601592 | Genotype-specific physiological and transcriptomic responses to drought stress in Setaria italica (an emerging model for Panicoideae grasses) |
| Q48090136 | Gibberellin Signaling Requires Chromatin Remodeler PICKLE to Promote Vegetative Growth and Phase Transitions. |
| Q92344173 | Gibberellin causes wide transcriptional modifications in the early stage of grape cluster development |
| Q36281674 | Glioblastoma-derived Macrophage Colony-stimulating Factor (MCSF) Induces Microglial Release of Insulin-like Growth Factor-binding Protein 1 (IGFBP1) to Promote Angiogenesis |
| Q30573111 | Global DNA methylation and transcriptional analyses of human ESC-derived cardiomyocytes |
| Q52316661 | Global H3.3 dynamic deposition defines its bimodal role in cell fate transition. |
| Q36303047 | Global analysis of WRKY transcription factor superfamily in Setaria identifies potential candidates involved in abiotic stress signaling |
| Q35127703 | Global analysis of the Gossypium hirsutum L. Transcriptome during leaf senescence by RNA-Seq. |
| Q35927833 | Global analysis of the developmental dynamics of Gossypium hirsutum based on strand-specific transcriptome |
| Q50642068 | Global characterization of cell-specific gene expression through fluorescence-activated sorting of nuclei. |
| Q57810073 | Global expression profiling and pathway analysis in two different population groups in relation to high altitude |
| Q27316952 | Global genetic analysis in mice unveils central role for cilia in congenital heart disease |
| Q51112512 | Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis). |
| Q95320577 | Global responses to oxytetracycline treatment in tetracycline-resistant Escherichia coli |
| Q35089248 | Global secretome characterization of A549 human alveolar epithelial carcinoma cells during Mycoplasma pneumoniae infection |
| Q24653446 | Global sequencing of proteolytic cleavage sites in apoptosis by specific labeling of protein N termini |
| Q33257304 | Global similarity and local divergence in human and mouse gene co-expression networks |
| Q34708097 | Global transcriptome analysis of developing chickpea (Cicer arietinum L.) seeds |
| Q91151655 | Global transcriptome analysis of rat hypothalamic arcuate nucleus demonstrates reversal of hypothalamic gliosis following surgically and diet induced weight loss |
| Q36280839 | Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii |
| Q47204438 | Global transcriptome and coexpression network analyses reveal cultivar-specific molecular signatures associated with seed development and seed size/weight determination in chickpea. |
| Q35721511 | Global transcriptome and gene regulation network for secondary metabolite biosynthesis of tea plant (Camellia sinensis). |
| Q37020385 | Glucocorticoids suppress T cell function by up-regulating microRNA-98 |
| Q90494652 | Glucose-Mediated Repression of Plant Biomass Utilization in the White-Rot Fungus Dichomitus squalens |
| Q33850638 | Glycoproteomic analysis of prostate cancer tissues by SWATH mass spectrometry discovers N-acylethanolamine acid amidase and protein tyrosine kinase 7 as signatures for tumor aggressiveness. |
| Q51822041 | Gradual increase of miR156 regulates temporal expression changes of numerous genes during leaf development in rice. |
| Q36559066 | Grapevine Rootstocks Differentially Affect the Rate of Ripening and Modulate Auxin-Related Genes in Cabernet Sauvignon Berries. |
| Q38513822 | GraphWeb: mining heterogeneous biological networks for gene modules with functional significance |
| Q45245844 | Grass microRNA gene paleohistory unveils new insights into gene dosage balance in subgenome partitioning after whole-genome duplication. |
| Q34204664 | Gravitational and magnetic field variations synergize to cause subtle variations in the global transcriptional state of Arabidopsis in vitro callus cultures |
| Q92511216 | Head Start Immunity: Characterizing the Early Protection of C Strain Vaccine Against Subsequent Classical Swine Fever Virus Infection |
| Q35229251 | Hepatic transcriptomic profiling reveals early toxicological mechanisms of uranium in Atlantic salmon (Salmo salar) |
| Q33242810 | Heterotachy in mammalian promoter evolution |
| Q92192246 | High density is a property of slow-cycling and treatment-resistant human glioblastoma cells |
| Q35927642 | High frequency of +1 programmed ribosomal frameshifting in Euplotes octocarinatus |
| Q33456116 | High hydrostatic pressure activates transcription factors involved in Saccharomyces cerevisiae stress tolerance |
| Q28548262 | High-Throughput Sequencing and De Novo Assembly of Red and Green Forms of the Perilla frutescens var. crispa Transcriptome |
| Q40531683 | High-Throughput Tag-Sequencing Analysis of Early Events Induced by Ochratoxin A in HepG-2 Cells |
| Q51875532 | High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. |
| Q39515886 | High-resolution transcript profiling of the atypical biotrophic interaction between Theobroma cacao and the fungal pathogen Moniliophthora perniciosa |
| Q37036734 | High-throughput sequencing reveals principles of adeno-associated virus serotype 2 integration |
| Q37644024 | Highly divergent integration profile of adeno-associated virus serotype 5 revealed by high-throughput sequencing. |
| Q92932217 | Histidine kinase MHZ1/OsHK1 interacts with ethylene receptors to regulate root growth in rice |
| Q49168731 | Histone H2B monoubiquitination is required to reach maximal transcript levels of circadian clock genes in Arabidopsis. |
| Q36388005 | Histone H3 lysine 36 methylation affects temperature-induced alternative splicing and flowering in plants |
| Q47862474 | Histone acetyltransferase general control non-repressed protein 5 (GCN5) affects the fatty acid composition of Arabidopsis thaliana seeds by acetylating fatty acid desaturase3 (FAD3). |
| Q28647254 | Horsetails Are Ancient Polyploids: Evidence from Equisetum giganteum |
| Q50052946 | Host-Virus Protein Interaction Network Reveals the Involvement of Multiple Host Processes in the Life Cycle of Hepatitis E Virus. |
| Q38236577 | How to learn about gene function: text-mining or ontologies? |
| Q61448057 | Hub genes and gene functions associated with postmenopausal osteoporosis predicted by an integrated method |
| Q30009920 | Human 14-3-3 paralogs differences uncovered by cross-talk of phosphorylation and lysine acetylation |
| Q30274627 | Human Nup98 regulates the localization and activity of DExH/D-box helicase DHX9 |
| Q28472174 | Human cancer protein-protein interaction network: a structural perspective |
| Q92235439 | Human chromatin remodeler cofactor, RNA interactor, eraser and writer sperm RNAs responding to obesity |
| Q33886711 | Human cytomegalovirus IE1 protein elicits a type II interferon-like host cell response that depends on activated STAT1 but not interferon-γ |
| Q34938931 | Human growth is associated with distinct patterns of gene expression in evolutionarily conserved networks. |
| Q33518904 | Human synthetic lethal inference as potential anti-cancer target gene detection |
| Q45611249 | Huntington's Disease iPSC-Derived Brain Microvascular Endothelial Cells Reveal WNT-Mediated Angiogenic and Blood-Brain Barrier Deficits |
| Q36408006 | Hyperactivity of the Ero1α oxidase elicits endoplasmic reticulum stress but no broad antioxidant response |
| Q33571909 | Hyperglycemia alters the schwann cell mitochondrial proteome and decreases coupled respiration in the absence of superoxide production |
| Q43462854 | Hypoxia tolerance, longevity and cancer-resistance in the mole rat Spalax - a liver transcriptomics approach |
| Q90010481 | IDPpi: Protein-Protein Interaction Analyses of Human Intrinsically Disordered Proteins |
| Q27316130 | IFNs Modify the Proteome of Legionella-Containing Vacuoles and Restrict Infection Via IRG1-Derived Itaconic Acid |
| Q35861973 | IL-10 Production in Macrophages Is Regulated by a TLR-Driven CREB-Mediated Mechanism That Is Linked to Genes Involved in Cell Metabolism |
| Q64928806 | INBIA: a boosting methodology for proteomic network inference. |
| Q92509718 | ITGA6 and RPSA synergistically promote pancreatic cancer invasion and metastasis via PI3K and MAPK signaling pathways |
| Q39468078 | Identification and Validation of Selected Universal Stress Protein Domain Containing Drought-Responsive Genes in Pigeonpea (Cajanus cajan L.). |
| Q97074965 | Identification and Verification of Biomarker in Clear Cell Renal Cell Carcinoma via Bioinformatics and Neural Network Model |
| Q21184099 | Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates |
| Q90330814 | Identification and profiling of microRNAs and differentially expressed genes during anther development between a genetic male-sterile mutant and its wildtype cotton via high-throughput RNA sequencing |
| Q33906854 | Identification of 14-3-3β in human gastric cancer cells and its potency as a diagnostic and prognostic biomarker |
| Q21999709 | Identification of 491 proteins in the tear fluid proteome reveals a large number of proteases and protease inhibitors |
| Q35678726 | Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis |
| Q40602821 | Identification of Genes in Candida glabrata Conferring Altered Responses to Caspofungin, a Cell Wall Synthesis Inhibitor. |
| Q33878115 | Identification of HDA15-PIF1 as a key repression module directing the transcriptional network of seed germination in the dark |
| Q33613499 | Identification of HIV-1 Tat-Associated Proteins Contributing to HIV-1 Transcription and Latency |
| Q94463937 | Identification of Hub Genes Related to Carcinogenesis and Prognosis in Colorectal Cancer Based on Integrated Bioinformatics |
| Q38615448 | Identification of Nidogen 1 as a lung metastasis protein through secretome analysis |
| Q64119030 | Identification of Potential Candidate Genes of Oral Cancer in Response to Chronic Infection With Using Bioinformatical Analyses |
| Q50351898 | Identification of Shared Molecular Signatures Indicate the Susceptibility of Endometriosis to Multiple Sclerosis. |
| Q42146678 | Identification of a complex genetic network underlying Saccharomyces cerevisiae colony morphology. |
| Q41874973 | Identification of a neuronal transcription factor network involved in medulloblastoma development |
| Q30482806 | Identification of a set of genes showing regionally enriched expression in the mouse brain |
| Q93140608 | Identification of a thymus microRNA‑mRNA regulatory network in Down syndrome |
| Q38466171 | Identification of biological processes and genes for gestational diabetes mellitus |
| Q45326646 | Identification of candidate effector genes in the transcriptome of the rice root knot nematode Meloidogyne graminicola. |
| Q52564763 | Identification of candidate resistance genes of cotton against Aspergillus flavus infection using a comparative transcriptomics approach. |
| Q37452961 | Identification of cis-regulatory elements in gene co-expression networks using A-GLAM. |
| Q37720229 | Identification of crucial genes associated with rat traumatic spinal cord injury |
| Q90087556 | Identification of differentially expressed genes between primary lung cancer and lymph node metastasis via bioinformatic analysis |
| Q60049436 | Identification of differentially expressed miRNAs in early-stage cervical cancer with lymph node metastasis across The Cancer Genome Atlas datasets |
| Q31161170 | Identification of dilated cardiomyopathy signature genes through gene expression and network data integration |
| Q100635122 | Identification of epigenetic variation associated with synchronous pod maturity in mungbean (Vigna radiata L.). |
| Q89951202 | Identification of frailty-associated genes by coordination analysis of gene expression |
| Q30801881 | Identification of functional modules by integration of multiple data sources using a Bayesian network classifier |
| Q47811759 | Identification of genes associated with castration‑resistant prostate cancer by gene expression profile analysis |
| Q37616960 | Identification of human tissue kallikrein 6 as a potential marker of laryngeal cancer based on the relevant secretory/releasing protein database |
| Q90705701 | Identification of key biomarkers and potential molecular mechanisms in lung cancer by bioinformatics analysis |
| Q91739114 | Identification of key candidate genes and pathways in endometrial cancer: Evidence from bioinformatics analysis |
| Q58762357 | Identification of key genes and associated pathways in KIT/PDGFRA wild‑type gastrointestinal stromal tumors through bioinformatics analysis |
| Q91584613 | Identification of key genes and evaluation of clinical outcomes in lung squamous cell carcinoma using integrated bioinformatics analysis |
| Q31044596 | Identification of key genes associated with gastric cancer based on DNA microarray data |
| Q47155974 | Identification of key genes influenced by fixation stability in early fracture hematoma and elucidation of their roles in fracture healing |
| Q34099056 | Identification of lactoferricin B intracellular targets using an Escherichia coli proteome chip |
| Q93173548 | Identification of lung adenocarcinoma biomarkers based on bioinformatic analysis and human samples |
| Q92582455 | Identification of microRNAs associated with the aggressiveness of prolactin pituitary tumors using bioinformatic analysis |
| Q47126103 | Identification of new genes associated to senescent and tumorigenic phenotypes in mesenchymal stem cells. |
| Q28485040 | Identification of new protein interactions between dengue fever virus and its hosts, human and mosquito |
| Q92696826 | Identification of novel biomarkers and candidate small molecule drugs in non-small-cell lung cancer by integrated microarray analysis |
| Q92009016 | Identification of novel biomarkers and small molecule drugs in human colorectal cancer by microarray and bioinformatics analysis |
| Q41957763 | Identification of novel in vivo MAP kinase substrates in Arabidopsis thaliana through use of tandem metal oxide affinity chromatography |
| Q41771922 | Identification of nuclear phosphatidylinositol 4,5-bisphosphate-interacting proteins by neomycin extraction |
| Q33355978 | Identification of pathways directly regulated by SHORT VEGETATIVE PHASE during vegetative and reproductive development in Arabidopsis. |
| Q38430542 | Identification of potential crucial genes associated with early-onset pre-eclampsia via a microarray analysis |
| Q36624053 | Identification of potential therapeutic targets for lung cancer by bioinformatics analysis |
| Q36502331 | Identification of potential therapeutic targets for papillary thyroid carcinoma by bioinformatics analysis |
| Q61807260 | Identification of prognostic biomarkers for patients with hepatocellular carcinoma after hepatectomy |
| Q37137135 | Identification of protein complexes from multi-relationship protein interaction networks |
| Q40217830 | Identification of putative androgen receptor interaction protein modules: cytoskeleton and endosomes modulate androgen receptor signaling in prostate cancer cells |
| Q55429283 | Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits. |
| Q52399855 | Identification of regenerative roadblocks via repeat deployment of limb regeneration in axolotls. |
| Q42011407 | Identification of regions of positive selection using Shared Genomic Segment analysis |
| Q92487152 | Identification of significant gene and pathways involved in HBV-related hepatocellular carcinoma by bioinformatics analysis |
| Q47155299 | Identification of the PAK4 interactome reveals PAK4 phosphorylation of N-WASP and promotion of Arp2/3-dependent actin polymerization |
| Q39042417 | Identification of the PKR nuclear interactome reveals roles in ribosome biogenesis, mRNA processing and cell division |
