progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement (scientific article (publication date: 25 June 2010))

cites work (P2860)

Q28817597	"Mycobacterium massilipolynesiensis" sp. nov., a rapidly-growing mycobacterium of medical interest related to Mycobacterium phlei
Q58022977	A Colicin M-Type Bacteriocin from Pseudomonas aeruginosa Targeting the HxuC Heme Receptor Requires a Novel Immunity Partner
Q36775278	A Comparative Analysis of Mitochondrial Genomes in Eustigmatophyte Algae.
Q37197007	A Coxiella-like endosymbiont is a potential vitamin source for the Lone Star tick
Q37518187	A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter.
Q97644495	A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum
Q64094405	A Human Intestinal Infection Caused by a Novel Non-O1/O139 Genotype and Its Dissemination Along the River
Q57030277	A Large Open Pangenome and a Small Core Genome for Giant Pandoraviruses
Q57816649	A Mechanism for Genome Size Reduction Following Genomic Rearrangements
Q93080733	A Novel Alphabaculovirus from the Soybean Looper, Chrysodeixis includens, that Produces Tetrahedral Occlusion Bodies and Encodes Two Copies of he65
Q37150255	A Novel Member of Chitinophagaceae Isolated from a Human Peritoneal Tumor
Q56976544	A Phylogenomic Study of Draft Genome Sequences Suggests Genetic Exchanges With Giant Viruses
Q38738769	A Primer on Infectious Disease Bacterial Genomics
Q37349225	A Prophage-Encoded Small RNA Controls Metabolism and Cell Division in Escherichia coli
Q35668080	A Rickettsia genome overrun by mobile genetic elements provides insight into the acquisition of genes characteristic of an obligate intracellular lifestyle
Q59329242	A Strain of an Emerging Indian pv. oryzae Pathotype Defeats the Rice Bacterial Blight Resistance Gene Without Inducing a Clade III Gene and Is Nearly Identical to a Recent Thai Isolate
Q36034524	A Terpene Synthase Is Involved in the Synthesis of the Volatile Organic Compound Sodorifen of Serratia plymuthica 4Rx13.
Q38792665	A Test for Gene Flow among Sympatric and Allopatric Hawaiian Picture-Winged Drosophila
Q42372353	A Thousand Fly Genomes: An Expanded Drosophila Genome Nexus
Q39591830	A barrier to homologous recombination between sympatric strains of the cooperative soil bacterium Myxococcus xanthus
Q36814083	A central metabolic circuit controlled by QseC in pathogenic Escherichia coli.
Q61454911	A comparative analysis of complete plastid genomes from and (Apiaceae)
Q57174031	A comparative analysis of the complete chloroplast genome sequences of four peanut botanical varieties
Q42122802	A comparative genomic analysis of diverse clonal types of enterotoxigenic Escherichia coli reveals pathovar-specific conservation
Q34287467	A comparison of Shiga-toxin 2 bacteriophage from classical enterohemorrhagic Escherichia coli serotypes and the German E. coli O104:H4 outbreak strain
Q34461048	A comparison of the Caulobacter NA1000 and K31 genomes reveals extensive genome rearrangements and differences in metabolic potential
Q34480779	A complete bacterial genome assembled de novo using only nanopore sequencing data
Q31154647	A ddRAD-based genetic map and its integration with the genome assembly of Japanese eel (Anguilla japonica) provides insights into genome evolution after the teleost-specific genome duplication
Q35530135	A genome-guided analysis of energy conservation in the thermophilic, cytochrome-free acetogenic bacterium Thermoanaerobacter kivui
Q44391212	A genome-wide analysis of multidrug-resistant and extensively drug-resistant strains of Mycobacterium tuberculosis Beijing genotype
Q64945132	A genome-wide scan for genes under balancing selection in the plant pathogen Ralstonia solanacearum.
Q40693880	A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior.
Q37414089	A genomic island in Vibrio cholerae with VPI-1 site-specific recombination characteristics contains CRISPR-Cas and type VI secretion modules
Q54356385	A genomic island provides Acidithiobacillus ferrooxidans ATCC 53993 additional copper resistance: a possible competitive advantage.
Q35439675	A genomic virulence reference map of Enterococcus faecalis reveals an important contribution of phage03-like elements in nosocomial genetic lineages to pathogenicity in a Caenorhabditis elegans infection model
Q39149580	A high resolution map of mammalian X chromosome fragile regions assessed by large-scale comparative genomics
Q34111313	A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution
Q39152743	A high-resolution genetic map of the cereal crown rot pathogen Fusarium pseudograminearum provides a near-complete genome assembly.
Q36395770	A highly specific phage defense system is a conserved feature of the Vibrio cholerae mobilome
Q52324290	A hybrid reference-guided de novo assembly approach for generating Cyclospora mitochondrion genomes.
Q102389077	A map of cis-regulatory elements and 3D genome structures in zebrafish
Q46509867	A maternal-effect selfish genetic element in Caenorhabditis elegans
Q34083350	A multicentre hospital outbreak in Sweden caused by introduction of a vanB2 transposon into a stably maintained pRUM-plasmid in an Enterococcus faecium ST192 clone
Q55423434	A new strategy to infer circularity applied to four new complete frog mitogenomes.
Q36267792	A new subclass of intrinsic aminoglycoside nucleotidyltransferases, ANT(3")-II, is horizontally transferred among Acinetobacter spp. by homologous recombination
Q57041119	A non-coding region near controls head colour polymorphism in the Gouldian finch
Q41490282	A novel inducible prophage from the mycosphere inhabitant Paraburkholderia terrae BS437.
Q35865965	A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii
Q35652053	A novel salt-tolerant chitobiosidase discovered by genetic screening of a metagenomic library derived from chitin-amended agricultural soil
Q37605175	A potential role of transposon IS431 in the loss of mecA gene
Q41462434	A proposed new bacteriophage subfamily: "Jerseyvirinae".
Q34463037	A single natural nucleotide mutation alters bacterial pathogen host tropism
Q36344782	A single nucleotide change in mutY increases the emergence of antibiotic-resistant Campylobacter jejuni mutants
Q51739108	A single-nucleotide insertion in a drug transporter gene induces a thermotolerant phenotype of Gluconobacter frateurii by increasing the NADPH/NADP+ ratio via metabolic change.
Q34359519	A suggested classification for two groups of Campylobacter myoviruses
Q90038693	A survey of extended-spectrum beta-lactamase-producing Enterobacteriaceae in urban wetlands in southwestern Nigeria as a step towards generating prevalence maps of antimicrobial resistance
Q52758059	A typing scheme for the honeybee pathogen Melissococcus plutonius allows detection of disease transmission events and a study of the distribution of variants.
Q35191545	A unifying model of genome evolution under parsimony
Q35220334	A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin
Q35862710	A viability-linked metagenomic analysis of cleanroom environments: eukarya, prokaryotes, and viruses
Q34237789	Abundant and diverse clustered regularly interspaced short palindromic repeat spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen
Q64115099	Accessory genome of the multi-drug resistant ocular isolate of Pseudomonas aeruginosa PA34
Q89542384	Accurate multiple alignment of distantly related genome sequences using filtered spaced word matches as anchor points
Q91793761	Achieving Accurate Sequence and Annotation Data for Caulobacter vibrioides CB13
Q35216500	Acinetobacter calcoaceticus from a fatal case of pneumonia harboring bla(NDM-1) on a widely distributed plasmid
Q30824694	Acquired resistance to innate immune clearance promotes Klebsiella pneumoniae ST258 pulmonary infection.
Q90658005	Acquisition of plasmids conferring carbapenem and aminoglycoside resistance and loss of surface-exposed macromolecule structures as strategies for the adaptation of Acinetobacter baumannii CC104O/CC15P strains to the clinical setting
Q57144831	Acquisition of resistance to carbapenem and macrolide-mediated quorum sensing inhibition by via ICE
Q46272142	Acquisition of the phosphate transporter NptA enhances Staphylococcus aureus pathogenesis by improving phosphate uptake in divergent environments.
Q44791094	Activation of R-mediated innate immunity and disease susceptibility is affected by mutations in a cytosolic O-acetylserine (thiol) lyase in Arabidopsis
Q37103418	Adaptation by Deletogenic Replication Slippage in a Nascent Symbiont
Q41606098	Adaptation of Surface-Associated Bacteria to the Open Ocean: A Genomically Distinct Subpopulation of Phaeobacter gallaeciensis Colonizes Pacific Mesozooplankton
Q38957247	Adaptation of the pathogen, Pseudomonas syringae, during experimental evolution on a native vs. alternative host plant.
Q50949475	Adaptation to copper stress influences biofilm formation in Alteromonas macleodii.
Q30824795	Adhesion of the genome-sequenced Lactococcus lactis subsp. cremoris IBB477 strain is mediated by specific molecular determinants.
Q34590504	Alignathon: a competitive assessment of whole-genome alignment methods
Q27319503	Aligning the unalignable: bacteriophage whole genome alignments
Q38695928	Alignment-free inference of hierarchical and reticulate phylogenomic relationships.
Q42281192	Alignment-free sequence comparison: benefits, applications, and tools.
Q36266806	Allelic variation contributes to bacterial host specificity.
Q31028077	An Effective Big Data Supervised Imbalanced Classification Approach for Ortholog Detection in Related Yeast Species
Q64255369	An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in
Q22121974	An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Q35174655	An alternative approach to multiple genome comparison
Q40311426	An antimicrobial peptide-resistant minor subpopulation of Photorhabdus luminescens is responsible for virulence.
Q28597724	An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH
Q30863381	An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella
Q36357641	An evolutionary link between natural transformation and CRISPR adaptive immunity
Q95576106	An in silico survey of Clostridioides difficile extrachromosomal elements
Q101133081	An integrated model system to gain mechanistic insights into biofilm-associated antimicrobial resistance in Pseudomonas aeruginosa MPAO1
Q36293969	An outbreak of respiratory tularemia caused by diverse clones of Francisella tularensis
Q35601590	Analyses of the complete genome and gene expression of chloroplast of sweet potato [Ipomoea batata]
Q36338097	Analyses of the probiotic property and stress resistance-related genes of Lactococcus lactis subsp. lactis NCDO 2118 through comparative genomics and in vitro assays
Q55634249	Analysis of 19 Highly Conserved Vibrio cholerae Bacteriophages Isolated from Environmental and Patient Sources Over a Twelve-Year Period.
Q55008005	Analysis of Theileria orientalis draft genome sequences reveals potential species-level divergence of the Ikeda, Chitose and Buffeli genotypes.
Q36118655	Analysis of a Streptococcus pyogenes puerperal sepsis cluster by use of whole-genome sequencing
Q41547433	Analysis of a long-term outbreak of XDR Pseudomonas aeruginosa: a molecular epidemiological study
Q37874671	Analysis of antibiotic resistance regions in Gram-negative bacteria
Q61445600	Analysis of genetic diversity of Xanthomonas oryzae pv. oryzae populations in Taiwan
Q34271267	Analysis of genomic rearrangements, horizontal gene transfer and role of plasmids in the evolution of industrial important Thermus species.
Q33612824	Analysis of horse genomes provides insight into the diversification and adaptive evolution of karyotype
Q93111509	Analysis of isolates from Bangladesh highlights multiple ways to carry resistance genes in Salmonella Typhi
Q43429753	Analysis of novel kitasatosporae reveals significant evolutionary changes in conserved developmental genes between Kitasatospora and Streptomyces
Q47094276	Analysis of the CRISPR-Cas system in bacteriophages active on epidemic strains of Vibrio cholerae in Bangladesh
Q34433445	Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation
Q43027049	Analysis of the complete genome sequence of the archaeon Pyrococcus chitonophagus DSM 10152 (formerly Thermococcus chitonophagus).
Q39334095	Analysis of the complete plastomes of three species of Membranoptera (Ceramiales, Rhodophyta) from Pacific North America
Q47914799	Analysis of the core genome and pangenome of Pseudomonas putida
Q53667552	Analysis of yeh Fimbrial Gene Cluster in Escherichia coli O157:H7 in Order to Find a Genetic Marker for this Serotype.
Q55004281	Analyzing AbrB-Knockout Effects through Genome and Transcriptome Sequencing of Bacillus licheniformis DW2.
Q55385543	Ancient DNA study reveals HLA susceptibility locus for leprosy in medieval Europeans.
Q37589111	Ancient bacteria of the Ötzi's microbiome: a genomic tale from the Copper Age.
Q28652206	Ancient nuclear plastid DNA in the yew family (taxaceae)
Q64253869	Aneuploidy and Ethanol Tolerance in
Q30315566	AnnoTALE: bioinformatics tools for identification, annotation, and nomenclature of TALEs from Xanthomonas genomic sequences
Q57150638	Antagonistic Pleiotropy in the Bifunctional Surface Protein FadL (OmpP1) during Adaptation of Haemophilus influenzae to Chronic Lung Infection Associated with Chronic Obstructive Pulmonary Disease
Q58757795	Approximate, simultaneous comparison of microbial genome architectures via syntenic anchoring of quiver representations
Q36301757	Aquatic adaptation of a laterally acquired pectin degradation pathway in marine gammaproteobacteria.
Q35880971	Aquifer environment selects for microbial species cohorts in sediment and groundwater
Q54959045	Arginine Catabolic Mobile Elements in Livestock-Associated Methicillin-Resistant Staphylococcal Isolates From Bovine Mastitic Milk in China.
