Mass spectrometry and glycomics

scientific article

Mass spectrometry and glycomics is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1089/OMI.2009.0146
P932PMC publication ID3133787
P698PubMed publication ID20443730
P5875ResearchGate publication ID44574376

P50authorJoseph ZaiaQ42100444
P2093author name stringJoseph Zaia
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Glycoprotein characterization combining intact protein and glycan analysis by capillary electrophoresis-electrospray ionization-mass spectrometryQ80030419
Glycosylation of sputum mucins is altered in cystic fibrosis patientsQ80057969
Graphitized carbon LC-MS characterization of the chondroitin sulfate oligosaccharides of aggrecanQ80103430
Quantitation by isobaric labeling: applications to glycomicsQ80116182
Semiautomated high-sensitivity profiling of human blood serum glycoproteins through lectin preconcentration and multidimensional chromatography/tandem mass spectrometryQ80196302
Screening of glycosylation patterns in serum using natural glycoprotein microarrays and multi-lectin fluorescence detectionQ80255724
Electron capture dissociation in a radio frequency ion trapQ80395192
A study of glycoproteins in human serum and plasma reference standards (HUPO) using multilectin affinity chromatography coupled with RPLC-MS/MSQ80955865
0,2An cross-ring cleavage as a general diagnostic tool for glycan assignment in glycoconjugate mixturesQ81121318
Analysis of N-glycans from recombinant immunoglobulin G by on-line reversed-phase high-performance liquid chromatography/mass spectrometryQ81323299
Protein glycosylation analyzed by normal-phase nano-liquid chromatography--mass spectrometry of glycopeptidesQ81337240
Sweet secret of the multicellular lifeQ82345154
Approaches to the study of N-linked glycoproteins in human plasma using lectin affinity chromatography and nano-HPLC coupled to electrospray linear ion trap--Fourier transform mass spectrometryQ82646511
Collision-induced dissociation of alkali metal cationized and permethylated oligosaccharides: Influence of the collision energy and of the collision gas for the assignment of linkage positionQ86746372
Printed covalent glycan array for ligand profiling of diverse glycan binding proteinsQ24559665
Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometryQ28204943
Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltonsQ28293769
Cycling of O-linked beta-N-acetylglucosamine on nucleocytoplasmic proteinsQ28299550
Heparan sulphate proteoglycans fine-tune mammalian physiologyQ29619329
Order out of chaos: assembly of ligand binding sites in heparan sulfateQ29620085
Stabilization and linkage analysis of metal-ligated sialic acid containing oligosaccharidesQ30662052
Post-source decay mass spectrometry: optimized calibration procedure and structural characterization of permethylated oligosaccharidesQ30679407
Profiling with structural elucidation of the neutral and anionic O-linked oligosaccharides in the egg jelly coat of Xenopus laevis by Fourier transform mass spectrometryQ30698040
Global internal standard technology for comparative proteomicsQ30731171
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Catalog-library approach for the rapid and sensitive structural elucidation of oligosaccharidesQ30773786
Size exclusion chromatography/mass spectrometry applied to the analysis of polysaccharidesQ30780064
Unusual N-glycan structures in alpha-mannosidase II/IIx double null embryos identified by a systematic glycomics approach based on two-dimensional LC mapping and matrix-dependent selective fragmentation method in MALDI-TOF/TOF mass spectrometryQ30821750
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Advances in fluorescence derivatization methods for high-performance liquid chromatographic analysis of glycoprotein carbohydratesQ36306772
Overview on advances in capillary electrophoresis-mass spectrometry of carbohydrates: a tabulated reviewQ36493459
Interactions between heparan sulfate and proteins: the concept of specificityQ36552851
Oligosaccharides from human milk as revealed by matrix-assisted laser desorption/ionization mass spectrometryQ36719233
Separation of 8-aminonaphthalene-1,3,6-trisulfonic acid-labelled neutral and sialylated N-linked complex oligosaccharides by capillary electrophoresisQ36792445
Synthesis and medical applications of oligosaccharidesQ36802338
