scholarly article | Q13442814 |
review article | Q7318358 |
P50 | author | Ildefonso Cases | Q30513689 |
Victor de Lorenzo | Q30513692 | ||
P2860 | cites work | Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS | Q22122392 |
Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteria | Q24634652 | ||
Vfr controls quorum sensing in Pseudomonas aeruginosa | Q28493195 | ||
Prokaryotic enhancer-binding proteins reflect eukaryote-like modularity: the puzzle of nitrogen regulatory protein C | Q33367449 | ||
Expression systems and physiological control of promoter activity in bacteria | Q33538615 | ||
Active recruitment of sigma54-RNA polymerase to the Pu promoter of Pseudomonas putida: role of IHF and alphaCTD. | Q33889426 | ||
Characterization and role of tbuX in utilization of toluene by Ralstonia pickettii PKO1 | Q33889682 | ||
Evolution of a metabolic pathway for degradation of a toxic xenobiotic: the patchwork approach | Q33904333 | ||
The PalkBFGHJKL promoter is under carbon catabolite repression control in Pseudomonas oleovorans but not in Escherichia coli alk+ recombinants | Q33991407 | ||
Integration host factor suppresses promiscuous activation of the sigma 54-dependent promoter Pu of Pseudomonas putida | Q34042512 | ||
Bacterial promoters triggering biodegradation of aromatic pollutants | Q34056578 | ||
Repression of phenol catabolism by organic acids in Ralstonia eutropha. | Q34070545 | ||
Possible regulatory role for nonaromatic carbon sources in styrene degradation by Pseudomonas putida CA-3. | Q35182988 | ||
Use of starvation promoters to limit growth and selectively enrich expression of trichloroethylene- and phenol-transforming activity in recombinant Escherichia coli [corrected] | Q35185692 | ||
Catabolite repression of the toluene degradation pathway in Pseudomonas putida harboring pWW0 under various conditions of nutrient limitation in chemostat culture. | Q35188793 | ||
A protein-induced DNA bend increases the specificity of a prokaryotic enhancer-binding protein | Q35194414 | ||
Benzoate degradation via the ortho pathway in Alcaligenes eutrophus is perturbed by succinate | Q35203026 | ||
Cross-regulation of toluene monooxygenases by the transcriptional activators TbmR and TbuT. | Q35205036 | ||
Acetate utilization is inhibited by benzoate in Alcaligenes eutrophus: evidence for transcriptional control of the expression of acoE coding for acetyl coenzyme A synthetase. | Q35596518 | ||
Structure and function of the Pseudomonas putida integration host factor | Q35615738 | ||
A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon | Q35631881 | ||
Molecular mechanisms of genetic adaptation to xenobiotic compounds | Q35655423 | ||
Cross-regulation by XylR and DmpR activators of Pseudomonas putida suggests that transcriptional control of biodegradative operons evolves independently of catabolic genes | Q35968328 | ||
Cross talk between catabolic pathways in Pseudomonas putida: XylS-dependent and -independent activation of the TOL meta operon requires the same cis-acting sequences within the Pm promoter | Q35975018 | ||
Interaction of two LysR-type regulatory proteins CatR and ClcR with heterologous promoters: functional and evolutionary implications | Q35980587 | ||
Carbon source-dependent inhibition of xyl operon expression of the Pseudomonas putida TOL plasmid | Q36106118 | ||
Inducibility of the TOL catabolic pathway in Pseudomonas putida (pWW0) growing on succinate in continuous culture: evidence of carbon catabolite repression control | Q36106809 | ||
The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains | Q36122459 | ||
Early and late responses of TOL promoters to pathway inducers: identification of postexponential promoters in Pseudomonas putida with lacZ-tet bicistronic reporters | Q36123375 | ||
The XylS-dependent Pm promoter is transcribed in vivo by RNA polymerase with sigma32 or sigma38 depending on the growth phase | Q57340438 | ||
Involvement of the FtsH (HflB) protease in the activity of sigma54 promoters | Q57936199 | ||
Effector Specificity Mutants of the Transcriptional Activator NahR of Naphthalene DegradingPseudomonasDefine Protein Sites Involved in Binding of Aromatic Inducers | Q57936252 | ||