Q35914973	As Clear as Mud? Determining the Diversity and Prevalence of Prophages in the Draft Genomes of Estuarine Isolates of Clostridium difficile
Q34217144	Assemblathon 1: a competitive assessment of de novo short read assembly methods
Q57050484	Assembly of Schizosaccharomyces cryophilus chromosomes and their comparative genomic analyses revealed principles of genome evolution of the haploid fission yeasts
Q94545277	Assessment of a Potential Role of Dickeya dadantii DSM 18020 as a Pectinase Producer for Utilization in Poultry Diets Based on in silico Analyses
Q36054391	Association of a Chromosomal Rearrangement Event with Mouse Posterior Polymorphous Corneal Dystrophy and Alterations in Csrp2bp, Dzank1, and Ovol2 Gene Expression
Q58782184	Attack of the clones: whole genome-based characterization of two closely related enterohemorrhagic Escherichia coli O26 epidemic lineages
Q36483811	Attenuation of monkeypox virus by deletion of genomic regions
Q37151178	Australian human and parrot Chlamydia psittaci strains cluster within the highly virulent 6BC clade of this important zoonotic pathogen
Q57170448	Azithromycin Resistance through Interspecific Acquisition of an Epistasis-Dependent Efflux Pump Component and Transcriptional Regulator in Neisseria gonorrhoeae
Q46717242	Bacterial sensing underlies artificial sweetener-induced growth of gut Lactobacillus.
Q90241240	Bacteriophage Application for Difficult-to-treat Musculoskeletal Infections: Development of a Standardized Multidisciplinary Treatment Protocol
Q47422584	Bacteriophage Taxonomy: An Evolving Discipline
Q93001883	Bacteriophage Therapy Testing Against Shigella flexneri in a Novel Human Intestinal Organoid-Derived Infection Model
Q36489657	Bacteriophage cocktail significantly reduces Escherichia coli O157: H7 contamination of lettuce and beef, but does not protect against recontamination
Q35048635	Balanced gene losses, duplications and intensive rearrangements led to an unusual regularly sized genome in Arbutus unedo chloroplasts.
Q36324821	Bayesian identification of bacterial strains from sequencing data
Q30614820	Beginner's guide to comparative bacterial genome analysis using next-generation sequence data
Q37264011	Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies
Q48231746	Biochemical and genetic characterization of a novel metallo-β-lactamase from marine bacterium Erythrobacter litoralis HTCC 2594.
Q37532855	Bioinformatic Analyses of Unique (Orphan) Core Genes of the Genus Acidithiobacillus: Functional Inferences and Use As Molecular Probes for Genomic and Metagenomic/Transcriptomic Interrogation
Q35679647	Bioinformatic Analysis of Chlamydia trachomatis Polymorphic Membrane Proteins PmpE, PmpF, PmpG and PmpH as Potential Vaccine Antigens
Q47249211	Bioinformatic Approaches for Comparative Analysis of Viruses
Q36525295	Bordetella pertussis Strain Lacking Pertactin and Pertussis Toxin
Q89980994	Bradyrhizobium ivorense sp. nov. as a potential local bioinoculant for Cajanus cajan cultures in Côte d'Ivoire
Q35741840	Breaking the computational barriers of pairwise genome comparison.
Q42749021	C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison
Q38613409	CONE: Community Oriented Network Estimation Is a Versatile Framework for Inferring Population Structure in Large Scale Sequencing Data.
Q34470094	CRISPR-Cas systems in the marine actinomycete Salinispora: linkages with phage defense, microdiversity and biogeography.
Q38303696	Cactus: Algorithms for genome multiple sequence alignment
Q35103634	CanSNPer: a hierarchical genotype classifier of clonal pathogens
Q34349905	Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum
Q35926998	Candidate targets of balancing selection in the genome of Staphylococcus aureus
Q28710321	Capturing the biofuel wellhead and powerhouse: the chloroplast and mitochondrial genomes of the leguminous feedstock tree Pongamia pinnata
Q47554221	Challenges of Francisella classification exemplified by an atypical clinical isolate
Q36071293	Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae.
Q55156688	Characterization and Comparative Analysis of the Complete Chloroplast Genome of the Critically Endangered Species Streptocarpus teitensis (Gesneriaceae).
Q61795742	Characterization and Genome Analysis of Podovirus CSA13 and Its Anti-Biofilm Capacity
Q90348476	Characterization and Whole Genome Sequencing of AR23, a Highly Toxic Bacillus thuringiensis Strain Isolated from Lebanese Soil
Q34414001	Characterization and comparative analysis of antibiotic resistance plasmids isolated from a wastewater treatment plant.
Q40523546	Characterization and genome sequencing of a Citrobacter freundii phage CfP1 harboring a lysin active against multidrug-resistant isolates.
Q40260786	Characterization and genomic analyses of two newly isolated Morganella phages define distant members among Tevenvirinae and Autographivirinae subfamilies
Q58707659	Characterization and induction of prophages in human gut-associated Bifidobacterium hosts
Q35005155	Characterization and phylogenetic analysis of the mitochondrial genome of Glarea lozoyensis indicates high diversity within the order Helotiales
Q88376509	Characterization of Extensively Drug-Resistant or Pandrug-Resistant Sequence Type 147 and 101 OXA-48-Producing Klebsiella pneumoniae Causing Bloodstream Infections in Patients in an Intensive Care Unit
Q42654284	Characterization of Four Multidrug Resistance Plasmids Captured from the Sediments of an Urban Coastal Wetland
Q48374693	Characterization of KPC-encoding plasmids from Enterobacteriaceae isolated in a Czech hospital.
Q40686714	Characterization of KPC-encoding plasmids from two endemic settings, Greece and Italy.
Q90454661	Characterization of NDM-Encoding Plasmids From Enterobacteriaceae Recovered From Czech Hospitals
Q89552139	Characterization of Staphylococcus intermedius Group Isolates Associated with Animals from Antarctica and Emended Description of Staphylococcus delphini
Q40890558	Characterization of a CTX-M-15 Producing Klebsiella Pneumoniae Outbreak Strain Assigned to a Novel Sequence Type (1427).
Q52593684	Characterization of a New Staphylococcus aureus Kayvirus Harboring a Lysin Active against Biofilms.
Q46358110	Characterization of a deletion in the Hsp70 cluster in the bovine reference genome
Q53789771	Characterization of a genomic island harbouring a new vanD allele from Enterococcus faecium N15-508 isolated in Canada.
Q54338939	Characterization of a mobile and multiple resistance plasmid isolated from swine manure and its detection in soil after manure application.
Q39028267	Characterization of carbapenemase-producing Enterobacteriaceae in the West Midlands region of England: 2007-14.
Q35239045	Characterization of enteropathogenic and Shiga toxin-producing Escherichia coli in cattle and deer in a shared agroecosystem
Q37713818	Characterization of invasive group B streptococcus strains from the greater Toronto area, Canada
Q99630758	Characterization of methicillin-resistant Staphylococcus aureus through genomics approach
Q31161151	Characterization of nontypable Haemophilus influenzae isolates recovered from adult patients with underlying chronic lung disease reveals genotypic and phenotypic traits associated with persistent infection.
Q41583880	Characterization of novel phages isolated in coagulase-negative staphylococci reveals evolutionary relationships with Staphylococcus aureus phages.
Q40798006	Characterization of tet(Y)-carrying LowGC plasmids exogenously captured from cow manure at a conventional dairy farm
Q48145646	Characterization of the Complete Nucleotide Sequences of IncA/C2 Plasmids Carrying In809-Like Integrons from Enterobacteriaceae Isolates of Wildlife Origin
Q35817097	Characterization of the ELPhiS prophage from Salmonella enterica serovar Enteritidis strain LK5.
Q51150983	Characterization of the complete nucleotide sequences of IMP-4-encoding plasmids, belonging to diverse Inc families, recovered from Enterobacteriaceae of wildlife origin.
Q40974027	Characterization of the emerging zoonotic pathogen Arcobacter thereius by whole genome sequencing and comparative genomics
Q42197242	Characterization of the morphology and genome of an Escherichia coli podovirus
Q62899076	Children With Cystic Fibrosis Are Infected With Multiple Subpopulations of Mycobacterium abscessus With Different Antimicrobial Resistance Profiles
Q90066010	Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
Q36255142	Chlamydia psittaci comparative genomics reveals intraspecies variations in the putative outer membrane and type III secretion system genes.
Q28829314	Chlamydiaceae Genomics Reveals Interspecies Admixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans
Q28651229	Chloroplast Genome of Novel Rice Germplasm Identified in Northern Australia
Q91767812	Chloroplast and mitochondrial genetic variation of larches at the Siberian tundra-taiga ecotone revealed by de novo assembly
Q92075110	Chloroplast genomic data provide new and robust insights into the phylogeny and evolution of the Ranunculaceae
Q61808261	Choice of assembly software has a critical impact on virome characterisation
Q30844042	Choice of reference sequence and assembler for alignment of Listeria monocytogenes short-read sequence data greatly influences rates of error in SNP analyses
Q38684795	Chromosomal features of Escherichia coli serotype O2:K2, an avian pathogenic E. coli.
Q39271154	Chromosomal inversions and ecotypic differentiation in Anopheles gambiae: the perspective from whole-genome sequencing
Q44087892	Chromosome 10 in the tomato plant carries clusters of genes responsible for field resistance/defence to Phytophthora infestans.
Q36542167	Clonal Complex 17 Group B Streptococcus strains causing invasive disease in neonates and adults originate from the same genetic pool
Q53780262	Clonality of erythromycin resistance in Francisella tularensis.
Q43021265	Cloning and expression of three ladA-type alkane monooxygenase genes from an extremely thermophilic alkane-degrading bacterium Geobacillus thermoleovorans B23.
Q92693694	Closely related viruses of the marine picoeukaryotic alga Ostreococcus lucimarinus exhibit different ecological strategies
Q54231444	ClustAGE: a tool for clustering and distribution analysis of bacterial accessory genomic elements.
Q36769396	Co-phylog: an assembly-free phylogenomic approach for closely related organisms
Q37727844	Coccolithoviruses: A Review of Cross-Kingdom Genomic Thievery and Metabolic Thuggery.
Q36775434	Coevolution between Nuclear-Encoded DNA Replication, Recombination, and Repair Genes and Plastid Genome Complexity
Q92098701	Coexistence of bla NDM-1 and rmtC on a Transferrable Plasmid of a Novel ST192 Klebsiella aerogenes Clinical Isolate
Q35960952	Coexistence of heavy metal and antibiotic resistance within a novel composite staphylococcal cassette chromosome in a Staphylococcus haemolyticus isolate from bovine mastitis milk
Q46311022	Colonic Spirochetes: What Has Genomics Taught Us?
Q61801737	Combining Strengths for Multi-genome Visual Analytics Comparison
Q34255824	Combining de novo and reference-guided assembly with scaffold_builder
Q35615013	Combining genomic sequencing methods to explore viral diversity and reveal potential virus-host interactions
Q40721853	Combining reverse-transcription multiplex PCR and microfluidic electrophoresis to simultaneously detect seven mosquito-transmitted zoonotic encephalomyelitis viruses
Q30427789	Community annotation and bioinformatics workforce development in concert--Little Skate Genome Annotation Workshops and Jamborees
Q60302078	Community-acquired methicillin-resistant from ST1 lineage harboring a new SCC IV subtype (SCC IVm) containing the gene
Q89509128	Comparative Analysis of Actaea Chloroplast Genomes and Molecular Marker Development for the Identification of Authentic Cimicifugae Rhizoma
Q41251092	Comparative Analysis of Denitrifying Activities of Hyphomicrobium nitrativorans, Hyphomicrobium denitrificans, and Hyphomicrobium zavarzinii
Q92081765	Comparative Analysis of Listeria monocytogenes Plasmids and Expression Levels of Plasmid-Encoded Genes during Growth under Salt and Acid Stress Conditions
Q40434009	Comparative Analysis of Two Helicobacter pylori Strains using Genomics and Mass Spectrometry-Based Proteomics
Q40101240	Comparative Analysis of the Flavobacterium columnare Genomovar I and II Genomes
Q35784992	Comparative Analysis of the Orphan CRISPR2 Locus in 242 Enterococcus faecalis Strains
Q91639157	Comparative Chloroplast Genomics at Low Taxonomic Levels: A Case Study Using Amphilophium (Bignonieae, Bignoniaceae)
Q47842498	Comparative DNA sequence analyses of Pyramimonas parkeae (Prasinophyceae) chloroplast genomes
Q92132563	Comparative Genome Analysis of Hungarian and Global Strains of Salmonella Infantis
Q57236213	Comparative Genome Analysis of Lactobacillus casei: Insights into Genomic Diversification for Niche Expansion
Q43072083	Comparative Genome Analysis of Two Isolates of the Fish Pathogen Piscirickettsia salmonis from Different Hosts Reveals Major Differences in Virulence-Associated Secretion Systems.
