Comparison of the nucleotide sequences of the meta-cleavage pathway genes of TOL plasmid pWW0 from Pseudomonas putida with other meta-cleavage genes suggests that both single and multiple nucleotide substitutions contribute to enzyme evolution

scientific article published in May 1993

Comparison of the nucleotide sequences of the meta-cleavage pathway genes of TOL plasmid pWW0 from Pseudomonas putida with other meta-cleavage genes suggests that both single and multiple nucleotide substitutions contribute to enzyme evolution is …
instance of (P31):
scholarly articleQ13442814

External links are
P698PubMed publication ID8510667

P50authorShigeaki HarayamaQ43023233
P2093author name stringM Rekik
P2860cites workDNA sequencing with chain-terminating inhibitorsQ22066207
Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600Q24684543
A constant rate of spontaneous mutation in DNA-based microbesQ28271032
The origin of mutantsQ28288915
cis-diol dehydrogenases encoded by the TOL pWW0 plasmid xylL gene and the Acinetobacter calcoaceticus chromosomal benD gene are members of the short-chain alcohol dehydrogenase superfamilyQ28295935
Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWW0 plasmid xylXYZ, genes encoding benzoate dioxygenasesQ28333820
Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putidaQ28354983
Recent development of the neutral theory viewed from the Wrightian tradition of theoretical population geneticsQ28775811
Evolution in bacteria: evidence for a universal substitution rate in cellular genomesQ29618187
Location and organization of the dimethylphenol catabolic genes of Pseudomonas CF600.Q34518895
Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenasesQ36152441
Characterization of five genes in the upper-pathway operon of TOL plasmid pWW0 from Pseudomonas putida and identification of the gene productsQ36181865
Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600.Q36191694
Plasmid gene organization: naphthalene/salicylate oxidationQ36280676
Nucleotide sequence divergence and functional constraint in mRNA evolutionQ36419204
Spontaneous mutationQ37041840
Fidelity mechanisms in DNA replicationQ37285267
Adaptive evolution that requires multiple spontaneous mutations: mutations involving base substitutionsQ37542723
Directed evolution of a bacterial operonQ37790328
The TOL plasmids: determinants of the catabolism of toluene and the xylenes.Q38014397
The evolution of multigene families: human haptoglobin genesQ39461625
Nucleotide sequence of xylE from the TOL pDK1 plasmid and structural comparison with isofunctional catechol-2,3-dioxygenase genes from TOL, pWW0 and NAH7Q39941384
Metabolism of toluene and xylenes by Pseudomonas (putida (arvilla) mt-2: evidence for a new function of the TOL plasmidQ40036071
Nucleotide sequence and expression of the catechol 2,3-dioxygenase-encoding gene of phenol-catabolizing Pseudomonas CF600.Q41863611
DNA sequence determination of the TOL plasmid (pWW0) xylGFJ genes of Pseudomonas putida: implications for the evolution of aromatic catabolismQ42619645
Nucleotide sequence analysis of the Pseudomonas putida PpG7 salicylate hydroxylase gene (nahG) and its 3'-flanking regionQ42626727
Molecular considerations in the evolution of bacterial genesQ44186815
The use of fluorescein isothiocyanate in the determination of the bacterial biomass of grassland soilQ44940372
Theoretical foundations for a quantitative approach to paleogeneticsQ46112726
Nucleotide sequences of the meta-cleavage pathway enzymes 2-hydroxymuconic semialdehyde dehydrogenase and 2-hydroxymuconic semialdehyde hydrolase from Pseudomonas CF600.Q48263313
Evolutionary relationships between catabolic pathways for aromatics: conservation of gene order and nucleotide sequences of catechol oxidation genes of pWW0 and NAH7 plasmidsQ48333815
Nucleotide sequence and expression of gene nahH of plasmid NAH7 and homology with gene xylE of TOL pWWO.Q48351295
Complete nucleotide sequence of the metapyrocatechase gene on the TOI plasmid of Pseudomonas putida mt-2.Q48399500
Molecular analysis of regulatory and structural xyl genes of the TOL plasmid pWW53-4.Q54407606
The presence of two complete homologous meta pathway operons on TOL plasmid pWW53.Q54739287
The meta cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes.Q55054733
Construction of hybrid xylE genes between the two duplicate homologous genes from TOL plasmid pWW53: comparison of the kinetic properties of the gene productsQ68637840
Divergent evolution of chloroplast-type ferredoxinsQ70221320
Physical and functional mapping of two cointegrate plasmids derived from RP4 and TOL plasmid pDK1Q70267259
P433issue1-2
P921main subjectPseudomonas putidaQ2738168
P304page(s)81-89
P577publication date1993-05-01
P1433published inMolecular Genetics and GenomicsQ15753424
P1476titleComparison of the nucleotide sequences of the meta-cleavage pathway genes of TOL plasmid pWW0 from Pseudomonas putida with other meta-cleavage genes suggests that both single and multiple nucleotide substitutions contribute to enzyme evolution
P478volume239

Reverse relations

cites work (P2860)
Q52882154Codon usage patterns suggest independent evolution of two catabolic operons on toluene-degradative plasmid TOL pWW0 of Pseudomonas putida.
Q39649751Coexistence of two distinct copies of naphthalene degradation genes in Pseudomonas strains isolated from the western Mediterranean region
Q44810597Construction of transformant reporters carrying fused genes using pcbC promoter of Pseudomonas sp DJ-12 for detection of aromatic pollutants
Q41763366Degradation of 2,3-dihydroxybenzoate by a novel meta-cleavage pathway.
Q40535918Evolution of chlorocatechol catabolic pathways. Conclusions to be drawn from comparisons of lactone hydrolases
Q35614251Evolutionary relationships among extradiol dioxygenases
Q39503764Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.
Q24679110Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12
Q40535888Genetics and biochemistry of phenol degradation by Pseudomonas sp. CF600.
Q33987152Molecular diversity of plasmids bearing genes that encode toluene and xylene metabolism in Pseudomonas strains isolated from different contaminated sites in Belarus
Q40535913Molecular genetics and evolutionary relationship of PCB-degrading bacteria
Q33992097NahY, a catabolic plasmid-encoded receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene
Q24674776Overlapping substrate specificities of benzaldehyde dehydrogenase (the xylC gene product) and 2-hydroxymuconic semialdehyde dehydrogenase (the xylG gene product) encoded by TOL plasmid pWW0 of Pseudomonas putida
Q36900223Structural and kinetic characterization of recombinant 2-hydroxymuconate semialdehyde dehydrogenase from Pseudomonas putida G7.
Q40535883The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.
Q24684519p-Cumate catabolic pathway in Pseudomonas putida Fl: cloning and characterization of DNA carrying the cmt operon

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