Characterization of neutral oligosaccharide-alditols from Xenopus laevis egg jelly coats by matrix-assisted laser desorption Fourier transform mass spectrometryQ36872635
Analysis of 1-aminopyrene-3,6,8-trisulfonate-derivatized oligosaccharides by capillary electrophoresis with matrix-assisted laser desorption/ionization time-of-flight mass spectrometryQ36891995
Comparative glycomics of connective tissue glycosaminoglycansQ36958641
Evolutionary differences in glycosaminoglycan fine structure detected by quantitative glycan reductive isotope labelingQ36980992
Distinguishing glucuronic from iduronic acid in glycosaminoglycan tetrasaccharides by using electron detachment dissociation.Q36981903
Glycoform quantification of chondroitin/dermatan sulfate using a liquid chromatography-tandem mass spectrometry platformQ37002911
Profiling of human serum glycans associated with liver cancer and cirrhosis by IMS-MSQ37055406
Optimized extraction of glycosaminoglycans from normal and osteoarthritic cartilage for glycomics profilingQ37071636
Glycan arrays: biological and medical applicationsQ37079378
Differentiating N-linked glycan structural isomers in metastatic and nonmetastatic tumor cells using sequential mass spectrometryQ37120207
Concept, strategy and realization of lectin-based glycan profilingQ37129173
On-line separations combined with MS for analysis of glycosaminoglycansQ37310377
Glycomic analysis by capillary electrophoresis-mass spectrometry.Q37313381
Combined approaches to the synthesis and study of glycoproteins.Q37409456
Profiling the glycoforms of the intact alpha subunit of recombinant human chorionic gonadotropin by high-resolution capillary electrophoresis-mass spectrometryQ37438665
Enzymatic degradation of glycosaminoglycansQ38300252
Structural analysis of O-glycopeptides employing negative- and positive-ion multi-stage mass spectra obtained by collision-induced and electron-capture dissociations in linear ion trap time-of-flight mass spectrometry.Q38305073
Use of lectins in analysis of glycoconjugatesQ38312626
Compositional profiling of heparin/heparan sulfate using mass spectrometry: assay for specificity of a novel extracellular human endosulfataseQ38327693
Analysis of heparan sulfate oligosaccharides with ion pair-reverse phase capillary high performance liquid chromatography-microelectrospray ionization time-of-flight mass spectrometryQ38364175
Sequencing of O-glycopeptides derived from an S-layer glycoprotein of Geobacillus stearothermophilus NRS 2004/3a containing up to 51 monosaccharide residues at a single glycosylation site by fourier transform ion cyclotron resonance infrared multiphQ39393511
Improved hydrophilic interaction chromatography LC/MS of heparinoids using a chip with postcolumn makeup flowQ40038320
On-line LC-MS approach combining collision-induced dissociation (CID), electron-transfer dissociation (ETD), and CID of an isolated charge-reduced species for the trace-level characterization of proteins with post-translational modificationsQ40075431
Analysis of O-glycan heterogeneity in IgA1 myeloma proteins by Fourier transform ion cyclotron resonance mass spectrometry: implications for IgA nephropathy.Q40181424
Determination of aberrant O-glycosylation in the IgA1 hinge region by electron capture dissociation fourier transform-ion cyclotron resonance mass spectrometry.Q40443299
On-line sheathless capillary electrophoresis/nanoelectrospray ionization-tandem mass spectrometry for the analysis of glycosaminoglycan oligosaccharidesQ40538667
Microanalysis of N-linked oligosaccharides in a glycoprotein by capillary liquid chromatography/mass spectrometry and liquid chromatography/tandem mass spectrometryQ40655525
Carbohydrate structural isomers analyzed by sequential mass spectrometryQ41863702
Heparan sulfate separation, sequencing, and isomeric differentiation: ion mobility spectrometry reveals specific iduronic and glucuronic acid-containing hexasaccharidesQ42076709
A chip-based amide-HILIC LC/MS platform for glycosaminoglycan glycomics profilingQ42100386
The fine structure of Caenorhabditis elegans N-glycansQ30859339
Detailed glycan analysis of serum glycoproteins of patients with congenital disorders of glycosylation indicates the specific defective glycan processing step and provides an insight into pathogenesisQ30939285