Q21559622	Comparative Genomic Analyses of Streptococcus pseudopneumoniae Provide Insight into Virulence and Commensalism Dynamics
Q89495277	Comparative Genomic Analysis Reveals the Mechanism Driving the Diversification of Plastomic Structure in Taxaceae Species
Q58758839	Comparative Genomic Analysis and Characterization of Two Serovar Enteritidis Isolates From Poultry With Notably Different Survival Abilities in Egg Whites
Q64059370	Comparative Genomic Analysis of : An Overview
Q35685346	Comparative Genomic Analysis of Asian Haemorrhagic Septicaemia-Associated Strains of Pasteurella multocida Identifies More than 90 Haemorrhagic Septicaemia-Specific Genes
Q89517819	Comparative Genomic Analysis of Closely Related Acetobacter pasteurianus Strains Provides Evidence of Horizontal Gene Transfer and Reveals Factors Necessary for Thermotolerance
Q55085052	Comparative Genomic Analysis of Holospora spp., Intranuclear Symbionts of Paramecia.
Q28550422	Comparative Genomic Analysis of Mannheimia haemolytica from Bovine Sources
Q38685171	Comparative Genomic Characterization of the Highly Persistent and Potentially Virulent Cronobacter sakazakii ST83, CC65 Strain H322 and Other ST83 Strains
Q27325753	Comparative Genomic Insights into Ecophysiology of Neutrophilic, Microaerophilic Iron Oxidizing Bacteria
Q55505747	Comparative Genomics Provides Insights Into the Marine Adaptation in Sponge-Derived Kocuriaflava S43.
Q90440330	Comparative Genomics Reveals a Well-Conserved Intrinsic Resistome in the Emerging Multidrug-Resistant Pathogen Cupriavidus gilardii
Q55084632	Comparative Genomics and Biosynthetic Potential Analysis of Two Lichen-Isolated Amycolatopsis Strains.
Q58580513	Comparative Genomics and Infection of Field Clonal Isolates of Biovar 3 Did Not Identify Signature of Host Adaptation
Q90430137	Comparative Genomics and Phylogenetic Analysis Revealed the Chloroplast Genome Variation and Interspecific Relationships of Corylus (Betulaceae) Species
Q90400881	Comparative Genomics and Phylogenomic Analysis of the Genus Salinivibrio
Q37351351	Comparative Genomics and Systems Biology of Malaria Parasites Plasmodium
Q59136359	Comparative Genomics of - Dual Endosymbiosis in a Plant-Parasitic Nematode
Q55389596	Comparative Genomics of Lactobacillus acidipiscis ACA-DC 1533 Isolated From Traditional Greek Kopanisti Cheese Against Species Within the Lactobacillus salivarius Clade.
Q90345077	Comparative Genomics of Pediococcus pentosaceus Isolated From Different Niches Reveals Genetic Diversity in Carbohydrate Metabolism and Immune System
Q58556896	Comparative Genomics of S and L Morphotypes Yield Insights into Niche Adaptation
Q36429384	Comparative Genomics of Sibling Fungal Pathogenic Taxa Identifies Adaptive Evolution without Divergence in Pathogenicity Genes or Genomic Structure
Q92757819	Comparative Genomics of Streptococcus thermophilus Support Important Traits Concerning the Evolution, Biology and Technological Properties of the Species
Q36983148	Comparative Genomics of Two Closely Related Wolbachia with Different Reproductive Effects on Hosts
Q28611269	Comparative Genomics of a Plant-Parasitic Nematode Endosymbiont Suggest a Role in Nutritional Symbiosis
Q58604215	Comparative Genomics of the First and Complete Genome of "" Supports the Novel Species Hypothesis
Q37604078	Comparative Genomics of the Zoonotic Pathogen Ehrlichia chaffeensis Reveals Candidate Type IV Effectors and Putative Host Cell Targets
Q38616726	Comparative Sequence Analysis of Multidrug-Resistant IncA/C Plasmids from Salmonella enterica
Q58797160	Comparative Transcriptomic Analysis of TH1436 and TH1477 Showing Different Capability in the Use of Galactose
Q31070623	Comparative analyses of chloroplast genome data representing nine green algae in Sphaeropleales (Chlorophyceae, Chlorophyta)
Q33804512	Comparative analysis and supragenome modeling of twelve Moraxella catarrhalis clinical isolates.
Q36756597	Comparative analysis of Chlamydia psittaci genomes reveals the recent emergence of a pathogenic lineage with a broad host range.
Q90353059	Comparative analysis of Chlorosarcinopsis eremi mitochondrial genome with some Chlamydomonadales algae
Q92994062	Comparative analysis of apicoplast genomes of Babesia infective to small ruminants in China
Q89769045	Comparative analysis of chloroplast genomes for five Dicliptera species (Acanthaceae): molecular structure, phylogenetic relationships, and adaptive evolution
Q116673547	Comparative analysis of chloroplast genomes of Sanguisorba species and insights into phylogenetic implications and molecular dating
Q33669114	Comparative analysis of mitochondrial genomes between the hau cytoplasmic male sterility (CMS) line and its iso-nuclear maintainer line in Brassica juncea to reveal the origin of the CMS-associated gene orf288
Q35064271	Comparative analysis of super-shedder strains of Escherichia coli O157:H7 reveals distinctive genomic features and a strongly aggregative adherent phenotype on bovine rectoanal junction squamous epithelial cells
Q46247493	Comparative analysis of the Burkholderia cenocepacia K56-2 essential genome reveals cell envelope functions that are uniquely required for survival in species of the genus Burkholderia
Q41824709	Comparative analysis of the complete genome of KPC-2-producing Klebsiella pneumoniae Kp13 reveals remarkable genome plasticity and a wide repertoire of virulence and resistance mechanisms
Q34978334	Comparative analysis of the complete genome of an epidemic hospital sequence type 203 clone of vancomycin-resistant Enterococcus faecium
Q36281578	Comparative analysis of the mitochondrial genomes of Colletotrichum gloeosporioides sensu lato: insights into the evolution of a fungal species complex interacting with diverse plants
Q64104267	Comparative analysis reveals conservation in genome organization among intestinal Cryptosporidium species and sequence divergence in potential secreted pathogenesis determinants among major human-infecting species
Q61446253	Comparative analysis reveals the Genomic Islands in Pasteurella multocida population genetics: on Symbiosis and adaptability
Q34402232	Comparative and genetic analysis of the four sequenced Paenibacillus polymyxa genomes reveals a diverse metabolism and conservation of genes relevant to plant-growth promotion and competitiveness
Q42553867	Comparative assembly hubs: web-accessible browsers for comparative genomics
Q35598148	Comparative genome analyses of Serratia marcescens FS14 reveals its high antagonistic potential
Q41762433	Comparative genome analysis of Lactobacillus casei strains isolated from Actimel and Yakult products reveals marked similarities and points to a common origin.
Q46666887	Comparative genome analysis of Lysinibacillus B1-CDA, a bacterium that accumulates arsenics
Q35746800	Comparative genome analysis of Mycoplasma pneumoniae
Q42220191	Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds
Q31033487	Comparative genome analysis of Weissella ceti, an emerging pathogen of farm-raised rainbow trout.
Q60302706	Comparative genome analysis of marine purple sulfur bacterium Marichromatium gracile YL28 reveals the diverse nitrogen cycle mechanisms and habitat-specific traits
Q33764142	Comparative genome analysis of pathogenic and non-pathogenic Clavibacter strains reveals adaptations to their lifestyle
Q57148953	Comparative genome analysis provides deep insights into Aeromonas hydrophila taxonomy and virulence-related factors
Q48325945	Comparative genome and phenotypic analysis of three Clostridioides difficile strains isolated from a single patient provide insight into multiple infection of C. difficile
Q33786619	Comparative genome and transcriptome analysis reveals distinctive surface characteristics and unique physiological potentials of Pseudomonas aeruginosa ATCC 27853
Q50923935	Comparative genome characterization of Achromobacter members reveals potential genetic determinants facilitating the adaptation to a pathogenic lifestyle.
Q89661724	Comparative genome characterization of the periodontal pathogen Tannerella forsythia
Q64064944	Comparative genome sequencing and analyses of Mycobacterium cosmeticum reveal potential for biodesulfization of gasoline
Q34565854	Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens
Q40105957	Comparative genome-wide analysis reveals that Burkholderia contaminans MS14 possesses multiple antimicrobial biosynthesis genes but not major genetic loci required for pathogenesis.
Q35945124	Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia
Q36558658	Comparative genomic analysis and benzene, toluene, ethylbenzene, and o-, m-, and p-xylene (BTEX) degradation pathways of Pseudoxanthomonas spadix BD-a59.
Q33696325	Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals
Q33605936	Comparative genomic analysis between Corynebacterium pseudotuberculosis strains isolated from buffalo
Q92148989	Comparative genomic analysis identifies X-factor (haemin)-independent Haemophilus haemolyticus: a formal re-classification of 'Haemophilus intermedius'
Q37167726	Comparative genomic analysis of Brazilian Leptospira kirschneri serogroup Pomona serovar Mozdok
Q37712963	Comparative genomic analysis of KPC-encoding pKpQIL-like plasmids and their distribution in New Jersey and New York Hospitals
Q47250257	Comparative genomic analysis of Lactobacillus mucosae LM1 identifies potential niche-specific genes and pathways for gastrointestinal adaptation.
Q64916553	Comparative genomic analysis of Myroides odoratimimus isolates.
Q59790913	Comparative genomic analysis of Parageobacillus thermoglucosidasius strains with distinct hydrogenogenic capacities
Q58562728	Comparative genomic analysis of Pseudomonas amygdali pv. lachrymans NM002: Insights into its potential virulence genes and putative invasion determinants
Q34057381	Comparative genomic analysis of Streptococcus suis reveals significant genomic diversity among different serotypes
Q38958195	Comparative genomic analysis of Xanthomonas axonopodis pv. citrumelo F1, which causes citrus bacterial spot disease, and related strains provides insights into virulence and host specificity
Q35608077	Comparative genomic analysis of a multiple antimicrobial resistant enterotoxigenic E. coli O157 lineage from Australian pigs.
Q35059851	Comparative genomic analysis of clinical and environmental strains provides insight into the pathogenicity and evolution of Vibrio parahaemolyticus
Q36098343	Comparative genomic analysis of duplicated homoeologous regions involved in the resistance of Brassica napus to stem canker
Q37838935	Comparative genomic analysis of human Chlamydia pneumoniae isolates from respiratory, brain and cardiac tissues
Q33696398	Comparative genomic analysis of malaria mosquito vector-associated novel pathogen Elizabethkingia anophelis
Q36757203	Comparative genomic analysis of phylogenetically closely related Hydrogenobaculum sp. isolates from Yellowstone National Park
Q36905255	Comparative genomic analysis of rapid evolution of an extreme-drug-resistant Acinetobacter baumannii clone
Q40164869	Comparative genomic analysis of the swine pathogen Bordetella bronchisepticastrain KM22.
Q42595177	Comparative genomic analysis of twelve Streptococcus suis (pro)phages
Q36560243	Comparative genomic and functional analysis reveal conservation of plant growth promoting traits in Paenibacillus polymyxa and its closely related species.
Q58085053	Comparative genomic and methylome analysis of non-virulent D74 and virulent Nagasaki Haemophilus parasuis isolates
Q42119278	Comparative genomic and transcriptomic analyses reveal habitat differentiation and different transcriptional responses during pectin metabolism in Alishewanella species
Q37614476	Comparative genomics analysis of Lactobacillus species associated with weight gain or weight protection
Q91886088	Comparative genomics analysis of Mycoplasma capricolum subsp. capripneumoniae 87001
Q40896403	Comparative genomics and genome biology of invasive Campylobacter jejuni
Q27317063	Comparative genomics and metabolic profiling of the genus Lysobacter
Q36377423	Comparative genomics and stx phage characterization of LEE-negative Shiga toxin-producing Escherichia coli
Q34079190	Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions
Q40075687	Comparative genomics of Australian and international isolates of Salmonella Typhimurium: correlation of core genome evolution with CRISPR and prophage profiles
Q36970503	Comparative genomics of Bifidobacterium animalis subsp. lactis reveals a strict monophyletic bifidobacterial taxon
Q33806374	Comparative genomics of Bradyrhizobium japonicum CPAC 15 and Bradyrhizobium diazoefficiens CPAC 7: elite model strains for understanding symbiotic performance with soybean
Q36353545	Comparative genomics of Burkholderia multivorans, a ubiquitous pathogen with a highly conserved genomic structure
Q36300004	Comparative genomics of Enterococcus spp. isolated from bovine feces
Q42373909	Comparative genomics of Lactobacillus kefiranofaciens ZW3 and related members of Lactobacillus. spp reveal adaptations to dairy and gut environments
Q36010457	Comparative genomics of Pseudomonas syringae pv. syringae strains B301D and HS191 and insights into intrapathovar traits associated with plant pathogenesis
Q64136872	Comparative genomics of Salmonella enterica serovar Montevideo reveals lineage-specific gene differences that may influence ecological niche association
Q31042496	Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus.