ATP Binding to the σ54-Dependent Activator XylRTriggers a Protein Multimerization Cycle Catalyzed by UAS DNA | Q57936261 | ||
In Vitro Activities of an N-terminal Truncated Form of XylR, a σ54-dependent Transcriptional Activator of Pseudomonas putida | Q57936271 | ||
Role of sigmas in transcription from the positively controlled Pm promoter of the TOL plasmid of Pseudomonas putida | Q61919951 | ||
The xylABC promoter from the Pseudomonas putida TOL plasmid is activated by nitrogen regulatory genes in Escherichia coli | Q68879726 | ||
Differential DNA bending introduced by the Pseudomonas putida LysR‐type regulator, CatR, at the plasmid‐borne pheBA and chromosomal catBC promoters | Q71834307 | ||
The induction and repression of benzene and catechol oxidizing capacity of Pseudomonas putida ML2 studied in perturbed chemostat culture | Q72188436 | ||
The use of elements of the E. coli Ntr-system for the design of an optimized recombinant expression system for high cell density cultivations | Q73162180 | ||
Catabolism of D-glucose by Pseudomonas putida U occurs via extracellular transformation into D-gluconic acid and induction of a specific gluconate transport system | Q73380247 | ||
Two roles for integration host factor at an enhancer-dependent nifA promoter | Q73486783 | ||
A positive feedback mechanism controls expression of AlkS, the transcriptional regulator of the Pseudomonas oleovorans alkane degradation pathway | Q73486788 | ||
The alarmone (p)ppGpp mediates physiological-responsive control at the sigma 54-dependent Po promoter | Q74649171 | ||
Transcriptional activation of the catechol and chlorocatechol operons: variations on a theme | Q77702945 | ||
Bacteria designed for bioremediation | Q77735701 | ||
Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway | Q36184658 | ||
Growth-phase-dependent expression of the Pseudomonas putida TOL plasmid pWW0 catabolic genes | Q36190843 | ||
Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150 | Q36574440 | ||
Ethylbenzene degradation by Pseudomonas fluorescens strain CA-4. | Q36731063 | ||
Altered effector specificities in regulators of gene expression: TOL plasmid xylS mutants and their use to engineer expansion of the range of aromatics degraded by bacteria | Q37406839 | ||
Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon | Q37418572 | ||
Expression of the genes coding for the Escherichia coli integration host factor are controlled by growth phase, rpoS, ppGpp and by autoregulation | Q38302081 | ||
Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707. | Q38310463 | ||
A GntR-like negative regulator of the biphenyl degradation genes of the transposon Tn4371. | Q38316702 | ||
Physiological analysis of the expression of the styrene degradation gene cluster in Pseudomonas fluorescens ST. | Q39485622 | ||
Role of the alternative sigma factor sigmaS in expression of the AlkS regulator of the Pseudomonas oleovorans alkane degradation pathway | Q39494646 | ||
HbpR, a new member of the XylR/DmpR subclass within the NtrC family of bacterial transcriptional activators, regulates expression of 2-hydroxybiphenyl metabolism in Pseudomonas azelaica HBP1. | Q39498570 | ||
Genetic evidence of distinct physiological regulation mechanisms in the sigma(54) Pu promoter of Pseudomonas putida | Q39499005 | ||
Carbon-source-dependent expression of the PalkB promoter from the Pseudomonas oleovorans alkane degradation pathway. | Q39568021 | ||
In vivo and in vitro effects of (p)ppGpp on the sigma(54) promoter Pu of the TOL plasmid of Pseudomonas putida. | Q39587573 | ||
Carbon catabolite repression of phenol degradation in Pseudomonas putida is mediated by the inhibition of the activator protein PhlR. | Q39840873 | ||
The tfdR gene product can successfully take over the role of the insertion element-inactivated TfdT protein as a transcriptional activator of the tfdCDEF gene cluster, which encodes chlorocatechol degradation in Ralstonia eutropha JMP134(pJP4) | Q39843605 | ||
Heat shock regulation of sigmaS turnover: a role for DnaK and relationship between stress responses mediated by sigmaS and sigma32 in Escherichia coli | Q39844060 | ||
Coactivation in vitro of the sigma54-dependent promoter Pu of the TOL plasmid of Pseudomonas putida by HU and the mammalian HMG-1 protein | Q39845418 | ||