| Q91785346 | Identification of time‑series differentially expressed genes and pathways associated with heart failure post‑myocardial infarction using integrated bioinformatics analysis |
| Q33511020 | Identification of tyrosine-phosphorylated proteins associated with metastasis and functional analysis of FER in human hepatocellular carcinoma cells |
| Q47094988 | Identifications of potential therapeutic targets and drugs in angiotensin II-induced hypertension |
| Q92996884 | Identify potential clinical significance of long noncoding RNA forkhead box P4 antisense RNA 1 in patients with early stage pancreatic ductal adenocarcinoma |
| Q47599775 | Identifying Gene Interaction Networks |
| Q38447255 | Identifying a biomarker network for corticosteroid resistance in asthma from bronchoalveolar lavage samples. |
| Q34189032 | Identifying core features of adaptive metabolic mechanisms for chronic heat stress attenuation contributing to systems robustness. |
| Q51750394 | Identifying gene expression profile of spinal cord injury in rat by bioinformatics strategy. |
| Q38498519 | Identifying gene interaction networks |
| Q35068968 | Identifying potential cancer driver genes by genomic data integration |
| Q57173968 | Idiopathic Scoliosis Families Highlight Actin-Based and Microtubule-Based Cellular Projections and Extracellular Matrix in Disease Etiology |
| Q38626906 | Immuno-Oncology Integrative Networks: Elucidating the Influences of Osteosarcoma Phenotypes |
| Q91843996 | Immunomodulation with Human Umbilical Cord Blood Stem Cells Ameliorates Ischemic Brain Injury - A Brain Transcriptome Profiling Analysis |
| Q35174360 | Impacts of nucleotide fixation during soybean domestication and improvement |
| Q38929177 | Impacts of the overexpression of a tomato translationally controlled tumor protein (TCTP) in tobacco revealed by phenotypic and transcriptomic analysis |
| Q36674866 | Impaired tissue regeneration corresponds with altered expression of developmental genes that persists in the metabolic memory state of diabetic zebrafish |
| Q53589942 | Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology |
| Q39704771 | Improving reverse vaccinology with a machine learning approach. |
| Q36224835 | In silico analysis of the molecular mechanism of postmenopausal osteoporosis |
| Q64056704 | In silico prediction of housekeeping long intergenic non-coding RNAs reveals HKlincR1 as an essential player in lung cancer cell survival |
| Q90643609 | In utero and lactational 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) exposure exacerbates urinary dysfunction in hormone-treated C57BL/6J mice through a non-malignant mechanism involving proteomic changes in the prostate that differ from those elicit |
| Q89642090 | In-depth PtdIns(3,4,5)P3 signalosome analysis identifies DAPP1 as a negative regulator of GPVI-driven platelet function |
| Q42829480 | In-depth analysis of the adipocyte proteome by mass spectrometry and bioinformatics |
| Q36801814 | Inbreeding Affects Gene Expression Differently in Two Self-Incompatible Arabidopsis lyrata Populations with Similar Levels of Inbreeding Depression |
| Q48173189 | Increased Phosphorylation of Ser-Gln Sites on SUPPRESSOR OF GAMMA RESPONSE1 Strengthens the DNA Damage Response in Arabidopsis thaliana |
| Q34466120 | Increased expression of fatty acid binding protein 4 and leptin in resident macrophages characterises atherosclerotic plaque rupture |
| Q42164307 | Increased leaf size: different means to an end. |
| Q44664369 | Increased transcriptional and metabolic capacity for lipid metabolism in the peripheral zone of the prostate may underpin its increased susceptibility to cancer. |
| Q46507221 | Individual and molecular level effects of produced water contaminants on nauplii and adult females of Calanus finmarchicus |
| Q38498315 | Infection Strategies of Bacterial and Viral Pathogens through Pathogen-Human Protein-Protein Interactions |
| Q55330700 | Infection by a Giant Virus (AaV) Induces Widespread Physiological Reprogramming in Aureococcus anophagefferens CCMP1984 - A Harmful Bloom Algae. |
| Q33834457 | Inference of cancer-specific gene regulatory networks using soft computing rules |
| Q40973379 | Inference of the Arabidopsis lateral root gene regulatory network suggests a bifurcation mechanism that defines primordia flanking and central zones |
| Q33284252 | Inferring biological networks with output kernel trees |
| Q44146916 | Inferring the regulatory interaction models of transcription factors in transcriptional regulatory networks |
| Q28658016 | Inferring the relation between transcriptional and posttranscriptional regulation from expression compendia |
| Q33507905 | Inferring the transcriptional landscape of bovine skeletal muscle by integrating co-expression networks |
| Q35101999 | Inferring transcription factor collaborations in gene regulatory networks |
| Q36310551 | Influence of a pre-stimulation with chronic low-dose UVB on stress response mechanisms in human skin fibroblasts |
| Q59793071 | Inhibition of TOR Represses Nutrient Consumption, Which Improves Greening after Extended Periods of Etiolation |
| Q58549164 | Inhibition of histone methyltransferase EZH2 in Schistosoma mansoni in vitro by GSK343 reduces egg laying and decreases the expression of genes implicated in DNA replication and noncoding RNA metabolism |
| Q37554302 | Insecticide resistance mechanisms associated with different environments in the malaria vector Anopheles gambiae: a case study in Tanzania |
| Q35671608 | Insight into bacterial virulence mechanisms against host immune response via the Yersinia pestis-human protein-protein interaction network |
| Q38683231 | Insight into synergetic mechanisms of tetracycline and the selective serotonin reuptake inhibitor, sertraline, in a tetracycline-resistant strain of Escherichia coli |
| Q39118882 | Insights into Diabetic Kidney Disease Using Urinary Proteomics and Bioinformatics |
| Q51072922 | Insights into pathophysiology of dystropy through the analysis of gene networks: an example of bronchial asthma and tuberculosis. |
| Q33759927 | Insights into the molecular mechanisms of Polygonum multiflorum Thunb-induced liver injury: a computational systems toxicology approach |
| Q36127680 | Integrated Analysis of DNA Methylation and mRNA Expression Profiles Data to Identify Key Genes in Lung Adenocarcinoma. |
| Q98735779 | Integrated Bioinformatics Analysis Reveals Key Candidate Genes and Pathways Associated With Clinical Outcome in Hepatocellular Carcinoma |
| Q35527047 | Integrated RNA-Seq and sRNA-Seq Analysis Identifies Chilling and Freezing Responsive Key Molecular Players and Pathways in Tea Plant (Camellia sinensis). |
| Q38816975 | Integrated RNA-seq and sRNA-seq analysis reveals miRNA effects on secondary metabolism in Solanum tuberosum L. |
| Q33794308 | Integrated analysis and transcript abundance modelling of H3K4me3 and H3K27me3 in developing secondary xylem. |
| Q57173113 | Integrated analysis of a competing endogenous RNA network reveals key lncRNAs as potential prognostic biomarkers for human bladder cancer |
| Q91756615 | Integrated analysis of competing endogenous RNA network revealing potential prognostic biomarkers of hepatocellular carcinoma |
| Q61446840 | Integrated analysis of lncRNA-associated ceRNA network reveals potential biomarkers for the prognosis of hepatitis B virus-related hepatocellular carcinoma |
| Q92480202 | Integrated analysis of lncRNA-miRNA-mRNA ceRNA network in squamous cell carcinoma of tongue |
| Q42638788 | Integrated analysis of numerous heterogeneous gene expression profiles for detecting robust disease-specific biomarkers and proposing drug targets |
| Q93096472 | Integrated analysis of the critical region 5p15.3-p15.2 associated with cri-du-chat syndrome |
| Q42132235 | Integrated analysis, transcriptome-lipidome, reveals the effects of INO-level (INO2 and INO4) on lipid metabolism in yeast |
| Q37743528 | Integrated mRNA and lncRNA expression profiling for exploring metastatic biomarkers of human intrahepatic cholangiocarcinoma |
| Q28652732 | Integrated network analysis and effective tools in plant systems biology. |
| Q36339900 | Integrated network analysis reveals potentially novel molecular mechanisms and therapeutic targets of refractory epilepsies |
| Q37706632 | Integrated proteomic and N-glycoproteomic analyses of doxorubicin sensitive and resistant ovarian cancer cells reveal glycoprotein alteration in protein abundance and glycosylation |
| Q43795085 | Integrated transcriptome analysis reveals miRNA-mRNA crosstalk in laryngeal squamous cell carcinoma. |
| Q64077853 | Integrated transcriptome and in vitro analysis revealed anti-proliferative effect of citral in human stomach cancer through apoptosis |
| Q47233426 | Integrated transcriptomic analysis of Trichosporon Asahii uncovers the core genes and pathways of fluconazole resistance |
| Q33556521 | Integrated transcriptomics and metabolomics decipher differences in the resistance of pedunculate oak to the herbivore Tortrix viridana L. |
| Q33820309 | Integrating 3-omics data analyze rat lung tissue of COPD states and medical intervention by delineation of molecular and pathway alterations |
| Q37739257 | Integrating Transcriptomics, Proteomics, and Metabolomics Profiling with System Pharmacology for the Delineation of Long-Term Therapeutic Mechanisms of Bufei Jianpi Formula in Treating COPD |
| Q33488155 | Integrating proteomic, transcriptional, and interactome data reveals hidden components of signaling and regulatory networks |
| Q34500054 | Integrating the interactome and the transcriptome of Drosophila |
| Q28681323 | Integration of biological networks and gene expression data using Cytoscape |
| Q47639229 | Integration of transcriptomics, proteomics, metabolomics and systems pharmacology data to reveal the therapeutic mechanism underlying Chinese herbal Bufei Yishen formula for the treatment of chronic obstructive pulmonary disease |
| Q64102062 | Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis |
| Q104581352 | Integrative Multi-omics Analyses of Barley Rootzones under Salinity Stress Reveal Two Distinctive Salt Tolerance Mechanisms |
| Q36745073 | Integrative Network Analysis Combined with Quantitative Phosphoproteomics Reveals Transforming Growth Factor-beta Receptor type-2 (TGFBR2) as a Novel Regulator of Glioblastoma Stem Cell Properties |
| Q52564621 | Integrative Transcriptomic Analysis Uncovers Novel Gene Modules That Underlie the Sulfate Response in Arabidopsis thaliana. |
| Q92629757 | Integrative Transcriptomic and Proteomic Analyses of Molecular Mechanism Responding to Salt Stress during Seed Germination in Hulless Barley |
| Q36102667 | Integrative analyses reveal transcriptome-proteome correlation in biological pathways and secondary metabolism clusters in A. flavus in response to temperature |
| Q36099626 | Integrative analysis of human protein, function and disease networks |
| Q49589296 | Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle. |
| Q90119669 | Integrative analysis of the contribution of mRNAs and long non‑coding RNAs to the pathogenesis of asthma |
| Q37537989 | Integrative gene network construction to analyze cancer recurrence using semi-supervised learning |
| Q33812938 | Integrative identification of Arabidopsis mitochondrial proteome and its function exploitation through protein interaction network |
| Q29248288 | Integrative meta-analysis identifies microRNA-regulated networks in infantile hemangioma |
| Q35560646 | Integrative multi-omics module network inference with Lemon-Tree |
| Q52309496 | Integrative network analyses of wilt transcriptome in chickpea reveal genotype dependent regulatory hubs in immunity and susceptibility. |
| Q35817496 | Integrative network analysis for survival-associated gene-gene interactions across multiple genomic profiles in ovarian cancer. |
| Q37357305 | Interaction between inflammatory mediators and miRNAs in Helicobacter pylori infection |
| Q37345367 | Interactome-transcriptome analysis discovers signatures complementary to GWAS Loci of Type 2 Diabetes |
| Q21129288 | Interactomic and pharmacological insights on human sirt-1 |
| Q38479538 | Interactomics of Qa-SNARE in Arabidopsis thaliana |
| Q37726558 | Interinstitutional collaboration for end-user bioinformatics training: Cytoscape as a case study. |
| Q35757188 | Intermediate Tyrosyl Radical and Amyloid Structure in Peroxide-Activated Cytoglobin. |
| Q53276521 | Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations. |
| Q41591763 | Intracellular spectral recompositioning of light enhances algal photosynthetic efficiency |
| Q92095495 | Intratumor δ-catenin heterogeneity driven by genomic rearrangement dictates growth factor dependent prostate cancer progression |
| Q64972372 | Investigating the dysfunctional pathogenesis of Wilms' tumor through a multidimensional integration strategy. |
| Q42775803 | Investigating the molecular underpinnings underlying morphology and changes in carbon partitioning during tension wood formation in Eucalyptus. |
| Q21245636 | Investigation of PARP-1, PARP-2, and PARG interactomes by affinity-purification mass spectrometry |
| Q35049696 | Investigation of Pokemon-regulated proteins in hepatocellular carcinoma using mass spectrometry-based multiplex quantitative proteomics |
| Q37707011 | Investigation of maternal genotype effects in autism by genome-wide association |
| Q38509261 | Isobaric labeling and tandem mass spectrometry: a novel approach for profiling and quantifying proteins differentially expressed in amniotic fluid in preterm labor with and without intra-amniotic infection/inflammation |
| Q38357914 | Isolation stress for 30 days alters hepatic gene expression profiles, especially with reference to lipid metabolism in mice |
| Q38303472 | Jasmonoyl-L-isoleucine coordinates metabolic networks required for anthesis and floral attractant emission in wild tobacco (Nicotiana attenuata). |
| Q58559687 | K66 Killer System Evidences Expanded Assortment of Helper and Satellite Viruses |
| Q34078162 | KEGGscape: a Cytoscape app for pathway data integration |
| Q58722010 | KLF6 and STAT3 co-occupy regulatory DNA and functionally synergize to promote axon growth in CNS neurons |
| Q35075729 | KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases |
| Q47635368 | Ketamine suppresses hypoxia-induced inflammatory responses in the late-gestation ovine fetal kidney cortex |
| Q31153200 | Key Genes in Stomach Adenocarcinoma Identified via Network Analysis of RNA-Seq Data |
| Q52641460 | Key genes and regulatory networks involved in the initiation, progression and invasion of colorectal cancer. |
| Q38475190 | Key genes associated with osteoporosis revealed by genome wide gene expression analysis |
| Q95261606 | Key genes of renal tubular necrosis: a bioinformatics analysis |
| Q93009426 | Key genes with prognostic values in suppression of osteosarcoma metastasis using comprehensive analysis |
| Q35145403 | Kinetochore genes are required to fully activate secretory pathway expansion in S. cerevisiae under induced ER stress |
| Q58726316 | Knock-down of AHCY and depletion of adenosine induces DNA damage and cell cycle arrest |
| Q40080487 | Knowledge environments representing molecular entities for the virtual physiological human |
| Q36449056 | LEGO: a novel method for gene set over-representation analysis by incorporating network-based gene weights |
| Q42563914 | Label-free mass spectrometry proteome quantification of human embryonic kidney cells following 24 hours of sialic acid overproduction |
| Q39574791 | Label-free proteomics and systems biology analysis of mycobacterial phagosomes in dendritic cells and macrophages. |
| Q39650780 | Lamina Associated Polypeptide 1 (LAP1) Interactome and Its Functional Features. |
| Q33675663 | Landscape of histone modifications in a sponge reveals the origin of animal cis-regulatory complexity. |
