| scholarly article | Q13442814 |
| P50 | author | Atsushi Fukushima | Q57687590 |
| P2093 | author name string | Miyako Kusano | |
| P2860 | cites work | Imaging of plant cell walls by confocal Raman microscopy | Q47228001 |
| Antisense inhibition of the 2-oxoglutarate dehydrogenase complex in tomato demonstrates its importance for plant respiration and during leaf senescence and fruit maturation | Q47429314 | ||
| Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. | Q48083166 | ||
| Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks. | Q48439138 | ||
| Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants. | Q51065220 | ||
| Arabidopsis roots and shoots show distinct temporal adaptation patterns toward nitrogen starvation. | Q51533729 | ||
| Arabidopsis coordinates the diurnal regulation of carbon allocation and growth across a wide range of photoperiods | Q51777423 | ||
| Maize source leaf adaptation to nitrogen deficiency affects not only nitrogen and carbon metabolism but also control of phosphate homeostasis | Q53145718 | ||
| Organ and cellular localization of asparagine synthetase in rice plants | Q53806059 | ||
| Alteration of the interconversion of pyruvate and malate in the plastid or cytosol of ripening tomato fruit invokes diverse consequences on sugar but similar effects on cellular organic acid, metabolism, and transitory starch accumulation. | Q54278995 | ||
| Arabidopsis phosphoglycerate dehydrogenase1 of the phosphoserine pathway is essential for development and required for ammonium assimilation and tryptophan biosynthesis. | Q54398888 | ||
| KNApSAcK Family Databases: Integrated Metabolite-Plant Species Databases for Multifaceted Plant Research | Q20900558 | ||
| Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles | Q21145898 | ||
| ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context | Q21284234 | ||
| Data, information, knowledge and principle: back to metabolism in KEGG | Q24568332 | ||
| RNA-Seq: a revolutionary tool for transcriptomics | Q24596169 | ||
| Wisdom of crowds for robust gene network inference | Q24604615 | ||
| Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks | Q24633890 | ||
| Metabolite profiling in plant biology: platforms and destinations | Q24804619 | ||
| Sparse graphical Gaussian modeling of the isoprenoid gene network in Arabidopsis thaliana | Q24809593 | ||
| Network biology: understanding the cell's functional organization | Q27861027 | ||
| Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize | Q28359954 | ||
| Metabolomics – the link between genotypes and phenotypes | Q28540942 | ||
| PubChem: a public information system for analyzing bioactivities of small molecules | Q28842768 | ||
| BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks | Q29547427 | ||
| GenePattern 2.0 | Q29614171 | ||
| Using Bayesian networks to analyze expression data | Q29617295 | ||
| Network deconvolution as a general method to distinguish direct dependencies in networks | Q30352074 | ||
| Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis | Q30479212 | ||
| Transcriptome data modeling for targeted plant metabolic engineering | Q30580515 | ||
| A global approach to analysis and interpretation of metabolic data for plant natural product discovery. | Q30595678 | ||
| Daylength and spatial expression of a gibberellin 20-oxidase isolated from hybrid aspen (Populus tremula L. x P. tremuloides Michx.). | Q30830966 | ||
| Discovery of meaningful associations in genomic data using partial correlation coefficients | Q30949455 | ||
| A framework of integrating gene relations from heterogeneous data sources: an experiment on Arabidopsis thaliana | Q31047912 | ||
| Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregressive process | Q31112208 | ||
| An integrated genetic, genomic and systems approach defines gene networks regulated by the interaction of light and carbon signaling pathways in Arabidopsis | Q33326898 | ||
| Activity-dormancy transition in the cambial meristem involves stage-specific modulation of auxin response in hybrid aspen | Q33350563 | ||
| Arabidopsis gene co-expression network and its functional modules. | Q33511670 | ||
| Genome-wide mapping of alternative splicing in Arabidopsis thaliana | Q33560271 | ||
| RNA-seq: from technology to biology | Q33604404 | ||
| Comprehensive comparative analysis of strand-specific RNA sequencing methods | Q33658471 | ||
| Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation | Q33740065 | ||
| Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice. | Q33799770 | ||
| Rational association of genes with traits using a genome-scale gene network for Arabidopsis thaliana | Q33801141 | ||
| MALDI-imaging mass spectrometry - An emerging technique in plant biology | Q33861776 | ||
