Diversity of microbial toluene degradation pathways

scientific article published on January 2008

Diversity of microbial toluene degradation pathways is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1016/S0065-2164(08)00401-2
P698PubMed publication ID18485280

P2093author name stringR E Parales
J V Parales
D A Pelletier
J L Ditty
P2860cites workThe purification and properties of p-cresol-(acceptor) oxidoreductase (hydroxylating), a flavocytochrome from Pseudomonas putidaQ24534722
Succinyl-CoA:(R)-benzylsuccinate CoA-transferase: an enzyme of the anaerobic toluene catabolic pathway in denitrifying bacteriaQ24548909
Anaerobic toluene catabolism of Thauera aromatica: the bbs operon codes for enzymes of beta oxidation of the intermediate benzylsuccinateQ24549039
Purification and properties of the physically associated meta-cleavage pathway enzymes 4-hydroxy-2-ketovalerate aldolase and aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600Q24672183
Overlapping substrate specificities of benzaldehyde dehydrogenase (the xylC gene product) and 2-hydroxymuconic semialdehyde dehydrogenase (the xylG gene product) encoded by TOL plasmid pWW0 of Pseudomonas putidaQ24674776
Cloning and characterization of a Pseudomonas mendocina KR1 gene cluster encoding toluene-4-monooxygenaseQ24675732
Separation and partial characterization of the enzymes of the toluene-4-monooxygenase catabolic pathway in Pseudomonas mendocina KR1Q24677064
Crystal structure of a bifunctional aldolase-dehydrogenase: sequestering a reactive and volatile intermediateQ24680858
Site-directed mutagenesis of conserved amino acids in the alpha subunit of toluene dioxygenase: potential mononuclear non-heme iron coordination sitesQ24683701
p-Cumate catabolic pathway in Pseudomonas putida Fl: cloning and characterization of DNA carrying the cmt operonQ24684519
Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600Q24684543
An archetypical extradiol-cleaving catecholic dioxygenase: the crystal structure of catechol 2,3-dioxygenase (metapyrocatechase) from Ppseudomonas putida mt-2Q27618597
Solution structure of the toluene 4-monooxygenase effector protein (T4moD)Q27631137
Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1.Q27644012
Enzymatic ketonization of 2-hydroxymuconate: specificity and mechanism investigated by the crystal structures of two isomerasesQ27732231
Structure of an aromatic-ring-hydroxylating dioxygenase-naphthalene 1,2-dioxygenaseQ27759020
Crystal structure of 4-oxalocrotonate tautomerase inactivated by 2-oxo-3-pentynoate at 2.4 A resolution: analysis and implications for the mechanism of inactivation and catalysisQ27765706
Oxidative degradation of aromatic hydrocarbons by microorganisms. I. Enzymatic formation of catechol from benzeneQ28239139
The principal determinants for the structure of the substrate-binding pocket are located within a central core of a biphenyl dioxygenase alpha subunit.Q54539972
On the role of DmpK, an auxiliary protein associated with multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.Q54572232
Genetic analysis of a transposon carrying toluene degrading genes on a TOL plasmid pWW0.Q54758580
Aerobic degradation of tetrachloroethylene by toluene-o-xylene monooxygenase of Pseudomonas stutzeri OX1.Q55034036
The meta cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes.Q55054733
Isolation and characterisation of fungi growing on volatile aromatic hydrocarbons as their sole carbon and energy sourceQ56067218
Evidence for the evolution of a single component phenol/cresol hydroxylase from a multicomponent toluene monooxygenaseQ57209410
Emissions of organic trace gases from savanna fires in southern Africa during the 1992 Southern African Fire Atmosphere Research Initiative and their impact on the formation of tropospheric ozoneQ57399321
Emissions of volatile organic compounds fromQuercus ilexL. measured by Proton Transfer Reaction Mass Spectrometry under different environmental conditionsQ58225582
Role of sigmas in transcription from the positively controlled Pm promoter of the TOL plasmid of Pseudomonas putidaQ61919951