Q35847274	Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa
Q34671940	Comparative genomics of Wolbachia and the bacterial species concept
Q36512666	Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence
Q34474862	Comparative genomics of bacteria in the genus Providencia isolated from wild Drosophila melanogaster
Q57799883	Comparative genomics of clinical strains of Pseudomonas aeruginosa strains isolated from different geographic sites
Q21266657	Comparative genomics of closely related Salmonella enterica serovar Typhi strains reveals genome dynamics and the acquisition of novel pathogenic elements
Q37485128	Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7
Q33637918	Comparative genomics of human and non-human Listeria monocytogenes sequence type 121 strains
Q21266644	Comparative genomics of koala, cattle and sheep strains of Chlamydia pecorum
Q33857867	Comparative genomics of methicillin-resistant Staphylococcus aureus ST239: distinct geographical variants in Beijing and Hong Kong
Q92928218	Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants
Q40507596	Comparative genomics of non-pseudomonal bacterial species colonising paediatric cystic fibrosis patients
Q98939497	Comparative genomics of ocular Pseudomonas aeruginosa strains from keratitis patients with different clinical outcomes
Q30855343	Comparative genomics of planktonic Flavobacteriaceae from the Gulf of Maine using metagenomic data
Q34032781	Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions
Q33405438	Comparative genomics of recent Shiga toxin-producing Escherichia coli O104:H4: short-term evolution of an emerging pathogen
Q36001229	Comparative genomics of rhizobia nodulating soybean suggests extensive recruitment of lineage-specific genes in adaptations
Q21266694	Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens
Q33732225	Comparative genomics of the dairy isolate Streptococcus macedonicus ACA-DC 198 against related members of the Streptococcus bovis/Streptococcus equinus complex
Q46171521	Comparative genomics of the pine pathogens and beetle symbionts in the genus Grosmannia
Q34866432	Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal
Q42144789	Comparative genomics of two independently enriched "candidatus kuenenia stuttgartiensis" anammox bacteria
Q38644293	Comparative genomics of two super-shedder isolates of Escherichia coli O157:H7.
Q36231088	Comparative genomics provides a timeframe for Wolbachia evolution and exposes a recent biotin synthesis operon transfer
Q34259748	Comparative genomics reveals adaptation by Alteromonas sp. SN2 to marine tidal-flat conditions: cold tolerance and aromatic hydrocarbon metabolism
Q49207699	Comparative genomics reveals new single-nucleotide polymorphisms that can assist in identification of adherent-invasive Escherichia coli.
Q64113094	Comparative genomics reveals structural and functional features specific to the genome of a foodborne Escherichia coli O157:H7
Q21559475	Comparative population genomics of the Borrelia burgdorferi species complex reveals high degree of genetic isolation among species and underscores benefits and constraints to studying intra-specific epidemiological processes
Q36207209	Comparative sequence analysis of Cyclospora cayetanensis apicoplast genomes originating from diverse geographical regions
Q36505356	Comparative sequence analysis of a multidrug-resistant plasmid from Aeromonas hydrophila.
Q58095212	Comparative study on mitogenomes of green tide algae
Q58780878	Comparison of Highly and Weakly Virulent Strains, With a View on the Pangenome and Panregulon of This Species
Q90155465	Comparison of core-genome MLST, coreSNP and PFGE methods for Klebsiella pneumoniae cluster analysis
Q92341023	Comparison of different technologies for the decipherment of the whole genome sequence of Campylobacter jejuni BfR-CA-14430
Q27323248	Comparison of genome sequencing technology and assembly methods for the analysis of a GC-rich bacterial genome
Q37145149	Comparison of metabolic capacities and inference of gene content evolution in mosquito-associated Spiroplasma diminutum and S. taiwanense
Q33755860	Comparison of molecular serotyping approaches of Streptococcus agalactiae from genomic sequences
Q33617186	Comparison of single-molecule sequencing and hybrid approaches for finishing the genome of Clostridium autoethanogenum and analysis of CRISPR systems in industrial relevant Clostridia
Q34577603	Comparisons of infant Escherichia coli isolates link genomic profiles with adaptation to the ecological niche
Q41870270	Compensation of the metabolic costs of antibiotic resistance by physiological adaptation in Escherichia coli
Q89769492	Complete Chloroplast Genome Sequence of Chinese Lacquer Tree (Toxicodendron vernicifluum, Anacardiaceae) and Its Phylogenetic Significance
Q52564144	Complete Chloroplast Genome of Cercis chuniana (Fabaceae) with Structural and Genetic Comparison to Six Species in Caesalpinioideae.
Q28633057	Complete Chloroplast Genome of the Wollemi Pine (Wollemia nobilis): Structure and Evolution
Q38629487	Complete Genome Analysis of Thermus parvatiensis and Comparative Genomics of Thermus spp. Provide Insights into Genetic Variability and Evolution of Natural Competence as Strategic Survival Attributes
Q64249851	Complete Genome Sequence Analysis and Characterization of Selected Iron Regulation Genes of Serotype A Strain
Q46256686	Complete Genome Sequence Analysis of Enterobacter sp. SA187, a Plant Multi-Stress Tolerance Promoting Endophytic Bacterium
Q46050637	Complete Genome Sequence and Comparative Analysis of Staphylococcus condimenti DSM 11674, a Potential Starter Culture Isolated from Soy Sauce Mash
Q38543987	Complete Genome Sequence for the Fusarium Head Blight Antagonist Bacillus amyloliquefaciens Strain TrigoCor 1448.
Q41980857	Complete Genome Sequence of Acinetobacter calcoaceticus CA16, a Bacterium Capable of Degrading Diesel and Lignin
Q92915844	Complete Genome Sequence of Agrobacterium tumefaciens Myophage Milano
Q41827410	Complete Genome Sequence of Bacillus toyonensis BCT-7112T, the Active Ingredient of the Feed Additive Preparation Toyocerin.
Q41038341	Complete Genome Sequence of Bifidobacterium longum GT15: Identification and Characterization of Unique and Global Regulatory Genes
Q40188468	Complete Genome Sequence of Bluetongue Virus Serotype 8, Which Reemerged in France in August 2015.
Q30275932	Complete Genome Sequence of Bordetella pertussis Strain VA-190 Isolated from a Vaccinated 10-Year-Old Patient with Whooping Cough
Q38735343	Complete Genome Sequence of Burkholderia cenocepacia CR318, a Phosphate-Solubilizing Bacterium Isolated from Corn Root
Q88873991	Complete Genome Sequence of Cd(II)-Resistant Arthrobacter sp. PGP41, a Plant Growth-Promoting Bacterium with Potential in Microbe-Assisted Phytoremediation
Q90376716	Complete Genome Sequence of Clostridium kluyveri JZZ Applied in Chinese Strong-Flavor Liquor Production
Q36323214	Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain E19, Isolated from a Horse in Chile
Q90090190	Complete Genome Sequence of Escherichia coli BL21-AI
Q55037207	Complete Genome Sequence of Escherichia coli J53, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments.
Q55434083	Complete Genome Sequence of Escherichia coli ME8067, an Azide-Resistant Laboratory Strain Used for Conjugation Experiments.
Q90182536	Complete Genome Sequence of Escherichia coli Myophage Mangalitsa
Q90182532	Complete Genome Sequence of Escherichia coli Myophage Mansfield
Q92571211	Complete Genome Sequence of Escherichia coli Myophage Minorna
Q90638409	Complete Genome Sequence of Escherichia coli Phage Paul
Q90316828	Complete Genome Sequence of Escherichia coli Phage Pisces
Q90316835	Complete Genome Sequence of Escherichia coli Podophage Peacock
Q90182556	Complete Genome Sequence of Escherichia coli Podophage Penshu1
Q90316823	Complete Genome Sequence of Escherichia coli Siphophage Schulenberg
Q90182546	Complete Genome Sequence of Escherichia coli Siphophage Sciku
Q90466048	Complete Genome Sequence of Escherichia coli Siphophage Shashou
Q90466071	Complete Genome Sequence of Escherichia coli Siphophage Snoke
Q90383401	Complete Genome Sequence of Ferriphaselus amnicola Strain OYT1, a Neutrophilic, Stalk-Forming, Iron-Oxidizing Bacterium
Q34580598	Complete Genome Sequence of Francisella endociliophora Strain FSC1006, Isolated from a Laboratory Culture of the Marine Ciliate Euplotes raikovi
Q35389199	Complete Genome Sequence of Francisella guangzhouensis Strain 08HL01032T, Isolated from Air-Conditioning Systems in China
Q34633526	Complete Genome Sequence of Haemophilus influenzae Strain 375 from the Middle Ear of a Pediatric Patient with Otitis Media
Q60912663	Complete Genome Sequence of Hypervirulent Streptococcus pyogenes3 Strain 1838
Q90316820	Complete Genome Sequence of Klebsiella pneumoniae Myophage Magnus
Q64060334	Complete Genome Sequence of Klebsiella pneumoniae Myophage May
Q64089668	Complete Genome Sequence of Klebsiella pneumoniae Myophage Menlow
Q64089613	Complete Genome Sequence of Klebsiella pneumoniae Myophage Mineola
Q90316800	Complete Genome Sequence of Klebsiella pneumoniae Phage Sweeny
Q64281457	Complete Genome Sequence of Klebsiella pneumoniae Podophage Patroon
Q59803118	Complete Genome Sequence of Klebsiella pneumoniae Siphophage Sugarland
Q42379988	Complete Genome Sequence of Lactobacillus acidophilus Strain ATCC 53544.
Q37406366	Complete Genome Sequence of Lactococcus lactis subsp. lactis KLDS4.0325.
Q36990543	Complete Genome Sequence of Mycobacterium abscessus subsp. bolletii
Q33586982	Complete Genome Sequence of Mycobacterium avium subsp. hominissuis Strain H87 Isolated from an Indoor Water Sample
Q41117724	Complete Genome Sequence of Mycobacterium chimaera SJ42, a Nonoutbreak Strain from an Immunocompromised Patient with Pulmonary Disease
Q37438517	Complete Genome Sequence of Mycobacterium chimaera Strain AH16.
Q40107458	Complete Genome Sequence of Mycobacteriumchimaera Strain CDC2015-22-71.
Q37662805	Complete Genome Sequence of Mycoplasma pneumoniae Type 2 Reference Strain FH Using Single-Molecule Real-Time Sequencing Technology.
Q89453639	Complete Genome Sequence of Myophage Ec_Makalu_002, Which Infects Uropathogenic Escherichia coli
Q36573706	Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
Q43098049	Complete Genome Sequence of Probiotic Strain Lactobacillus acidophilus La-14.
Q90638414	Complete Genome Sequence of Proteus mirabilis Siphophage Saba
Q90182525	Complete Genome Sequence of Salmonella enterica Myophage Matapan
Q64060306	Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Myophage Mutine
Q64071330	Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Siskin
Q91592869	Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Skate
Q90316787	Complete Genome Sequence of Salmonella enterica Siphophage Shelanagig
Q89581736	Complete Genome Sequence of Salmonella enterica Siphophage Shemara
Q42113334	Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Thompson Strain RM6836.
Q92379923	Complete Genome Sequence of Serratia Phage Muldoon
Q92000852	Complete Genome Sequence of Serratia marcescens Myophage Moabite
Q90182540	Complete Genome Sequence of Serratia marcescens Myophage MyoSmar
Q92915837	Complete Genome Sequence of Serratia marcescens Phage MTx
Q91592877	Complete Genome Sequence of Serratia marcescens Podophage Parlo
Q92379929	Complete Genome Sequence of Serratia marcescens Podophage Pila
Q64060296	Complete Genome Sequence of Serratia marcescens Siphophage Scapp
Q64060292	Complete Genome Sequence of Serratia marcescens Siphophage Serbin
Q92379935	Complete Genome Sequence of Serratia marcescens Siphophage Slocum
Q90182528	Complete Genome Sequence of Shelby, a Siphophage Infecting Carbapenemase-Producing Klebsiella pneumoniae
Q90316810	Complete Genome Sequence of Sin4, a Siphophage Infecting Carbapenemase-Producing Klebsiella pneumoniae
Q90383457	Complete Genome Sequence of Sinorhizobium Phage ΦM6, the First Terrestrial Phage of a Marine Phage Group
Q41560481	Complete Genome Sequence of Staphylococcus aureus MCRF184, a Necrotizing Fasciitis-Causing Methicillin-Sensitive Sequence Type 45 Staphylococcus Strain
Q90466066	Complete Genome Sequence of Staphylococcus aureus Myophage Maine
Q92000872	Complete Genome Sequence of Staphylococcus aureus Siphophage Sebago
Q37168202	Complete Genome Sequence of Staphylococcus aureus Tager 104, a Sequence Type 49 Ancestor
Q92379916	Complete Genome Sequence of Stenotrophomonas Phage Mendera
Q92379941	Complete Genome Sequence of Stenotrophomonas maltophilia Myophage Moby
Q90316781	Complete Genome Sequence of Stenotrophomonas maltophilia Podophage Ponderosa
Q37388488	Complete Genome Sequence of Streptococcus pneumoniae Strain A026, a Clinical Multidrug-Resistant Isolate Carrying Tn2010.
Q61444093	Complete Genome Sequence of Vibrio campbellii DS40M4
Q90466096	Complete Genome Sequence of Vibrio natriegens Phage Phriendly
Q90316773	Complete Genome Sequence of Xanthomonas Phage Pagan
Q55209151	Complete Genome Sequence of a Ciprofloxacin-Resistant Salmonella enterica subsp. enterica Serovar Kentucky Sequence Type 198 Strain, PU131, Isolated from a Human Patient in Washington State.
Q52678363	Complete Genome Sequence of a New Zealand Isolate of the Bovine Pathogen Streptococcus uberis.
