A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon

scientific article published on November 1997

A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/JB.179.21.6729-6735.1997
P8608Fatcat IDrelease_knais3tyvbh7fo2txtqrz3tpku
P932PMC publication ID179602
P698PubMed publication ID9352923

P2093author name stringA M Chakrabarty
S M McFall
B Abraham
C G Narsolis
P2860cites workGenetic analysis of a Pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradationQ28261042
Isolation and characterization of catabolite repression control mutants of Pseudomonas aeruginosa PAOQ28492532
Fumarase C activity is elevated in response to iron deprivation and in mucoid, alginate-producing Pseudomonas aeruginosa: cloning and characterization of fumC and purification of native fumCQ28492939
The algT (algU) gene of Pseudomonas aeruginosa, a key regulator involved in alginate biosynthesis, encodes an alternative sigma factor (sigma E)Q28492957
Activation of the catBCA promoter: probing the interaction of CatR and RNA polymerase through in vitro transcriptionQ29346850
Genetic control of enzyme induction in the -ketoadipate pathway of Pseudomonas putida: deletion mapping of cat mutationsQ33779143
Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradationQ34634784
Acetate utilization is inhibited by benzoate in Alcaligenes eutrophus: evidence for transcriptional control of the expression of acoE coding for acetyl coenzyme A synthetase.Q35596518
Repression of 4-hydroxybenzoate transport and degradation by benzoate: a new layer of regulatory control in the Pseudomonas putida beta-ketoadipate pathwayQ35599681
The nucleotide sequence of the Pseudomonas aeruginosa pyrE-crc-rph region and the purification of the crc gene productQ35613884
Novel nuclear magnetic resonance spectroscopy methods demonstrate preferential carbon source utilization by Acinetobacter calcoaceticusQ35617461
2-chloromuconate and ClcR-mediated activation of the clcABD operon: in vitro transcriptional and DNase I footprint analysesQ35623973
Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD chlorocatechol operon in Pseudomonas putidaQ35966343
Purification of the LysR family regulator, ClcR, and its interaction with the Pseudomonas putida clcABD chlorocatechol operon promoterQ35974923
Interaction of two LysR-type regulatory proteins CatR and ClcR with heterologous promoters: functional and evolutionary implicationsQ35980587
Inducibility of the TOL catabolic pathway in Pseudomonas putida (pWW0) growing on succinate in continuous culture: evidence of carbon catabolite repression controlQ36106809
Fumarate or a fumarate metabolite restores switching ability to rotating flagella of bacterial envelopesQ36109971
Roles of CatR and cis,cis-muconate in activation of the catBC operon, which is involved in benzoate degradation in Pseudomonas putidaQ36136904
The cysP promoter of Salmonella typhimurium: characterization of two binding sites for CysB protein, studies of in vivo transcription initiation, and demonstration of the anti-inducer effects of thiosulfateQ36154056
In vitro interactions of CysB protein with the cysJIH promoter of Salmonella typhimurium: inhibitory effects of sulfide.Q36158015
Nucleotide sequencing and characterization of Pseudomonas putida catR: a positive regulator of the catBC operon is a member of the LysR familyQ36158196
Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4Q36161998
Abundant expression of Pseudomonas genes for chlorocatechol metabolismQ36203438
Cloning and complete nucleotide sequence determination of the catB gene encoding cis,cis-muconate lactonizing enzymeQ36468533
Genes specifying degradation of 3-chlorobenzoic acid in plasmids pAC27 and pJP4.Q37680311
Microbial degradation of haloaromaticsQ39548234
Carbon catabolite repression of phenol degradation in Pseudomonas putida is mediated by the inhibition of the activator protein PhlR.Q39840873
The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4)Q39843605
Phosphorylation-independent bacterial chemoresponses correlate with changes in the cytoplasmic level of fumarateQ39843636
Regulation of the pcaIJ genes for aromatic acid degradation in Pseudomonas putidaQ39936931
Characterization of the Pseudomonas sp. strain P51 gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory regionQ39941940
Construction of broad-host-range plasmid vectors for easy visible selection and analysis of promotersQ39946175
The beta-ketoadipate pathway and the biology of self-identityQ41199628
Genetic and molecular analysis of a regulatory region of the herbicide 2,4-dichlorophenoxyacetate catabolic plasmid pJP4.Q46319795
Vectors with restriction site banks. V. pJRD215, a wide-host-range cosmid vector with multiple cloning sitesQ48353008
Toxicity of chlorobenzene on Pseudomonas sp. strain RHO1, a chlorobenzene-degrading strain.Q54309681
DNase I footprinting, DNA bending and in vitro transcription analyses of ClcR and CatR interactions with the clcABD promoter: evidence of a conserved transcriptional activation mechanism.Q54564785
Microbial degradation of synthetic recalcitrant compoundsQ79143379
P433issue21
P407language of work or nameEnglishQ1860
P304page(s)6729-6735
P577publication date1997-11-01
P1433published inJournal of BacteriologyQ478419
P1476titleA tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon
P478volume179