The hydroxylation of p-cresol and its conversion to p-hydroxybenzaldehyde in Pseudomonas putidaQ67447951
Compatibility and sex specific phage plating characteristics of the TOL and NAH catabolic plasmidsQ67451633
Formation of (+)-cis-2,3-dihydroxy-1-methylcyclohexa-4,6-diene from toluene by Pseudomonas putidaQ68607404
Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by PseudomonasQ68701026
Transmissible plasmid coding for the degradation of benzoate and m-toluate in Pseudomonas arvilla mt-2Q68814359
The xylABC promoter from the Pseudomonas putida TOL plasmid is activated by nitrogen regulatory genes in Escherichia coliQ68879726
Anaerobic degradation of phenol by pure cultures of newly isolated denitrifying pseudomonadsQ69439116
Identification and characterization of Tn4653, a transposon covering the toluene transposon Tn4651 on TOL plasmid pWW0Q69848365
Evidence that anaerobic oxidation of toluene in the denitrifying bacterium Thauera aromatica is initiated by formation of benzylsuccinate from toluene and fumarateQ71255766
Incorporation of oxygen-18 into benzene by Pseudomonas putidaQ71483340
Metapyrocatechase. 3. Substrate specificity and mode of ring fissionQ71612779
Further evidence for multiple pathways in soluble methane-monooxygenase-catalysed oxidations from the measurement of deuterium kinetic isotope effectsQ71989275
Oxidative degradation of aromatic hydrocarbons by microorganisms. II. Metabolism of halogenated aromatic hydrocarbonsQ72220531
TOL plasmid-specified xylene oxygenase is a wide substrate range monooxygenase capable of olefin epoxidationQ72273546
Optimized expression and purification of toluene 4-monooxygenase hydroxylaseQ73088076
Phototrophic utilization of toluene under anoxic conditions by a new strain of blastochloris sulfoviridisQ73092943
Threonine 201 in the diiron enzyme toluene 4-monooxygenase is not required for catalysisQ73394997
Xylene monooxygenase catalyzes the multistep oxygenation of toluene and pseudocumene to corresponding alcohols, aldehydes, and acids in Escherichia coli JM101Q73615757
Changes in the regiospecificity of aromatic hydroxylation produced by active site engineering in the diiron enzyme toluene 4-monooxygenaseQ73657160
Identification and characterization of the natural electron donor ferredoxin and of FAD as a possible prosthetic group of benzoyl-CoA reductase (dearomatizing), a key enzyme of anaerobic aromatic metabolismQ74267991
Aromatic ligand binding and intramolecular signalling of the phenol-responsive sigma54-dependent regulator DmpRQ74566352
Determination of benzene and associated volatile compounds in mainstream cigarette smokeQ77111771
A two-component system involved in regulation of anaerobic toluene metabolism in Thauera aromaticaQ77311642
Characterization of hybrid biphenyl dioxygenases obtained by recombining Burkholderia sp. strain LB400 bphA with the homologous gene of Comamonas testosteroni B-356Q77418749
Application of fed-batch fermentation to the preparation of isotopically labeled or selenomethionyl-labeled proteinsQ77774201
6-Hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase and 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, enzymes of the benzoyl-CoA pathway of anaerobic aromatic metabolism in the denitrifying bacterium Thauera aromaticaQ78003326
Substrate range of benzylsuccinate synthase from Azoarcus sp. strain TQ78250624
Redox and functional analysis of the Rieske ferredoxin component of the toluene 4-monooxygenaseQ79618350
Site-directed mutagenesis of the Thauera aromatica strain T1 tutE tutFDGH gene clusterQ79741674
Crystal structure of the terminal oxygenase component of biphenyl dioxygenase derived from Rhodococcus sp. strain RHA1Q80516472
Structure of T4moC, the Rieske-type ferredoxin component of toluene 4-monooxygenaseQ83181805
Benzene and leukemiaQ94058871
Toluene dioxygenase: Purification of an iron-sulfur protein by affinity chromatographyQ28251194
Benzoyl-coenzyme A reductase (dearomatizing), a key enzyme of anaerobic aromatic metabolism. ATP dependence of the reaction, purification and some properties of the enzyme from Thauera aromatica strain K172Q28274088