Optical biosensor for environmental on-line monitoring of naphthalene and salicylate bioavailability with an immobilized bioluminescent catabolic reporter bacterium | Q39914793 | ||
Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators | Q39925462 | ||
Influence of readily metabolizable carbon on pentachlorophenol metabolism by a pentachlorophenol-degrading Flavobacterium sp. | Q39926967 | ||
Sensing of aromatic compounds by the DmpR transcriptional activator of phenol-catabolizing Pseudomonas sp. strain CF600 | Q39930931 | ||
Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWW0 of Pseudomonas putida for metabolism of aromatics | Q39931654 | ||
Genetics of alkane oxidation by Pseudomonas oleovorans | Q40397924 | ||
Designing microbial systems for gene expression in the field | Q40535117 | ||
Genetics and biochemistry of phenol degradation by Pseudomonas sp. CF600. | Q40535888 | ||
Designing microorganisms for the treatment of toxic wastes | Q40572977 | ||
In a class of its own--the RNA polymerase sigma factor sigma 54 (sigma N). | Q40637041 | ||
Transcriptional regulation by cAMP and its receptor protein | Q40856827 | ||
Regulatory noise in prokaryotic promoters: how bacteria learn to respond to novel environmental signals | Q41055434 | ||
Signal sensing by sigma 54-dependent regulators: derepression as a control mechanism | Q41130496 | ||
Cyclic AMP-independent catabolite repression in bacteria | Q41346773 | ||
Catabolite repression control in the Pseudomonads | Q41401479 | ||
Origins, acquisition and dissemination of antibiotic resistance determinants. | Q41504125 | ||
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators | Q41620651 | ||
Clues and consequences of DNA bending in transcription | Q41620688 | ||
Improving lycopene production in Escherichia coli by engineering metabolic control | Q41734961 | ||
Degradation of pentachlorophenol by a Flavobacterium species grown in continuous culture under various nutrient limitations. | Q42217474 | ||
The IIANtr (PtsN) protein of Pseudomonas putida mediates the C source inhibition of the sigma54-dependent Pu promoter of the TOL plasmid | Q42602104 | ||
Novel proteins of the phosphotransferase system encoded within the rpoN operon of Escherichia coli. Enzyme IIANtr affects growth on organic nitrogen and the conditional lethality of an erats mutant | Q42690986 | ||
sigma54-dependent transcription of the Pseudomonas putida xylS operon is influenced by the IIANtr protein of the phosphotransferase system in Escherichia coli | Q46340208 | ||
The rpoS gene regulates OP2, an operon for the lower pathway of xylene catabolism on the TOL plasmid, and the stress response in Pseudomonas putida mt-2. | Q52531848 | ||
The role of the interdomain B linker in the activation of the XylR protein of Pseudomonas putida. | Q52541484 | ||
Recruitment of RNA polymerase is a rate-limiting step for the activation of the sigma(54) promoter Pu of Pseudomonas putida. | Q53922256 | ||
Involvement of sigma 54 in exponential silencing of the Pseudomonas putida TOL plasmid Pu promoter. | Q54596802 | ||
P433 | issue | 1-2 | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | 1-11 | |
P577 | publication date | 2001-01-01 | |
P1433 | published in | The EMBO Journal | Q1278554 |
P1476 | title | The black cat/white cat principle of signal integration in bacterial promoters | |
P478 | volume | 20 |
Q31027143 | A la carte transcriptional regulators: unlocking responses of the prokaryotic enhancer-binding protein XylR to non-natural effectors |
Q28216635 | A spectrum of mutations in SH2D1A that causes X-linked lymphoproliferative disease and other Epstein-Barr virus-associated illnesses |
Q60544979 | A vesicle transport system inside chloroplasts |
Q34441683 | Aerobic biodegradation of 2,4-Dinitroanisole by Nocardioides sp. strain JS1661. |
Q28755251 | Anaerobic catabolism of aromatic compounds: a genetic and genomic view. |
Q34338562 | Assembly of the phagocyte NADPH oxidase |
Q37831987 | Atrazine biodegradation in the lab and in the field: enzymatic activities and gene regulation |
Q39018148 | Bacterial Biosensors for Measuring Availability of Environmental Pollutants |
Q35880920 | Bacterial transcriptional regulators for degradation pathways of aromatic compounds |
