Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600

scientific article

Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600 is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/JB.174.3.711-724.1992
P932PMC publication ID206147
P698PubMed publication ID1732207

P50authorVictoria ShinglerQ56332412
P2093author name stringJ Powlowski
U Marklund
P2860cites workDeterminant of cistron specificity in bacterial ribosomesQ22122424
Catabolism of phenylpropionic acid and its 3-hydroxy derivative by Escherichia coliQ24685386
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4Q25938983
Transcription termination and the regulation of gene expressionQ28299849
Genetic organization and regulation of a meta cleavage pathway for catechols produced from catabolism of toluene, benzene, phenol, and cresols by Pseudomonas pickettii PKO1Q28327234
Location and sequence of the todF gene encoding 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase in Pseudomonas putida F1Q28333469
Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putidaQ28354983
Prediction of the occurrence of the ADP-binding beta alpha beta-fold in proteins, using an amino acid sequence fingerprintQ29614862
Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vectorQ29615289
Stereospecific enzymes in the degradation of aromatic compounds by pseudomonas putida.Q33783103
The meta cleavage of catechol by Azotobacter species. 4-Oxalocrotonate pathwayQ34206753
Location and organization of the dimethylphenol catabolic genes of Pseudomonas CF600.Q34518895
Molecular analysis of a plasmid-encoded phenol hydroxylase from Pseudomonas CF600.Q35544543
The nucleotide sequence of leuA from Salmonella typhimurium.Q35832726
Involvement of Pseudomonas putida RpoN sigma factor in regulation of various metabolic functionsQ36180646
Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.Q36191694
In vitro analysis of polypeptide requirements of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.Q36191727
Plasmid gene organization: naphthalene/salicylate oxidationQ36280676
Stereospecificity in meta-fission catabolic pathwaysQ36331461
Simple method for identification of plasmid-coded proteinsQ36342094
The TOL plasmids: determinants of the catabolism of toluene and the xylenes.Q38014397
Microbial degradation of haloaromaticsQ39548234
Nucleotide sequencing and characterization of the genes encoding benzene oxidation enzymes of Pseudomonas putidaQ39962906
Transposon mutagenesis analysis of meta-cleavage pathway operon genes of the TOL plasmid of Pseudomonas putida mt-2Q39965774
Control of catechol meta-cleavage pathway in Alcaligenes eutrophus.Q39976125
Nucleotide sequence and expression of the catechol 2,3-dioxygenase-encoding gene of phenol-catabolizing Pseudomonas CF600.Q41863611
DNA sequence determination of the TOL plasmid (pWW0) xylGFJ genes of Pseudomonas putida: implications for the evolution of aromatic catabolismQ42619645
Nucleotide sequence analysis of the Pseudomonas putida PpG7 salicylate hydroxylase gene (nahG) and its 3'-flanking regionQ42626727
Nucleotide sequence of a 24,206-base-pair DNA fragment carrying the entire nitrogen fixation gene cluster of Klebsiella pneumoniaeQ42653186
THE BACTERIAL DEGRADATION OF CATECHOL.Q42975079
Nucleotide sequences of the meta-cleavage pathway enzymes 2-hydroxymuconic semialdehyde dehydrogenase and 2-hydroxymuconic semialdehyde hydrolase from Pseudomonas CF600.Q48263313
Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2BADE genes and their expression in Escherichia coliQ48287612
Evolutionary relationships between catabolic pathways for aromatics: conservation of gene order and nucleotide sequences of catechol oxidation genes of pWW0 and NAH7 plasmidsQ48333815
The oxidation of acetaldehyde to acetyl coenzyme A.Q55036875
The meta cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes.Q55054733
Protein measurement using bicinchoninic acid: elimination of interfering substancesQ56929217
Identification of the V factor needed for synthesis of the iron-molybdenum cofactor of nitrogenase as homocitrateQ59097238
The metabolic divergence in the meta cleavage of catechols by Pseudomonas putida NCIB 10015. Physiological significance and evolutionary implicationsQ68649126
The xylABC promoter from the Pseudomonas putida TOL plasmid is activated by nitrogen regulatory genes in Escherichia coliQ68879726
Divergent evolution of chloroplast-type ferredoxinsQ70221320
A new metabolic pathway of catecholQ79033125
P433issue3
P407language of work or nameEnglishQ1860
P304page(s)711-724
P577publication date1992-02-01
P1433published inJournal of BacteriologyQ478419
P1476titleNucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600
P478volume174