cis-diol dehydrogenases encoded by the TOL pWW0 plasmid xylL gene and the Acinetobacter calcoaceticus chromosomal benD gene are members of the short-chain alcohol dehydrogenase superfamilyQ28295935
Trichloroethylene oxidation by toluene dioxygenaseQ28320135
Purification and characterisation of the NADH:acceptor reductase component of xylene monooxygenase encoded by the TOL plasmid pWW0 of Pseudomonas putida mt-2Q28326839
Genetic organization and regulation of a meta cleavage pathway for catechols produced from catabolism of toluene, benzene, phenol, and cresols by Pseudomonas pickettii PKO1Q28327234
Purification and characterisation of TOL plasmid-encoded benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase of Pseudomonas putidaQ28331199
Location and sequence of the todF gene encoding 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase in Pseudomonas putida F1Q28333469
Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWW0 plasmid xylXYZ, genes encoding benzoate dioxygenasesQ28333820
Primary structure of xylene monooxygenase: similarities to and differences from the alkane hydroxylation systemQ28334911
Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putidaQ28354983
Conformational analysis of putative regulatory subunit D of the toluene/o-xylene-monooxygenase complex from Pseudomonas stutzeri OX1Q28364571
New insights into the activation of o-xylene biodegradation in Pseudomonas stutzeri OX1 by pathway substratesQ28365921
TOM, a new aromatic degradative plasmid from Burkholderia (Pseudomonas) cepacia G4Q28367685
Substrate specificity of catechol 2,3-dioxygenase encoded by TOL plasmid pWW0 of Pseudomonas putida and its relationship to cell growthQ28369013
A novel toluene-3-monooxygenase pathway cloned from Pseudomonas pickettii PKO1Q28378293
p-Cymene catabolic pathway in Pseudomonas putida F1: cloning and characterization of DNA encoding conversion of p-cymene to p-cumateQ28378923
Anaerobic activation of toluene and o-xylene by addition to fumarate in denitrifying strain TQ28379417
Eight histidine residues are catalytically essential in a membrane-associated iron enzyme, stearoyl-CoA desaturase, and are conserved in alkane hydroxylase and xylene monooxygenaseQ28564292
Detection and classification of hyperfine-shifted 1H, 2H, and 15N resonances of the Rieske ferredoxin component of toluene 4-monooxygenaseQ30432462
Volatiles released from oak, a host tree for the bark beetle Scolytus intricatusQ30655919
Expression and purification of the recombinant subunits of toluene/o-xylene monooxygenase and reconstitution of the active complex.Q30755040
Protein engineering of toluene 4-monooxygenase of Pseudomonas mendocina KR1 for synthesizing 4-nitrocatechol from nitrobenzeneQ30767708
Structural insight into the dioxygenation of nitroarene compounds: the crystal structure of nitrobenzene dioxygenase.Q33214430
Crystal structure of the terminal oxygenase component of cumene dioxygenase from Pseudomonas fluorescens IP01.Q33716682
Involvement of the terminal oxygenase beta subunit in the biphenyl dioxygenase reactivity pattern toward chlorobiphenyls.Q33740812
Regioselectivity and enantioselectivity of naphthalene dioxygenase during arene cis-dihydroxylation: control by phenylalanine 352 in the alpha subunitQ33787481
Non-haem iron-containing oxygenases involved in the microbial biodegradation of aromatic hydrocarbonsQ33871100
Anaerobic toluene-catabolic pathway in denitrifying Thauera aromatica: activation and beta-oxidation of the first intermediate, (R)-(+)-benzylsuccinateQ33883015
Characterization and role of tbuX in utilization of toluene by Ralstonia pickettii PKO1Q33889682
Aromatic hydrocarbon dioxygenases in environmental biotechnologyQ33941468
Activation and inactivation of Pseudomonas stutzeri methylbenzene catabolism pathways mediated by a transposable elementQ33984784
Transcriptional analysis of the tutE tutFDGH gene cluster from Thauera aromatica strain T1Q33986785