| Q59330124 | Large scale study of anti-sense regulation by differential network analysis |
| Q34275017 | Large-scale functional organization of long-range chromatin interaction networks |
| Q37089501 | Large-scale global identification of protein lysine methylation in vivo |
| Q35895719 | Large-scale phosphotyrosine proteomic profiling of rat renal collecting duct epithelium reveals predominance of proteins involved in cell polarity determination |
| Q37258113 | Large-scale proteomics analysis of the human kinome |
| Q38766033 | Large-scale transcriptome analysis reveals arabidopsis metabolic pathways are frequently influenced by different pathogens |
| Q90281256 | Laser Microdissection-Based Tissue-Specific Transcriptome Analysis Reveals a Novel Regulatory Network of Genes Involved in Heat-Induced Grain Chalk in Rice Endosperm |
| Q34573831 | Laser microdissection and microarray analysis of Tuber melanosporum ectomycorrhizas reveal functional heterogeneity between mantle and Hartig net compartments |
| Q34993896 | Laulimalide and peloruside A inhibit mitosis of Saccharomyces cerevisiae by preventing microtubule depolymerisation-dependent steps in chromosome separation and nuclear positioning |
| Q33359881 | Leaf responses to mild drought stress in natural variants of Arabidopsis |
| Q27015436 | Learning from Co-expression Networks: Possibilities and Challenges |
| Q42009663 | Leveraging input and output structures for joint mapping of epistatic and marginal eQTLs |
| Q57015726 | Lichen Planus |
| Q90065635 | Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism |
| Q34804879 | Link Clustering with Extended Link Similarity and EQ Evaluation Division |
| Q28471842 | Linking gene expression and functional network data in human heart failure |
| Q44823851 | LncRNA expression in the spinal cord modulated by minocycline in a mouse model of spared nerve injury |
| Q42542819 | Locus heterogeneity disease genes encode proteins with high interconnectivity in the human protein interaction network |
| Q33363442 | Low Temperature Affects Stem Cell Maintenance in Brassica oleracea Seedlings |
| Q35119857 | Lsd1 restricts the number of germline stem cells by regulating multiple targets in escort cells |
| Q35737352 | Lymphocyte Invasion in IC10/Basal-Like Breast Tumors Is Associated with Wild-Type TP53. |
| Q48368439 | Lysine Acetylome Analysis Reveals Photosystem II Manganese-stabilizing Protein Acetylation is Involved in Negative Regulation of Oxygen Evolution in Model Cyanobacterium Synechococcus sp. PCC 7002. |
| Q41824213 | MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays |
| Q34122477 | MIR152, MIR200B, and MIR338, human positional and functional neuroblastoma candidates, are involved in neuroblast differentiation and apoptosis |
| Q33396615 | MMP-9 sheds the beta2 integrin subunit (CD18) from macrophages |
| Q97418793 | MMiRNA-Viewer2, a bioinformatics tool for visualizing functional annotation for MiRNA and MRNA pairs in a network |
| Q52332881 | MTGO: PPI Network Analysis Via Topological and Functional Module Identification. |
| Q52147259 | MTHFSD and DDX58 are novel RNA-binding proteins abnormally regulated in amyotrophic lateral sclerosis. |
| Q100525965 | Machine learning approach to integrated endometrial transcriptomic datasets reveals biomarkers predicting uterine receptivity in cattle at seven days after estrous |
| Q44609278 | Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis. |
| Q63976985 | Macrophage Phosphoproteome Analysis Reveals MINCLE-dependent and -independent Mycobacterial Cord Factor Signaling |
| Q34999526 | Major transcriptome reprogramming underlies floral mimicry induced by the rust fungus Puccinia monoica in Boechera stricta |
| Q57729976 | Making a Better Home: Modulation of Plant Defensive Response by Mites |
| Q97640626 | Mammary tissue transcriptomic analysis for construction of integrated regulatory networks involved in lactogenesis of Ovis aries |
| Q31158906 | Mapping Biological Networks from Quantitative Data-Independent Acquisition Mass Spectrometry: Data to Knowledge Pipelines. |
| Q33267908 | Mapping determinants of gene expression plasticity by genetical genomics in C. elegans |
| Q36446259 | Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells |
| Q89527075 | Mapping of quantitative trait loci for traits linked to fusarium head blight in barley |
| Q33550023 | Mapping plant interactomes using literature curated and predicted protein-protein interaction data sets |
| Q28468412 | Mapping the Interactome of a Major Mammalian Endoplasmic Reticulum Heat Shock Protein 90 |
| Q37198598 | Mapping the human protein interactome. |
| Q37155916 | Mass spectrometric and computational analysis of cytokine-induced alterations in the astrocyte secretome |
| Q38393672 | Mass spectrometry analysis of adipose-derived stem cells reveals a significant effect of hypoxia on pathways regulating extracellular matrix. |
| Q35129397 | MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis |
| Q34220063 | Measuring the physical cohesiveness of proteins using physical interaction enrichment. |
| Q92860950 | Mechanism of adrenergic CaV1.2 stimulation revealed by proximity proteomics |
| Q89535737 | Mechanism of tanshinones and phenolic acids from Danshen in the treatment of coronary heart disease based on co-expression network |
| Q34001565 | Mechanisms for the adverse effects of late gestational increases in maternal cortisol on the heart revealed by transcriptomic analyses of the fetal septum |
| Q48326258 | Mechanisms of Mendelian dominance. |
| Q34684856 | Mechanisms of intron loss and gain in the fission yeast Schizosaccharomyces. |
| Q34744495 | Medullospheres from DAOY, UW228 and ONS-76 cells: increased stem cell population and proteomic modifications |
| Q34042137 | Medusa: A tool for exploring and clustering biological networks |
| Q36353820 | Membrane-enriched proteome changes and prion protein expression during neural differentiation and in neuroblastoma cells. |
| Q34558058 | Mendelian and non-Mendelian regulation of gene expression in maize |
| Q42330040 | MerR and ChrR mediate blue light induced photo-oxidative stress response at the transcriptional level in Vibrio cholerae |
| Q38516977 | Merging microarray cell synchronization experiments through curve alignment |
| Q30496756 | MetNetGE: interactive views of biological networks and ontologies |
| Q36171936 | Meta-analysis of Genome-Wide Chromatin Data. |
| Q33395836 | Meta-analysis of expression signatures of muscle atrophy: gene interaction networks in early and late stages |
| Q47663049 | Meta-analysis of transcriptomic datasets identifies genes enriched in the mammalian circadian pacemaker. |
| Q55005450 | Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs. |
| Q39941850 | Metabolic and transcriptional response of central metabolism affected by root endophytic fungus Piriformospora indica under salinity in barley. |
| Q45959476 | Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis. |
| Q91787656 | Metabolomic and transcriptomic profiling reveals the alteration of energy metabolism in oyster larvae during initial shell formation and under experimental ocean acidification |
| Q39267192 | Metabolomic, transcriptional, hormonal, and signaling cross-talk in superroot2. |
| Q95322476 | Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources |
| Q35668455 | Metatranscriptome Analysis of Fig Flowers Provides Insights into Potential Mechanisms for Mutualism Stability and Gall Induction |
| Q91329858 | Metatranscriptomic Analysis of Multiple Environmental Stresses Identifies RAP2.4 Gene Associated with Arabidopsis Immunity to Botrytis cinerea |
| Q37688194 | Metformin increases PDH and suppresses HIF-1α under hypoxic conditions and induces cell death in oral squamous cell carcinoma |
| Q34242024 | Methods for visual mining of genomic and proteomic data atlases |
| Q43729457 | Methylcrotonyl-CoA Carboxylase Regulates Triacylglycerol Accumulation in the Model Diatom Phaeodactylum tricornutum |
| Q93089803 | MiR-30e-5p and MiR-15a-5p Expressions in Plasma and Urine of Type 1 Diabetic Patients With Diabetic Kidney Disease |
| Q36108482 | Mice heterozygous for CREB binding protein are hypersensitive to γ-radiation and invariably develop myelodysplastic/myeloproliferative neoplasm |
| Q36231493 | MicroRNA and Transcription Factor Gene Regulatory Network Analysis Reveals Key Regulatory Elements Associated with Prostate Cancer Progression |
| Q50533348 | MicroRNA and Transcriptomic Profiling Showed miRNA-Dependent Impairment of Systemic Regulation and Synthesis of Biomolecules in Rag2 KO Mice. |
| Q53435007 | MicroRNA expression in BRAF-mutated and wild-type metastatic melanoma and its correlation with response duration to BRAF inhibitors. |
| Q35010459 | MicroRNA expression profile in human macrophages in response to Leishmania major infection |
| Q40444262 | MicroRNA expression signatures in lungs of mice infected with Mycobacterium tuberculosis |
| Q33943865 | MicroRNA genes preferentially expressed in dendritic cells contain sites for conserved transcription factor binding motifs in their promoters. |
| Q39820130 | MicroRNA-125b promotes neuronal differentiation in human cells by repressing multiple targets |
| Q46236135 | MicroRNA-23a promotes pancreatic cancer metastasis by targeting epithelial splicing regulator protein 1. |
| Q30301103 | MicroRNA408 is critical for the HY5-SPL7 gene network that mediates the coordinated response to light and copper |
| Q36698610 | MicroRNAs and their putative targets in Brassica napus seed maturation |
| Q48509155 | Microarray Analysis to Monitor Bacterial Cell Wall Homeostasis. |
| Q91584085 | Microarray Gene Expression Dataset Re-analysis Reveals Variability in Influenza Infection and Vaccination |
| Q31034882 | Microarray analysis of gene expression: considerations in data mining and statistical treatment |
| Q47749757 | Microarray and bioinformatics analyses of gene expression profiles in BALB/c murine macrophage polarization |
| Q36089757 | Microarray based analysis of gene regulation by microRNA in intervertebral disc degeneration |
| Q33899037 | Microbial-Host Co-metabolites Are Prodromal Markers Predicting Phenotypic Heterogeneity in Behavior, Obesity, and Impaired Glucose Tolerance |
| Q28750201 | Microvesicles derived from adult human bone marrow and tissue specific mesenchymal stem cells shuttle selected pattern of miRNAs |
| Q34297457 | Mineralocorticoid effects in the late gestation ovine fetal lung |
| Q53394237 | Mistargeted mitochondrial proteins activate a proteostatic response in the cytosol. |
| Q89928258 | Mitigation of Cd toxicity by Mn in young plants of cacao, evaluated by the proteomic profiles of leaves and roots |
| Q35906493 | Modular organization in the reductive evolution of protein-protein interaction networks |
| Q46246507 | Modulation of Immune Signaling and Metabolism Highlights Host and Fungal Transcriptional Responses in Mouse Models of Invasive Pulmonary Aspergillosis |
| Q28727590 | Modulation of Lactobacillus plantarum gastrointestinal robustness by fermentation conditions enables identification of bacterial robustness markers |
| Q37727621 | Modulation of gene expression regulated by the transcription factor NF-κB/RelA |
| Q35112140 | Modulation of neuronal proteome profile in response to Japanese encephalitis virus infection |
| Q36677024 | Module cover - a new approach to genotype-phenotype studies. |
| Q33564117 | Module network inference from a cancer gene expression data set identifies microRNA regulated modules |
| Q34530682 | Module-based subnetwork alignments reveal novel transcriptional regulators in malaria parasite Plasmodium falciparum |
| Q38435630 | Molecular Evidence for Differential Long-term Outcomes of Early Life Severe Acute Malnutrition. |
| Q92255554 | Molecular Signature of Subtypes of Non-Small-Cell Lung Cancer by Large-Scale Transcriptional Profiling: Identification of Key Modules and Genes by Weighted Gene Co-Expression Network Analysis (WGCNA) |
| Q41880162 | Molecular and cellular features of murine craniofacial and trunk neural crest cells as stem cell-like cells. |
| Q38447025 | Molecular and physiological responses to titanium dioxide and cerium oxide nanoparticles in Arabidopsis |
| Q35529923 | Molecular association of pathogenetic contributors to pre-eclampsia (pre-eclampsia associome). |
| Q42226762 | Molecular characterization of propolis-induced cell death in Saccharomyces cerevisiae. |
| Q38495290 | Molecular evolutionary and population genomic analysis of the nine-spined stickleback using a modified restriction-site-associated DNA tag approach |
| Q98613231 | Molecular memory of Flavescence dorée phytoplasma in recovering grapevines |
| Q39277710 | Molecular signatures in Arabidopsis thaliana in response to insect attack and bacterial infection. |
| Q41476132 | Monitoring storage induced changes in the platelet proteome employing label free quantitative mass spectrometry. |
| Q91703943 | Morpho-physiological integrators, transcriptome and coexpression network analyses signify the novel molecular signatures associated with axillary bud in chrysanthemum |
| Q38429442 | Mortality and transcriptional effects of inorganic mercury in the marine copepod Calanus finmarchicus |
| Q28386912 | Mosaic epigenetic dysregulation of ectodermal cells in autism spectrum disorder |
| Q57464724 | Mrp1 is involved in lipid presentation and iNKT cell activation by Streptococcus pneumoniae |
| Q64262874 | Multi-Phenotype Association Decomposition: Unraveling Complex Gene-Phenotype Relationships |
| Q92430842 | Multi-omics Analyses Reveal Synergistic Carbohydrate Metabolism in Streptococcus mutans-Candida albicans Mixed-Species Biofilms |
| Q96431856 | Multidimensional gene regulatory landscape of a bacterial pathogen in plants |
| Q31018853 | Multilevel functional genomics data integration as a tool for understanding physiology: a network biology perspective |
| Q33857304 | Multilevel support vector regression analysis to identify condition-specific regulatory networks |
| Q64100328 | Multiomics analysis profile acute liver injury module clusters to compare the therapeutic efficacy of bifendate and muaddil sapra |
| Q38626036 | Multiple-trait genomewide mapping and gene network analysis for scrotal circumference growth curves in Brahman cattle |
| Q98653442 | Multiplexed Proximity Biotinylation Coupled to Mass Spectrometry for Defining Integrin Adhesion Complexes |
| Q33808133 | Multiplexed Spliced-Leader Sequencing: A high-throughput, selective method for RNA-seq in Trypanosomatids |
| Q34790185 | Multiscale modeling of the causal functional roles of nsSNPs in a genome-wide association study: application to hypoxia |
| Q38495388 | Murine colon proteome and characterization of the protein pathways. |
| Q44563021 | Myocardial gene expression of matched hibernating and control tissue from patients with ischemic left ventricular dysfunction |
| Q38724052 | Myofibrillar Z-discs Are a Protein Phosphorylation Hot Spot with Protein Kinase C (PKCα) Modulating Protein Dynamics |
| Q34585592 | N-glycoprotein SRMAtlas: a resource of mass spectrometric assays for N-glycosites enabling consistent and multiplexed protein quantification for clinical applications |
| Q31119178 | NOA: a cytoscape plugin for network ontology analysis |
| Q38502454 | NOA: a novel Network Ontology Analysis method |
| Q50531256 | NORE1/SAUL1 integrates temperature-dependent defense programs involving SGT1b and PAD4 pathways and leaf senescence in Arabidopsis. |
| Q37458826 | Nasonia vitripennis venom causes targeted gene expression changes in its fly host |
| Q33798907 | Natural taurine promotes apoptosis of human hepatic stellate cells in proteomics analysis |
