Possible formation of mitochondrial-RNA containing chimeric or trimeric RNA implies a post-transcriptional and post-splicing mechanism for RNA fusion

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Possible formation of mitochondrial-RNA containing chimeric or trimeric RNA implies a post-transcriptional and post-splicing mechanism for RNA fusion is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2013PLoSO...877016Y
P356DOI10.1371/JOURNAL.PONE.0077016
P8608Fatcat IDrelease_7xcb4kpkojceddtckhi3juui6m
P932PMC publication ID3811998
P698PubMed publication ID24204722
P5875ResearchGate publication ID258350705

P2093author name stringWei Yang
D Joshua Liao
Emily Weiss
Gung-wei Chirn
Jian-hua Zhou
Jian-min Wu
An-ding Bi
Emily Pauline Holman
Hai-hong Shen
Yong-chang Ou-Yang
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Mitochondria: mitochondrial RNA metabolism and human diseaseQ38075376
Yeast and human mitochondrial helicasesQ38085930
Survey of 548 oncogenic fusion transcripts in thyroid tumors supports the importance of the already established thyroid fusions genesQ39282539
Splicing of mouse p53 pre-mRNA does not always follow the "first come, first served" principle and may be influenced by cisplatin treatment and serum starvationQ39323969
Expression of a novel non-coding mitochondrial RNA in human proliferating cells.Q41948688
A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmanniiQ42237742
Distinct genomic copy number in mitochondria of different mammalian organs.Q49035569
Short homologous sequences are strongly associated with the generation of chimeric RNAs in eukaryotes.Q52590911
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Nuclear miRNA regulates the mitochondrial genome in the heartQ28575994
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Pattern of organization of human mitochondrial pseudogenes in the nuclear genomeQ28768380
Nuclear insertions of mitochondrial origin: Database updating and usefulness in cancer studiesQ29031656
A novel chimeric mitochondrial RNA localized in the nucleus of mouse spermQ30942849
Overlapping genes coded in the 3'-to-5'-direction in mitochondrial genes and 3'-to-5' polymerization of non-complementary RNA by an 'invertase'.Q31096994
New methods as alternative or corrective measures for the pitfalls and artifacts of reverse transcription and polymerase chain reactions (RT-PCR) in cloning chimeric or antisense-accompanied RNAQ33953031
Mammalian NUMT insertion is non-randomQ34285894
Specificity factors in cytoplasmic polyadenylationQ34351577
Pseudogenes as weaknesses of ACTB (Actb) and GAPDH (Gapdh) used as reference genes in reverse transcription and polymerase chain reactionsQ34395392
RNA editing in mitochondrial trans-introns is required for splicingQ34534306
Mitochondrial DNA common deletion is not associated with thyroid, breast and colorectal tumors in Turkish patients.Q34562664
Systematic asymmetric nucleotide exchanges produce human mitochondrial RNAs cryptically encoding for overlapping protein coding genes.Q34589036
A novel 80 kDa human estrogen receptor containing a duplication of exons 6 and 7Q34591772
A widespread and unusual RNA trans-splicing type in dinoflagellate mitochondriaQ34599444
Complex alternative splicing of the smarca2 gene suggests the importance of smarca2-B variantsQ35142978
The human mitochondrial transcriptomeQ35178219
A quick, cost-free method of purification of DNA fragments from agarose gelQ35770093
Basic anatomy and tumor biology of the RPS6KA6 gene that encodes the p90 ribosomal S6 kinase-4.Q36188228
Cloning and characterization of a 77-kDa oestrogen receptor isolated from a human breast cancer cell lineQ36419975
Cell cycle- and ribonucleotide reductase-driven changes in mtDNA copy number influence mtDNA Inheritance without compromising mitochondrial gene expressionQ37021683
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue10
P407language of work or nameEnglishQ1860
P304page(s)e77016
P577publication date2013-10-24
P1433published inPLOS OneQ564954
P1476titlePossible formation of mitochondrial-RNA containing chimeric or trimeric RNA implies a post-transcriptional and post-splicing mechanism for RNA fusion
P478volume8

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cites work (P2860)
Q37089402Chimeric mitochondrial peptides from contiguous regular and swinger RNA.
Q46311008How long noncoding RNAs enforce their will on mitochondrial activity: regulation of mitochondrial respiration, reactive oxygen species production, apoptosis, and metabolic reprogramming in cancer
Q26820767Hypothesis: Artifacts, Including Spurious Chimeric RNAs with a Short Homologous Sequence, Caused by Consecutive Reverse Transcriptions and Endogenous Random Primers
Q90160736Interior circular RNA
Q33624325It Is Imperative to Establish a Pellucid Definition of Chimeric RNA and to Clear Up a Lot of Confusion in the Relevant Research
Q47939840Sharp switches between regular and swinger mitochondrial replication: 16S rDNA systematically exchanging nucleotides A<->T+C<->G in the mitogenome of Kamimuria wangi
Q42323429Targeting antisense mitochondrial ncRNAs inhibits murine melanoma tumor growth and metastasis through reduction in survival and invasion factors
Q41498647The mitochondrial lncRNA ASncmtRNA-2 is induced in aging and replicative senescence in Endothelial Cells
Q26865888The other side of the coin: the tumor-suppressive aspect of oncogenes and the oncogenic aspect of tumor-suppressive genes, such as those along the CCND-CDK4/6-RB axis
Q26774954To Know How a Gene Works, We Need to Redefine It First but then, More Importantly, to Let the Cell Itself Decide How to Transcribe and Process Its RNAs
Q50027000Transcriptional-Readthrough RNAs Reflect the Phenomenon of "A Gene Contains Gene(s)" or "Gene(s) within a Gene" in the Human Genome, and Thus Are Not Chimeric RNAs.
Q36009235Two RNAs or DNAs May Artificially Fuse Together at a Short Homologous Sequence (SHS) during Reverse Transcription or Polymerase Chain Reactions, and Thus Reporting an SHS-Containing Chimeric RNA Requires Extra Caution
Q28596502Unbiased Mitoproteome Analyses Confirm Non-canonical RNA, Expanded Codon Translations
Q52671014While it is not deliberate, much of today's biomedical research contains logical and technical flaws, showing a need for corrective action.

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