Q90090140	Complete Genome Sequence of an Alphabaculovirus from Choristoneura diversana
Q35801260	Complete Genome Sequence of the Acetogenic Bacterium Moorella thermoacetica DSM 2955T
Q39599155	Complete Genome Sequence of the MRSA Isolate HC1335 from ST239 Lineage Displaying a Truncated AgrC Histidine Kinase Receptor
Q35564669	Complete Genome Sequence of the Nitrogen-Fixing and Solvent-Producing Clostridium pasteurianum DSM 525
Q92000859	Complete Genome Sequence of the Novel Klebsiella pneumoniae Phage Marfa
Q41833516	Complete Genome Sequence of the Streptococcus sp. Strain VT 162, Isolated from the Saliva of Pediatric Oncohematology Patients
Q35801266	Complete Genome Sequence of the Type Strain of the Acetogenic Bacterium Moorella thermoacetica DSM 521T
Q41519598	Complete Genome Sequence of the Yogurt Isolate Lactobacillus delbrueckii subsp. bulgaricus ACA-DC 87.
Q42355737	Complete Genome Sequence of vB_EcoM-UFV13, a New Bacteriophage Able To Disrupt Trueperella pyogenes Biofilm.
Q41162432	Complete Genome Sequences of 17 Rapidly Growing Nontuberculous Mycobacterial Strains
Q41460739	Complete Genome Sequences of Bordetella flabilis, Bordetella bronchialis, and "Bordetella pseudohinzii".
Q59803198	Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
Q39395557	Complete Genome Sequences of Lactobacillus johnsonii Strain N6.2 and Lactobacillus reuteri Strain TD1.
Q93086922	Complete Genome Sequences of Staphylococcus epidermidis Myophages Quidividi, Terranova, and Twillingate
Q34948706	Complete Genome Sequences of T4-Like Bacteriophages RB3, RB5, RB6, RB7, RB9, RB10, RB27, RB33, RB55, RB59, and RB68
Q33695062	Complete Genome Sequences of Two Acetic Acid-Producing Acetobacter pasteurianus Strains (Subsp. ascendens LMG 1590T and Subsp. paradoxus LMG 1591T).
Q55258658	Complete Genome Sequences of Two Bioluminescent Vibrio campbellii Strains Isolated from Biofouling Communities in the Bay of Bengal.
Q40299119	Complete Genome Sequences of Two Outbreak Strains of Salmonella enterica subsp. enterica Serovar Thompson Associated with Cilantro.
Q40429728	Complete Genome Sequences of Two Strains of "Candidatus Filomicrobium marinum," a Methanesulfonate-Degrading Species.
Q64085591	Complete Genome Sequences of Xanthomonas axonopodis pv. glycines Isolates from the United States and Thailand Reveal Conserved Transcription Activator-Like Effectors
Q37506188	Complete Genome Sequencing and Comparative Genomic Analysis of the Thermotolerant Acetic Acid Bacterium, Acetobacter pasteurianus SKU1108, Provide a New Insight into Thermotolerance
Q57071026	Complete Genome of the Specific Bacteriophage KΦ1, Its Survival and Potential in Control of Pepper Bacterial Spot
Q42066868	Complete Genomic Sequence of an Avian Pathogenic Escherichia coli Strain of Serotype O7:HNT
Q95840917	Complete Mitochondrial Genome of the Fungal Biocontrol Agent Trichoderma atroviride: Genomic Features, Comparative Analysis and Insight Into the Mitochondrial Evolution in Trichoderma
Q55006510	Complete Nucleotide Sequence Analysis of a Novel Bacillus subtilis-Infecting Bacteriophage BSP10 and Its Effect on Poly-Gamma-Glutamic Acid Degradation.
Q41118168	Complete Nucleotide Sequence of Klebsiella pneumoniae Bacteriophage vB_KpnM_KpV477.
Q41662476	Complete Nucleotide Sequence of a Citrobacter freundii Plasmid Carrying KPC-2 in a Unique Genetic Environment
Q92446885	Complete Sequence of Succinamopine Ti-Plasmid pTiEU6 Reveals Its Evolutionary Relatedness with Nopaline-Type Ti-Plasmids
Q55406492	Complete and Draft Genome Sequences of Nine Lactobacillus sakei Strains Selected from the Three Known Phylogenetic Lineages and Their Main Clonal Complexes.
Q40165952	Complete chloroplast genome of Ficus racemosa (Moraceae).
Q38634338	Complete chloroplast genome of green tide algae Ulva flexuosa (Ulvophyceae, Chlorophyta) with comparative analysis
Q46516189	Complete chloroplast genome sequences of Solanum commersonii and its application to chloroplast genotype in somatic hybrids with Solanum tuberosum.
Q28534226	Complete genome analysis of three Acinetobacter baumannii clinical isolates in China for insight into the diversification of drug resistance elements
Q67228712	Complete genome and plasmid sequence of a novel sp. BD59S, a parasporal protein synthesizing bacterium
Q35945516	Complete genome of Staphylococcus aureus Tager 104 provides evidence of its relation to modern systemic hospital-acquired strains
Q36316679	Complete genome sequence analysis of a novel Staphylococcus phage StAP1 and proposal of a new species in the genus Silviavirus.
Q40693595	Complete genome sequence and comparative genome analysis of a new special Yersinia enterocolitica
Q89817062	Complete genome sequence and genome-scale metabolic modelling of Acinetobacter baumannii type strain ATCC 19606
Q41172665	Complete genome sequence of Actinobacillus suis H91-0380, a virulent serotype O2 strain
Q34308703	Complete genome sequence of Bacillus subtilis strain QB928, a strain widely used in B. subtilis genetic studies
Q35583668	Complete genome sequence of Borrelia afzelii K78 and comparative genome analysis
Q34329494	Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes
Q41850665	Complete genome sequence of Lactococcus lactis subsp. cremoris A76.
Q36601409	Complete genome sequence of Liberibacter crescens BT-1.
Q41190500	Complete genome sequence of Pseudomonas citronellolis P3B5, a candidate for microbial phyllo-remediation of hydrocarbon-contaminated sites.
Q34216077	Complete genome sequence of Rickettsia heilongjiangensis, an emerging tick-transmitted human pathogen
Q35848477	Complete genome sequence of Staphylococcus aureus, strain ILRI_Eymole1/1, isolated from a Kenyan dromedary camel
Q42859452	Complete genome sequence of a mosaic bacteriophage, waukesha92.
Q34107827	Complete genome sequence of a plant associated bacterium Bacillus amyloliquefaciens subsp. plantarum UCMB5033.
Q35687201	Complete genome sequence of a porcine epidemic diarrhea s gene indel strain isolated in france in december 2014.
Q35880191	Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E
Q37498833	Complete genome sequence of new bacteriophage phiE142, which causes simultaneously lysis of multidrug-resistant Escherichia coli O157:H7 and Salmonella enterica
Q35552078	Complete genome sequence of the Clostridium difficile laboratory strain 630Δerm reveals differences from strain 630, including translocation of the mobile element CTn5.
Q42792855	Complete genome sequence of the commensal Enterococcus faecalis 62, isolated from a healthy Norwegian infant
Q34314997	Complete genome sequence of the frog pathogen Mycobacterium ulcerans ecovar Liflandii
Q36276388	Complete genome sequence of the porcine isolate Enterococcus faecalis D32.
Q36790630	Complete genome sequences of Francisella noatunensis subsp. orientalis strains FNO12, FNO24 and FNO190: a fish pathogen with genomic clonal behavior.
Q31010913	Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park
Q37850698	Complete genome sequences of four mammalian isolates of Chlamydophila psittaci
Q42131498	Complete genome sequences of probiotic strains Bifidobacterium animalis subsp. lactis B420 and Bi-07.
Q42216445	Complete genome sequencing and comparative analysis of the linezolid-resistant Enterococcus faecalis strain DENG1.
Q94471889	Complete genome sequencing and comparative genomic analyses of Bacillus sp. S3, a novel hyper Sb(III)-oxidizing bacterium
Q26700041	Complete genome sequencing and comparative genomic analysis of functionally diverse Lysinibacillus sphaericus III(3)7
Q58118336	Complete genome sequencing of sixteen Francisella noatunensis subsp. orientalis isolates: A genomic approach for molecular characterization and spread dynamics of this clonal population
Q36974654	Complete genomes of two dipteran-associated spiroplasmas provided insights into the origin, dynamics, and impacts of viral invasion in spiroplasma
Q36278218	Complete mitochondrial genomes of prasinophyte algae Pyramimonas parkeae and Cymbomonas tetramitiformis
Q41137128	Complete nucleotide sequence of phiCHU: a Luz24likevirus infecting Pseudomonas aeruginosa and displaying a unique host range
Q36505529	Complete nucleotide sequences of blaKPC-4- and blaKPC-5-harboring IncN and IncX plasmids from Klebsiella pneumoniae strains isolated in New Jersey
Q38631874	Complete plastome sequencing of both living species of Circaeasteraceae (Ranunculales) reveals unusual rearrangements and the loss of the ndh gene family
Q35777195	Complex Population Structure and Virulence Differences among Serotype 2 Streptococcus suis Strains Belonging to Sequence Type 28.
Q36255056	Comprehensive analysis of draft genomes of two closely related pseudomonas syringae phylogroup 2b strains infecting mono- and dicotyledon host plants
Q55334402	Comprehensive analysis of single molecule sequencing-derived complete genome and whole transcriptome of Hyposidra talaca nuclear polyhedrosis virus.
Q33565500	Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants
Q30994433	Comprehensive insights in the Mycobacterium avium subsp. paratuberculosis genome using new WGS data of sheep strain JIII-386 from Germany
Q58784868	Computational Methods in Microbial Population Genomics
Q35115261	Concordance and discordance of sequence survey methods for molecular epidemiology
Q89537087	Consequences Of Long-Term Bacteria's Exposure To Silver Nanoformulations With Different PhysicoChemical Properties
Q92169262	Conservation and innovation: Plastome evolution during rapid radiation of Rhodiola on the Qinghai-Tibetan Plateau
Q36936278	Conservation of meningococcal antigens in the genus Neisseria
Q40096755	Conservation of the Essential Genome Among Caulobacter and Brevundimonas Species
Q34165402	Conservation of transcription start sites within genes across a bacterial genus
Q30934049	Construction of a virtual Mycobacterium tuberculosis consensus genome and its application to data from a next generation sequencer
Q43748760	Convergence of plasmid architectures drives emergence of multi-drug resistance in a clonally diverse Escherichia coli population from a veterinary clinical care setting.
Q54975909	Convergent Loss of ABC Transporter Genes From Clostridioides difficile Genomes Is Associated With Impaired Tyrosine Uptake and p-Cresol Production.
Q37660952	Convergent patterns in the evolution of mealybug symbioses involving different intrabacterial symbionts.
Q58606405	Conversion of Methionine to Cysteine in Depends on the Highly Mobile Gene Cluster
Q58701530	Coordinate systems for supergenomes
Q35228812	Core and accessory genome architecture in a group of Pseudomonas aeruginosa Mu-like phages.
Q35118766	Correction of the Caulobacter crescentus NA1000 genome annotation
Q36391898	Correlated evolutionary rates across genomic compartments in Annonaceae.
Q98568647	Cryptic speciation of a pelagic Roseobacter population varying at a few thousand nucleotide sites
Q59543719	Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size
Q49922709	Culture-facilitated Comparative Genomics of the Facultative Symbiont Hamiltonella defensa.
Q64101688	Cumulative acquisition of pathogenicity islands has shaped virulence potential and contributed to the emergence of LEE-negative Shiga toxin-producing Escherichia coli strains
Q92519431	Cuscuta Species Identification Based on the Morphology of Reproductive Organs and Complete Chloroplast Genome Sequences
Q36459327	DNA sequence analysis of plasmids from multidrug resistant Salmonella enterica serotype Heidelberg isolates
Q38872286	DNA uptake sequences in Neisseria gonorrhoeae as intrinsic transcriptional terminators and markers of horizontal gene transfer.
Q30276983	Data characterizing the chloroplast genomes of extinct and endangered Hawaiian endemic mints (Lamiaceae) and their close relatives
Q89769724	Data of de novo genome assembly of the Chlamydia psittaci strain isolated from the livestock in Volga Region, Russian Federation
Q93167249	Dataset on phenotypic characterization, on protein and genome analysis of three fluorescent Pseudomonas strains from mid-mountain water
Q21144885	De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences
Q42690829	De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii.
Q35090499	De novo sequences of Haloquadratum walsbyi from Lake Tyrrell, Australia, reveal a variable genomic landscape.
Q36063882	Deciphering the Draft Genome of Toxoplasma gondii RH Strain
Q35868635	Defining the Core Genome of Salmonella enterica Serovar Typhimurium for Genomic Surveillance and Epidemiological Typing.
Q35193308	Delineating community outbreaks of Salmonella enterica serovar Typhimurium by use of whole-genome sequencing: insights into genomic variability within an outbreak
Q47117040	Delineating the Origins of Vibrio parahaemolyticus Isolated from Outbreaks of Acute Hepatopancreatic Necrosis Disease in Asia by the Use of Whole Genome Sequencing
Q52368180	Dense infraspecific sampling reveals rapid and independent trajectories of plastome degradation in a heterotrophic orchid complex.