| Q57817834 | Natural variation for gene expression responses to abiotic stress in maize |
| Q33780993 | Ndfip1 restricts mTORC1 signalling and glycolysis in regulatory T cells to prevent autoinflammatory disease |
| Q92557865 | Neocarzilin A Is a Potent Inhibitor of Cancer Cell Motility Targeting VAT-1 Controlled Pathways |
| Q61806581 | Network Analysis Reveals TNF as a Major Hub of Reactive Inflammation Following Spinal Cord Injury |
| Q46245433 | Network analysis of pseudogene-gene relationships: from pseudogene evolution to their functional potentials |
| Q37143014 | Network analysis reveals potential markers for pediatric adrenocortical carcinoma |
| Q60049715 | Network assessment of demethylation treatment in melanoma: Differential transcriptome-methylome and antigen profile signatures |
| Q36490625 | Network biology approach for identifying key regulatory genes by expression based study of breast cancer |
| Q40175868 | Network characteristic analysis of ADR-related proteins and identification of ADR-ADR associations. |
| Q33533378 | Network inference and network response identification: moving genome-scale data to the next level of biological discovery |
| Q28751567 | Network integration and graph analysis in mammalian molecular systems biology |
| Q92633847 | Network of Interactions between ZIKA Virus Non-Structural Proteins and Human Host Proteins |
| Q89553908 | Network pharmacology-based study on the mechanism of Yiganling capsule in hepatitis B treatment |
| Q35118812 | Network representations of immune system complexity |
| Q38450989 | Network stratification analysis for identifying function-specific network layers |
| Q28584257 | Network-Based Approach to Identify Potential Targets and Drugs that Promote Neuroprotection and Neurorepair in Acute Ischemic Stroke |
| Q36448921 | Network-Based Comparative Analysis of Arabidopsis Immune Responses to Golovinomyces orontii and Botrytis cinerea Infections. |
| Q30657033 | Network-based analysis of genome wide association data provides novel candidate genes for lipid and lipoprotein traits |
| Q61799026 | Network-based integrated analysis of omics data reveal novel players of TGF-β1-induced EMT in human peritoneal mesothelial cells |
| Q30541512 | Network2Canvas: network visualization on a canvas with enrichment analysis |
| Q42724540 | NetworkAnalyst--integrative approaches for protein-protein interaction network analysis and visual exploration |
| Q28508622 | Neurolysin knockout mice generation and initial phenotype characterization |
| Q57816640 | Neuronal heterogeneity and stereotyped connectivity in the auditory afferent system |
| Q35125807 | New genes that extend Caenorhabditis elegans' lifespan in response to reproductive signals |
| Q89980474 | New genome assemblies reveal patterns of domestication and adaptation across Brettanomyces (Dekkera) species |
| Q34040787 | New resources for functional analysis of omics data for the genus Aspergillus |
| Q90352219 | Niche-Specific Factors Dynamically Regulate Sebaceous Gland Stem Cells in the Skin |
| Q46215561 | Nitric oxide modulates ozone-induced cell death, hormone biosynthesis and gene expression in Arabidopsis thaliana |
| Q30351997 | Nodes having a major influence to break cooperation define a novel centrality measure: game centrality. |
| Q39062958 | Non-Coding RNAs in Lung Cancer: Contribution of Bioinformatics Analysis to the Development of Non-Invasive Diagnostic Tools |
| Q47692589 | Non-branched β-1,3-glucan oligosaccharides trigger immune responses in Arabidopsis |
| Q37621383 | Non-interacting proteins may resemble interacting proteins: prevalence and implications. |
| Q33465453 | Non-thermal plasma treatment altered gene expression profiling in non-small-cell lung cancer A549 cells |
| Q36344535 | Nonsense-mediated mRNA decay in Tetrahymena is EJC independent and requires a protozoa-specific nuclease |
| Q40353337 | Normal human cell proteins that interact with the adenovirus type 5 E1B 55kDa protein |
| Q38389725 | Normal human mitral valve proteome: A preliminary investigation by gel-based and gel-free proteomic approaches |
| Q90481380 | Novel candidate biomarkers of origin recognition complex 1, 5 and 6 for survival surveillance in patients with hepatocellular carcinoma |
| Q28535430 | Novel factors in the pathogenesis of psoriasis and potential drug candidates are found with systems biology approach |
| Q51416243 | Novel functions of the Arabidopsis transcription factor TCP5 in petal development and ethylene biosynthesis. |
| Q30385012 | Novel insights into human respiratory syncytial virus-host factor interactions through integrated proteomics and transcriptomics analysis |
| Q34629181 | Novel positive regulatory role for the SPL6 transcription factor in the N TIR-NB-LRR receptor-mediated plant innate immunity. |
| Q52378100 | Novel proteins from proteomic analysis of the trunk disease fungus Lasiodiplodia theobromae (Botryosphaeriaceae). |
| Q37332408 | Novel regulators of Fgf23 expression and mineralization in Hyp bone |
| Q91811440 | Novel transcriptional responses to heat revealed by turning up the heat at night |
| Q35965053 | Nuclear Localization of the Autism Candidate Gene Neurobeachin and Functional Interaction with the NOTCH1 Intracellular Domain Indicate a Role in Regulating Transcription. |
| Q34651070 | Nuclear cytoplasmic trafficking of proteins is a major response of human fibroblasts to oxidative stress |
| Q35228115 | Nuclear effects of G-protein receptor kinase 5 on histone deacetylase 5-regulated gene transcription in heart failure |
| Q92091735 | Nuclear factor erythroid 2 - related factor 2 and its relationship with cellular response in nickel exposure: a systems biology analysis |
| Q41919316 | Nuclear respiratory factor 2 induces SIRT3 expression. |
| Q54940355 | OLIGOCELLULA1/HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES15 Promotes Cell Proliferation With HISTONE DEACETYLASE9 and POWERDRESS During Leaf Development in Arabidopsis thaliana. |
| Q34285920 | OLSVis: an animated, interactive visual browser for bio-ontologies |
| Q33787367 | ONTO-ToolKit: enabling bio-ontology engineering via Galaxy |
| Q88727915 | Ocimum basilicum miRNOME revisited: A cross kingdom approach |
| Q37477767 | Old age and the associated impairment of bones' adaptation to loading are associated with transcriptomic changes in cellular metabolism, cell-matrix interactions and the cell cycle. |
| Q33954273 | OntoVisT: A general purpose Ontological Visualization Tool |
| Q57900903 | Ontogenetic Changes in the Bacterial Symbiont Community of the Tropical Demosponge Amphimedon queenslandica: Metamorphosis Is a New Beginning |
| Q92733308 | Open Data for Differential Network Analysis in Glioma |
| Q27687756 | Open source libraries and frameworks for biological data visualisation: a guide for developers |
| Q34579722 | Optimization of transcription factor binding map accuracy utilizing knockout-mouse models |
| Q45172614 | Organellar proteome analyses of ricin toxin-treated HeLa cells |
| Q41145091 | Outlier detection at the transcriptome-proteome interface. |
| Q35075270 | Over-expression of hNGF in adult human olfactory bulb neural stem cells promotes cell growth and oligodendrocytic differentiation. |
| Q37728965 | Overexpression of Transforming Acidic Coiled Coil‑Containing Protein 3 Reflects Malignant Characteristics and Poor Prognosis of Glioma |
| Q38697653 | Overexpression of mir-183 and mir-494 promotes proliferation and migration in human breast cancer cell lines |
| Q60044389 | Ozone-induced inhibition of kiwifruit ripening is amplified by 1-methylcyclopropene and reversed by exogenous ethylene |
| Q33611393 | PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms. |
| Q50057961 | PD-1 axis expression in musculoskeletal tumors and antitumor effect of nivolumab in osteosarcoma model of humanized mouse. |
| Q90261208 | PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding |
| Q39921326 | PEIMAN 1.0: Post-translational modification Enrichment, Integration and Matching ANalysis. |
| Q93340544 | PERPETUAL FLOWERING2 coordinates the vernalization response and perennial flowering in Arabis alpina |
| Q24338563 | PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progression |
| Q30659607 | POTION: an end-to-end pipeline for positive Darwinian selection detection in genome-scale data through phylogenetic comparison of protein-coding genes |
| Q27340116 | PPARβ interprets a chromatin signature of pluripotency to promote embryonic differentiation at gastrulation |
| Q91865031 | PRPF40A as a potential diagnostic and prognostic marker is upregulated in pancreatic cancer tissues and cell lines: an integrated bioinformatics data analysis |
| Q37074418 | PTP1B controls non-mitochondrial oxygen consumption by regulating RNF213 to promote tumour survival during hypoxia |
| Q34433518 | PTPepsilon has a critical role in signaling transduction pathways and phosphoprotein network topology in red cells |
| Q92998656 | PUCHI regulates very long chain fatty acid biosynthesis during lateral root and callus formation |
| Q37701684 | Pan-organ transcriptome variation across 21 cancer types |
| Q37733923 | Parallel analysis of Arabidopsis circadian clock mutants reveals different scales of transcriptome and proteome regulation |
| Q53486761 | Parent-of-origin effects on gene expression and DNA methylation in the maize endosperm |
| Q33887660 | Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps |
| Q37183962 | Pathway and network-based analysis of genome-wide association studies in multiple sclerosis |
| Q63484960 | Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap |
| Q42651561 | Perceiving molecular evolution processes in Escherichia coli by comprehensive metabolite and gene expression profiling |
| Q50492494 | Perception of low red:far-red ratio compromises both salicylic acid- and jasmonic acid-dependent pathogen defences in Arabidopsis. |
| Q38445947 | Permanent proteins in the urine of healthy humans during the Mars-500 experiment. |
| Q36020255 | Peroxisomal L-bifunctional enzyme (Ehhadh) is essential for the production of medium-chain dicarboxylic acids |
| Q35195408 | Personal genomes, quantitative dynamic omics and personalized medicine |
| Q29614800 | Personal omics profiling reveals dynamic molecular and medical phenotypes |
| Q38437083 | Personalized Identification of Differentially Expressed Modules in Osteosarcoma. |
| Q38616670 | Perturbation of Auxin Homeostasis and Signaling by PINOID Overexpression Induces Stress Responses in Arabidopsis |
| Q34341628 | Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor |
| Q38099521 | PheNetic: network-based interpretation of unstructured gene lists in E. coli |
| Q28535241 | PhenoTimer: software for the visual mapping of time-resolved phenotypic landscapes |
| Q60919600 | Phenotypic, Hormonal, and Genomic Variation Among Clones With Different Cluster Compactness and Reproductive Performance |
| Q34092161 | Phospholipid Transfer Protein in Human Plasma Associates with Proteins Linked to Immunity and Inflammation |
| Q28551004 | Phosphoproteome Analysis of Invasion and Metastasis-Related Factors in Pancreatic Cancer Cells |
| Q27333727 | Phosphoproteomic analyses reveal signaling pathways that facilitate lytic gammaherpesvirus replication |
| Q35033565 | Phosphoproteomic analysis of protein phosphorylation networks in Tetrahymena thermophila, a model single-celled organism. |
| Q46088539 | Photoactivation and inactivation of Arabidopsis cryptochrome 2. |
| Q37202106 | Photosynthate Regulation of the Root System Architecture Mediated by the Heterotrimeric G Protein Complex in Arabidopsis. |
| Q89637177 | Physicochemical characterization of Pseudomonas stutzeri UFV5 and analysis of its transcriptome under heterotrophic nitrification/aerobic denitrification pathway induction condition |
| Q37462180 | Phytochrome-interacting factors have both shared and distinct biological roles |
| Q37183164 | Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors |
| Q33806851 | PiNGO: a Cytoscape plugin to find candidate genes in biological networks. |
| Q58093950 | Pilot Production of Mesenchymal Stem/Stromal Freeze-Dried Secretome for Cell-Free Regenerative Nanomedicine: A Validated GMP-Compliant Process |
| Q92812919 | Placenta-Specific Genes, Their Regulation During Villous Trophoblast Differentiation and Dysregulation in Preterm Preeclampsia |
| Q33348473 | Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation |
| Q98735696 | Plant Immune System Activation Upon Citrus Leprosis Virus C Infection Is Mimicked by the Ectopic Expression of the P61 Viral Protein |
| Q36221631 | Plant neighbor detection through touching leaf tips precedes phytochrome signals |
| Q46004074 | Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks within the Arabidopsis/Botrytis Pathosystem. |
| Q35775663 | Plastid Proteomic Analysis in Tomato Fruit Development |
| Q35779407 | Pleiotropic drug-resistance attenuated genomic library improves elucidation of drug mechanisms |
| Q28652203 | Pogo-like transposases have been repeatedly domesticated into CENP-B-related proteins |
| Q33851474 | Polycomb repressive complex 2 controls the embryo-to-seedling phase transition. |
| Q64261909 | Polypropylene mesh implantation for hernia repair causes myeloid cell-driven persistent inflammation |
| Q38756860 | Population Genomics of Paramecium Species. |
| Q33672145 | Populus trichocarpa encodes small, effector-like secreted proteins that are highly induced during mutualistic symbiosis. |
| Q31104325 | Porcine tissue-specific regulatory networks derived from meta-analysis of the transcriptome. |
| Q55258984 | Potential mechanism and drug candidates for sepsis-induced acute lung injury. |
| Q90746125 | Potential therapeutic targets of the nuclear division cycle 80 (NDC80) complexes genes in lung adenocarcinoma |
| Q31160218 | Powerful differential expression analysis incorporating network topology for next-generation sequencing data. |
| Q36848271 | Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology |
| Q26247786 | Predicted protein interactions of IFITMs which inhibit Zika virus infection |
| Q35257733 | Predicted protein-protein interactions in the moss Physcomitrella patens: a new bioinformatic resource |
| Q35819069 | Predicting Abdominal Aortic Aneurysm Target Genes by Level-2 Protein-Protein Interaction |
| Q34556000 | Predicting PDZ domain mediated protein interactions from structure |
| Q34326245 | Predicting candidate genes based on combined network topological features: a case study in coronary artery disease |
| Q52350549 | Predicting protein complexes using a supervised learning method combined with local structural information. |
| Q33686676 | Prediction of a gene regulatory network linked to prostate cancer from gene expression, microRNA and clinical data |
| Q48226662 | Prediction of novel target genes and pathways involved in bevacizumab-resistant colorectal cancer. |
| Q35101921 | Prediction of protein interaction types based on sequence and network features |
| Q35875313 | Prediction of tissue-specific effects of gene knockout on apoptosis in different anatomical structures of human brain. |
| Q37233506 | Primary biliary cirrhosis is associated with altered hepatic microRNA expression |
| Q91866698 | Pro-opiomelanocortin (POMC) neuron translatome signatures underlying obesogenic gestational malprogramming in mice |
| Q28756079 | ProbCD: enrichment analysis accounting for categorization uncertainty |
| Q92088840 | Prognostic significance and molecular mechanisms of adenosine triphosphate-binding cassette subfamily C members in gastric cancer |
| Q34480079 | Prognostic transcriptional association networks: a new supervised approach based on regression trees |