Negative ion mass spectrometry of sialylated carbohydrates: discrimination of N-acetylneuraminic acid linkages by MALDI-TOF and ESI-TOF mass spectrometryQ30952622
Combined electron capture and infrared multiphoton dissociation for multistage MS/MS in a Fourier transform ion cyclotron resonance mass spectrometer.Q30980969
Characterization of the O antigen gene cluster and structural analysis of the O antigen of Francisella tularensis subsp. tularensisQ30981732
Proteomics of glycoproteins based on affinity selection of glycopeptides from tryptic digestsQ30984515
Congruent strategies for carbohydrate sequencing. 3. OSCAR: an algorithm for assigning oligosaccharide topology from MSn dataQ31007941
A high pressure matrix-assisted laser desorption/ionization Fourier transform mass spectrometry ion source for thermal stabilization of labile biomolecules.Q31010787
Comparative proteomics of glycoproteins based on lectin selection and isotope codingQ31034079
Strategy for profiling and structure elucidation of mucin-type oligosaccharides by mass spectrometryQ31120513
Hydrophilic affinity isolation and MALDI multiple-stage tandem mass spectrometry of glycopeptides for glycoproteomicsQ31126901
Characterization of gel-separated glycoproteins using two-step proteolytic digestion combined with sequential microcolumns and mass spectrometryQ31131709
Analysis of a bioactive beta-(1 --> 3) polysaccharide (Curdlan) using matrix-assisted laser desorption/ionization time-of-flight mass spectrometryQ31140688
Analysis of MALDI-TOF mass spectrometry data for discovery of peptide and glycan biomarkers of hepatocellular carcinomaQ31142572
Separation of sodiated isobaric disaccharides and trisaccharides using electrospray ionization-atmospheric pressure ion mobility-time of flight mass spectrometry.Q31165937
Negative-ion electrospray mass spectrometry of neutral underivatized oligosaccharidesQ32058439
Determination of twelve heparin- and heparan sulfate-derived disaccharides as 2-aminoacridone derivatives by capillary zone electrophoresis using ultraviolet and laser-induced fluorescence detection.Q32099779
Determination of N-glycosylation sites and site heterogeneity in glycoproteinsQ33196610
srf-3, a mutant of Caenorhabditis elegans, resistant to bacterial infection and to biofilm binding, is deficient in glycoconjugatesQ33207429
Profiling the morphological distribution of O-linked oligosaccharidesQ33207618
Comparison by LC-MS and MALDI-MS of prostate-specific antigen from five commercial sources with certified reference material 613.Q33210739
Congruent strategies for carbohydrate sequencing. 1. Mining structural details by MSnQ33224229
Congruent strategies for carbohydrate sequencing. 2. FragLib: an MSn spectral libraryQ33224230
Solid-phase permethylation of glycans for mass spectrometric analysisQ33226041
Convenient and rapid analysis of linkage isomers of fucose-containing oligosaccharides by matrix-assisted laser desorption/ionization quadrupole ion trap time-of-flight mass spectrometryQ33227939
Analysis of native milk oligosaccharides directly from thin-layer chromatography plates by matrix-assisted laser desorption/ionization orthogonal-time-of-flight mass spectrometry with a glycerol matrixQ33231612
Selective isolation of glycoproteins and glycopeptides for MALDI-TOF MS detection supported by magnetic particles.Q33235741
Differentiating structural isomers of sialylated glycans by matrix-assisted laser desorption/ionization time-of-flight/time-of-flight tandem mass spectrometryQ33237440
Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: An update covering the period 1999-2000.Q33241331
Capillary electrophoresis-mass spectrometry as a characterization tool for therapeutic proteinsQ33244121
Isomer and glycomer complexities of core GlcNAcs in Caenorhabditis elegansQ33246570
Miniaturized separation techniques in glycomic investigationsQ33247136
A serum glycomics approach to breast cancer biomarkersQ33250468
New insights into the glycosylation of the surface layer protein SgsE from Geobacillus stearothermophilus NRS 2004/3aQ33256963
Structure elucidation of glycosphingolipids and gangliosides using high-performance tandem mass spectrometryQ58011188
A sweet synthesisQ59031219
Negative ion graphitised carbon nano-liquid chromatography/mass spectrometry increases sensitivity for glycoprotein oligosaccharide analysisQ59212393