Q60912148	Detection and variability analyses of CRISPR-like loci in the genome
Q35014397	Detection of homologous recombination events in bacterial genomes
Q39940459	Detection of homologous recombination in closely related strains.
Q39080549	Detection of linezolid resistance due to the optrA gene in Enterococcus faecalis from poultry meat from the American continent (Colombia).
Q33901460	Detection of mcr-1-Carrying Escherichia coli Causing Bloodstream Infection in a New York City Hospital: Avian Origins, Human Concerns?
Q52620113	Developing a Bacteroides System for Function-Based Screening of DNA from the Human Gut Microbiome.
Q90621882	Development and Implementation of Multiplex TaqMan Array Cards for Specimen Testing at Child Health and Mortality Prevention Surveillance Site Laboratories
Q39042934	Development and validation of an rDNA operon based primer walking strategy applicable to de novo bacterial genome finishing
Q33705764	Development of Chloroplast and Nuclear DNA Markers for Chinese Oaks (Quercus Subgenus Quercus) and Assessment of Their Utility as DNA Barcodes
Q58700657	Development of a genome-informed loop-mediated isothermal amplification assay for rapid and specific detection of Xanthomonas euvesicatoria
Q40556929	Development of chloroplast genomic resources for Cynara.
Q34699798	Dialects of the DNA uptake sequence in Neisseriaceae.
Q92525511	Diazaquinomycin Biosynthetic Gene Clusters from Marine and Freshwater Actinomycetes
Q41644801	Differences down-under: alcohol-fueled methanogenesis by archaea present in Australian macropodids
Q39741137	Differential genomic variation between short- and long-term bacterial evolution revealed by ultradeep sequencing
Q35193316	Differential single nucleotide polymorphism-based analysis of an outbreak caused by Salmonella enterica serovar Manhattan reveals epidemiological details missed by standard pulsed-field gel electrophoresis
Q36363498	Directional evolution of Chlamydia trachomatis towards niche-specific adaptation.
Q28648443	Discovery of Novel ncRNA Sequences in Multiple Genome Alignments on the Basis of Conserved and Stable Secondary Structures
Q46958771	Disproportional plastome-wide increase of substitution rates and relaxed purifying selection in genes of carnivorous Lentibulariaceae
Q58322641	Disruption of Activates β-Lactamase Production in Stenotrophomonas maltophilia and Pseudomonas aeruginosa Clinical Isolates
Q40240322	Disruption of tetR type regulator adeN by mobile genetic element confers elevated virulence in Acinetobacter baumannii.
Q37648621	Dissection of genomic features and variations of three pathotypes of Puccinia striiformis through whole genome sequencing
Q46377672	Distinct cis-acting regions control six6 expression during eye field and optic cup stages of eye formation
Q35915793	Distinctive Architecture of the Chloroplast Genome in the Chlorodendrophycean Green Algae Scherffelia dubia and Tetraselmis sp. CCMP 881
Q90741161	Distribution and characterization of Shiga toxin converting temperate phages carried by Shigella flexneri in Hispaniola
Q41890588	Distribution of Gifsy-3 and of variants of ST64B and Gifsy-1 prophages amongst Salmonella enterica Serovar Typhimurium isolates: evidence that combinations of prophages promote clonality
Q42336013	Distribution of Suicin Gene Clusters in Streptococcus suis Serotype 2 Belonging to Sequence Types 25 and 28.
Q21092704	Distributive conjugal transfer in mycobacteria generates progeny with meiotic-like genome-wide mosaicism, allowing mapping of a mating identity locus
Q103805583	Diversification of methanogens into hyperalkaline serpentinizing environments through adaptations to minimize oxidant limitation
Q96303527	Diversity of Mobile Genetic Elements in the Mitogenomes of Closely Related Fusarium culmorum and F. graminearum sensu stricto Strains and Its Implication for Diagnostic Purposes
Q92761559	Diversity patterns of bacteriophages infecting Aggregatibacter and Haemophilus species across clades and niches
Q92538893	Domestication of previously uncultivated Candidatus Desulforudis audaxviator from a deep aquifer in Siberia sheds light on its physiology and evolution
Q28607613	Donkey genome and insight into the imprinting of fast karyotype evolution
Q40604233	Draft Genome Sequence and Complete Plasmid Sequence of Acinetobacter lwoffii F78, an Isolate with Strong Allergy-Protective Properties
Q41847197	Draft Genome Sequence of Acinetobacter oleivorans PF1, a Diesel-Degrading and Plant-Growth-Promoting Endophytic Strain Isolated from Poplar Trees Growing on a Diesel-Contaminated Plume
Q36900766	Draft Genome Sequence of Bacillus licheniformis CG-B52, a Highly Virulent Bacterium of Pacific White Shrimp (Litopenaeus vannamei), Isolated from a Colombian Caribbean Aquaculture Outbreak
Q42315600	Draft Genome Sequence of Bacillus licheniformis VSD4, a Diesel Fuel-Degrading and Plant Growth-Promoting Phyllospheric Bacterium.
Q55009950	Draft Genome Sequence of Bacillus pumilus SCAL1, an Endophytic Heat-Tolerant Plant Growth-Promoting Bacterium.
Q37201406	Draft Genome Sequence of Bacillus subtilis Strain S1-4, Which Degrades Feathers Efficiently
Q41850063	Draft Genome Sequence of Burkholderia cordobensis Type Strain LMG 27620, Isolated from Agricultural Soils in Argentina
Q41954996	Draft Genome Sequence of Burkholderia dolosa PC543 Isolated from Cystic Fibrosis Airways
Q37731083	Draft Genome Sequence of Corynebacterium pseudotuberculosis Strain PA05 Isolated from an Ovine Host in Pará State, Brazil.
Q34580557	Draft Genome Sequence of Coxiella burnetii Strain Cb196, an Agent of Endocarditis in Saudi Arabia
Q40774303	Draft Genome Sequence of Curtobacterium flaccumfaciens Strain UCD-AKU (Phylum Actinobacteria).
Q40602133	Draft Genome Sequence of Dietzia sp. Strain UCD-THP (Phylum Actinobacteria).
Q91808063	Draft Genome Sequence of Enterococcus durans OSY-EGY, a Multiple-Antimicrobial-Peptide Producer Isolated from Egyptian Hard Cheese
Q41889140	Draft Genome Sequence of Enterococcus faecalis Strain PF3, Isolated from Adelie Penguin Feces from Antarctica
Q42177442	Draft Genome Sequence of Enterococcus hirae Strain INF E1 Isolated from Cultured Milk
Q42206598	Draft Genome Sequence of Environmental Vibrio cholerae 2012EL-1759 with Similarities to the V. cholerae O1 Classical Biotype
Q39920502	Draft Genome Sequence of Erythromycin-Resistant Streptococcus gallolyticus subsp. gallolyticus NTS 31106099 Isolated from a Patient with Infective Endocarditis and Colorectal Cancer
Q40578402	Draft Genome Sequence of Highly Rifampin-Resistant Propionibacterium namnetense NTS 31307302T Isolated from a Patient with a Bone Infection
Q42216104	Draft Genome Sequence of Lactobacillus curvatus FLEC03, a Meat-Borne Isolate from Beef Carpaccio Packaged in a Modified Atmosphere
Q40596076	Draft Genome Sequence of Lactobacillus delbrueckii Strain #22 Isolated from a Patient with Short Bowel Syndrome and Previous d-Lactic Acidosis and Encephalopathy
Q64060328	Draft Genome Sequence of Lactobacillus paraplantarum OSY-TC318, a Producer of the Novel Lantibiotic Paraplantaracin TC318
Q41850099	Draft Genome Sequence of Lactobacillus sp. Strain TCF032-E4, Isolated from Fermented Radish
Q38265154	Draft Genome Sequence of Lactococcus lactis subsp. lactis bv. diacetylactis CRL264, a Citrate-Fermenting Strain.
Q42275570	Draft Genome Sequence of Lawsonia intracellularis Strain E40504, Isolated from a Horse Diagnosed with Equine Proliferative Enteropathy
Q41898232	Draft Genome Sequence of Leuconostoc mesenteroides P45 Isolated from Pulque, a Traditional Mexican Alcoholic Fermented Beverage
Q35662118	Draft Genome Sequence of Mycobacterium chelonae Type Strain ATCC 35752.
Q43165122	Draft Genome Sequence of Pantoea sp. Strain MBLJ3, Isolated in a Laboratory Environmental Control Study
Q36381837	Draft Genome Sequence of Pedobacter sp. Strain Hv1, an Isolate from Medicinal Leech Mucosal Castings
Q64090410	Draft Genome Sequence of Porphyromonas gingivalis Strain 381 Okayama (381OKJP) Stock Culture
Q42007112	Draft Genome Sequence of Rhodococcus erythropolis VSD3, a Diesel Fuel-Degrading and Plant Growth-Promoting Bacterium Isolated from Hedera helix Leaves.
Q37596981	Draft Genome Sequence of Salmonella enterica Serovar Typhi Strain STH2370.
Q42250972	Draft Genome Sequence of Salmonella enterica subsp. enterica Serovar Manhattan Strain 111113, from an Outbreak of Human Infections in Northern Italy
Q33781793	Draft Genome Sequence of Serratia proteamaculans MFPA44A14-05, a Model Organism for the Study of Meat and Seafood Spoilage
Q60921763	Draft Genome Sequence of Sinorhizobium meliloti Strain AK170
Q60912641	Draft Genome Sequence of Sinorhizobium meliloti Strain CXM1-105
Q35969809	Draft Genome Sequence of Streptomyces sp. Strain Wb2n-11, a Desert Isolate with Broad-Spectrum Antagonism against Soilborne Phytopathogens
Q35837276	Draft Genome Sequence of a Highly Virulent Rabbit Staphylococcus aureus Strain
Q33917842	Draft Genome Sequence of a New Shigella flexneri Subserotype, 4S BJ10610
Q42379993	Draft Genome Sequence of a Novel Chitinophaga sp. Strain, MD30, Isolated from a Biofilm in an Air Conditioner Condensate Pipe
Q41555120	Draft Genome Sequence of a Pseudomonas aeruginosa NA04 Bacterium Isolated from an Entomopathogenic Nematode
Q42379964	Draft Genome Sequence of an Atypical Highly Virulent Rabbit Staphylococcus aureus Strain
Q37115903	Draft Genome Sequence of an Enterococcus thailandicus Strain Isolated from Bovine Feces
Q38543899	Draft Genome Sequence of an Invasive Multidrug-Resistant Strain, Pseudomonas aeruginosa BK1, Isolated from a Keratitis Patient.
Q59813760	Draft Genome Sequence of sp. Strain PB12/4term, a Thermophilic Facultative Anaerobic Bacterium from Bottom Sediments of Lake Baikal, Russia
Q60921807	Draft Genome Sequence of the Cyanotroph Pseudomonas monteilii BCN3
Q55226129	Draft Genome Sequence of the Intimin-Positive Enteropathogenic Escherichia albertii Strain MBT-EA1, Isolated from Lettuce.
Q42143923	Draft Genome Sequences for Ten Salmonella enterica Serovar Typhimurium Phage Type 135 Variants
Q35756952	Draft Genome Sequences of Bacillus anthracis Strains Stored for Several Decades in Japan
Q55051708	Draft Genome Sequences of Four Clinical Legionella pneumophila Isolates from Ontario, Canada.
Q38265159	Draft Genome Sequences of Four Enterococcus faecium Strains Isolated from Argentine Cheese.
Q40408139	Draft Genome Sequences of Four Propionibacterium acnes Strains Isolated from Implant-Related Infections.
Q47556327	Draft Genome Sequences of Four Salmonella enterica subsp. enterica Serovar Enteritidis Strains Implicated in Infections of Avian and Human Hosts
Q33457148	Draft Genome Sequences of Mycobacterium setense Type Strain DSM-45070 and the Nonpathogenic Strain Manresensis, Isolated from the Bank of the Cardener River in Manresa, Catalonia, Spain
Q55337062	Draft Genome Sequences of Nine Strains of Brochothrix thermosphacta, Carnobacterium divergens, Lactobacillus algidus, Lactobacillus fuchuensis, Lactococcus piscium, Leuconostoc gelidum subsp. gasicomitatum, Pseudomonas lundensis, and Weissella virid
Q40365009	Draft Genome Sequences of Pandrug-Resistant Serratia marcescens Clinical Isolates Harboring blaNDM-1.
Q33619105	Draft Genome Sequences of Six Ruminant Coxiella burnetii Isolates of European Origin
Q37014641	Draft Genome Sequences of Three Strains of Ehrlichia ruminantium, a Tick-Borne Pathogen of Ruminants, Isolated from Zimbabwe, The Gambia, and Ghana
Q36850064	Draft Genome Sequences of Two Pairs of Human Intestinal Bifidobacterium longum subsp. longum Strains, 44B and 1-6B and 35B and 2-2B, Consecutively Isolated from Two Children after a 5-Year Time Period
Q92089173	Draft Genome Sequences of Type VI Secretion System-Encoding Vibrio fischeri Strains FQ-A001 and ES401
Q41249502	Draft Genome Sequences of the Multiresistant Escherichia coli C20 Strain, Isolated from Domestic Chicken Gut Microbiota
Q40521727	Draft Genome Sequences of the Probiotic Enterococcus faecalis Symbioflor 1 Clones DSM16430 and DSM16434.