| Detecting novel associations in large data sets | Q34102548 | ||
| The study of eQTL variations by RNA-seq: from SNPs to phenotypes | Q34152797 | ||
| Databases on food phytochemicals and their health-promoting effects | Q34173387 | ||
| Bioinformatics Tools for Mass Spectroscopy-Based Metabolomic Data Processing and Analysis | Q34205992 | ||
| Surveying the plant's world by magnetic resonance imaging. | Q34208173 | ||
| Comparative study of RNA-seq- and microarray-derived coexpression networks in Arabidopsis thaliana. | Q34325821 | ||
| Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus | Q34446562 | ||
| Metabolite profiling and network analysis reveal coordinated changes in grapevine water stress response | Q34477974 | ||
| Network analysis: tackling complex data to study plant metabolism | Q34514385 | ||
| Systematic Comparison of C3 and C4 Plants Based on Metabolic Network Analysis | Q34529491 | ||
| Steps towards an integrated view of nitrogen metabolism | Q34576080 | ||
| MALDI mass spectrometry‐assisted molecular imaging of metabolites during nitrogen fixation in the Medicago truncatula–Sinorhizobium meliloti symbiosis | Q34646548 | ||
| Computational methods for transcriptome annotation and quantification using RNA-seq | Q34660508 | ||
| Adaptation of maize source leaf metabolism to stress related disturbances in carbon, nitrogen and phosphorus balance | Q34792010 | ||
| The mutual information: detecting and evaluating dependencies between variables. | Q34973910 | ||
| Plasticity regulators modulate specific root traits in discrete nitrogen environments | Q34988058 | ||
| Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots | Q35015781 | ||
| Metabolite profiling of a NIST Standard Reference Material for human plasma (SRM 1950): GC-MS, LC-MS, NMR, and clinical laboratory analyses, libraries, and web-based resources | Q35023775 | ||
| Extending biochemical databases by metabolomic surveys | Q35084955 | ||
| Mass spectrometry strategies in metabolomics | Q35110965 | ||
| Genetic dissection of the biotic stress response using a genome-scale gene network for rice. | Q35546770 | ||
| Metabolite Signature during Short-Day Induced Growth Cessation in Populus | Q35970040 | ||
| RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics | Q36088542 | ||
| An Arabidopsis gene network based on the graphical Gaussian model. | Q36098278 | ||
| Metabolic regulation underlying tomato fruit development | Q36383147 | ||
| Cell-specific nitrogen responses mediate developmental plasticity | Q36393066 | ||
| Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1 | Q36534251 | ||
| Approaches for extracting practical information from gene co-expression networks in plant biology | Q36717674 | ||
| Assimilation of ammonium ions and reutilization of nitrogen in rice (Oryza sativa L.). | Q36756938 | ||
| Development of a Standard Reference Material for metabolomics research | Q36771699 | ||
| Nitrate transport and signalling. | Q36829158 | ||
| Systematic prediction of gene function in Arabidopsis thaliana using a probabilistic functional gene network | Q36846036 | ||
| Decoding genes with coexpression networks and metabolomics - 'majority report by precogs'. | Q37045376 | ||
| Network link prediction by global silencing of indirect correlations | Q37086243 | ||
| Metabolomics for functional genomics, systems biology, and biotechnology | Q37371858 | ||
| Co-expression tools for plant biology: opportunities for hypothesis generation and caveats | Q37588006 | ||
| Hormonal control of nitrogen acquisition: roles of auxin, abscisic acid, and cytokinin | Q37825346 | ||
| Metabolomic approaches toward understanding nitrogen metabolism in plants | Q37827290 | ||
| Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants | Q37977661 | ||
| Mass spectrometry‐based metabolomics towards understanding of gene functions with a diversity of biological contexts | Q38034482 | ||
| Network analysis for gene discovery in plant-specialized metabolism | Q38075582 | ||
| Analysis of metabolic flux using dynamic labelling and metabolic modelling | Q38082829 | ||
| Current challenges and future potential of tomato breeding using omics approaches | Q38103855 | ||
| Systems-integration of plant metabolism: means, motive and opportunity | Q38104051 | ||
| Systems analysis of metabolic phenotypes: what have we learnt? | Q38153913 | ||
| Towards revealing the functions of all genes in plants | Q38162601 | ||
| PlantMetabolomics.org: a web portal for plant metabolomics experiments | Q38488561 | ||
| Nitrogen deprivation promotes Populus root growth through global transcriptome reprogramming and activation of hierarchical genetic networks. | Q38488766 | ||