| Q93141448 | Prognostic value of Kinesin-4 family genes mRNA expression in early-stage pancreatic ductal adenocarcinoma patients after pancreaticoduodenectomy |
| Q50528599 | Programming of Plant Leaf Senescence with Temporal and Inter-Organellar Coordination of Transcriptome in Arabidopsis. |
| Q33600412 | Prolonged Absence of Mechanoluminal Stimulation in Human Intestine Alters the Transcriptome and Intestinal Stem Cell Niche |
| Q64100274 | Prolonged Bat Call Exposure Induces a Broad Transcriptional Response in the Male Fall Armyworm (; Lepidoptera: Noctuidae) Brain |
| Q88043905 | Promyelocytic Leukemia Protein (PML) Requirement for Interferon-induced Global Cellular SUMOylation |
| Q37390549 | Proposal for a new therapy for drug-resistant malaria using Plasmodium synthetic lethality inference |
| Q34173524 | Protease-associated cellular networks in malaria parasite Plasmodium falciparum |
| Q37396016 | Proteasome inhibitor-adapted myeloma cells are largely independent from proteasome activity and show complex proteomic changes, in particular in redox and energy metabolism |
| Q52644178 | Protein S-Nitrosylation Controls Glycogen Synthase Kinase 3β Function Independent of its Phosphorylation State. |
| Q49866097 | Protein complex finding and ranking: An application to Alzheimer's disease. |
| Q42362578 | Protein complex prediction via dense subgraphs and false positive analysis |
| Q38453597 | Protein disorder reduced in Saccharomyces cerevisiae to survive heat shock |
| Q42323666 | Protein disulfide isomerase is required for platelet-derived growth factor-induced vascular smooth muscle cell migration, Nox1 NADPH oxidase expression, and RhoGTPase activation. |
| Q31108958 | Protein interaction network of Arabidopsis thaliana female gametophyte development identifies novel proteins and relations |
| Q38670275 | Protein kinase G signaling in cardiac pathophysiology: Impact of proteomics on clinical trials |
| Q64926874 | Protein quality control in the nucleolus safeguards recovery of epigenetic regulators after heat shock. |
| Q37596896 | Protein signatures of oxidative stress response in a patient specific cell line model for autism |
| Q36471316 | Protein turnover during in vitro tissue engineering |
| Q89224249 | Protein-Protein Interaction Network Analysis of Salivary Proteomic Data in Oral Cancer Cases |
| Q45682609 | Protein-protein interaction network analysis in chronic obstructive pulmonary disease |
| Q60950318 | Proteome Investigation of Rat Lungs subjected to Ex Vivo Perfusion (EVLP) |
| Q34276972 | Proteome sampling by the HLA class I antigen processing pathway |
| Q30990200 | Proteome scanning to predict PDZ domain interactions using support vector machines |
| Q55512626 | Proteome-wide analysis of human motif-domain interactions mapped on influenza a virus. |
| Q37014677 | Proteome-wide identification of poly(ADP-ribose) binding proteins and poly(ADP-ribose)-associated protein complexes |
| Q30390999 | Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana |
| Q35966045 | Proteomic Profiling of Mouse Liver following Acute Toxoplasma gondii Infection |
| Q36392782 | Proteomic analysis of a decellularized human vocal fold mucosa scaffold using 2D electrophoresis and high-resolution mass spectrometry |
| Q24295851 | Proteomic analysis of cerebrospinal fluid extracellular vesicles: a comprehensive dataset |
| Q27315900 | Proteomic analysis of detergent resistant membrane domains during early interaction of macrophages with rough and smooth Brucella melitensis |
| Q41952792 | Proteomic analysis of extracellular vesicles from medullospheres reveals a role for iron in the cancer progression of medulloblastoma |
| Q38437443 | Proteomic analysis of human substantia nigra identifies novel candidates involved in Parkinson's disease pathogenesis |
| Q36278956 | Proteomic analysis of naturally-sourced biological scaffolds |
| Q33747370 | Proteomic analysis of peritoneal fluid of patients treated by peritoneal dialysis: effect of glucose concentration. |
| Q38474129 | Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy |
| Q35610639 | Proteomic analysis of virus-host interactions in an infectious context using recombinant viruses |
| Q35864904 | Proteomic and bioinformatics analyses of mouse liver microsomes. |
| Q38937054 | Proteomic characterization of the internalization of Opisthorchis viverrini excretory/secretory products in human cells |
| Q48112435 | Proteomic identification of ERP29 as a key chemoresistant factor activated by the aggregating p53 mutant Arg282Trp |
| Q34146759 | Proteomic plasma membrane profiling reveals an essential role for gp96 in the cell surface expression of LDLR family members, including the LDL receptor and LRP6. |
| Q33381649 | Proteomic profiling of Plasmodium sporozoite maturation identifies new proteins essential for parasite development and infectivity |
| Q33616578 | Proteomics analysis of the peritoneal dialysate effluent reveals the presence of calcium-regulation proteins and acute inflammatory response |
| Q36375181 | Proteomics and bioinformatics analysis of mouse hypothalamic neurogenesis with or without EPHX2 gene deletion |
| Q47096219 | Proteomics and metabolomics analysis of hepatic mitochondrial metabolism in alcohol-preferring and non-preferring rats |
| Q94680955 | Proteomics of SARS-CoV-2-infected host cells reveals therapy targets |
| Q38629150 | Proteomics of cell-cell interactions in health and disease. |
| Q36832502 | Proteomics of genetically engineered mouse mammary tumors identifies fatty acid metabolism members as potential predictive markers for cisplatin resistance |
| Q54721073 | Proteomics strategy for quantitative protein interaction profiling in cell extracts. |
| Q36884872 | Proteomics-based methods for discovery, quantification, and validation of protein-protein interactions |
| Q35926212 | Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways. |
| Q41618258 | Quantitative Proteome and Transcriptome Analysis of the Archaeon Thermoplasma acidophilum Cultured under Aerobic and Anaerobic Conditions |
| Q58785430 | Quantitative RNA-seq Analysis Unveils Osmotic and Thermal Adaptation Mechanisms Relevant for Ectoine Production in |
| Q36922808 | Quantitative proteomic analysis of S-nitrosated proteins in diabetic mouse liver with ICAT switch method |
| Q40045780 | Quantitative proteomic analysis of host responses triggered by Mycobacterium tuberculosis infection in human macrophage cells |
| Q28478299 | Quantitative proteomic and interaction network analysis of cisplatin resistance in HeLa cells |
| Q36228488 | Quantitative proteomics profiling of the poly(ADP-ribose)-related response to genotoxic stress |
| Q92146841 | Quantitative proteomics reveals TMOD1-related proteins associated with water balance regulation |
| Q34667720 | Quantitative proteomics reveals a "poised quiescence" cellular state after triggering the DNA replication origin activation checkpoint |
| Q36250869 | Quantitative proteomics reveals novel therapeutic and diagnostic markers in hypertension. |
| Q36661602 | Quantitative proteomics study of the neuroprotective effects of B12 on hydrogen peroxide-induced apoptosis in SH-SY5Y cells |
| Q29614817 | REVIGO summarizes and visualizes long lists of gene ontology terms |
| Q41835167 | RISC RNA sequencing for context-specific identification of in vivo microRNA targets |
| Q37368517 | RMaNI: Regulatory Module Network Inference framework |
| Q34401522 | RNA G-Quadruplexes in the model plant species Arabidopsis thaliana: prevalence and possible functional roles |
| Q33580609 | RNA sequencing analysis reveals transcriptomic variations in tobacco (Nicotiana tabacum) leaves affected by climate, soil, and tillage factors |
| Q35082497 | RNA sequencing of the exercise transcriptome in equine athletes |
| Q38462589 | RNA sequencing provides insights into the toxicogenomic response of ZF4 cells to methyl methanesulfonate |
| Q50317836 | RNA-Seq Reveals Extensive Transcriptional Response to Heat Stress in the Stony Coral Galaxea fascicularis. |
| Q36012077 | RNA-Seq analysis identifies key genes associated with haustorial development in the root hemiparasite Santalum album |
| Q28541792 | RNA-Seq and microarrays analyses reveal global differential transcriptomes of Mesorhizobium huakuii 7653R between bacteroids and free-living cells |
| Q33358115 | RNA-seq analysis identifies an intricate regulatory network controlling cluster root development in white lupin |
| Q39404001 | RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae. |
| Q36194368 | RNA-seq based transcriptomic map reveals new insights into mouse salivary gland development and maturation. |
| Q92072660 | RNAseq Analysis of the Response of Arabidopsis thaliana to Fractional Gravity Under Blue-Light Stimulation During Spaceflight |
| Q34990555 | ROCK1 is a potential combinatorial drug target for BRAF mutant melanoma |
| Q90662697 | RORγ is a targetable master regulator of cholesterol biosynthesis in a cancer subtype |
| Q60907471 | Rab1b and ARF5 are novel RNA-binding proteins involved in FMDV IRES-driven RNA localization |
| Q34489676 | Rad9 interacts with Aft1 to facilitate genome surveillance in fragile genomic sites under non-DNA damage-inducing conditions in S. cerevisiae |
| Q42322073 | Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species |
| Q36602375 | Reactive oxygen species regulate leaf pulvinus abscission zone cell separation in response to water-deficit stress in cassava |
| Q94464914 | Recapitulating kidney development in vitro by priming and differentiating mouse embryonic stem cells in monolayers |
| Q35128304 | Receptor-independent protein kinase C alpha (PKCalpha) signaling by calpain-generated free catalytic domains induces HDAC5 nuclear export and regulates cardiac transcription |
| Q28595806 | Reciprocal genomic evolution in the ant-fungus agricultural symbiosis |
| Q46594879 | Recombinant antibody production in Arabidopsis seeds triggers an unfolded protein response |
| Q28817751 | Reconstructing the Backbone of the Saccharomycotina Yeast Phylogeny Using Genome-Scale Data |
| Q38435981 | Reconstructing the genome of the most recent common ancestor of flowering plants |
| Q35040014 | Reconstruction and analysis of human kidney-specific metabolic network based on omics data |
| Q88614051 | Reconstruction and analysis of the aberrant lncRNA-miRNA-mRNA network based on competitive endogenous RNA in CESC |
| Q33398803 | Reconstruction and functional analysis of altered molecular pathways in human atherosclerotic arteries |
| Q36524746 | Refinement in localization and identification of gene regions associated with Crohn disease |
| Q27329450 | Regions of homozygosity in the porcine genome: consequence of demography and the recombination landscape |
| Q37182733 | Regulation of Gene Expression in Shewanella oneidensis MR-1 during Electron Acceptor Limitation and Bacterial Nanowire Formation |
| Q37485587 | Regulation of Secondary Metabolism by the Velvet Complex Is Temperature-Responsive in Aspergillus |
| Q41853230 | Relative quantification of phosphoproteomic changes in grapevine (Vitis vinifera L.) leaves in response to abscisic acid. |
| Q36637700 | Relevance of the Axis Spermidine/eIF5A for Plant Growth and Development. |
| Q34051855 | Removing bias against membrane proteins in interaction networks |
| Q90450687 | Repair mechanism of astrocytes and non-astrocytes in spinal cord injury |
| Q37434155 | Reprogramming mouse fibroblasts into engraftable myeloerythroid and lymphoid progenitors |
| Q36102844 | Reprogramming of Strawberry (Fragaria vesca) Root Transcriptome in Response to Phytophthora cactorum |
| Q37352085 | Research prioritization through prediction of future impact on biomedical science: a position paper on inference-analytics |
| Q36122766 | Reshaping of the maize transcriptome by domestication. |
| Q33549960 | Response network analysis of differential gene expression in human epithelial lung cells during avian influenza infections |
| Q34020428 | Response of Saccharomyces cerevisiae to the stimulation of lipopolysaccharide |
| Q36292002 | Response of microRNAs to cold treatment in the young spikes of common wheat |
| Q33606237 | Response of the mosquito protein interaction network to dengue infection |
| Q36529977 | Revealing new candidate genes for reproductive traits in pigs: combining Bayesian GWAS and functional pathways. |
| Q45955202 | Revealing shared and distinct gene network organization in Arabidopsis immune responses by integrative analysis. |
| Q36057353 | Revealing the anti-tumor effect of artificial miRNA p-27-5p on human breast carcinoma cell line T-47D. |
| Q34770400 | Revealing the hidden relationship by sparse modules in complex networks with a large-scale analysis |
| Q38470355 | Revealing the potential pathogenesis of glioma by utilizing a glioma associated protein-protein interaction network |
| Q28083193 | Reverse enGENEering of Regulatory Networks from Big Data: A Roadmap for Biologists |
| Q35668629 | Rewiring of human lung cell lineage and mitotic networks in lung adenocarcinomas. |
| Q37502046 | Rewiring of jasmonate and phytochrome B signalling uncouples plant growth-defense tradeoffs. |
| Q91970479 | Rhesus Brain Transcriptomic Landscape in an ex vivo Model of the Interaction of Live Borrelia Burgdorferi With Frontal Cortex Tissue Explants |
| Q37224843 | Rheumatoid arthritis with deficiency pattern in traditional chinese medicine shows correlation with cold and hot patterns in gene expression profiles |
| Q22065686 | Rice structural variation: a comparative analysis of structural variation between rice and three of its closest relatives in the genus Oryza |
| Q34426611 | Rif2 promotes a telomere fold-back structure through Rpd3L recruitment in budding yeast |
| Q38708090 | Ripening Transcriptomic Program in Red and White Grapevine Varieties Correlates with Berry Skin Anthocyanin Accumulation |
| Q50065090 | Role of CD133 Molecule in Wnt Response and Renal Repair. |
| Q37532658 | Role of CYB5A in pancreatic cancer prognosis and autophagy modulation |
| Q59192466 | Role of fibronectin in the process of human intestinal cell disruption during E. histolytica infection |
| Q42557829 | Rough set soft computing cancer classification and network: one stone, two birds |
| Q38501548 | RuleGO: a logical rules-based tool for description of gene groups by means of Gene Ontology. |
| Q38811341 | S100-alarmin-induced innate immune programming protects newborn infants from sepsis |
| Q107344282 | SARS-CoV-2 exacerbates proinflammatory responses in myeloid cells through C-type lectin receptors and Tweety family member 2 |
| Q42355854 | SCARECROW-LIKE15 interacts with HISTONE DEACETYLASE19 and is essential for repressing the seed maturation programme |
| Q33349691 | SHORT-ROOT and SCARECROW regulate leaf growth in Arabidopsis by stimulating S-phase progression of the cell cycle |
| Q58763224 | SOX2OT knockdown derived changes in mitotic regulatory gene network of cancer cells |
| Q89743222 | SSIF: Subsumption-based Sub-term Inference Framework to Audit Gene Ontology |
| Q31111111 | STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation |
| Q92388530 | Salt-sensitive transcriptome of isolated kidney distal tubule cells |
| Q34531777 | Schizophrenia interactome with 504 novel protein-protein interactions |
| Q41259615 | Scoring Large-Scale Affinity Purification Mass Spectrometry Datasets with MiST. |
| Q33415261 | Screening a genome-wide S. pombe deletion library identifies novel genes and pathways involved in genome stability maintenance |
| Q92487955 | Screening and Bioinformatics Analysis of IgA Nephropathy Gene Based on GEO Databases |
| Q95265907 | Screening and Identification of Differentially Expressed Genes Expressed among Left and Right Colon Adenocarcinoma |