Q36548190	Draft Whole-Genome Sequence of Haemophilus ducreyi Strain AUSPNG1, Isolated from a Cutaneous Ulcer of a Child from Papua New Guinea
Q39539602	Draft genome comparison of representatives of the three dominant genotype groups of dairy Bacillus licheniformis strains
Q39077200	Draft genome of the Arabidopsis thaliana phyllosphere bacterium, Williamsia sp. ARP1.
Q42078706	Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S.
Q40044746	Draft genome sequence for virulent and avirulent strains of Xanthomonas arboricola isolated from Prunus spp. in Spain.
Q36076824	Draft genome sequence of 'Treponema phagedenis' strain V1, isolated from bovine digital dermatitis
Q36396983	Draft genome sequence of Bacillus pumilus BA06, a producer of alkaline serine protease with leather-dehairing function.
Q47161975	Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring
Q64109671	Draft genome sequence of Enterococcus faecium SP15, a potential probiotic strain isolated from spring water
Q42850540	Draft genome sequence of Gluconobacter thailandicus NBRC 3257.
Q35896838	Draft genome sequence of Methylibium sp. strain T29, a novel fuel oxygenate-degrading bacterial isolate from Hungary.
Q46236989	Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
Q42599012	Draft genome sequence of Vibrio fischeri SR5, a strain isolated from the light organ of the Mediterranean squid Sepiola robusta.
Q28817911	Draft genome sequence of type strain HBR26(T) and description of Rhizobium aethiopicum sp. nov
Q46244229	Draft genome sequences of Bradyrhizobium shewense sp. nov. ERR11T and Bradyrhizobium yuanmingense CCBAU 10071T.
Q36639021	Draft genome sequences of Pantoea agglomerans and Pantoea vagans isolates associated with termites.
Q35943148	Draft genome sequences of Staphylococcus aureus sequence type 34 (ST34) and ST42 hybrids
Q36810524	Drosophila americana as a model species for comparative studies on the molecular basis of phenotypic variation
Q35915026	Dynamic Evolution of the Chloroplast Genome in the Green Algal Classes Pedinophyceae and Trebouxiophyceae
Q58098946	Dynamic evolution of inverted repeats in Euglenophyta plastid genomes
Q37260857	Dynamics of genome change among Legionella species
Q91639109	Early Stage Adaptation of a Mesophilic Green Alga to Antarctica: Systematic Increases in Abundance of Enzymes and LEA Proteins
Q33806900	Easyfig: a genome comparison visualizer
Q38706848	EcoBLMcrX, a classical modification-dependent restriction enzyme in Escherichia coli B: Characterization in vivo and in vitro with a new approach to cleavage site determination
Q37557725	Ecology drives the distribution of specialized tyrosine metabolism modules in fungi
Q41451073	Effects of DNA size on transformation and recombination efficiencies in Xylella fastidiosa
Q90064942	Efficient merging of genome profile alignments
Q37499479	Eight new genomes and synthetic controls increase the accessibility of rapid melt-MAMA SNP typing of Coxiella burnetii.
Q46241916	Elizabethkingia anophelis is the dominant species found in blood cultures, Singapore.
Q35616177	Elucidation of the Photorhabdus temperata Genome and Generation of a Transposon Mutant Library To Identify Motility Mutants Altered in Pathogenesis
Q30401330	Emergence and Evolution of Multidrug-Resistant Klebsiella pneumoniae with both blaKPC and blaCTX-M Integrated in Chromosome
Q51142294	Emergence of a plasmid-borne multidrug resistance gene cfr(C) in foodborne pathogen Campylobacter.
Q61803113	Emergence of trait variability through the lens of nitrogen assimilation in
Q35591921	Empirical Transition Probability Indexing Sparse-Coding Belief Propagation (ETPI-SCoBeP) Genome Sequence Alignment
Q90557513	Enlarged and highly repetitive plastome of Lagarostrobos and plastid phylogenomics of Podocarpaceae
Q42358833	Enterobacter cloacae Complex Isolates Harboring blaNMC-A or blaIMI-Type Class A Carbapenemase Genes on Novel Chromosomal Integrative Elements and Plasmids
Q54940051	Enterococcus faecalis AHG0090 is a Genetically Tractable Bacterium and Produces a Secreted Peptidic Bioactive that Suppresses Nuclear Factor Kappa B Activation in Human Gut Epithelial Cells.
Q33815077	Epidemic Klebsiella pneumoniae ST258 is a hybrid strain
Q47155593	Epidemiological information is key when interpreting whole genome sequence data - lessons learned from a large Legionella pneumophila outbreak in Warstein, Germany, 2013.
Q91452523	Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis
Q33426304	Escherichia coli O157:H7 strains harbor at least three distinct sequence types of Shiga toxin 2a-converting phages
Q47581310	Essential Steps in Characterizing Bacteriophages: Biology, Taxonomy, and Genome Analysis
Q40749505	Evaluating synteny for improved comparative studies
Q33916131	Evaluating the fidelity of de novo short read metagenomic assembly using simulated data
Q58107248	Evaluating the origin and virulence of a Helicobacter pylori cagA-positive strain isolated from a non-human primate
Q37901945	Everything at once: comparative analysis of the genomes of bacterial pathogens
Q41843253	Evidence for extensive gene flow and Thermotoga subpopulations in subsurface and marine environments
Q34565895	Evidence of a dominant lineage of Vibrio cholerae-specific lytic bacteriophages shed by cholera patients over a 10-year period in Dhaka, Bangladesh
Q41688733	Evidence of horizontal gene transfer between obligate leaf nodule symbionts
Q21128713	Evidence that ebolaviruses and cuevaviruses have been diverging from marburgviruses since the Miocene
Q64119175	Evolution and Diversification of Genes in Solanaceae
Q64065620	Evolution and Diversification of Kiwifruit Mitogenomes through Extensive Whole-Genome Rearrangement and Mosaic Loss of Intergenic Sequences in a Highly Variable Region
Q37116322	Evolution and Diversity of Listeria monocytogenes from Clinical and Food Samples in Shanghai, China
Q41751968	Evolution and comparative genomics of Campylobacter jejuni ST-677 clonal complex
Q36277319	Evolution and virulence contributions of the autotransporter proteins YapJ and YapK of Yersinia pestis CO92 and their homologs in Y. pseudotuberculosis IP32953
Q52350769	Evolution of Sequence Type 4821 Clonal Complex Meningococcal Strains in China from Prequinolone to Quinolone Era, 1972-2013.
Q28354187	Evolution of Variable Number Tandem Repeats and Its Relationship with Genomic Diversity in Salmonella Typhimurium
Q42244970	Evolution of a self-inducible cytolethal distending toxin type V-encoding bacteriophage from Escherichia coli O157:H7 to Shigella sonnei
Q36216435	Evolution of mitosome metabolism and invasion-related proteins in Cryptosporidium
Q36569812	Evolution of short inverted repeat in cupressophytes, transfer of accD to nucleus in Sciadopitys verticillata and phylogenetic position of Sciadopityaceae
Q41466765	Evolution of tRNA Repertoires in Bacillus Inferred with OrthoAlign
Q58039689	Evolution of the U.S. Biological Select Agent Rathayibacter toxicus
Q93071568	Evolution of the human cold/menthol receptor, TRPM8
Q47101407	Evolutionary Context of Non-Sorbitol-Fermenting Shiga Toxin-Producing Escherichia coli O55:H7.
Q36706268	Evolutionary Genomics of Salmonella enterica Subspecies
Q36727688	Evolutionary History of the Global Emergence of the Escherichia coli Epidemic Clone ST131
Q43448295	Evolutionary and biotechnology implications of plastid genome variation in the inverted-repeat-lacking clade of legumes
Q37308784	Evolutionary dynamics of Enterococcus faecium reveals complex genomic relationships between isolates with independent emergence of vancomycin resistance
Q35849727	Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
Q35867666	Evolutionary dynamics of small RNAs in 27 Escherichia coli and Shigella genomes
Q34789845	Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates
Q34031750	Evolutionary genomics of a temperate bacteriophage in an obligate intracellular bacteria (Wolbachia).
Q46271986	Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.
Q92353366	Evolutionary mechanism leading to the multi-cagA genotype in Helicobacter pylori
Q34560262	Evolutionary origin of highly repetitive plastid genomes within the clover genus (Trifolium).
Q41584086	Evolutionary potential, cross-stress behavior and the genetic basis of acquired stress resistance in Escherichia coli.
Q42545713	Evolutionary signals of selection on cognition from the great tit genome and methylome.
Q41688887	Exception to the Rule: Genomic Characterization of Naturally Occurring Unusual Vibrio cholerae Strains with a Single Chromosome.
Q39232313	Exiguobacterium: an overview of a versatile genus with potential in industry and agriculture.
Q61449520	Expansion and Diversification of MFS Transporters in
Q46443607	Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes
Q45062746	Experimental Evaluation of Host Adaptation of Lactobacillus reuteri to Different Vertebrate Species
Q40382143	Experimental pathogenicity and complete genome characterization of a pig origin Pasteurella multocida serogroup F isolate HN07.
Q47113496	Expression and evolutionary patterns of mycobacteriophage D29 and its temperate close relatives.
Q34618204	Expression of a novel P22 ORFan gene reveals the phage carrier state in Salmonella typhimurium.
Q58798150	Extended-spectrum β-lactamase-encoding genes are spreading on a wide range of Escherichia coli plasmids existing prior to the use of third-generation cephalosporins
Q64229848	Extensive Losses of Photosynthesis Genes in the Plastome of a Mycoheterotrophic Orchid, Cyrtosia septentrionalis (Vanilloideae: Orchidaceae)
Q28728599	Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut
Q41900759	Fast alignment-free sequence comparison using spaced-word frequencies.
Q41924841	Fatal Outbreak in Tonkean Macaques Caused by Possibly Novel Orthopoxvirus, Italy, January 2015(1).
Q90557514	Fine-Scale Haplotype Structure Reveals Strong Signatures of Positive Selection in a Recombining Bacterial Pathogen
Q90384765	First Genome Sequence of Pasteurella multocida Type B Strain BAUTB2, a Major Pathogen Responsible for Mortality of Bovines in Bangladesh
Q44801515	First case of E anophelis outbreak in an intensive-care unit
Q98394719	First characterization of the complete mitochondrial genome of fungal plant-pathogen Monilinia laxa which represents the mobile intron rich structure
Q92341703	First report of Klebsiella quasipneumoniae harboring bla KPC-2 in Saudi Arabia
Q28607448	Fitness Trade-Offs Determine the Role of the Molecular Chaperonin GroEL in Buffering Mutations
Q50047143	Fitness tradeoffs of antibiotic resistance in extra-intestinal pathogenic Escherichia coli.
Q21558805	Four Escherichia coli O157:H7 phages: a new bacteriophage genus and taxonomic classification of T1-like phages
Q34007602	Francisella halioticida sp. nov., a pathogen of farmed giant abalone (Haliotis gigantea) in Japan
Q84963684	Francisella opportunistica sp. nov., isolated from human blood and cerebrospinal fluid
Q35547640	Francisella tularensis Subtype A.II Genomic Plasticity in Comparison with Subtype A.I.
Q46246631	From genomes to genotypes: molecular epidemiological analysis of Chlamydia gallinacea reveals a high level of genetic diversity for this newly emerging chlamydial pathogen.
Q57281972	Function of BriC peptide in the pneumococcal competence and virulence portfolio
Q56838661	Functional and Genome Sequence-Driven Characterization of Effector Gene Repertoires Reveals Novel Variants With Altered Specificities in Closely Related Malian pv. Strains
Q36296955	Functional and comparative genome analysis of novel virulent actinophages belonging to Streptomyces flavovirens.
Q60213473	Functional annotation and distribution overview of RNA families in 27 Streptococcus agalactiae genomes
Q35826201	Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees
Q35141178	Fungal metabolic gene clusters-caravans traveling across genomes and environments
Q55406293	Galleria mellonella Reveals Niche Differences Between Highly Pathogenic and Closely Related Strains of Francisella spp.
Q34314179	Gegenees: fragmented alignment of multiple genomes for determining phylogenomic distances and genetic signatures unique for specified target groups
Q46271953	Gene Acquisition by a Distinct Phyletic Group within Streptococcus pneumoniae Promotes Adhesion to the Ocular Epithelium.
Q36052601	Gene Loss and Horizontal Gene Transfer Contributed to the Genome Evolution of the Extreme Acidophile "Ferrovum".
Q39103166	Gene flow in environmental Legionella pneumophila leads to genetic and pathogenic heterogeneity within a Legionnaires' disease outbreak
Q42376098	Gene losses and partial deletion of small single-copy regions of the chloroplast genomes of two hemiparasitic Taxillus species
Q35540496	Gene order alignment on trees with multiOrthoAlign
Q30397655	Genetic Analysis of Vibrio parahaemolyticus O3:K6 Strains That Have Been Isolated in Mexico Since 1998
Q49369697	Genetic Competence Drives Genome Diversity in Bacillus subtilis.
Q60959965	Genetic Loci Associated With Fluoride Resistance in
Q92205141	Genetic determinants of genus-level glycan diversity in a bacterial protein glycosylation system
Q35796422	Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides
Q34728334	Genetic distance in the whole-genome perspective on Listeria monocytogenes strains F2-382 and NIHS-28 that show similar subtyping results
Q35831283	Genetic diversity in the plasticity zone and the presence of the chlamydial plasmid differentiates Chlamydia pecorum strains from pigs, sheep, cattle, and koalas
Q54229654	Genetic exchange and reassignment in Porphyromonas gingivalis.
