Validation of Reference Genes for Gene Expression by Quantitative Real-Time RT-PCR in Stem Segments Spanning Primary to Secondary Growth in Populus tomentosa

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Validation of Reference Genes for Gene Expression by Quantitative Real-Time RT-PCR in Stem Segments Spanning Primary to Secondary Growth in Populus tomentosa is …
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scholarly articleQ13442814

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P819ADS bibcode2016PLoSO..1157370W
P356DOI10.1371/JOURNAL.PONE.0157370
P932PMC publication ID4907450
P698PubMed publication ID27300480

P50authorHongzhi WangQ92337021
P2093author name stringYing Wang
Liping Ding
Jianhua Wei
Jiewei Zhang
Yajuan Chen
P2860cites workThe lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants.Q51887823
Reference gene selection for quantitative real-time polymerase chain reaction in Populus.Q51900504
Validation of housekeeping genes for normalizing RNA expression in real-time PCR.Q54708147
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesQ24534395
Validating internal controls for quantitative plant gene expression studiesQ24804305
The MIQE guidelines: minimum information for publication of quantitative real-time PCR experimentsQ28236560
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper – Excel-based tool using pair-wise correlationsQ29304271
Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCRQ29400573
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data setsQ29615465
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR dataQ29616810
Genome-wide transcriptome analysis of the transition from primary to secondary stem development in Populus trichocarpaQ30978904
Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR dataQ33411668
Selection of reference genes for quantitative real-time PCR expression studies in the apomictic and sexual grass Brachiaria brizanthaQ33477648
Selection of reliable reference genes for gene expression studies in peach using real-time PCRQ33484407
Evaluation of putative reference genes for gene expression normalization in soybean by quantitative real-time RT-PCR.Q33507167
Validation of reference genes for quantitative RT-PCR studies of gene expression in perennial ryegrass (Lolium perenne L.)Q33525408
Validation of reference genes for gene expression analysis in chicory (Cichorium intybus) using quantitative real-time PCR.Q33531347
Identification and validation of quantitative real-time reverse transcription PCR reference genes for gene expression analysis in teak (Tectona grandis L.f.).Q33965005
Evaluation of qPCR reference genes in two genotypes of Populus for use in photoperiod and low-temperature studiesQ34348305
Selection and validation of reference genes for gene expression analysis in apomictic and sexual Cenchrus ciliarisQ35003733
Comprehensive selection of reference genes for gene expression normalization in sugarcane by real time quantitative rt-PCR.Q35167867
Validation of reference genes for gene expression analysis in olive (Olea europaea) mesocarp tissue by quantitative real-time RT-PCRQ35177790
Developmental mechanisms regulating secondary growth in woody plantsQ36336063
Selection of reliable reference genes for gene expression studies in the biofuel plant Jatropha curcas using real-time quantitative PCRQ37421004
Transcriptional networks for lignin biosynthesis: more complex than we thought?Q37827987
On-off switches for secondary cell wall biosynthesisQ37964473
Transcriptional profiling in response to inhibition of cellulose synthesis by thaxtomin A and isoxaben in Arabidopsis thaliana suspension cellsQ38356809
Genome-wide transcriptional profiling reveals molecular signatures of secondary xylem differentiation in Populus tomentosaQ38469110
Validation of reference genes for accurate normalization of gene expression for real time-quantitative PCR in strawberry fruits using different cultivars and osmotic stresses.Q39016008
Identification and validation of reference genes for Populus euphratica gene expression analysis during abiotic stresses by quantitative real-time PCR.Q39573750
Selection of reference genes for quantitative real-time RT-PCR analysis in citrusQ39743549
The actin multigene family in Populus: organization, expression and phylogenetic analysisQ39860302
Evaluation of reference genes for accurate normalization of gene expression for real time-quantitative PCR in Pyrus pyrifolia using different tissue samples and seasonal conditions.Q41886142
Expression of glutathione S-transferases in poplar trees (Populus trichocarpa) exposed to 2,4,6-trinitrotoluene (TNT).Q46387128
Molecular changes associated with the setting up of secondary growth in aspen.Q48131447
Transcriptome profiling of vertical stem segments provides insights into the genetic regulation of secondary growth in hybrid aspen treesQ48136989
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue6
P407language of work or nameEnglishQ1860
P921main subjectPopulus tomentosaQ11127825
P304page(s)e0157370
P577publication date2016-06-14
P1433published inPLOS OneQ564954
P1476titleValidation of Reference Genes for Gene Expression by Quantitative Real-Time RT-PCR in Stem Segments Spanning Primary to Secondary Growth in Populus tomentosa
P478volume11

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cites work (P2860)
Q38613610Automated identification of reference genes based on RNA-seq data.
Q64101261Endoplasmic reticulum-localized UBC34 interaction with lignin repressors MYB221 and MYB156 regulates the transactivity of the transcription factors in Populus tomentosa
Q92093568Extensive transcriptome changes during seasonal leaf senescence in field-grown black cottonwood (Populus trichocarpa Nisqually-1)
Q90628111RNA interference suppression of AGAMOUS and SEEDSTICK alters floral organ identity and impairs floral organ determinacy, ovule differentiation, and seed-hair development in Populus
Q52597536Reference gene selection for qRT-PCR assays in Stellera chamaejasme subjected to abiotic stresses and hormone treatments based on transcriptome datasets.
Q33843601Selection and Validation of Appropriate Reference Genes for qRT-PCR Analysis in Isatis indigotica Fort
Q52660758Selection and validation of reference genes for quantitative gene expression analyses in black locust (Robinia pseudoacacia L.) using real-time quantitative PCR.

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