Aerobic degradation of mixtures of chlorinated aliphatics by cloned toluene-o-xylene monooxygenase and toluene o-monooxygenase in resting cells.Q51373439
Pseudomonas putida B2: a tod-lux bioluminescent reporter for toluene and trichloroethylene co-metabolism.Q51552709
The rpoS gene regulates OP2, an operon for the lower pathway of xylene catabolism on the TOL plasmid, and the stress response in Pseudomonas putida mt-2.Q52531848
Codon usage patterns suggest independent evolution of two catabolic operons on toluene-degradative plasmid TOL pWW0 of Pseudomonas putida.Q52882154
The metabolism of benzoate and methylbenzoates via the meta-cleavage pathway by Pseudomonas arvilla mt-2.Q54396744
Excision of the 40kb segment of the TOL plasmid from Pseudomonas putida mt-2 involves direct repeats.Q54484265
Adding handles to unhandy substrates: anaerobic hydrocarbon activation mechanismsQ36756283
Cloning of the genes for and characterization of the early stages of toluene and o-xylene catabolism in Pseudomonas stutzeri OX1.Q36823268
Aerobic and anaerobic toluene degradation by a newly isolated denitrifying bacterium, Thauera sp. strain DNT-1.Q36933457
Altered effector specificities in regulators of gene expression: TOL plasmid xylS mutants and their use to engineer expansion of the range of aromatics degraded by bacteriaQ37406839
Toluene 3-monooxygenase of Ralstonia pickettii PKO1 is a para-hydroxylating enzymeQ37734879
Recombinant toluene-4-monooxygenase: catalytic and Mössbauer studies of the purified diiron and rieske components of a four-protein complexQ38355257
Kinetic studies of the metabolism of foreign organic compounds; the formation of benzoic acid from benzamide toluene, benzyl alcohol and benzaldehyde and its conjugation with glycine and glucuronic acid in the rabbitQ39440967
Organization and regulation of meta cleavage pathway genes for toluene and o-xylene derivative degradation in Pseudomonas stutzeri OX1.Q39491812
The TOL plasmid pWW0 xylN gene product from Pseudomonas putida is involved in m-xylene uptake.Q39505238
Toluene monooxygenase-catalyzed epoxidation of alkenesQ39536146
Substrate interactions during the biodegradation of benzene, toluene, ethylbenzene, and xylene (BTEX) hydrocarbons by the fungus Cladophialophora sp. strain T1.Q39639999
Characterization and application of xylene monooxygenase for multistep biocatalysisQ39649907
Reactivity of toluate dioxygenase with substituted benzoates and dioxygenQ39679806
Cross-regulation between a novel two-component signal transduction system for catabolism of toluene in Pseudomonas mendocina and the TodST system from Pseudomonas putidaQ39680909
Multiple pathways for toluene degradation in Burkholderia sp. strain JS150.Q39803206
Isolation and expansion of the catabolic potential of a Pseudomonas putida strain able to grow in the presence of high concentrations of aromatic hydrocarbonsQ39837507
Expression of the TOL plasmid xylS gene in Pseudomonas putida occurs from a alpha 70-dependent promoter or from alpha 70- and alpha 54-dependent tandem promoters according to the compound used for growthQ39841051
Recent findings on the genetic toxicology of benzene, toluene, xylenes and phenolsQ39849163
Characterization of hybrid toluate and benzoate dioxygenases.Q39887005
Novel pathway of toluene catabolism in the trichloroethylene-degrading bacterium g4.Q39920821
Aerobic metabolism of trichloroethylene by a bacterial isolate.Q39923483
Degradation of 1,4-dichlorobenzene by a Pseudomonas spQ39924754
Efficient degradation of trichloroethylene by a hybrid aromatic ring dioxygenaseQ39931321
Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWW0 of Pseudomonas putida for metabolism of aromaticsQ39931654
Identification of a new gene, tmoF, in the Pseudomonas mendocina KR1 gene cluster encoding toluene-4-monooxygenaseQ39939694
Toluene-4-monooxygenase, a three-component enzyme system that catalyzes the oxidation of toluene to p-cresol in Pseudomonas mendocina KR1.Q39941504
Roles of the divergent branches of the meta-cleavage pathway in the degradation of benzoate and substituted benzoatesQ39955682