Q33290603 | Biological heterogeneity of the peptide-binding motif of the 70-kDa heat shock protein by surface plasmon resonance analysis |
Q42122224 | Characterization of novel carbazole catabolism genes from gram-positive carbazole degrader Nocardioides aromaticivorans IC177. |
Q41838451 | Cleaning up behind us. The potential of genetically modified bacteria to break down toxic pollutants in the environment |
Q39657832 | Cloning and characterization of SmeT, a repressor of the Stenotrophomonas maltophilia multidrug efflux pump SmeDEF. |
Q33554485 | Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli |
Q43967340 | Deciphering the action of aromatic effectors on the prokaryotic enhancer-binding protein XylR: a structural model of its N-terminal domain. |
Q35047488 | Deciphering the genome repertoire of Pseudomonas sp. M1 toward β-myrcene biotransformation |
Q43264411 | Degradation of nitroaromatic compounds: a model to study evolution of metabolic pathways |
Q34325316 | Determining centromere identity: cyclical stories and forking paths. |
Q46925583 | Differentiation of carbazole catabolic operons by replacement of the regulated promoter via transposition of an insertion sequence |
Q37356800 | Disruption of Doppel prevents neurodegeneration in mice with extensive Prnp deletions |
Q37165759 | Diversity of microbial toluene degradation pathways |
Q41876086 | Dual role of response regulator StyR in styrene catabolism regulation |
Q28536141 | Endogenous stress caused by faulty oxidation reactions fosters evolution of 2,4-dinitrotoluene-degrading bacteria |
Q46272784 | Evolution of a new bacterial pathway for 4-nitrotoluene degradation |
Q57935386 | Evolutionary tinkering vs. rational engineering in the times of synthetic biology |
Q39793957 | Expression of the Pseudomonas putida OCT plasmid alkane degradation pathway is modulated by two different global control signals: evidence from continuous cultures |
Q33187448 | Expression of the nitroarene dioxygenase genes in Comamonas sp. strain JS765 and Acidovorax sp. strain JS42 is induced by multiple aromatic compounds |
Q34316166 | Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400. |
Q40535825 | Genetic evidence that catabolites of the Entner-Doudoroff pathway signal C source repression of the sigma54 Pu promoter of Pseudomonas putida |
Q44282474 | Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440. |
Q30761453 | In vivo UV laser footprinting of the Pseudomonas putidasigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase |
Q39679675 | Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway |
Q42621272 | Integrated response to inducers by communication between a catabolic pathway and its regulatory system |
Q44220031 | Integration host factor is essential for the optimal expression of the styABCD operon in Pseudomonas fluorescens ST. |
Q42482351 | Integration of signals through Crc and PtsN in catabolite repression of Pseudomonas putida TOL plasmid pWW0. |
Q41960802 | Key enzymes enabling the growth of Arthrobacter sp. strain JBH1 with nitroglycerin as the sole source of carbon and nitrogen |
Q30478899 | Lethal recessive myelin toxicity of prion protein lacking its central domain |
Q38921051 | Local and global regulation of transcription initiation in bacteria |
Q37552949 | Localization and characterization of two novel genes encoding stereospecific dioxygenases catalyzing 2(2,4-dichlorophenoxy)propionate cleavage in Delftia acidovorans MC1. |
Q28305783 | Messenger-specific role for nicotinic acid adenine dinucleotide phosphate in neuronal differentiation |
Q89782784 | Microbial Degradation of Hydrocarbons-Basic Principles for Bioremediation: A Review |
Q34502278 | Modeling and analysis of flux distributions in the two branches of the phosphotransferase system in Pseudomonas putida |
Q43003228 | Modulation of NAADP (nicotinic acid-adenine dinucleotide phosphate) receptors by K+ ions: evidence for multiple NAADP receptor conformations |
Q43002997 | Modulation of spontaneous transmitter release from the frog neuromuscular junction by interacting intracellular Ca(2+) stores: critical role for nicotinic acid-adenine dinucleotide phosphate (NAADP). |