| High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions | Q38502304 | ||
| Characterization of metabolic states of Arabidopsis thaliana under diverse carbon and nitrogen nutrient conditions via targeted metabolomic analysis | Q41912505 | ||
| Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate | Q42136109 | ||
| A novel family of γ-gliadin genes are highly regulated by nitrogen supply in developing wheat grain | Q42425160 | ||
| Proteomic and metabolic profiling of rice suspension culture cells as a model to study abscisic acid signaling response pathways in plants | Q42853060 | ||
| Nitrogen-dependent regulation of de novo cytokinin biosynthesis in rice: the role of glutamine metabolism as an additional signal | Q42925954 | ||
| Metabolic profiling of maize mutants deficient for two glutamine synthetase isoenzymes using 1H-NMR-based metabolomics | Q43252966 | ||
| Characterization of a NADH-Dependent Glutamate Dehydrogenase Mutant of Arabidopsis Demonstrates the Key Role of this Enzyme in Root Carbon and Nitrogen Metabolism | Q43548588 | ||
| Metabolite profiling reveals distinct changes in carbon and nitrogen metabolism in phosphate-deficient barley plants (Hordeum vulgare L.). | Q43621476 | ||
| Direct infusion mass spectrometry of oxylipin-containing Arabidopsis membrane lipids reveals varied patterns in different stress responses. | Q44600364 | ||
| Nitrogen recycling and remobilization are differentially controlled by leaf senescence and development stage in Arabidopsis under low nitrogen nutrition | Q44607009 | ||
| An RNA sequencing transcriptome analysis reveals novel insights into molecular aspects of the nitrate impact on the nodule activity of Medicago truncatula | Q45800349 | ||
| Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis | Q46215579 | ||
| Transcriptomic and metabolic changes associated with photorespiratory ammonium accumulation in the model legume Lotus japonicus | Q46407087 | ||
| Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range | Q46844323 | ||
| Glucose elevates NITRATE TRANSPORTER2.1 protein levels and nitrate transport activity independently of its HEXOKINASE1-mediated stimulation of NITRATE TRANSPORTER2.1 expression | Q46982105 | ||
| P433 | issue | 19 | |
| P921 | main subject | crop plant | Q129257075 |
| P304 | page(s) | 5619-5630 | |
| P577 | publication date | 2014-08-16 | |
| P1433 | published in | Journal of Experimental Botany | Q6295179 |
| P1476 | title | A network perspective on nitrogen metabolism from model to crop plants using integrated 'omics' approaches | |
| P478 | volume | 65 |
| Q34617888 | "Omics" of maize stress response for sustainable food production: opportunities and challenges. |
| Q92065187 | BioHackathon 2015: Semantics of data for life sciences and reproducible research |
| Q28817094 | Comparative Characterization of the Leaf Tissue of Physalis alkekengi and Physalis peruviana Using RNA-seq and Metabolite Profiling |
| Q90681480 | Data Integration in Poplar: 'Omics Layers and Integration Strategies |
| Q47095558 | Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana |
| Q26784195 | Engineering food crops to grow in harsh environments |
| Q64108830 | Facing Climate Change: Biotechnology of Iconic Mediterranean Woody Crops |
| Q55218928 | Gene Discovery of Characteristic Metabolic Pathways in the Tea Plant (Camellia sinensis) Using 'Omics'-Based Network Approaches: A Future Perspective. |
| Q28548262 | High-Throughput Sequencing and De Novo Assembly of Red and Green Forms of the Perilla frutescens var. crispa Transcriptome |
| Q91353603 | Labeling Maize (Zea mays L.) Leaves with 15 NH4+ and Monitoring Nitrogen Incorporation into Amino Acids by GC/MS Analysis |
| Q47325030 | MdATG18a overexpression improves tolerance to nitrogen deficiency and regulates anthocyanin accumulation through increased autophagy in transgenic apple. |
| Q55005450 | Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs. |
| Q39360011 | Nitrogen assimilation system in maize is regulated by developmental and tissue-specific mechanisms |
| Q90737020 | Proteomic and metabolomic study of wax apple (Syzygium samarangense) fruit during ripening process |
| Q58201865 | Remodels Chloroplastic Monogalactosyldiacylglycerol by Liberating α-Linolenic Acid in Arabidopsis Leaves under Heat Stress |
| Q93163368 | Transcriptional regulation of amino acid metabolism in response to nitrogen deficiency and nitrogen forms in tea plant root (Camellia sinensis L.). |
| Q47685775 | VANTED: A Tool for Integrative Visualization and Analysis of -Omics Data |
| Q47149565 | eQTLs Regulating Transcript Variations Associated with Rapid Internode Elongation in Deepwater Rice. |
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