Reverse relations

cites work (P2860)
Q60015928Adaptative Potential of Alkaliphilic Bacteria towards Chloroaromatic Substrates Assessed by agfp-tagged 2,4-D Degradation Plasmid
Q35880920Bacterial transcriptional regulators for degradation pathways of aromatic compounds
Q37735901Carbon catabolite repression in Pseudomonas : optimizing metabolic versatility and interactions with the environment.
Q39568021Carbon-source-dependent expression of the PalkB promoter from the Pseudomonas oleovorans alkane degradation pathway.
Q41876086Dual role of response regulator StyR in styrene catabolism regulation
Q33538615Expression systems and physiological control of promoter activity in bacteria
Q39640736Fumarate-mediated inhibition of erythrose reductase, a key enzyme for erythritol production by Torula corallina
Q39679593Genetic and biochemical characterization of a 2,4,6-trichlorophenol degradation pathway in Ralstonia eutropha JMP134.
Q39679675Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway
Q35594592Integrated regulation in response to aromatic compounds: from signal sensing to attractive behaviour
Q39694558Integration of global regulation of two aromatic-responsive sigma(54)-dependent systems: a common phenotype by different mechanisms.
Q33358902Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacterium Cupriavidus necator JMP134.
Q30234900Metabolomics for biomarker discovery in the diagnosis, prognosis, survival and recurrence of colorectal cancer: a systematic review
Q42705903Modulation of glucose transport causes preferential utilization of aromatic compounds in Pseudomonas putida CSV86
Q42736277Preferential utilization of aromatic compounds over glucose by Pseudomonas putida CSV86
Q36026783Promoters in the environment: transcriptional regulation in its natural context
Q39751789Real-time reverse transcription-PCR analysis of expression of halobenzoate and salicylate catabolism-associated operons in two strains of Pseudomonas aeruginosa
Q39529668Role of the crc gene in catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway.
Q33991407The PalkBFGHJKL promoter is under carbon catabolite repression control in Pseudomonas oleovorans but not in Escherichia coli alk+ recombinants
Q34166888The black cat/white cat principle of signal integration in bacterial promoters
Q34709596The quantity and quality of dissolved organic matter as supplementary carbon source impacts the pesticide-degrading activity of a triple-species bacterial biofilm
Q51295355The role of exogenous electron donors for accelerating 2,4,6-trichlorophenol biotransformation and mineralization.
Q40211222TouR-mediated effector-independent growth phase-dependent activation of the sigma54 Ptou promoter of Pseudomonas stutzeri OX1.
Q77702945Transcriptional activation of the catechol and chlorocatechol operons: variations on a theme
Q33993090Transcriptional activation of the chlorocatechol degradative genes of Ralstonia eutropha NH9.
Q34768150Transcriptional cross-regulation of the catechol and protocatechuate branches of the beta-ketoadipate pathway contributes to carbon source-dependent expression of the Acinetobacter sp. strain ADP1 pobA gene.
Q38667344Transcriptional modulation of transport and metabolism associated gene clusters leading to utilization of benzoate in preference to glucose in Pseudomonas putida CSV86.
Q46102243Variovorax sp.-mediated biodegradation of the phenyl urea herbicide linuron at micropollutant concentrations and effects of natural dissolved organic matter as supplementary carbon source

Search more.