Collisional-activation tandem mass spectrometry of sodium adduct ions of methylated oligosaccharides: sequence analysis and discrimination between alpha-NeuAc-(2----3) and alpha-NeuAc-(2----6) linkagesQ67889816
Structures of the sugar chains of interferon-gamma produced by human myelomonocyte cell line HBL-38Q69220575
Electrospray interface for liquid chromatographs and mass spectrometersQ69383241
Fractionation of asparagine-linked oligosaccharides by serial lectin-Agarose affinity chromatography. A rapid, sensitive, and specific techniqueQ70453909
Analysis of pyridylaminated O-linked sugar chains by two-dimensional sugar mappingQ71492837
A rapid high-resolution high-performance liquid chromatographic method for separating glycan mixtures and analyzing oligosaccharide profilesQ71543377
Electrospray mass spectrometry and fragmentation of N-linked carbohydrates derivatized at the reducing terminusQ73028274
Characterization of derivatization of sialic acid with 2-aminoacridone and determination of sialic acid content in glycoproteins by capillary electrophoresis and high performance liquid chromatography--ion trap mass spectrometryQ73145536
Collision-induced fragmentation of underivatized N-linked carbohydrates ionized by electrosprayQ73279650
Structural analysis of permethylated oligosaccharides by electrospray tandem mass spectrometryQ73626156
Complete characterization of posttranslational modification sites in the bovine milk protein PP3 by tandem mass spectrometry with electron capture dissociation as the last stageQ73810162
Structural characterization of carbohydrate sequence, linkage, and branching in a quadrupole Ion trap mass spectrometer: neutral oligosaccharides and N-linked glycansQ74822927
Normal-phase nanoscale liquid chromatography-mass spectrometry of underivatized oligosaccharides at low-femtomole sensitivityQ75360738
Structural assignment of disialylated biantennary N-glycan isomers derivatized with 2-aminopyridine using negative-ion multistage tandem mass spectral matchingQ79435584
Fucose-containing oligosaccharides from human milk from a donor of blood group 0 Le(a) nonsecretorQ42214766
Structural analysis of bikunin glycosaminoglycanQ42760276
Sugar-assisted glycopeptide ligation with complex oligosaccharides: scope and limitationsQ43247324
A tandem mass spectrometric approach to determination of chondroitin/dermatan sulfate oligosaccharide glycoforms.Q43247439
Investigation of different combinations of derivatization, separation methods and electrospray ionization mass spectrometry for standard oligosaccharides and glycans from ovalbuminQ43629720
Electron capture dissociation and infrared multiphoton dissociation MS/MS of an N-glycosylated tryptic peptic to yield complementary sequence informationQ43749887
Tandem mass spectrometric determination of the 4S/6S sulfation sequence in chondroitin sulfate oligosaccharidesQ43854785
Capillary electrophoresis/electrospray ion trap mass spectrometry for the analysis of negatively charged derivatized and underivatized glycansQ43861890
An analytical and structural database provides a strategy for sequencing O-glycans from microgram quantities of glycoproteinsQ43968451
Branching pattern and sequence analysis of underivatized oligosaccharides by combined MS/MS of singly and doubly charged molecular ions in negative-ion electrospray mass spectrometryQ44022138
Pathogen specific carbohydrate antigen microarrays: a chip for detection of Salmonella O-antigen specific antibodiesQ44037007
Influence of charge state on product ion mass spectra and the determination of 4S/6S sulfation sequence of chondroitin sulfate oligosaccharidesQ44099646
Sequencing of tri- and tetraantennary N-glycans containing sialic acid by negative mode ESI QTOF tandem MS.Q44152434
Structural characterization of chondroitin/dermatan sulfate oligosaccharides from bovine aorta by capillary electrophoresis and electrospray ionization quadrupole time-of-flight tandem mass spectrometryQ44187974
Structural analysis of underivatized neutral human milk oligosaccharides in the negative ion mode by nano-electrospray MS(n) (part 1: methodology).Q44223347
Structural analysis of underivatized neutral human milk oligosaccharides in the negative ion mode by nano-electrospray MS(n) (part 2: application to isomeric mixtures).Q44223350
Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins.Q44446020