Overproduction of the xylS gene product and activation of the xylDLEGF operon on the TOL plasmidQ39957830
Gene order of the TOL catabolic plasmid upper pathway operon and oxidation of both toluene and benzyl alcohol by the xylA productQ39959380
Transposon mutagenesis analysis of meta-cleavage pathway operon genes of the TOL plasmid of Pseudomonas putida mt-2Q39965774
Molecular cloning of gene xylS of the TOL plasmid: evidence for positive regulation of the xylDEGF operon by xylS.Q39971204
Localization and functional analysis of transposon mutations in regulatory genes of the TOL catabolic pathway.Q39975789
Fungal Metabolism of n-AlkylbenzenesQ40053002
Benzoate Metabolism in Pseudomonas putida ( arvilla ) mt-2: Demonstration of Two Benzoate PathwaysQ40092577
TouR-mediated effector-independent growth phase-dependent activation of the sigma54 Ptou promoter of Pseudomonas stutzeri OX1.Q40211222
A cleavage map of the TOL plasmid of Pseudomonas putida mt-2Q40290132
A family of positive regulators related to the Pseudomonas putida TOL plasmid XylS and the Escherichia coli AraC activatorsQ40515987
The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.Q40535883
Biochemistry of the soluble methane monooxygenaseQ40572952
Phenol hydroxylase and toluene/o-xylene monooxygenase from Pseudomonas stutzeri OX1: interplay between two enzymes.Q40744013
Genetic and functional analysis of the tbc operons for catabolism of alkyl- and chloroaromatic compounds in Burkholderia sp. strain JS150Q33990517
Benzylsuccinate synthase of Azoarcus sp. strain T: cloning, sequencing, transcriptional organization, and its role in anaerobic toluene and m-xylene mineralizationQ33997078
Structure and increased thermostability of Rhodococcus sp. naphthalene 1,2-dioxygenase.Q34109928
(R)-Benzylsuccinyl-CoA dehydrogenase of Thauera aromatica, an enzyme of the anaerobic toluene catabolic pathwayQ34158055
The black cat/white cat principle of signal integration in bacterial promotersQ34166888
Anaerobic biodegradation of saturated and aromatic hydrocarbonsQ34280270
Identification of a membrane protein and a truncated LysR-type regulator associated with the toluene degradation pathway in Pseudomonas putida F1.Q34293547
Metabolism of alkylbenzenes, alkanes, and other hydrocarbons in anaerobic bacteriaQ34300388
Structure-function analysis of the bacterial aromatic ring-hydroxylating dioxygenasesQ34407705
Biochemical and genetic characterization of benzylsuccinate synthase from Thauera aromatica: a new glycyl radical enzyme catalysing the first step in anaerobic toluene metabolism.Q34472361
Fungi growing on aromatic hydrocarbons: biotechnology's unexpected encounter with biohazard?Q34488480
The TodS-TodT two-component regulatory system recognizes a wide range of effectors and works with DNA-bending proteinsQ34650292
Metabolic diversity in aromatic compound utilization by anaerobic microbesQ34762748
Insight into the mechanism of aromatic hydroxylation by toluene 4-monooxygenase by use of specifically deuterated toluene and p-xyleneQ34916692
Anaerobic oxidation of aromatic compounds and hydrocarbons.Q34987351
Comparison of factors influencing trichloroethylene degradation by toluene-oxidizing bacteriaQ35189166
Rapid purification of the oxygenase component of toluene dioxygenase from a polyol-responsive monoclonal antibodyQ35191480
Identification and modification of biphenyl dioxygenase sequences that determine the specificity of polychlorinated biphenyl degradationQ35203805
Altering toluene 4-monooxygenase by active-site engineering for the synthesis of 3-methoxycatechol, methoxyhydroquinone, and methylhydroquinoneQ35275351
Evolution of the soluble diiron monooxygenasesQ35556394
Involvement of IHF protein in expression of the Ps promoter of the Pseudomonas putida TOL plasmidQ35587473
Evolutionary relationships among extradiol dioxygenasesQ35614251
Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1: role of the tbuA1 promoter (PtbuA1) in the expression of its cognate activator, TbuT.Q35615799
Anaerobic degradation of monoaromatic hydrocarbonsQ35634592