| Q90705789 | Screening and authentication of molecular markers in malignant glioblastoma based on gene expression profiles |
| Q40049662 | Screening and identification of key biomarkers in hepatocellular carcinoma: Evidence from bioinformatic analysis |
| Q38459934 | Screening feature genes of osteosarcoma with DNA microarray: a bioinformatic analysis |
| Q52320626 | Screening for implicated genes in colorectal cancer using whole‑genome gene expression profiling. |
| Q38438061 | Screening for potential genes associated with bone overgrowth after mid-shaft femur fracture in a rat model |
| Q40950419 | Screening of candidate genes in fibroblasts derived from patients with Dupuytren's contracture using bioinformatics analysis |
| Q37075242 | Screening of osteoprotegerin-related feature genes in osteoporosis and functional analysis with DNA microarray |
| Q34233569 | Searching for cellular partners of hantaviral nonstructural protein NSs: Y2H screening of mouse cDNA library and analysis of cellular interactome |
| Q31154950 | Searching for master regulators of transcription in a human gene expression data set. |
| Q27309157 | Seasonal cues induce phenotypic plasticity of Drosophila suzukii to enhance winter survival |
| Q33952612 | Secretory pathway genes assessed by high-throughput microscopy and synthetic genetic array analysis. |
| Q39308127 | Selective Autophagy of BES1 Mediated by DSK2 Balances Plant Growth and Survival |
| Q38437022 | Semantic particularity measure for functional characterization of gene sets using gene ontology. |
| Q38698037 | Semi-Quantitative Mass Spectrometry in AML Cells Identifies New Non-Genomic Targets of the EZH2 Methyltransferase. |
| Q34310132 | Semi-rolled leaf1 encodes a putative glycosylphosphatidylinositol-anchored protein and modulates rice leaf rolling by regulating the formation of bulliform cells |
| Q37507799 | Separate enrichment analysis of pathways for up- and downregulated genes. |
| Q34257086 | Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes |
| Q33516554 | Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs |
| Q47227900 | Sequential Feature Selection and Inference using Multivariate Random Forests |
| Q92838026 | Serum proteomics study reveals candidate biomarkers for systemic lupus erythematosus |
| Q87686309 | Severe Neonatal Hyperbilirubinemia in Crigler-Najjar Syndrome Model Mice Can Be Reversed With Zinc Protoporphyrin |
| Q37343070 | Sex Change in Clownfish: Molecular Insights from Transcriptome Analysis. |
| Q37524578 | Sex differences in the human peripheral blood transcriptome |
| Q93027904 | Sex-specific changes in the aphid DNA methylation landscape |
| Q36780912 | Sexual Polyploidization in Medicago sativa L.: Impact on the Phenotype, Gene Transcription, and Genome Methylation |
| Q33850424 | Sig2BioPAX: Java tool for converting flat files to BioPAX Level 3 format |
| Q36002679 | Silencing of poly(ADP-ribose) polymerase in plants alters abiotic stress signal transduction |
| Q34301432 | Simultaneous learning of instantaneous and time-delayed genetic interactions using novel information theoretic scoring technique |
| Q36623072 | Simultaneous reconstruction of multiple signaling pathways via the prize-collecting steiner forest problem |
| Q38810987 | Single-Copy Genes as Molecular Markers for Phylogenomic Studies in Seed Plants |
| Q88645537 | Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulations |
| Q64089553 | Single-cell transcriptome analysis of Physcomitrella leaf cells during reprogramming using microcapillary manipulation |
| Q91328358 | Single-cell transcriptome sequencing of rumen ciliates provides insight into their molecular adaptations to the anaerobic and carbohydrate-rich rumen microenvironment |
| Q33883063 | Site-specific phosphorylation dynamics of the nuclear proteome during the DNA damage response |
| Q86426814 | Skeletal muscle proteomic signature and metabolic impairment in pulmonary hypertension |
| Q40354085 | Skeletal muscle transcriptional profiles in two Italian beef breeds, Chianina and Maremmana, reveal breed specific variation |
| Q35956764 | Small RNA and PARE sequencing in flower bud reveal the involvement of sRNAs in endodormancy release of Japanese pear (Pyrus pyrifolia 'Kosui'). |
| Q37618005 | Small RNA interactome of pathogenic E. coli revealed through crosslinking of RNase E. |
| Q92431995 | Small RNA profiling in Pinus pinaster reveals the transcriptome of developing seeds and highlights differences between zygotic and somatic embryos |
| Q30417547 | Social odors conveying dominance and reproductive information induce rapid physiological and neuromolecular changes in a cichlid fish |
| Q41328427 | SoxNeuro orchestrates central nervous system specification and differentiation in Drosophila and is only partially redundant with Dichaete |
| Q45150403 | Spatial and temporal transcriptomic analysis of the Arabidopsis thaliana-Botrytis cinerea interaction |
| Q35837072 | Spatial dissection of the Arabidopsis thaliana transcriptional response to downy mildew using Fluorescence Activated Cell Sorting |
| Q89932299 | Spatiotemporal Proteomics Reveals the Molecular Consequences of Hormone Treatment in a Mouse Model of Lower Urinary Tract Dysfunction |
| Q91627016 | Specific chromatin changes mark lateral organ founder cells in the Arabidopsis inflorescence meristem |
| Q38725595 | Sperm proteomics: potential impact on male infertility treatment. |
| Q34600785 | Spermidine and resveratrol induce autophagy by distinct pathways converging on the acetylproteome |
| Q49789426 | Spina bifida-predisposing heterozygous mutations in Planar Cell Polarity genes and Zic2 reduce bone mass in young mice. |
| Q35764178 | Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining |
| Q37416139 | Spleen-Dependent Immune Protection Elicited by CpG Adjuvanted Reticulocyte-Derived Exosomes from Malaria Infection Is Associated with Changes in T cell Subsets' Distribution |
| Q36296843 | Splicing-related genes are alternatively spliced upon changes in ambient temperatures in plants. |
| Q36243548 | Stable Isotope Labeling with Amino Acids (SILAC)-Based Proteomics of Primary Human Kidney Cells Reveals a Novel Link between Male Sex Hormones and Impaired Energy Metabolism in Diabetic Kidney Disease |
| Q46876645 | Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins |
| Q40154059 | Stress-caused anergy of leukocytes towards Staphylococcal enterotoxin B and exposure transcriptome signatures |
| Q112764134 | Stretch-activated ion channels identified in the touch-sensitive structures of carnivorous Droseraceae plants |
| Q51414693 | Structural pliability adjacent to the kinase domain highlights contribution of FAK1 IDRs to cytoskeletal remodeling. |
| Q38447006 | Structure Identification and Anti-Cancer Pharmacological Prediction of Triterpenes from Ganoderma lucidum. |
| Q30689928 | Study of differential effects of TGF-beta3/BMP2 on chondrogenesis in MSC cells by gene microarray data analysis |
| Q97883939 | Study on Mechanism of Iridoid Glycosides Derivatives from Fructus Gardeniae in Jiangxi Province by Network Pharmacology |
| Q34942172 | SubNet: a Java application for subnetwork extraction |
| Q34667732 | Subcellular proteomics reveals a role for nucleo-cytoplasmic trafficking at the DNA replication origin activation checkpoint |
| Q37119662 | Suberoylanilide hydroxamic acid induces limited changes in the transcriptome of primary CD4(+) T cells. |
| Q28260516 | Subgroup-specific alternative splicing in medulloblastoma |
| Q27311660 | Succinylome analysis reveals the involvement of lysine succinylation in metabolism in pathogenic Mycobacterium tuberculosis |
| Q94547566 | Sulforaphane alters the acidification of the yeast vacuole |
| Q38451761 | Sunitinib activates Axl signaling in renal cell cancer. |
| Q87345396 | Suppression of T Cell Activation and Collagen Accumulation by an Anti-IFNAR1 mAb, Anifrolumab, in Adult Patients with Systemic Sclerosis |
| Q42219940 | Surface topology affects wetting behavior of Bacillus subtilis biofilms |
| Q64236996 | Swift metabolite changes and leaf shedding are milestones in the acclimation process of grapevine under prolonged water stress |
| Q58605203 | SyNDI: synchronous network data integration framework |
| Q92491169 | Symbiont population control by host-symbiont metabolic interaction in Symbiodiniaceae-cnidarian associations |
| Q37202808 | Sys-BodyFluid: a systematical database for human body fluid proteome research |
| Q36870844 | System biology analysis of long-term effect and mechanism of Bufei Yishen on COPD revealed by system pharmacology and 3-omics profiling |
| Q38440384 | Systematic Analysis of Protein Interaction Network Associated with Azoospermia. |
| Q35722850 | Systematic Analysis of the Molecular Mechanism Underlying Decidualization Using a Text Mining Approach |
| Q36133996 | Systematic Determination of Human Cyclin Dependent Kinase (CDK)-9 Interactome Identifies Novel Functions in RNA Splicing Mediated by the DEAD Box (DDX)-5/17 RNA Helicases |
| Q38619238 | Systematic Identification of Determinants for Single Strand Annealing Mediated Deletion Formation in Saccharomyces cerevisiae |
| Q36960706 | Systematic analysis of the molecular mechanism underlying atherosclerosis using a text mining approach |
| Q33510342 | Systematic characterisation of cellular localisation and expression profiles of proteins containing MHC ligands |
| Q36309658 | Systematic identification of an integrative network module during senescence from time-series gene expression |
| Q35149339 | Systematic identification of cell-wall related genes in Populus based on analysis of functional modules in co-expression network |
| Q35630327 | Systematic screening of polyphosphate (poly P) levels in yeast mutant cells reveals strong interdependence with primary metabolism |
| Q35679028 | Systematically dissecting the global mechanism of miRNA functions in mouse pluripotent stem cells |
| Q53132928 | Systemic analysis of inducible target of rapamycin mutants reveal a general metabolic switch controlling growth in Arabidopsis thaliana. |
| Q98734596 | Systems Analysis of Biliary Atresia Through Integration of High-Throughput Biological Data |
| Q47232023 | Systems Biology Modeling to Study Pathogen-Host Interactions |
| Q64060857 | Systems Biology Reveals and as Key Regulators of Feed Efficiency in Beef Cattle |
| Q41265082 | Systems Chemo-Biology and Transcriptomic Meta-Analysis Reveal the Molecular Roles of Bioactive Lipids in Cardiomyocyte Differentiation |
| Q36791960 | Systems biologic analysis of T regulatory cells genetic pathways in murine primary biliary cirrhosis |
| Q33791276 | Systems biological approach on neurological disorders: a novel molecular connectivity to aging and psychiatric diseases |
| Q33759579 | Systems biology analyses of gene expression and genome wide association study data in obstructive sleep apnea |
| Q28821589 | Systems biology analysis reveals role of MDM2 in diabetic nephropathy |
| Q33755957 | Systems biology of human benzene exposure |
| Q38440198 | Systems genetics reveals a transcriptional network associated with susceptibility in the maize-grey leaf spot pathosystem. |
| Q39551429 | Systems genetics reveals key genetic elements of drought induced gene regulation in diploid potato. |
| Q30276470 | Systems level analysis of the Chlamydomonas reinhardtii metabolic network reveals variability in evolutionary co-conservation |
| Q36303108 | Systems proteomics for translational network medicine |
| Q39560421 | Systems-level Proteomics of Two Ubiquitous Leaf Commensals Reveals Complementary Adaptive Traits for Phyllosphere Colonization |
| Q37412450 | Systems-level analysis of proteolytic events in increased vascular permeability and complement activation in skin inflammation |
| Q39853507 | Systems-wide analysis of a phosphatase knock-down by quantitative proteomics and phosphoproteomics |
| Q41062099 | TGMS in Rapeseed (Brassica napus) Resulted in Aberrant Transcriptional Regulation, Asynchronous Microsporocyte Meiosis, Defective Tapetum, and Fused Sexine |
| Q38078937 | Tale of a tegument transactivator: the past, present and future of human CMV pp71 |
| Q34175780 | Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana |
| Q90042128 | Tau GSTs involved in regulation of leaf abscission by comparison the gene profiling of MeGSTs in various abscission-promoting treatments in cassava abscission zones |
| Q28481434 | Tcf7 is an important regulator of the switch of self-renewal and differentiation in a multipotential hematopoietic cell line |
| Q39284486 | Temperature controls on the basal emission rate of isoprene in a tropical tree Ficus septica: exploring molecular regulatory mechanisms. |
| Q90376008 | Temporal analysis of Arabidopsis genes activated by Eucalyptus grandis NAC transcription factors associated with xylem fibre and vessel development |
| Q44395113 | Temporal and fluoride control of secondary metabolism regulates cellular organofluorine biosynthesis. |
| Q42970598 | Temporal clustering of gene expression links the metabolic transcription factor HNF4α to the ER stress-dependent gene regulatory network |
| Q36920993 | Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis. |
| Q37661498 | The 5p12 breast cancer susceptibility locus affects MRPS30 expression in estrogen-receptor positive tumors |
| Q35940731 | The Arabidopsis Domain of Unknown Function 1218 (DUF1218) Containing Proteins, MODIFYING WALL LIGNIN-1 and 2 (At1g31720/MWL-1 and At4g19370/MWL-2) Function Redundantly to Alter Secondary Cell Wall Lignin Content |
| Q35006903 | The Arabidopsis SWI2/SNF2 chromatin Remodeler BRAHMA regulates polycomb function during vegetative development and directly activates the flowering repressor gene SVP. |
| Q49099906 | The Arabidopsis leaf as a model system for investigating the role of cell cycle regulation in organ growth. |
| Q54574766 | The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health. |
| Q46832319 | The Arabidopsis thaliana RNA-binding protein FCA regulates thermotolerance by modulating the detoxification of reactive oxygen species |
| Q33351001 | The Arabidopsis thaliana checkpoint kinase WEE1 protects against premature vascular differentiation during replication stress |
| Q49060276 | The Arabidopsis thaliana homolog of yeast BRE1 has a function in cell cycle regulation during early leaf and root growth. |
| Q38613396 | The BABY BOOM transcription factor activates the LEC1-ABI3-FUS3-LEC2 network to induce somatic embryogenesis |
| Q92411725 | The Balancing Act of Intrinsically Disordered Proteins: Enabling Functional Diversity while Minimizing Promiscuity |
| Q90088301 | The CRISPR-Cas9 crADSL HeLa transcriptome: A first step in establishing a model for ADSL deficiency and SAICAR accumulation |
| Q99558078 | The CRISPR-Cas9 crATIC HeLa transcriptome: Characterization of a novel cellular model of ATIC deficiency and ZMP accumulation |
| Q41717997 | The ClpXP protease is dispensable for degradation of unfolded proteins in Staphylococcus aureus |
| Q55661997 | The Cold-Regulated Genes of Blueberry and Their Response to Overexpression of VcDDF1 in Several Tissues. |
| Q24643720 | The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists |
| Q61799955 | The Differences in Local Translatome across Distinct Neuron Types Is Mediated by Both Baseline Cellular Differences and Post-transcriptional Mechanisms |
| Q37020202 | The Drosophila transcription factor Adf-1 (nalyot) regulates dendrite growth by controlling FasII and Staufen expression downstream of CaMKII and neural activity |
| Q92306923 | The Evolution of Gene Duplicates in Angiosperms and the Impact of Protein-Protein Interactions and the Mechanism of Duplication |
| Q54655541 | The Forkhead factor FoxQ1 influences epithelial differentiation. |
