Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150

scientific article published on July 1996

Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150 is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.178.13.3727-3735.1996
P932PMC publication ID232629
P698PubMed publication ID8682773

P2093author name stringMoore T
Shingler V
Sze CC
P2860cites workThe prokaryotic enhancer binding protein NTRC has an ATPase activity which is phosphorylation and DNA dependentQ24555682
Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600Q24684543
Analysis of gene control signals by DNA fusion and cloning in Escherichia coliQ29615300
Prokaryotic enhancer-binding proteins reflect eukaryote-like modularity: the puzzle of nitrogen regulatory protein CQ33367449
Isolation of the gene encoding the Hin recombinational enhancer binding proteinQ33574350
Microbial Competition: Escherichia coli Mutants That Take Over Stationary Phase CulturesQ34305902
rpoE, the gene encoding the second heat-shock sigma factor, sigma E, in Escherichia coli.Q34320811
Phospholipid alterations during growth of Escherichia coliQ35151068
Molecular analysis of a plasmid-encoded phenol hydroxylase from Pseudomonas CF600.Q35544543
The Fis protein: it's not just for DNA inversion anymoreQ35658496
Cross-regulation by XylR and DmpR activators of Pseudomonas putida suggests that transcriptional control of biodegradative operons evolves independently of catabolic genesQ35968328
An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenolsQ35983770
Carbon source-dependent inhibition of xyl operon expression of the Pseudomonas putida TOL plasmidQ36106118
Inducibility of the TOL catabolic pathway in Pseudomonas putida (pWW0) growing on succinate in continuous culture: evidence of carbon catabolite repression controlQ36106809
Growth phase variation of integration host factor level in Escherichia coliQ36108533
The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domainsQ36122459
Early and late responses of TOL promoters to pathway inducers: identification of postexponential promoters in Pseudomonas putida with lacZ-tet bicistronic reportersQ36123375
Involvement of integration host factor (IHF) in maintenance of plasmid pSC101 in Escherichia coli: characterization of pSC101 mutants that replicate in the absence of IHF.Q36175738
Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coliQ36267979
Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta cleavage pathwayQ36382584
Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteriaQ37608718
Effector-mediated stimulation of ATPase activity by the sigma 54-dependent transcriptional activator FHLA from Escherichia coliQ38295813
Expression of the genes coding for the Escherichia coli integration host factor are controlled by growth phase, rpoS, ppGpp and by autoregulationQ38302081
A carbon starvation survival gene of Pseudomonas putida is regulated by sigma 54.Q39836234
Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activatorsQ39925462
Sensing of aromatic compounds by the DmpR transcriptional activator of phenol-catabolizing Pseudomonas sp. strain CF600Q39930931
Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWW0 of Pseudomonas putida for metabolism of aromaticsQ39931654
Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR)Q39934954
Growth phase-regulated expression of bolA and morphology of stationary-phase Escherichia coli cells are controlled by the novel sigma factor sigma S.Q39942389
The regulation of transcription initiation by integration host factorQ40468930
The role of the sigma factor sigma S (KatF) in bacterial global regulationQ40572983
Promoters responsive to DNA bending: a common theme in prokaryotic gene expressionQ40693748
Signal sensing by sigma 54-dependent regulators: derepression as a control mechanismQ41130496
The phosphorylated form of the enhancer-binding protein NTRC has an ATPase activity that is essential for activation of transcriptionQ46638401
Nucleotide sequence and expression of gene nahH of plasmid NAH7 and homology with gene xylE of TOL pWWO.Q48351295
Optimization and maintenance of soluble methane monooxygenase activity in Methylosinus trichosporium OB3b.Q51640365
Involvement of sigma 54 in exponential silencing of the Pseudomonas putida TOL plasmid Pu promoter.Q54596802
The use of the luxA gene of the bacterial luciferase operon as a reporter gene.Q54738299
Analysis of Pseudomonas gene products using lacIq/Ptrp-lac plasmids and transposons that confer conditional phenotypesQ57936335
Direct regulation of the ATPase activity of the transcriptional activator DmpR by aromatic compoundsQ70893897
Genetic evidence for activation of the positive transcriptional regulator Xy1R, a member of the NtrC family of regulators, by effector bindingQ72302905
Rhizobium meliloti DctD, a sigma 54-dependent transcriptional activator, may be negatively controlled by a subdomain in the C-terminal end of its two-component receiver moduleQ72866542
P433issue13
P407language of work or nameEnglishQ1860
P304page(s)3727-3735
P577publication date1996-07-01
P1433published inJournal of BacteriologyQ478419
P1476titleGrowth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150
P478volume178

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cites work (P2860)
Q91739121Acclimation of bacterial cell state for high-throughput enzyme engineering using a DmpR-dependent transcriptional activation system
Q39714567An active role for a structured B-linker in effector control of the sigma54-dependent regulator DmpR.
Q33888214CRP interacts with promoter-bound sigma54 RNA polymerase and blocks transcriptional activation of the dctA promoter
Q39491890Carbon limitation induces sigma(S)-dependent gene expression in Pseudomonas fluorescens in soil
Q39568021Carbon-source-dependent expression of the PalkB promoter from the Pseudomonas oleovorans alkane degradation pathway.
Q35615799Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1: role of the tbuA1 promoter (PtbuA1) in the expression of its cognate activator, TbuT.
Q33889682Characterization and role of tbuX in utilization of toluene by Ralstonia pickettii PKO1
Q42607858Deciphering environmental signal integration in sigma54-dependent promoters with a simple mathematical model
Q33538615Expression systems and physiological control of promoter activity in bacteria
Q33986425Generation of novel bacterial regulatory proteins that detect priority pollutant phenols
Q39499005Genetic evidence of distinct physiological regulation mechanisms in the sigma(54) Pu promoter of Pseudomonas putida
Q39587573In vivo and in vitro effects of (p)ppGpp on the sigma(54) promoter Pu of the TOL plasmid of Pseudomonas putida.
Q39526389In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter
Q39679675Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway
Q39694558Integration of global regulation of two aromatic-responsive sigma(54)-dependent systems: a common phenotype by different mechanisms.
Q39617428Inter-sigmulon communication through topological promoter coupling
Q43921065Occurrence and properties of glutathione S-transferases in phenol-degrading Pseudomonas strains
Q39504157PhcS represses gratuitous expression of phenol-metabolizing enzymes in Comamonas testosteroni R5.
Q54492380Physiological stress of intracellular Shigella flexneri visualized with a metabolic sensor fused to a surface-reporter system.
Q33988525Role of the DmpR-mediated regulatory circuit in bacterial biodegradation properties in methylphenol-amended soils.
Q39529668Role of the crc gene in catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway.
Q33210166Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes
Q33996500The alkane hydroxylase gene of Burkholderia cepacia RR10 is under catabolite repression control
Q34166888The black cat/white cat principle of signal integration in bacterial promoters
Q40211222TouR-mediated effector-independent growth phase-dependent activation of the sigma54 Ptou promoter of Pseudomonas stutzeri OX1.
Q38305835Transcriptional organization and dynamic expression of the hbpCAD genes, which encode the first three enzymes for 2-hydroxybiphenyl degradation in Pseudomonas azelaica HBP1
Q40731615m-xylene-responsive Pu-PnifH hybrid sigma54 promoters that overcome physiological control in Pseudomonas putida KT2442.