Fungal biocatalysts in the biofiltration of VOC-polluted air.Q35893752
Cloning and sequence analysis of the ntrA (rpoN) gene of Pseudomonas putidaQ35949098
Cross talk between catabolic pathways in Pseudomonas putida: XylS-dependent and -independent activation of the TOL meta operon requires the same cis-acting sequences within the Pm promoterQ35975018
A bacterial basic region leucine zipper histidine kinase regulating toluene degradationQ35997638
Degradation of benzene, toluene, ethylbenzene, and xylenes (BTEX) by the lignin-degrading basidiomycete Phanerochaete chrysosporiumQ36064376
Toluene degradation by Pseudomonas putida F1: genetic organization of the tod operonQ36070559
Mössbauer studies of alkane omega-hydroxylase: evidence for a diiron cluster in an integral-membrane enzymeQ36073433
Carbon source-dependent inhibition of xyl operon expression of the Pseudomonas putida TOL plasmidQ36106118
Primary sequence of the Escherichia coli fadL gene encoding an outer membrane protein required for long-chain fatty acid transportQ36125332
Complete nucleotide sequence of tbuD, the gene encoding phenol/cresol hydroxylase from Pseudomonas pickettii PKO1, and functional analysis of the encoded enzymeQ36139281
Characterization of five genes in the upper-pathway operon of TOL plasmid pWW0 from Pseudomonas putida and identification of the gene productsQ36181865
Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathwayQ36184658
Growth-phase-dependent expression of the Pseudomonas putida TOL plasmid pWW0 catabolic genesQ36190843
Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.Q36191694
Activation of the xylDLEGF promoter of the TOL toluene-xylene degradation pathway by overproduction of the xylS regulatory gene productQ36240721
Molecular cloning, characterization, and regulation of a Pseudomonas pickettii PKO1 gene encoding phenol hydroxylase and expression of the gene in Pseudomonas aeruginosa PAO1cQ36255933
Oxygen-18 tracer studies of enzyme reactions with radical/cation diagnostic probesQ36260017
New glycyl radical enzymes catalysing key metabolic steps in anaerobic bacteriaQ36283674
Catabolism of pseudocumene and 3-ethyltoluene by Pseudomonas putida (arvilla) mt-2: evidence for new functions of the TOL (pWWO) plasmidQ36319607
Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathwayQ36382584
TOL is a broad-host-range plasmidQ36470078
Purification and properties of cis-toluene dihydrodiol dehydrogenase from Pseudomonas putidaQ36602037
Fungal metabolism of polycyclic aromatic hydrocarbons: past, present and future applications in bioremediationQ40871224
Substrate-dependent regulation of anaerobic degradation pathways for toluene and ethylbenzene in a denitrifying bacterium, strain EbN1.Q40942939
The beta-ketoadipate pathway and the biology of self-identityQ41199628
Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulatorsQ41620651
Genetic analysis of a relaxed substrate specificity aromatic ring dioxygenase, toluate 1,2-dioxygenase, encoded by TOL plasmid pWW0 of Pseudomonas putidaQ41790386
Substrate-specificity of benzyl alcohol dehydrogenase and benzaldehyde dehydrogenase encoded by TOL plasmid pWW0. Metabolic and mechanistic implications.Q41807289
Regiospecificity of two multicomponent monooxygenases from Pseudomonas stutzeri OX1: molecular basis for catabolic adaptation of this microorganism to methylated aromatic compoundsQ41813137
Isolation and Metabolic Characterization of a Pseudomonas stutzeri Mutant Able To Grow on the Three Isomers of Xylene.Q41828577
Mutations of toluene-4-monooxygenase that alter regiospecificity of indole oxidation and lead to production of novel indigoid pigmentsQ42016086
Conjugational transfer of recombinant DNA in cultures and in soils: host range of Pseudomonas putida TOL plasmidsQ42095813
The metabolism of aromatic acids by micro-organisms. Metabolic pathways in the fungiQ42172355
Purification and characterization of toluene 2-monooxygenase from Burkholderia cepacia G4Q42276458
Sequence and expression of the todGIH genes involved in the last three steps of toluene degradation by Pseudomonas putida F1.Q42283945