Q24634308 | Molecular and biochemical characterization of the 5-nitroanthranilic acid degradation pathway in Bradyrhizobium sp. strain JS329 |
Q41859187 | Molecular and biochemical characterization of the tetralin degradation pathway in Rhodococcus sp. strain TFB |
Q28365921 | New insights into the activation of o-xylene biodegradation in Pseudomonas stutzeri OX1 by pathway substrates |
Q54513931 | Novel physiological modulation of the Pu promoter of TOL plasmid: negative regulatory role of the TurA protein of Pseudomonas putida in the response to suboptimal growth temperatures. |
Q43921065 | Occurrence and properties of glutathione S-transferases in phenol-degrading Pseudomonas strains |
Q41673115 | PnpM, a LysR-Type Transcriptional Regulator Activates the Hydroquinone Pathway in para-Nitrophenol Degradation in Pseudomonas sp. Strain WBC-3. |
Q54479322 | Problems with metagenomic screening. |
Q34514355 | Product repression of alkane monooxygenase expression in Pseudomonas butanovora |
Q36026783 | Promoters in the environment: transcriptional regulation in its natural context |
Q34746810 | Ralstonia solanacearum, a widespread bacterial plant pathogen in the post-genomic era. |
Q43256702 | Reconstructing the evolutionary history of nitrotoluene detection in the transcriptional regulator NtdR. |
Q31034552 | Regulation of phenylacetic acid uptake is σ54 dependent in Pseudomonas putida CA-3. |
Q44895220 | Repression of Pseudomonas putida phenanthrene-degrading activity by plant root extracts and exudates |
Q34747563 | Selection for growth on 3-nitrotoluene by 2-nitrotoluene-utilizing Acidovorax sp. strain JS42 identifies nitroarene dioxygenases with altered specificities. |
Q44511093 | Selective inhibition of a two-step egress of malaria parasites from the host erythrocyte |
Q40744051 | Simultaneous degradation of atrazine and phenol by Pseudomonas sp. strain ADP: effects of toxicity and adaptation |
Q38363072 | Solubilization of receptors for the novel Ca2+-mobilizing messenger, nicotinic acid adenine dinucleotide phosphate |
Q30533958 | Spatial association with PTEX complexes defines regions for effector export into Plasmodium falciparum-infected erythrocytes |
Q42517113 | Starvation- and xenobiotic-related transcriptomic responses of the sulfanilic acid-degrading bacterium, Novosphingobium resinovorum SA1. |
Q50253285 | Strain-specific consumption and transformation of alga-derived dissolved organic matter by members of the Limnohabitans-C and Polynucleobacter-B clusters of Betaproteobacteria. |
Q39290864 | Structural basis for the transcriptional repressor NicR2 in nicotine degradation from Pseudomonas |
Q29346856 | The IHF regulon of exponentially growing Pseudomonas putida cells |
Q36239649 | The Pseudomonas putida Crc global regulator controls the expression of genes from several chromosomal catabolic pathways for aromatic compounds |
Q30399637 | The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB |
Q57935557 | The differential response of thePbenpromoter ofPseudomonas putida mt-2 to BenR and XylS prevents metabolic conflicts inm-xylene biodegradation |
Q43560009 | The essential HupB and HupN proteins of Pseudomonas putida provide redundant and nonspecific DNA-bending functions |
Q33343109 | The interplay of StyR and IHF regulates substrate-dependent induction and carbon catabolite repression of styrene catabolism genes in Pseudomonas fluorescens ST. |
Q40781028 | The tamoxifen-responsive estrogen receptor alpha mutant D351Y shows reduced tamoxifen-dependent interaction with corepressor complexes |
Q34747842 | Transcriptional activation of multiple operons involved in para-nitrophenol degradation by Pseudomonas sp. Strain WBC-3 |
Q40175807 | Transcriptional regulation of the ant operon, encoding two-component anthranilate 1,2-dioxygenase, on the carbazole-degradative plasmid pCAR1 of Pseudomonas resinovorans strain CA10. |
Q38347839 | Transient XylR binding to the UAS of the Pseudomonas putida sigma54 promoter Pu revealed with high intensity UV footprinting in vivo |
Q51823379 | Triggering of Ca2+ signals by NAADP-gated two-pore channels: a role for membrane contact sites? |
Q40731615 | m-xylene-responsive Pu-PnifH hybrid sigma54 promoters that overcome physiological control in Pseudomonas putida KT2442. |