Reversed-phase ion-pairing liquid chromatography/ion trap mass spectrometry for the analysis of negatively charged, derivatized glycansQ44502998
Liquid Chromatography/Mass Spectrometry Sequencing Approach for Highly Sulfated Heparin-derived OligosaccharidesQ44650509
Elimination of oxidative degradation during the per-O-methylation of carbohydratesQ44704240
A new computer program (GlycoX) to determine simultaneously the glycosylation sites and oligosaccharide heterogeneity of glycoproteins.Q45971253
Compositional analysis and quantification of heparin and heparan sulfate by electrospray ionization ion trap mass spectrometryQ46079889
Glycoprofiling of bifidobacterial consumption of human milk oligosaccharides demonstrates strain specific, preferential consumption of small chain glycans secreted in early human lactationQ46196093
Variability, heritability and environmental determinants of human plasma N-glycomeQ46227174
Detection and quantification of the sulfated disaccharides in chondroitin sulfate by electrospray tandem mass spectrometryQ46231117
Capillary electrophoresis-electrospray ionization mass spectrometry for rapid and sensitive N-glycan analysis of glycoproteins as 9-fluorenylmethyl derivativesQ46291586
Isotope tag method for quantitative analysis of carbohydrates by liquid chromatography-mass spectrometryQ46448926
Fragmentation of negative ions from carbohydrates: part 1. Use of nitrate and other anionic adducts for the production of negative ion electrospray spectra from N-linked carbohydratesQ46464770
Fragmentation of negative ions from carbohydrates: part 2. Fragmentation of high-mannose N-linked glycansQ46464775
Fragmentation of negative ions from carbohydrates: part 3. Fragmentation of hybrid and complex N-linked glycansQ46464780
Nanoliquid chromatography-mass spectrometry of oligosaccharides employing graphitized carbon chromatography on microchip with a high-accuracy mass analyzer.Q46470245
Daily variations in oligosaccharides of human milk determined by microfluidic chips and mass spectrometryQ46640821
Evidence of block and randomly sequenced chondroitin polysaccharides: sequential enzymatic digestion and quantification using ion trap tandem mass spectrometryQ46697110
Automated N-glycopeptide identification using a combination of single- and tandem-MS.Q46759771
Comparative glycoproteomics of N-linked complex-type glycoforms containing sialic acid in human serumQ46802009
Collisionally activated dissociation and electron capture dissociation provide complementary structural information for branched permethylated oligosaccharidesQ46863116
Structural assignment of isomeric 2-aminopyridine-derivatized monosialylated biantennary N-linked oligosaccharides using negative-ion multistage tandem mass spectral matchingQ46870665
Glycosylation profiling of immunoglobulin G (IgG) subclasses from human serumQ46906327
Complementary structural information of positive- and negative-ion MSn spectra of glycopeptides with neutral and sialylated N-glycansQ46926428
Electron detachment dissociation of neutral and sialylated oligosaccharides.Q46930733
Infrared multiphoton dissociation and electron capture dissociation of high-mannose type glycopeptidesQ46972111
Tools for glycoproteomic analysis: size exclusion chromatography facilitates identification of tryptic glycopeptides with N-linked glycosylation sitesQ46972135
On-line size-exclusion chromatography/mass spectrometry of low molecular mass heparinQ47401545
Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site-specific stable isotope tagging.Q51032344
Quantification of isomers from a mixture of twelve heparin and heparan sulfate disaccharides using tandem mass spectrometry.Q51365597
Characterization of sulfated oligosaccharides in mucopolysaccharidosis type IIIA by electrospray ionization mass spectrometry.Q51806339
Structural analysis of a glycoprotein by liquid chromatography-mass spectrometry and liquid chromatography with tandem mass spectrometry. Application to recombinant human thrombomodulin.Q51841255
N-glycosylation site occupancy in serum glycoproteins using multiple reaction monitoring liquid chromatography-mass spectrometry.Q54184910
Combination of abundant protein depletion and multi-lectin affinity chromatography (M-LAC) for plasma protein biomarker discovery.Q54439434