Purification of glutaryl-CoA dehydrogenase from Pseudomonas sp., an enzyme involved in the anaerobic degradation of benzoateQ42289368
Toluene Elicits a Carbon Starvation Response in Pseudomonas putida mt-2 Containing the TOL Plasmid pWW0.Q42492039
The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1.Q42640908
XylUW, two genes at the start of the upper pathway operon of TOL plasmid pWW0, appear to play no essential part in determining its catabolic phenotypeQ42649398
Sequence analysis of the gene cluster encoding toluene-3-monooxygenase from Pseudomonas pickettii PKO1.Q42690436
Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas putidaQ42692935
Two identical copies of IS1246, a 1275 base pair sequence related to other bacterial insertion sequences, enclose the xyl genes on TOL plasmid pWW0.Q42694917
p-Cresol methylhydroxylase. Assay and general propertiesQ42849717
Identification and expression of benzylsuccinate synthase genes in a toluene-degrading methanogenic consortiumQ42913219
Mutants of Pseudomonas cepacia G4 defective in catabolism of aromatic compounds and trichloroethyleneQ42926347
Benzylsuccinate Formation as a Means of Anaerobic Toluene Activation by Sulfate-Reducing Strain PRTOL1.Q43231887
A stable organic free radical in anaerobic benzylsuccinate synthase of Azoarcus sp. strain T.Q43559553
Aromatic hydroxylation catalyzed by toluene 4-monooxygenase in organic solvent/aqueous buffer mixturesQ43585575
Evolution of catabolic pathways and metabolic versatility in Pseudomonas stutzeri OX1.Q43717961
Removal of toluene in a vapor-phase bioreactor containing a strain of the dimorphic black yeast Exophiala lecanii-corniQ43824193
Operon structure and expression of the genes for benzylsuccinate synthase in Thauera aromatica strain K172.Q43864270
Combined participation of hydroxylase active site residues and effector protein binding in a para to ortho modulation of toluene 4-monooxygenase regiospecificityQ43894618
Biodegradation of volatile organic compounds by five fungal speciesQ43961733
Construction and characterization of insertion/deletion mutations of the tutF, tutD, and tutG genes of Thauera aromatica strain T1.Q44225263
Biochemical and genetic evidence of benzylsuccinate synthase in toluene-degrading, ferric iron-reducing Geobacter metallireducens.Q44227451
Travels of a Pseudomonas, from Japan around the worldQ44282469
Xylene monooxygenase, a membrane-spanning non-heme diiron enzyme that hydroxylates hydrocarbons via a substrate radical intermediateQ44481288
Toluene monooxygenase from the fungus Cladosporium sphaerospermum.Q44668572
Characterization of a new solvent-responsive gene locus in Pseudomonas putida F1 and its functionalization as a versatile biosensor.Q44670974
Genes involved in the anaerobic degradation of toluene in a denitrifying bacterium, strain EbN1.Q44736265
Bioremediation of BTEX hydrocarbons: effect of soil inoculation with the toluene-growing fungus Cladophialophora sp. strain T1.Q44769336
Role of benzylsuccinate in the induction of the tutE tutFDGH gene complex of T. aromatica strain T1.Q44778850
Crystal structure of the toluene/o-xylene monooxygenase hydroxylase from Pseudomonas stutzeri OX1. Insight into the substrate specificity, substrate channeling, and active site tuning of multicomponent monooxygenasesQ44851116
The pyruvate formate lyase family: sequences, structures and activationQ45006204
Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complexQ45081849
Controlling the regiospecific oxidation of aromatics via active site engineering of toluene para-monooxygenase of Ralstonia pickettii PKO1.Q45119178
Remarkable aliphatic hydroxylation by the diiron enzyme toluene 4-monooxygenase in reactions with radical or cation diagnostic probes norcarane, 1,1-dimethylcyclopropane, and 1,1-diethylcyclopropaneQ45184981
Aerobic biodegradation of N-nitrosodimethylamine (NDMA) by axenic bacterial strainsQ45239455
Biodegradation of toluene by the new fungal isolates Paecilomyces variotii and Exophiala oligosperma.Q45258589