Reverse relations

cites work (P2860)
Q618009242,3-Dihydroxybenzoate meta-Cleavage Pathway is Involved in o-Phthalate Utilization in Pseudomonas sp. strain PTH10
Q351856342,4-Dichlorophenoxyacetic acid-degrading bacteria contain mosaics of catabolic genes.
Q397431712-Hydroxypenta-2,4-dienoate metabolic pathway genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.
Q446439773- and 4-alkylphenol degradation pathway in Pseudomonas sp. strain KL28: genetic organization of the lap gene cluster and substrate specificities of phenol hydroxylase and catechol 2,3-dioxygenase
Q55287593A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways.
Q74450469A novel -2Fe-2S- ferredoxin from Pseudomonas putida mt2 promotes the reductive reactivation of catechol 2,3-dioxygenase
Q50200395A novel NADPH-dependent reductase of Sulfobacillus acidophilus TPY phenol hydroxylase: expression, characterization, and functional analysis
Q44280698A novel approach for extraction of PCR-compatible DNA from activated sludge samples collected from different biological effluent treatment plants
Q39803741Acquisition of a deliberately introduced phenol degradation operon, pheBA, by different indigenous Pseudomonas species
Q38319844Adaptation of Comamonas testosteroni TA441 to utilization of phenol by spontaneous mutation of the gene for a trans-acting factor
Q35983770An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenols
Q35581088Aromatic effector activation of the NtrC-like transcriptional regulator PhhR limits the catabolic potential of the (methyl)phenol degradative pathway it controls
Q24682752Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification, and protein characterization
Q30361434Binding and channeling of alternative substrates in the enzyme DmpFG: a molecular dynamics study.
Q41964587Biochemistry and genetics of PCB metabolism
Q35770014Biological channeling of a reactive intermediate in the bifunctional enzyme DmpFG.
Q92351056Biphenyl/PCB Degrading bph Genes of Ten Bacterial Strains Isolated from Biphenyl-Contaminated Soil in Kitakyushu, Japan: Comparative and Dynamic Features as Integrative Conjugative Elements (ICEs)
Q37735901Carbon catabolite repression in Pseudomonas : optimizing metabolic versatility and interactions with the environment.
Q93088205Catabolism of Alkylphenols in Rhodococcus via a Meta-Cleavage Pathway Associated With Genomic Islands
Q35190577Catechol 2,3-dioxygenases functional in oxygen-limited (hypoxic) environments.
Q42122224Characterization of novel carbazole catabolism genes from gram-positive carbazole degrader Nocardioides aromaticivorans IC177.
Q33787516Characterization of three XylT-like [2Fe-2S] ferredoxins associated with catabolism of cresols or naphthalene: evidence for their involvement in catechol dioxygenase reactivation.
Q39925462Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators
Q52882154Codon usage patterns suggest independent evolution of two catabolic operons on toluene-degradative plasmid TOL pWW0 of Pseudomonas putida.
Q42220191Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds
Q48121073Comparison of the nucleotide sequences of the meta-cleavage pathway genes of TOL plasmid pWW0 from Pseudomonas putida with other meta-cleavage genes suggests that both single and multiple nucleotide substitutions contribute to enzyme evolution
Q42621286Complete nucleotide sequence and evolutionary significance of a chromosomally encoded naphthalene-degradation lower pathway from Pseudomonas stutzeri AN10.
Q93106724Comprehensive genomic analysis of an indigenous Pseudomonas pseudoalcaligenes degrading phenolic compounds
Q33199044Construction of chimeric catechol 2,3-dioxygenase exhibiting improved activity against the suicide inhibitor 4-methylcatechol.
Q35968328Cross-regulation by XylR and DmpR activators of Pseudomonas putida suggests that transcriptional control of biodegradative operons evolves independently of catabolic genes
Q24680858Crystal structure of a bifunctional aldolase-dehydrogenase: sequestering a reactive and volatile intermediate
Q42607858Deciphering environmental signal integration in sigma54-dependent promoters with a simple mathematical model
Q41763366Degradation of 2,3-dihydroxybenzoate by a novel meta-cleavage pathway.
Q57767104Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation
Q77308580Determination of plasmid-encoded functions in Rhizobium leguminosarum biovar trifolii using proteome analysis of plasmid-cured derivatives
Q71834307Differential DNA bending introduced by the Pseudomonas putida LysR‐type regulator, CatR, at the plasmid‐borne pheBA and chromosomal catBC promoters
Q37165759Diversity of microbial toluene degradation pathways
Q35556394Evolution of the soluble diiron monooxygenases
Q41916607Expression, purification and crystallization of 2-oxo-hept-4-ene-1,7-dioate hydratase (HpcG) from Escherichia coli C.
Q33990517Genetic and functional analysis of the tbc operons for catabolism of alkyl- and chloroaromatic compounds in Burkholderia sp. strain JS150
Q39504571Genetic and structural organization of the aminophenol catabolic operon and its implication for evolutionary process