O-Glycan Analysis of Natural Human Neutrophil Gelatinase B Using a Combination of Normal Phase- HPLC and Online Tandem Mass Spectrometry: Implications for the Domain Organization of the Enzyme†Q57584564
Tandem mass spectrometric strategies for determination of sulfation positions and uronic acid epimerization in chondroitin sulfate oligosaccharidesQ58011073
A strategy for annotating the human milk glycomeQ33258460
Comparison of the methods for profiling glycoprotein glycans--HUPO Human Disease Glycomics/Proteome Initiative multi-institutional studyQ33269243
Development of an apparatus for rapid release of oligosaccharides at the glycosaminoglycan-protein linkage region in chondroitin sulfate-type proteoglycansQ33270237
Dynamic developmental elaboration of N-linked glycan complexity in the Drosophila melanogaster embryoQ33270987
A potential pitfall in 18O-based N-linked glycosylation site mappingQ33272107
Tools for glycomics: relative quantitation of glycans by isotopic permethylation using 13CH3I.Q33279916
Rapid resolution of carbohydrate isomers by electrospray ionization ambient pressure ion mobility spectrometry-time-of-flight mass spectrometry (ESI-APIMS-TOFMS).Q33285961
Mass + retention time = structure: a strategy for the analysis of N-glycans by carbon LC-ESI-MS and its application to fibrin N-glycansQ33286305
Matrix assisted laser desorption ionization-time of flight mass spectrometry analysis of hyaluronan oligosaccharidesQ33286461
Comparative glycomic mapping through quantitative permethylation and stable-isotope labelingQ33290808
Rapid and sensitive analysis of mucin-type glycans using an in-line flow glycan-releasing apparatusQ33290885
A glycomics platform for the analysis of permethylated oligosaccharide alditolsQ33295096
Method for profiling mucin oligosaccharides from gastric biopsies of rhesus monkeys with and without Helicobacter pylori infectionQ33301705
Comprehensive approach to structural and functional glycomics based on chemoselective glycoblotting and sequential tag conversionQ33315438
Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update covering the period 2001-2002.Q33318034
Characterization of heparin oligosaccharides binding specifically to antithrombin III using mass spectrometryQ33318943
Structural and quantitative analysis of N-linked glycans by matrix-assisted laser desorption ionization and negative ion nanospray mass spectrometryQ33320914
Automated normal phase nano high performance liquid chromatography/matrix assisted laser desorption/ionization mass spectrometry for analysis of neutral and acidic glycosphingolipidsQ33323055
Factors that influence fragmentation behavior of N-linked glycopeptide ions.Q33325314
On-line CE-LIF-MS technology for the direct characterization of N-linked glycans from therapeutic antibodiesQ33329644
Recapitulation of IVIG anti-inflammatory activity with a recombinant IgG Fc.Q33379309
Mass analysis of mobility-selected ion populations using dual gate, ion mobility, quadrupole ion trap mass spectrometryQ33433990
High-sensitivity and high-resolution methods for glycoprotein analysisQ33993480
Oligosaccharides in human milk: structural, functional, and metabolic aspectsQ34001527
Nano-electrospray ionization mass spectrometry: addressing analytical problems beyond routineQ34166549
Solid-phase extraction of N-linked glycopeptidesQ34271181
Mass spectrometry of oligosaccharides.Q34299101
Complementary structural information from a tryptic N-linked glycopeptide via electron transfer ion/ion reactions and collision-induced dissociation.Q34311807
Oligosaccharide microarrays to decipher the glyco codeQ34330902
The sweet and sour of cancer: glycans as novel therapeutic targetsQ34439560
Nothing in glycobiology makes sense, except in the light of evolutionQ34564390
Separation technologies for glycomics.Q34642346
Combining lectin microcolumns with high-resolution separation techniques for enrichment of glycoproteins and glycopeptidesQ34651702
P433issue4
P304page(s)401-418
P577publication date2010-08-01
P1433published inOMICS A Journal of Integrative BiologyQ15753054
P1476titleMass spectrometry and glycomics
P478volume14

Reverse relations

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Q26866630Recent advances in sialic acid-focused glycomics
Q37297209Recent trends in analytical and structural glycobiology
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