| Q34634855 | The GalNAc-type O-Glycoproteome of CHO cells characterized by the SimpleCell strategy |
| Q38613269 | The IBD interactome: an integrated view of aetiology, pathogenesis and therapy. |
| Q40848638 | The IDA/IDA-LIKE and PIP/PIP-LIKE gene families in Arabidopsis: phylogenetic relationship, expression patterns, and transcriptional effect of the PIPL3 peptide. |
| Q36894104 | The Impact of Serum Amyloid P-Component on Gene Expression in RAW264.7 Mouse Macrophages |
| Q90929812 | The Interactome analysis of the Respiratory Syncytial Virus protein M2-1 suggests a new role in viral mRNA metabolism post-transcription |
| Q52714805 | The KDM4A/KDM4C/NF-κB and WDR5 epigenetic cascade regulates the activation of B cells. |
| Q35827646 | The Leishmania metaphylome: a comprehensive survey of Leishmania protein phylogenetic relationships |
| Q24296748 | The MCM-binding protein ETG1 aids sister chromatid cohesion required for postreplicative homologous recombination repair |
| Q36031974 | The Mechanism Research of Qishen Yiqi Formula by Module-Network Analysis |
| Q42085671 | The MicroRNA Interaction Network of Lipid Diseases. |
| Q99563156 | The Molecular Priming of Defense Responses is Differently Regulated in Grapevine Genotypes Following Elicitor Application against Powdery Mildew |
| Q41200981 | The Monoterpene Carvacrol Generates Endoplasmic Reticulum Stress in the Pathogenic Fungus Candida albicans |
| Q41508285 | The N-end rule pathway regulates pathogen responses in plants |
| Q34980070 | The Oct1 homolog Nubbin is a repressor of NF-κB-dependent immune gene expression that increases the tolerance to gut microbiota |
| Q92358408 | The Osteocyte Transcriptome Is Extensively Dysregulated in Mouse Models of Osteogenesis Imperfecta |
| Q51761787 | The Pathway Coexpression Network: Revealing pathway relationships. |
| Q27973158 | The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages |
| Q34552419 | The Pivotal Role of Protein Phosphorylation in the Control of Yeast Central Metabolism |
| Q37465269 | The Prion Disease Database: a comprehensive transcriptome resource for systems biology research in prion diseases |
| Q47407231 | The RIN-MC Fusion of MADS-Box Transcription Factors Has Transcriptional Activity and Modulates Expression of Many Ripening Genes. |
| Q43203789 | The RON1/FRY1/SAL1 gene is required for leaf morphogenesis and venation patterning in Arabidopsis |
| Q39125771 | The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessible |
| Q57979687 | The Serine/Threonine/Tyrosine Phosphoproteome of the Model BacteriumBacillus subtilis |
| Q92953248 | The Spinal Transcriptome after Cortical Stroke: In Search of Molecular Factors Regulating Spontaneous Recovery in the Spinal Cord |
| Q38463526 | The Transcriptome and Terpene Profile of Eucalyptus grandis Reveals Mechanisms of Defense Against the Insect Pest, Leptocybe invasa |
| Q91590409 | The Transcriptomic Toolbox: Resources for Interpreting Large Gene Expression Data within a Precision Medicine Context for Metabolic Disease Atherosclerosis |
| Q90734855 | The White-Rot Basidiomycete Dichomitus squalens Shows Highly Specific Transcriptional Response to Lignocellulose-Related Aromatic Compounds |
| Q64111311 | The acute transcriptional response to resistance exercise: impact of age and contraction mode |
| Q37739930 | The amyloid interactome: Exploring protein aggregation |
| Q27325381 | The anatomical distribution of genetic associations. |
| Q39922294 | The avian transcriptome response to malaria infection |
| Q34326306 | The carcinogenic liver fluke, Clonorchis sinensis: new assembly, reannotation and analysis of the genome and characterization of tissue transcriptomes |
| Q28534479 | The cardiac acetyl-lysine proteome |
| Q91949813 | The circular RNA CDR1as regulate cell proliferation via TMED2 and TMED10 |
| Q33742645 | The common transcriptional subnetworks of the grape berry skin in the late stages of ripening |
| Q60301577 | The construction and analysis of ceRNA networks in invasive breast cancer: a study based on The Cancer Genome Atlas |
| Q42557404 | The dJ/dS Ratio Test Reveals Hundreds of Novel Putative Cancer Drivers |
| Q51887196 | The developmental aging and origins of health and disease hypotheses explained by different protein networks. |
| Q38461700 | The durably resistant rice cultivar Digu activates defence gene expression before the full maturation of Magnaporthe oryzae appressorium. |
| Q38609286 | The effect of cell subset isolation method on gene expression in leukocytes. |
| Q35661589 | The effect of red light and far-red light conditions on secondary metabolism in agarwood |
| Q35100249 | The effect of smoking on DNA methylation of peripheral blood mononuclear cells from African American women |
| Q35797666 | The effects of mitochondrial genotype on hypoxic survival and gene expression in a hybrid population of the killifish, Fundulus heteroclitus |
| Q37104711 | The epidermis coordinates auxin-induced stem growth in response to shade. |
| Q36804739 | The extensive and condition-dependent nature of epistasis among whole-genome duplicates in yeast |
| Q30140976 | The first draft genome of the aquatic model plant Lemna minor opens the route for future stress physiology research and biotechnological applications |
| Q33364196 | The founder-cell transcriptome in the Arabidopsis apetala1 cauliflower inflorescence meristem |
| Q30982358 | The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms |
| Q36924454 | The gene expression landscape of breast cancer is shaped by tumor protein p53 status and epithelial-mesenchymal transition |
| Q38844234 | The gene expression profiling of hepatocellular carcinoma by a network analysis approach shows a dominance of intrinsically disordered proteins (IDPs) between hub nodes. |
| Q38554532 | The generation of phosphoserine stretches in phosphoproteins: mechanism and significance |
| Q58763286 | The genome of Naegleria lovaniensis, the basis for a comparative approach to unravel pathogenicity factors of the human pathogenic amoeba N. fowleri |
| Q60912405 | The genome-wide transcriptional consequences of the nullisomic-tetrasomic stocks for homoeologous group 7 in bread wheat |
| Q50026370 | The genotype-phenotype relationships in the light of natural selection. |
| Q42773393 | The grapevine expression atlas reveals a deep transcriptome shift driving the entire plant into a maturation program |
| Q31126433 | The green ash transcriptome and identification of genes responding to abiotic and biotic stresses |
| Q39084839 | The heat-stress factor HSFA6b connects ABA signaling and ABA-mediated heat responses. |
| Q42513899 | The histone methyltransferase SDG8 mediates the epigenetic modification of light and carbon responsive genes in plants |
| Q37395221 | The human protein coevolution network. |
| Q33256124 | The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins |
| Q35113189 | The hypervariable amino-terminus of P1 protease modulates potyviral replication and host defense responses. |
| Q35740438 | The impact of classification of interest on predictive toxicogenomics |
| Q33911970 | The inducible blockage of RNAi reveals a role for polyunsaturated fatty acids in the regulation of dsRNA-endocytic capacity in Bactrocera dorsalis |
| Q35855893 | The influence of scaffold elasticity on germ layer specification of human embryonic stem cells |
| Q28468675 | The involvement of cholesterol in sepsis and tolerance to lipopolysaccharide highlighted by the transcriptome analysis of zebrafish (Danio rerio) |
| Q28573050 | The last enzyme of the de novo purine synthesis pathway 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (ATIC) plays a central role in insulin signaling and the Golgi/endosomes protein network |
| Q33841945 | The light responsive transcriptome of the zebrafish: function and regulation. |
| Q34266527 | The local transcriptome in the synaptic neuropil revealed by deep sequencing and high-resolution imaging |
| Q33850661 | The membrane proteome of sensory cilia to the depth of olfactory receptors |
| Q37657589 | The miRNAome of Catharanthus roseus: identification, expression analysis, and potential roles of microRNAs in regulation of terpenoid indole alkaloid biosynthesis |
| Q50508228 | The nuclear proteome of the green alga Chlamydomonas reinhardtii. |
| Q46655597 | The origin and genetic differentiation of the socially parasitic aphid Tamalia inquilinus |
| Q38489122 | The plasticity of the grapevine berry transcriptome |
| Q64120564 | The promising novel biomarkers and candidate small molecule drugs in kidney renal clear cell carcinoma: Evidence from bioinformatics analysis of high-throughput data |
| Q35573684 | The reverse evolution from multicellularity to unicellularity during carcinogenesis |
| Q37740766 | The role of CRKL in breast cancer metastasis: insights from systems biology |
| Q92366404 | The role of myoglobin in epithelial cancers: Insights from transcriptomics |
| Q33626633 | The tobacco genome sequence and its comparison with those of tomato and potato |
| Q38736060 | The transcript elongation factor SPT4/SPT5 is involved in auxin-related gene expression in Arabidopsis |
| Q34387588 | The transcription profile of Tax-3 is more similar to Tax-1 than Tax-2: insights into HTLV-3 potential leukemogenic properties |
| Q39043617 | The transcriptional regulatory network mediated by banana (Musa acuminata) dehydration-responsive element binding (MaDREB) transcription factors in fruit ripening |
| Q33705566 | The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis. |
| Q41478182 | The transcriptome of Verticillium dahliae-infected Nicotiana benthamiana determined by deep RNA sequencing |
| Q34157321 | The transcriptome of compatible and incompatible interactions of potato (Solanum tuberosum) with Phytophthora infestans revealed by DeepSAGE analysis |
| Q38544332 | The unfolded protein response and its potential role in Huntington's disease elucidated by a systems biology approach. |
| Q46900500 | The unfolded protein response governs integrity of the haematopoietic stem-cell pool during stress. |
| Q37679716 | The use of network analyses for elucidating mechanisms in cardiovascular disease |
| Q28119042 | The variant Polycomb Repressor Complex 1 component PCGF1 interacts with a pluripotency sub-network that includes DPPA4, a regulator of embryogenesis |
| Q53675660 | The wheat resistance gene Lr34 results in the constitutive induction of multiple defense pathways in transgenic barley. |
| Q54172897 | The yeast ζ-crystallin/NADPH:quinone oxidoreductase (Zta1p) is under nutritional control by the target of rapamycin pathway and is involved in the regulation of argininosuccinate lyase mRNA half-life. |
| Q45872331 | Therapeutic Inhibition of Inflammatory Monocyte Recruitment Reduces Steatohepatitis and Liver Fibrosis |
| Q92461127 | Therapeutic targeting of macrophages enhances chemotherapy efficacy by unleashing type I interferon response |
| Q48308902 | Thermal acclimation in Arabidopsis lyrata: genotypic costs and transcriptional changes. |
| Q37036682 | Thiouracil cross-linking mass spectrometry: a cell-based method to identify host factors involved in viral amplification |
| Q34071483 | Time to recurrence and survival in serous ovarian tumors predicted from integrated genomic profiles |
| Q35927322 | Time-Course Transcriptome Analysis Reveals Resistance Genes of Panax ginseng Induced by Cylindrocarpon destructans Infection Using RNA-Seq |
| Q35860807 | Time-Dependent Transcriptional Changes in Axenic Giardia duodenalis Trophozoites |
| Q37575052 | Time-Series Analyses of Transcriptomes and Proteomes Reveal Molecular Networks Underlying Oil Accumulation in Canola |
| Q38898871 | Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis |
| Q51062895 | Tissue damage in organic rainbow trout muscle investigated by proteomics and bioinformatics. |
| Q35155375 | Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes |
| Q37977413 | Tools for protein-protein interaction network analysis in cancer research. |
| Q30973696 | Tools for visualization and analysis of molecular networks, pathways, and -omics data |
| Q56889970 | Toward a systems level view of the ECM and related proteins: a framework for the systematic definition and analysis of biological systems |
| Q28487187 | Toxicological effects of the different substances in tobacco smoke on human embryonic development by a systems chemo-biology approach |
| Q89865989 | Toxicological response of the model fungus Saccharomyces cerevisiae to different concentrations of commercial graphene nanoplatelets |
| Q37681839 | Tracking of time-varying genomic regulatory networks with a LASSO-Kalman smoother |
| Q47637379 | Transcription factor 19 interacts with histone 3 lysine 4 trimethylation and controls gluconeogenesis via the nucleosome-remodeling-deacetylase complex |
| Q36673413 | Transcription factor complex AP-1 mediates inflammation initiated by Chlamydia pneumoniae infection. |
| Q36592445 | Transcription, Signaling Receptor Activity, Oxidative Phosphorylation, and Fatty Acid Metabolism Mediate the Presence of Closely Related Species in Distinct Intertidal and Cold-Seep Habitats |
| Q37570302 | Transcriptional Analysis of Acinetobacter sp. neg1 Capable of Degrading Ochratoxin A. |
| Q27318654 | Transcriptional Dynamics Driving MAMP-Triggered Immunity and Pathogen Effector-Mediated Immunosuppression in Arabidopsis Leaves Following Infection with Pseudomonas syringae pv tomato DC3000 |
| Q42488790 | Transcriptional Framework of Male Gametogenesis in the Liverwort Marchantia polymorpha L. |
| Q36223807 | Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation. |
| Q35895685 | Transcriptional Regulations on the Low-Temperature-Induced Floral Transition in an Orchidaceae Species, Dendrobium nobile: An Expressed Sequence Tags Analysis |
| Q64089932 | Transcriptional alterations in Caenorhabditis elegans following exposure to an anthelmintic fraction of the plant Picria fel-terrae Lour |
| Q35246561 | Transcriptional analysis identifies key genes involved in metabolism, fibrosis/tissue repair and the immune response against Fasciola hepatica in sheep liver. |
| Q30650685 | Transcriptional events co-regulated by hypoxia and cold stresses in Zebrafish larvae |
| Q34172344 | Transcriptional evidence for inferred pattern of pollen tube-stigma metabolic coupling during pollination |
| Q34455583 | Transcriptional profiling of Saccharomyces cerevisiae exposed to propolis |
| Q51948956 | Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. |
| Q90598872 | Transcriptional regulatory framework for vascular cambium development in Arabidopsis roots |
| Q36817906 | Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses. |
| Q36533608 | Transcriptional repression of the APC/C activator CCS52A1 promotes active termination of cell growth. |
| Q45203499 | Transcriptional response of HT-29 intestinal epithelial cells to human and bovine milk oligosaccharides. |
| Q94545177 | Transcriptome Analysis Reveals the Flexibility of Cordycepin Network in Cordyceps militaris Activated by L-Alanine Addition |
| Q37672409 | Transcriptome Analysis of Flowering Time Genes under Drought Stress in Maize Leaves |
| Q38519921 | Transcriptome Analysis of Soybean Leaf Abscission Identifies Transcriptional Regulators of Organ Polarity and Cell Fate |
| Q35920739 | Transcriptome Analysis of the Emerald Ash Borer (EAB), Agrilus planipennis: De Novo Assembly, Functional Annotation and Comparative Analysis |
| Q47795361 | Transcriptome Association Identifies Regulators of Wheat Spike Architecture |
| Q42362541 | Transcriptome Profiling in Systems Vascular Medicine |
| Q34508723 | Transcriptome analyses reveal genotype- and developmental stage-specific molecular responses to drought and salinity stresses in chickpea |