Q39503764Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.
Q42607132Genetic characterization and evolutionary implications of a chromosomally encoded naphthalene-degradation upper pathway from Pseudomonas stutzeri AN10.
Q24679110Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12
Q40535888Genetics and biochemistry of phenol degradation by Pseudomonas sp. CF600.
Q35530953Genome sequence of Sphingobium yanoikuyae XLDN2-5, an efficient carbazole-degrading strain.
Q64071785Genomic and Physiological Traits of the Marine Bacterium QD168 Isolated From Quintero Bay, Central Chile, Reveal a Robust Adaptive Response to Environmental Stressors
Q36574440Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150
Q35192654Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the gene
Q28486269Identification of genes and pathways related to phenol degradation in metagenomic libraries from petroleum refinery wastewater
Q48053863Improvement of RNA-SIP by pyrosequencing to identify putative 4-n-nonylphenol degraders in activated sludge
Q39526389In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter
Q34058166In vivo reactivation of catechol 2,3-dioxygenase mediated by a chloroplast-type ferredoxin: a bacterial strategy to expand the substrate specificity of aromatic degradative pathways
Q39694558Integration of global regulation of two aromatic-responsive sigma(54)-dependent systems: a common phenotype by different mechanisms.
Q35540708Isolation of oxygenase genes for indigo-forming activity from an artificially polluted soil metagenome by functional screening using Pseudomonas putida strains as hosts.
Q48074414Localization and organization of phenol degradation genes of Pseudomonas putida strain H.
Q35749111Means to improve the effect of in situ bioremediation of contaminated soil: an overview of novel approaches
Q33358902Metabolic reconstruction of aromatic compounds degradation from the genome of the amazing pollutant-degrading bacterium Cupriavidus necator JMP134.
Q35600425Molecular characterization of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli W: engineering a mobile aromatic degradative cluster
Q36106842Molecular characterization of the Erwinia chrysanthemi kdgK gene involved in pectin degradation.
Q40535913Molecular genetics and evolutionary relationship of PCB-degrading bacteria
Q35655423Molecular mechanisms of genetic adaptation to xenobiotic compounds
Q36683268Multiple genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase in the gram-positive polychlorinated biphenyl-degrading bacterium Rhodococcus erythropolis TA421, isolated from a termite ecosystem
Q33992097NahY, a catabolic plasmid-encoded receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene
Q56899473New nucleotide sequence data on the EMBL File Server
Q33479985Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis
Q35185697Nucleotide sequence analysis of genes encoding a toluene/benzene-2-monooxygenase from Pseudomonas sp. strain JS150.
Q39932667Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102
Q43921065Occurrence and properties of glutathione S-transferases in phenol-degrading Pseudomonas strains
Q24672183Purification and properties of the physically associated meta-cleavage pathway enzymes 4-hydroxy-2-ketovalerate aldolase and aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600
Q95294432Rational engineering of the TOL meta-cleavage pathway
Q38355482Regulation of the Bacillus subtilis divergent yetL and yetM genes by a transcriptional repressor, YetL, in response to flavonoids.
Q97094156Removal of dimethylphenols and ammonium in laboratory-scale horizontal subsurface flow constructed wetlands
Q33988525Role of the DmpR-mediated regulatory circuit in bacterial biodegradation properties in methylphenol-amended soils.
Q36108321RpoN (sigma 54) is required for conversion of phenol to catechol in Acinetobacter calcoaceticus
Q39678463Salicylate 5-hydroxylase from Ralstonia sp. strain U2: a monooxygenase with close relationships to and shared electron transport proteins with naphthalene dioxygenase
Q39930931Sensing of aromatic compounds by the DmpR transcriptional activator of phenol-catabolizing Pseudomonas sp. strain CF600
Q28344977The 4-oxalomesaconate hydratase gene, involved in the protocatechuate 4,5-cleavage pathway, is essential to vanillate and syringate degradation in Sphingomonas paucimobilis SYK-6
Q48052684The bphDEF meta-cleavage pathway genes involved in biphenyl/polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphACB genes in Rhodococcus sp. strain RHA1.
Q40535883The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.
Q38248233Transcriptional response machineries of Bacillus subtilis conducive to plant growth promotion.
Q24656257Uncovering the protocatechuate 2,3-cleavage pathway genes
Q38310463Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707.
Q35759397Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1.
Q39501870areCBA is an operon in Acinetobacter sp. strain ADP1 and Is controlled by AreR, a sigma(54)-dependent regulator
Q24684519p-Cumate catabolic pathway in Pseudomonas putida Fl: cloning and characterization of DNA carrying the cmt operon

Search more.