The impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex

scientific article

The impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1002/PRO.2028
P932PMC publication ID3375441
P698PubMed publication ID22238224
P5875ResearchGate publication ID221741391

P2093author name stringHong Li
Han Zheng
Ruiying Wang
Yaming Shao
Gan Preamplume
P2860cites workA guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomesQ21090166
Evolutionary conservation of sequence and secondary structures in CRISPR repeatsQ21184123
A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of actionQ21203780
CRISPR Provides Acquired Resistance Against Viruses in ProkaryotesQ21508827
Regulatory RNAs in bacteriaQ24595082
Improved methods for building protein models in electron density maps and the location of errors in these modelsQ26776980
Processing of X-ray diffraction data collected in oscillation modeQ26778468
Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotesQ27653417
Sequence- and Structure-Specific RNA Processing by a CRISPR EndonucleaseQ27664403
Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and CleavageQ27666877
An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3Q27667849
Recognition and maturation of effector RNAs in a CRISPR interference pathwayQ27667851
Coot: model-building tools for molecular graphicsQ27860505
PHENIX: building new software for automated crystallographic structure determinationQ27861044
Small CRISPR RNAs guide antiviral defense in prokaryotesQ28290898
CRISPR/Cas, the immune system of bacteria and archaeaQ29614423
CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaeaQ29614740
RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complexQ29615785
CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNAQ29615786
Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elementsQ29615788
The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expressionQ29616445
Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal originQ29617073
CRISPR interference: RNA-directed adaptive immunity in bacteria and archaeaQ29617488
A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysisQ30669971
CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.Q33985645
The CRISPR system: small RNA-guided defense in bacteria and archaeaQ34096589
Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domainQ36458420
CRISPR-based adaptive and heritable immunity in prokaryotesQ37568446
P433issue3
P921main subjectCRISPRQ412563
P304page(s)405-417
P577publication date2012-02-09
P1433published inProtein ScienceQ7251445
P1476titleThe impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex
P478volume21

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cites work (P2860)
Q5242376392 Shaping CRISPR repeat RNA for Cleavage by Cas6 endoribonucleases.
Q36772374A Non-Stem-Loop CRISPR RNA Is Processed by Dual Binding Cas6.
Q42005996A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of clustered regularly interspaced short palindromic repeats (crispr)-derived rnas (crrnas) in Haloferax volcanii
Q26853377Biogenesis pathways of RNA guides in archaeal and bacterial CRISPR-Cas adaptive immunity
Q26824296CRISPR interference: a structural perspective
Q41995245Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis
Q41840786Comparative analysis ofCas6b processing and CRISPR RNA stability.
Q57344149Cross-cleavage activity of Cas6b in crRNA processing of two different CRISPR-Cas systems in Methanosarcina mazei Gö1
Q38282014Cutting it close: CRISPR-associated endoribonuclease structure and function
Q38454128DNA and RNA interference mechanisms by CRISPR-Cas surveillance complexes
Q34724892Essential structural and functional roles of the Cmr4 subunit in RNA cleavage by the Cmr CRISPR-Cas complex
Q27680426Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases
Q27676664Recognition and Cleavage of a Nonstructured CRISPR RNA by Its Processing Endoribonuclease Cas6
Q26998827Small RNAs for defence and regulation in archaea
Q34860823Structural Principles of CRISPR RNA Processing
Q27677046Structure of a dimeric crenarchaeal Cas6 enzyme with an atypical active site for CRISPR RNA processing
Q27676268Structure of the Cmr2-Cmr3 Subcomplex of the Cmr RNA Silencing Complex
Q38360348The Adaptive Immune System of Haloferax volcanii
Q37983037The mysterious RAMP proteins and their roles in small RNA-based immunity
Q52323301The nuts and bolts of the Haloferax CRISPR-Cas system I-B.
Q41904442Two CRISPR-Cas systems in Methanosarcina mazei strain Gö1 display common processing features despite belonging to different types I and III.