| Q92559978 | Transcriptome analysis defines myocardium gene signatures in children with ToF and ASD and reveals disease-specific molecular reprogramming in response to surgery with cardiopulmonary bypass |
| Q85282151 | Transcriptome analysis highlights changes in the leaves of maize plants cultivated in acidic soil containing toxic levels of Al(3+) |
| Q33968461 | Transcriptome analysis of Catharanthus roseus for gene discovery and expression profiling |
| Q40451790 | Transcriptome analysis of a wild bird reveals physiological responses to the urban environment. |
| Q33671452 | Transcriptome analysis of bagging-treated red Chinese sand pear peels reveals light-responsive pathway functions in anthocyanin accumulation |
| Q36108085 | Transcriptome analysis of smooth cordgrass (Spartina alterniflora Loisel), a monocot halophyte, reveals candidate genes involved in its adaptation to salinity |
| Q34162566 | Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using Deep RNA sequencing |
| Q33355246 | Transcriptome analysis of tomato flower pedicel tissues reveals abscission zone-specific modulation of key meristem activity genes |
| Q55487109 | Transcriptome and Expression Profiling Analysis of Recalcitrant Tea (Camellia sinensis L.) Seeds Sensitive to Dehydration. |
| Q92877059 | Transcriptome and Network Dissection of Microsatellite Stable and Highly Instable Colorectal Cancer |
| Q31061477 | Transcriptome and metabolite profiling reveals that prolonged drought modulates the phenylpropanoid and terpenoid pathway in white grapes (Vitis vinifera L.). |
| Q39037131 | Transcriptome changes in Arabidopsis thaliana infected with Pseudomonas syringae during drought recovery |
| Q34297093 | Transcriptome kinetics of circulating neutrophils during human experimental endotoxemia |
| Q54257508 | Transcriptome landscape of a bacterial pathogen under plant immunity. |
| Q92669055 | Transcriptome meta-analysis reveals differences of immune profile between eutopic endometrium from stage I-II and III-IV endometriosis independently of hormonal milieu |
| Q33784442 | Transcriptome of Pterospermum kingtungense provides implications on the mechanism underlying its rapid vegetative growth and limestone adaption |
| Q89576045 | Transcriptome of tambaqui Colossoma macropomum during gonad differentiation: Different molecular signals leading to sex identity |
| Q55434691 | Transcriptome profiling of Issatchenkia orientalis under ethanol stress. |
| Q35951917 | Transcriptome profiling of gene expression in fall dormant and nondormant alfalfa. |
| Q34341021 | Transcriptome profiling of genes involved in neural tube closure during human embryonic development using long serial analysis of gene expression (long-SAGE). |
| Q55230757 | Transcriptome profiling reveals regulatory mechanisms underlying corolla senescence in petunia. |
| Q35672647 | Transcriptome response signatures associated with the overexpression of a mitochondrial uncoupling protein (AtUCP1) in tobacco |
| Q39385007 | Transcriptome responses to combinations of stresses in Arabidopsis |
| Q41775744 | Transcriptome signatures of class I and III stress response deregulation in Lactobacillus plantarum reveal pleiotropic adaptation |
| Q38619068 | Transcriptome-based network analysis reveals renal cell type-specific dysregulation of hypoxia-associated transcripts |
| Q39604232 | Transcriptome-based profiling of yolk sac-derived macrophages reveals a role for Irf8 in macrophage maturation |
| Q36619854 | Transcriptome-wide expansion of non-coding regulatory switches: evidence from co-occurrence of Alu exonization, antisense and editing |
| Q34530150 | Transcriptome-wide profiling and posttranscriptional analysis of hematopoietic stem/progenitor cell differentiation toward myeloid commitment |
| Q38455861 | Transcriptome-wide sequencing provides insights into geocarpy in peanut (Arachis hypogaea L.). |
| Q92093451 | Transcriptome-wide shift from photosynthesis and energy metabolism upon endogenous fluid protein depletion in young Nepenthes ampullaria pitchers |
| Q28727572 | Transcriptomes reveal genetic signatures underlying physiological variations imposed by different fermentation conditions in Lactobacillus plantarum |
| Q47570626 | Transcriptomic Analysis of Ribosome-Bound mRNA in Cortical Neurites In Vivo. |
| Q35898739 | Transcriptomic Analysis of Tea Plant Responding to Drought Stress and Recovery |
| Q27321049 | Transcriptomic Characterization of Innate and Acquired Immune Responses in Red-Legged Partridges (Alectoris rufa): A Resource for Immunoecology and Robustness Selection |
| Q46393662 | Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells |
| Q37513018 | Transcriptomic Profiling of Soybean in Response to High-Intensity UV-B Irradiation Reveals Stress Defense Signaling |
| Q42235795 | Transcriptomic Profiling of the Allorecognition Response to Grafting in the Demosponge Amphimedon queenslandica. |
| Q33362782 | Transcriptomic Signature of the SHATTERPROOF2 Expression Domain Reveals the Meristematic Nature of Arabidopsis Gynoecial Medial Domain |
| Q28540234 | Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damage |
| Q28831391 | Transcriptomic analysis of mouse liver reveals a potential hepato-enteric pathogenic mechanism in acute Toxoplasma gondii infection |
| Q35033944 | Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin |
| Q64260450 | Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress |
| Q93023384 | Transcriptomic and functional analyses of 3D placental extravillous trophoblast spheroids |
| Q48366345 | Transcriptomic and metabolic analyses provide new insights into chilling injury in peach fruit. |
| Q36409473 | Transcriptomic changes reveal gene networks responding to the overexpression of a blueberry DWARF AND DELAYED FLOWERING 1 gene in transgenic blueberry plants |
| Q34985020 | Transcriptomic characterization of cold acclimation in larval zebrafish |
| Q35846267 | Transcriptomic characterization of the dorsal lobes after hepatectomy of the ventral lobe in zebrafish |
| Q40351342 | Transcriptomic investigation of meat tenderness in two Italian cattle breeds. |
| Q31100144 | Transcriptomic network analyses of leaf dehydration responses identify highly connected ABA and ethylene signaling hubs in three grapevine species differing in drought tolerance |
| Q42777538 | Transcriptomic profiling of chemical exposure reveals roles of Yap1 in protecting yeast cells from oxidative and other types of stresses. |
| Q42775325 | Transcriptomic profiling revealed an important role of cell wall remodeling and ethylene signaling pathway during salt acclimation in Arabidopsis. |
| Q36175240 | Transcriptomic responses of a simplified soil microcosm to a plant pathogen and its biocontrol agent reveal a complex reaction to harsh habitat |
| Q35918441 | Transcriptomics Modeling of the Late-Gestation Fetal Pituitary Response to Transient Hypoxia |
| Q38498171 | Transcriptomics and systems biology analysis in identification of specific pathways involved in cacao resistance and susceptibility to witches' broom disease. |
| Q35076038 | Transcriptomics of salinity tolerance capacity in Arctic charr (Salvelinus alpinus): a comparison of gene expression profiles between divergent QTL genotypes |
| Q33912839 | Transcriptomics of the fetal hypothalamic response to brachiocephalic occlusion and estradiol treatment |
| Q64992531 | Transcriptomics of the grape berry shrivel ripening disorder. |
| Q98156858 | Transfer of endogenous small RNAs between branches of scions and rootstocks in grafted sweet cherry trees |
| Q35610680 | Translational analysis of mouse and human placental protein and mRNA reveals distinct molecular pathologies in human preeclampsia |
| Q36708055 | Translational profiling of hypocretin neurons identifies candidate molecules for sleep regulation |
| Q92218127 | Trypanosoma brucei ribonuclease H2A is an essential R-loop processing enzyme whose loss causes DNA damage during transcription initiation and antigenic variation |
| Q93035398 | Tuberomics: a molecular profiling for the adaption of edible fungi (Tuber magnatum Pico) to different natural environments |
| Q92838836 | Tumor necrosis factor α promotes HEp-2 cell proliferation via toll-like receptor 4 and NF-κB signaling pathways |
| Q40087622 | Two Plant-Derived Aporphinoid Alkaloids Exert Their Antifungal Activity by Disrupting Mitochondrial Iron-Sulfur Cluster Biosynthesis |
| Q33336429 | Ubiquitin E3 ligase Ring1b/Rnf2 of polycomb repressive complex 1 contributes to stable maintenance of mouse embryonic stem cells |
| Q33787804 | Uncoupling JAK3 activation induces apoptosis in human lymphoid cancer cells via regulating critical survival pathways |
| Q38657767 | Uncovering the exercise-related proteome signature in skeletal muscle |
| Q38921560 | Understanding Epstein-Barr Virus Life Cycle with Proteomics: A Temporal Analysis of Ubiquitination During Virus Reactivation. |
| Q36345857 | Understanding the molecular mechanism of interventions in treating rheumatoid arthritis patients with corresponding traditional chinese medicine patterns based on bioinformatics approach. |
| Q33537388 | Unified translation repression mechanism for microRNAs and upstream AUGs |
| Q34200732 | Unique proteomic signatures distinguish macrophages and dendritic cells |
| Q91106231 | Unraveling oxidative stress response in the cestode parasite Echinococcus granulosus |
| Q39298842 | Unraveling toxicological mechanisms and predicting toxicity classes with gene dysregulation networks |
| Q31009476 | Updates on drug-target network; facilitating polypharmacology and data integration by growth of DrugBank database. |
| Q37080390 | Uridylation prevents 3' trimming of oligoadenylated mRNAs |
| Q55332102 | Use of Haploid Model of Candida albicans to Uncover Mechanism of Action of a Novel Antifungal Agent. |
| Q27342088 | Using Multi-objective Optimization to Identify Dynamical Network Biomarkers as Early-warning Signals of Complex Diseases |
| Q47381075 | Using a Next-Generation Sequencing Approach to Profile MicroRNAs from Human Origin. |
| Q34794421 | Using an isolated rat kidney model to identify kidney origin proteins in urine |
| Q36574268 | Using contrast patterns between true complexes and random subgraphs in PPI networks to predict unknown protein complexes. |
| Q37460606 | Uterine glands impact uterine receptivity, luminal fluid homeostasis and blastocyst implantation |
| Q31112212 | Validating module network learning algorithms using simulated data |
| Q33402870 | Variable locus length in the human genome leads to ascertainment bias in functional inference for non-coding elements. |
| Q90912693 | VcFT-induced mobile florigenic signals in transgenic and transgrafted blueberries |
| Q30878062 | Viewing the proteome: how to visualize proteomics data? |
| Q37245690 | VisANT 3.5: multi-scale network visualization, analysis and inference based on the gene ontology. |
| Q30000971 | VisuaLRTC: a new view on lateral root initiation by combining specific transcriptome data sets |
| Q30653311 | Visual analysis of biological data-knowledge networks |
| Q38462184 | Visual annotation display (VLAD): a tool for finding functional themes in lists of genes |
| Q50551444 | Visualization and Analysis of MiRNA-Targets Interactions Networks. |
| Q28709938 | Visualization of protein interaction networks: problems and solutions |
| Q38440636 | Visualizing GO Annotations |
| Q28260784 | Visualizing networks |
| Q55516447 | WEGO 2.0: a web tool for analyzing and plotting GO annotations, 2018 update. |
| Q90401769 | Weighted Gene Co-Expression Analyses Point to Long Non-Coding RNA Hub Genes at Different Schistosoma mansoni Life-Cycle Stages |
| Q38704601 | WetA bridges cellular and chemical development in Aspergillus flavus. |
| Q37988648 | What has proteomics taught us about Leishmania development? |
| Q36410859 | Whole Plant Temperature Manipulation Affects Flavonoid Metabolism and the Transcriptome of Grapevine Berries. |
| Q36278954 | Whole-genome association analysis of pork meat pH revealed three significant regions and several potential genes in Finnish Yorkshire pigs |
| Q47112790 | Whole-genome sequencing and SNV genotyping of 'Nebbiolo' (Vitis vinifera L.) clones. |
| Q40379824 | Widespread Down-Regulation of Cardiac Mitochondrial and Sarcomeric Genes in Patients With Sepsis |
| Q91329962 | Widespread long-range cis-regulatory elements in the maize genome |
| Q38534062 | Wigwams: identifying gene modules co-regulated across multiple biological conditions. |
| Q28710493 | Wiki-pi: a web-server of annotated human protein-protein interactions to aid in discovery of protein function |
| Q38439863 | Working with Ontologies. |
| Q42777692 | Wounding Triggers Callus Formation via Dynamic Hormonal and Transcriptional Changes |
| Q38682025 | Yeast non-coding RNA interaction network |
| Q90600175 | [A comprehensive analysis of potential prognostic biomarkers for MYCN-amplified neuroblastoma] |
| Q50549692 | [Screening of biomarkers related with leukocyte responses early after burn injury in mice by differential gene expression profiling]. |
| Q38373934 | agriGO: a GO analysis toolkit for the agricultural community |
| Q37682130 | bHLH142 regulates various metabolic pathway-related genes to affect pollen development and anther dehiscence in rice. |
| Q38675639 | ceRNAs in plants: computational approaches and associated challenges for target mimic research |
| Q34070756 | clusterMaker: a multi-algorithm clustering plugin for Cytoscape |
| Q47149565 | eQTLs Regulating Transcript Variations Associated with Rapid Internode Elongation in Deepwater Rice. |
| Q55497195 | eXamine: Visualizing annotated networks in Cytoscape. |
| Q35995136 | g:Profiler-a web server for functional interpretation of gene lists (2016 update) |
| Q40996671 | i-cisTarget 2015 update: generalized cis-regulatory enrichment analysis in human, mouse and fly. |
| Q36444438 | iCTNet2: integrating heterogeneous biological interactions to understand complex traits |
| Q34041069 | iRefScape. A Cytoscape plug-in for visualization and data mining of protein interaction data from iRefIndex |
| Q35212382 | iRegulon: from a gene list to a gene regulatory network using large motif and track collections |
| Q41660420 | iTRAQ-Based Quantitative Proteomic Analysis Reveals Cold Responsive Proteins Involved in Leaf Senescence in Upland Cotton (Gossypium hirsutum L.). |
| Q49874364 | iTRAQ-based quantitative proteomics of strong and weak biofilm formers of Enterococcus faecalis reveals novel regulators of biofilm formation. |
| Q36529502 | inv(16)/t(16;16) acute myeloid leukemia with non-type A CBFB-MYH11 fusions associate with distinct clinical and genetic features and lack KIT mutations |
| Q92193164 | m6A mRNA Methylation Regulates Human β-Cell Biology in Physiological States and in Type 2 Diabetes |
| Q41932863 | mRNA-Seq reveals accumulation followed by reduction of small nuclear and nucleolar RNAs in yeast exposed to antiviral ribavirin. |
| Q34566878 | miR-296-3p, miR-298-5p and their downstream networks are causally involved in the higher resistance of mammalian pancreatic α cells to cytokine-induced apoptosis as compared to β cells |
| Q48182995 | miR-9a mediates the role of Lethal giant larvae as an epithelial growth inhibitor in Drosophila. |
| Q64072961 | micro-RNAs dependent regulation of DNMT and HIF1α gene expression in thrombotic disorders |
| Q36320820 | rNAV 2.0: a visualization tool for bacterial sRNA-mediated regulatory networks mining |
| Q38432961 | vhfRNAi: a web-platform for analysis of host genes involved in viral infections discovered by genome wide RNAi screens. |
| Q34726881 | β-catenin causes renal dysplasia via upregulation of Tgfβ2 and Dkk1 |
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