Regiospecific oxidation of naphthalene and fluorene by toluene monooxygenases and engineered toluene 4-monooxygenases of Pseudomonas mendocina KR1.Q45276511
Kinetics of 1,4-dioxane biodegradation by monooxygenase-expressing bacteria.Q45997694
Crystal structures and functional studies of T4moD, the toluene 4-monooxygenase catalytic effector proteinQ46480168
Evolution of bacterial and archaeal multicomponent monooxygenasesQ47613891
Nucleotide sequence of the regulatory gene xylR of the TOL plasmid from Pseudomonas putidaQ48320573
Nucleotide sequence of the promoter region of the xylDEGF operon on TOL plasmid of Pseudomonas putidaQ48387862
Component interactions and implications for complex formation in the multicomponent toluene 4-monooxygenase.Q51219801
P921main subjecttolueneQ15779
P304page(s)1-73, 2 p following 264
P577publication date2008-01-01
P1433published inAdvances in Applied MicrobiologyQ15753069
P1476titleDiversity of microbial toluene degradation pathways
P478volume64

Reverse relations

cites work (P2860)
Q41856320Aerobic Toluene Degraders in the Rhizosphere of a Constructed Wetland Model Show Diurnal Polyhydroxyalkanoate Metabolism
Q73476612Bacteria isolated from Bengal cat (Felis catus × Prionailurus bengalensis) anal sac secretions produce volatile compounds potentially associated with animal signaling
Q84961759Biodegradation of Chlorinated and Non-chlorinated VOCs from Pharmaceutical Industries
Q61443121Biodegradation of naphthalene, BTEX, and aliphatic hydrocarbons by Paraburkholderia aromaticivorans BN5 isolated from petroleum-contaminated soil
Q88228850Catabolism of 2-Hydroxypyridine by Burkholderia sp. Strain MAK1: a 2-Hydroxypyridine 5-Monooxygenase Encoded by hpdABCDE Catalyzes the First Step of Biodegradation
Q52381766Characterization of toluene metabolism by methanotroph and its effect on methane oxidation.
Q94561417Comparative Genomic Analysis of Capsule-Producing Black Yeasts Exophiala dermatitidis and Exophiala spinifera, Potential Agents of Disseminated Mycoses
Q36297912Cooperation in carbon source degradation shapes spatial self-organization of microbial consortia on hydrated surfaces.
Q90328073Discovery of CC bond-forming and bond-breaking radical enzymes: enabling transformations for metabolic engineering
Q39471499Draft Genome Sequence of Exophiala mesophila, a Black Yeast with High Bioremediation Potential.
Q50020611Exploring the (almost) unknown: archaeal two-component systems
Q47769647Forensic source attribution for toluene in environmental samples
Q64122545Genome Sequence of the Black Yeast Exophiala lecanii-corni
Q47869100Genomic Understanding of an Infectious Brain Disease from the Desert.
Q41202273Genomic and transcriptomic analysis of the toluene degrading black yeast Cladophialophora immunda.
Q42411109High stability and fast recovery of expression of the TOL plasmid-carried toluene catabolism genes of Pseudomonas putida mt-2 under conditions of oxygen limitation and oscillation
Q46378230Integrating grant-funded research into the undergraduate biology curriculum using IMG-ACT.
Q36332103Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model
Q35684915Microbial Toluene Removal in Hypoxic Model Constructed Wetlands Occurs Predominantly via the Ring Monooxygenation Pathway
Q35020066Microbial community and function of enrichment cultures with methane and toluene
Q37941366Microbial degradation of aromatic compounds - from one strategy to four
Q27010054Microbial transformation of the Deepwater Horizon oil spill-past, present, and future perspectives
Q42194012Multiple signals modulate the activity of the complex sensor kinase TodS.
Q35971722Pathogenic Yet Environmentally Friendly? Black Fungal Candidates for Bioremediation of Pollutants.
Q90225567Petroleum Hydrocarbon Contamination in Terrestrial Ecosystems-Fate and Microbial Responses
Q38060811Tactic responses to pollutants and their potential to increase biodegradation efficiency.
Q41861368The ecology of anaerobic degraders of BTEX hydrocarbons in aquifers

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