| scholarly article | Q13442814 |
| P50 | author | Mark A. Ragan | Q37376291 |
| P2093 | author name string | Elizabeth Skippington | |
| P2860 | cites work | Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths | Q21090212 |
| Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T | Q22065494 | ||
| Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 | Q22065980 | ||
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| Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 | Q22065995 | ||
| Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli. | Q22066206 | ||
| Genome sequence of enterohaemorrhagic Escherichia coli O157:H7 | Q22122385 | ||
| The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates | Q34803749 | ||
| How to become a uropathogen: comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains | Q35036510 | ||
| Biased gene transfer and its implications for the concept of lineage | Q35318855 | ||
| Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies | Q35550726 | ||
| Extraintestinal isolates of Escherichia coli: identification and prospects for vaccine development | Q36383799 | ||
| Getting connected: analysis and principles of biological networks | Q36808436 | ||
| The interplay of homologous recombination and horizontal gene transfer in bacterial speciation | Q37409293 | ||
| Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli | Q37608280 | ||
| Lateral genetic transfer and the construction of genetic exchange communities | Q37827559 | ||
| The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes | Q40243266 | ||
| Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69. | Q41823804 | ||
| Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. | Q42645426 | ||
| Horizontal gene transfer accelerates genome innovation and evolution. | Q45961682 | ||
| Combining metabolic engineering and metabolic evolution to develop nonrecombinant strains of Escherichia coli C that produce succinate and malate | Q46922472 | ||
| Phylogenetic distribution of extraintestinal virulence-associated traits in Escherichia coli | Q47809597 | ||
| Ecology drives a global network of gene exchange connecting the human microbiome | Q51171065 | ||
| Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method | Q51686878 | ||
| Biased gene transfer in microbial evolution | Q53085305 | ||
| Phylogenetic inference based on matrix representation of trees | Q57198760 | ||
| Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism | Q71751695 | ||
| Lateral gene transfer and the nature of bacterial innovation | Q22122396 | ||
| ProbCons: Probabilistic consistency-based multiple sequence alignment | Q24557418 | ||
| Comparison of 61 sequenced Escherichia coli genomes | Q24614300 | ||
| Lateral Transfer of Genes and Gene Fragments in Staphylococcus Extends beyond Mobile Elements | Q24625503 | ||
| Horizontal gene transfer among genomes: the complexity hypothesis | Q24651300 | ||
| Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult | Q24657628 | ||
| MRBAYES: Bayesian inference of phylogenetic trees | Q27860538 | ||
| The complete genome sequence of Escherichia coli K-12 | Q27860542 | ||
| Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis | Q27860925 | ||
| Network biology: understanding the cell's functional organization | Q27861027 | ||
| Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536 | Q27976508 | ||
| Mechanisms of, and barriers to, horizontal gene transfer between bacteria | Q28270244 | ||
| Mauve: multiple alignment of conserved genomic sequence with rearrangements | Q29547292 | ||
| Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology | Q29547502 | ||
| Phylogenetic classification and the universal tree | Q29547749 | ||
| progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement | Q29616598 | ||
| Prokaryotic evolution in light of gene transfer | Q29617350 | ||
| Phylogenetic identification of lateral genetic transfer events | Q33233711 | ||
| Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a. | Q33248973 | ||
| Evidence for horizontal gene transfer in Escherichia coli speciation | Q33290386 | ||
| Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5. | Q33360684 | ||
| Are protein domains modules of lateral genetic transfer? | Q33410818 | ||
| Intertwined evolutionary histories of marine Synechococcus and Prochlorococcus marinus | Q33633570 | ||
| Lateral transfer of genes and gene fragments in prokaryotes | Q33633619 | ||
| The tree and net components of prokaryote evolution | Q33708659 | ||
| Horizontal gene transfer and the origin of species: lessons from bacteria. | Q33856631 | ||
| Biased gene transfer mimics patterns created through shared ancestry | Q33934876 | ||
| The link between phylogeny and virulence in Escherichia coli extraintestinal infection | Q34000162 | ||
| Within-species lateral genetic transfer and the evolution of transcriptional regulation in Escherichia coli and Shigella. | Q34060765 | ||
| Highways of gene sharing in prokaryotes | Q34063510 | ||
| Lateral gene transfer | Q34177377 | ||
| Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach. | Q34507120 | ||
| Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events | Q34555802 | ||
| Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes | Q34729654 | ||
| P433 | issue | 9 | |
| P921 | main subject | Escherichia coli | Q25419 |
| phylogenetics | Q171184 | ||
| bias | Q742736 | ||
| P6104 | maintained by WikiProject | WikiProject Ecology | Q10818384 |
| P304 | page(s) | 120112 | |
| P577 | publication date | 2012-09-01 | |
| P1433 | published in | Open Biology | Q7095958 |
| P1476 | title | Phylogeny rather than ecology or lifestyle biases the construction of Escherichia coli-Shigella genetic exchange communities | |
| P478 | volume | 2 |
| Q97692828 | A New Phylogenomic Approach For Quantifying Horizontal Gene Transfer Trends in Prokaryotes |
| Q89896634 | A Systematic Approach to Bacterial Phylogeny Using Order Level Sampling and Identification of HGT Using Network Science |
| Q36660833 | Antibiotic resistance shaping multi-level population biology of bacteria |
| Q37124933 | Chemoreceptor gene loss and acquisition via horizontal gene transfer in Escherichia coli. |
| Q34493970 | Comparative Genomic and Phylogenetic Approaches to Characterize the Role of Genetic Recombination in Mycobacterial Evolution |
| Q37121783 | Exploring lateral genetic transfer among microbial genomes using TF-IDF. |
| Q55155093 | Horizontal Gene Transfer From Bacteria and Plants to the Arbuscular Mycorrhizal Fungus Rhizophagus irregularis. |
| Q38549036 | Horizontal gene transfer: building the web of life. |
| Q35651886 | Improved detection of Escherichia coli and coliform bacteria by multiplex PCR |
| Q92058476 | Native Plasmid-Encoded Mercury Resistance Genes Are Functional and Demonstrate Natural Transformation in Environmental Bacterial Isolates |
| Q38437461 | Robust Inference of Genetic Exchange Communities from Microbial Genomes Using TF-IDF. |
| Q55024282 | Short genome report of cellulose-producing commensal Escherichia coli 1094. |
| Q91727977 | Stratified reconstruction of ancestral Escherichia coli diversification |
| Q64065326 | Within-Species Genomic Variation and Variable Patterns of Recombination in the Tetracycline Producer |
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