Q34785884	Genetic variability of mutans streptococci revealed by wide whole-genome sequencing
Q60961127	Genome Analysis of Haplotype D of Liberibacter Solanacearum
Q36224945	Genome Analysis of Streptococcus pyogenes Associated with Pharyngitis and Skin Infections
Q47221498	Genome Characterization of the First Mimiviruses of Lineage C Isolated in Brazil
Q93357997	Genome Comparisons of Wild Isolates of Caulobacter crescentus Reveal Rates of Inversion and Horizontal Gene Transfer
Q36780152	Genome Sequence and Analysis of Escherichia coli MRE600, a Colicinogenic, Nonmotile Strain that Lacks RNase I and the Type I Methyltransferase, EcoKI
Q33917837	Genome Sequence of "Candidatus Arthromitus" sp. Strain SFB-Mouse-NL, a Commensal Bacterium with a Key Role in Postnatal Maturation of Gut Immune Functions
Q37709031	Genome Sequence of Bacillus pumilus MTCC B6033.
Q41970763	Genome Sequence of Lactobacillus fabifermentans Strain T30PCM01, Isolated from Fermenting Grape Marc
Q42167326	Genome Sequence of Listeria monocytogenes Strain F6540 (Sequence Type 360) Collected from Food Samples in Ontario, Canada
Q33584688	Genome Sequence of Pseudomonas brassicacearum DF41
Q42739173	Genome Sequence of Pseudomonas chlororaphis Strain PA23
Q37116157	Genome Sequence of Salmonella bongori Strain N268-08 [corrected].
Q36871598	Genome Sequence of Salmonella enterica Serotype Tennessee Strain CDC07-0191, Implicated in the 2006-2007 Multistate Food-Borne Outbreak Linked to Peanut Butter in the United States.
Q39660402	Genome Sequence of Serratia plymuthica V4.
Q64056087	Genome Sequence of a California Isolate of Fusarium oxysporum f. sp. Race 3, a Fungus Causing Wilt Disease on Tomato
Q36756776	Genome Sequence of a Plant-Associated Bacterium, Bacillus amyloliquefaciens Strain UCMB5036
Q55438781	Genome Sequences of Shewanella baltica and Shewanella morhuae Strains Isolated from the Gastrointestinal Tract of Freshwater Fish.
Q37201393	Genome Sequences of Three hpAfrica2 Strains of Helicobacter pylori
Q41814210	Genome Sequences of Two Pathogenic Streptococcus agalactiae Isolates from the One-Humped Camel Camelus dromedarius
Q38819825	Genome Sequencing Analysis of Atypical Shigella flexneri Isolated in Korea
Q36168450	Genome Sequencing and Comparative Genomics Analysis Revealed Pathogenic Potential in Penicillium capsulatum as a Novel Fungal Pathogen Belonging to Eurotiales
Q40601839	Genome Sequencing of Ralstonia solanacearum FQY_4, Isolated from a Bacterial Wilt Nursery Used for Breeding Crop Resistance.
Q38687148	Genome Stability in Engineered Strains of the Extremely Thermophilic Lignocellulose-Degrading Bacterium Caldicellulosiruptor bescii
Q40700459	Genome Structural Diversity among 31 Bordetella pertussis Isolates from Two Recent U.S. Whooping Cough Statewide Epidemics
Q40785098	Genome Structure of the Symbiont Bifidobacterium pseudocatenulatum CECT 7765 and Gene Expression Profiling in Response to Lactulose-Derived Oligosaccharides.
Q57091716	Genome Variation in the Model Halophilic Bacterium
Q30796510	Genome alignment with graph data structures: a comparison
Q28542371	Genome analysis of Bacillus amyloliquefaciens Subsp. plantarum UCMB5113: a rhizobacterium that improves plant growth and stress management
Q34207972	Genome analysis of Campylobacter jejuni strains isolated from a waterborne outbreak
Q90382812	Genome analysis of Lactobacillus plantarum subsp. plantarum KCCP11226 reveals a well-conserved C30 carotenoid biosynthetic pathway
Q64123672	Genome analysis of Pseudomonas syringae pv. actinidiae biovar 6, which produces the phytotoxins, phaseolotoxin and coronatine
Q91362449	Genome analysis of Ranavirus frog virus 3 isolated from American Bullfrog (Lithobates catesbeianus) in South America
Q38284251	Genome analysis of a Mycoplasma hyorhinis strain derived from a primary human melanoma cell line
Q34343503	Genome analysis of environmental and clinical P. aeruginosa isolates from sequence type-1146
Q36595463	Genome analysis of the kiwifruit canker pathogen Pseudomonas syringae pv. actinidiae biovar 5
Q46300601	Genome analysis reveals insights of the endophytic Bacillus toyonensis BAC3151 as a potentially novel agent for biocontrol of plant pathogens
Q33669303	Genome analysis reveals three genomospecies in Mycobacterium abscessus
Q30356711	Genome anatomy of the gastrointestinal pathogen, Vibrio parahaemolyticus of crustacean origin.
Q28606981	Genome and Phenotype Microarray Analyses of Rhodococcus sp. BCP1 and Rhodococcus opacus R7: Genetic Determinants and Metabolic Abilities with Environmental Relevance
Q42064726	Genome and proteome analysis of 7-7-1, a flagellotropic phage infecting Agrobacterium sp H13-3.
Q21266704	Genome characterisation of the genus Francisella reveals insight into similar evolutionary paths in pathogens of mammals and fish
Q40099512	Genome characterization of a novel binary toxin-positive strain of Clostridium difficile and comparison with the epidemic 027 and 078 strains.
Q41717319	Genome characterization of two bile-isolated Vibrio fluvialis strains: an insight into pathogenicity and bile salt adaption
Q34366790	Genome diversity and divergence in Drosophila mauritiana: multiple signatures of faster X evolution
Q93165960	Genome diversity and evolutionary characteristics of clinical isolates of Bordetella pertussis circulating in Iran
Q40178164	Genome dynamics and evolution of Salmonella Typhi strains from the typhoid-endemic zones
Q35312299	Genome evolution in an ancient bacteria-ant symbiosis: parallel gene loss among Blochmannia spanning the origin of the ant tribe Camponotini
Q35794007	Genome expansion in bacteria: the curios case of Chlamydia trachomatis
Q34277260	Genome features of the endophytic actinobacterium Micromonospora lupini strain Lupac 08: on the process of adaptation to an endophytic life style?
Q38631313	Genome of a novel isolate of Paracoccus denitrificans capable of degrading N,N-dimethylformamide
Q42849959	Genome of multidrug-resistant uropathogenic Escherichia coli strain NA114 from India
Q34045074	Genome organization of epidemic Acinetobacter baumannii strains
Q34324723	Genome plasticity and systems evolution in Streptomyces.
Q58770246	Genome rearrangement shapes ecological adaptation
Q24624844	Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)
Q47163819	Genome sequence and analysis of Escherichia coli production strain LS5218.
Q36694588	Genome sequence and analysis of a broad-host range lytic bacteriophage that infects the Bacillus cereus group
Q37581477	Genome sequence and comparative analysis of a Vibrio cholerae O139 strain E306 isolated from a cholera case in China
Q35695747	Genome sequence and comparative analysis of a putative entomopathogenic Serratia isolated from Caenorhabditis briggsae.
Q38654389	Genome sequence and composition of a tolyporphin-producing cyanobacterium-microbial community
Q41812134	Genome sequence and description of the heavy metal tolerant bacterium Lysinibacillus sphaericus strain OT4b.31.
Q44640217	Genome sequence and phenotypic characterization of Caulobacter segnis.
Q58567326	Genome sequence of 4303
Q30659248	Genome sequence of Clostridium sporogenes DSM 795(T), an amino acid-degrading, nontoxic surrogate of neurotoxin-producing Clostridium botulinum
Q21263103	Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction
Q34168814	Genome sequence of Neisseria meningitidis serogroup B strain H44/76.
Q35032941	Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads
Q42657054	Genome sequence of temperate bacteriophage Psymv2 from Antarctic Dry Valley soil isolate Psychrobacter sp. MV2.
Q41995162	Genome sequence of the bacteriocin-producing strain Lactococcus garvieae DCC43.
Q41577181	Genome sequence of the swine pathogen Streptococcus suis serotype 2 strain S735.
Q34563847	Genome sequence reveals that Pseudomonas fluorescens F113 possesses a large and diverse array of systems for rhizosphere function and host interaction
Q33906307	Genome sequences characterizing five mutations in RNA polymerase and major capsid of phages ϕA318 and ϕAs51 of Vibrio alginolyticus with different burst efficiencies
Q34193077	Genome sequencing and analysis of a type A Clostridium perfringens isolate from a case of bovine clostridial abomasitis
Q36342433	Genome sequencing and comparative analysis of an NDM-1-producing Klebsiella pneumoniae ST15 isolated from a refugee patient
Q35108465	Genome sequencing of Listeria monocytogenes "Quargel" listeriosis outbreak strains reveals two different strains with distinct in vitro virulence potential
Q34298088	Genome sequencing of Mycobacterium abscessus isolates from patients in the united states and comparisons to globally diverse clinical strains
Q34191680	Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association
Q35191881	Genome sequencing of two Neorhizobium galegae strains reveals a noeT gene responsible for the unusual acetylation of the nodulation factors.
Q103002367	Genome skimming and exploration of DNA barcodes for Taiwan endemic cypresses
Q89494963	Genome-Based Comparison of All Species of the Genus Moorella, and Status of the Species Moorella thermoacetica and Moorella thermoautotrophica
Q54994074	Genome-Guided Analysis of Clostridium ultunense and Comparative Genomics Reveal Different Strategies for Acetate Oxidation and Energy Conservation in Syntrophic Acetate-Oxidising Bacteria.
Q42184369	Genome-Guided Insights into the Plant Growth Promotion Capabilities of the Physiologically Versatile Bacillus aryabhattai Strain AB211
Q28137492	Genome-Wide Comparison of Medieval and Modern Mycobacterium leprae
Q35603725	Genome-Wide Sequence Variation among Mycobacterium avium Subspecies paratuberculosis Isolates: A Better Understanding of Johne's Disease Transmission Dynamics
Q33898958	Genome-level homology and phylogeny of Shewanella (Gammaproteobacteria: lteromonadales: Shewanellaceae).
Q34664883	Genome-level homology and phylogeny of Vibrionaceae (Gammaproteobacteria: Vibrionales) with three new complete genome sequences
Q59798034	Genome-scale analysis of reveals the cold adaptation of psychrotolerant acetogens by post-transcriptional regulation
Q39283161	Genome-scale analysis of the non-cultivable Treponema pallidum reveals extensive within-patient genetic variation
Q36490036	Genome-wide patterns of natural variation reveal strong selective sweeps and ongoing genomic conflict in Drosophila mauritiana
Q41614230	Genome-wide patterns of recombination in the opportunistic human pathogen Pseudomonas aeruginosa
Q64090101	Genome-wide sexually antagonistic variants reveal long-standing constraints on sexual dimorphism in fruit flies
Q35035783	GenomeFingerprinter: the genome fingerprint and the universal genome fingerprint analysis for systematic comparative genomics
Q42129821	GenomeRing: alignment visualization based on SuperGenome coordinates
Q34136941	GenomeVISTA--an integrated software package for whole-genome alignment and visualization
Q30648262	Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus
Q35545446	Genomes of sequence type 121 Listeria monocytogenes strains harbor highly conserved plasmids and prophages
Q21263101	Genomes-based phylogeny of the genus Xanthomonas
Q37296968	Genomic Analysis Reveals Novel Diversity among the 1976 Philadelphia Legionnaires' Disease Outbreak Isolates and Additional ST36 Strains
Q46279856	Genomic Analysis of Bacillus sp. Strain B25, a Biocontrol Agent of Maize Pathogen Fusarium verticillioides
Q30401029	Genomic Analysis of Factors Associated with Low Prevalence of Antibiotic Resistance in Extraintestinal Pathogenic Escherichia coli Sequence Type 95 Strains
Q36996824	Genomic Analysis of a Serotype 5 Streptococcus pneumoniae Outbreak in British Columbia, Canada, 2005-2009.
Q64068046	Genomic Characterization Provides New Insights for Detailed Phage- Resistant Mechanism for Brucella abortus
Q91750481	Genomic Comparison Reveals Natural Occurrence of Clinically Relevant Multidrug-Resistant Extended-Spectrum-β-Lactamase-Producing Escherichia coli Strains
Q44049744	Genomic Comparison among Lethal Invasive Strains of Streptococcus pyogenes Serotype M1.
Q37428478	Genomic Comparison of Campylobacter spp. and Their Potential for Zoonotic Transmission between Birds, Primates, and Livestock
Q91782287	Genomic Comparison of Lactobacillus helveticus Strains Highlights Probiotic Potential
Q35666138	Genomic Comparison of Non-Typhoidal Salmonella enterica Serovars Typhimurium, Enteritidis, Heidelberg, Hadar and Kentucky Isolates from Broiler Chickens
Q33428897	Genomic Comparison of Two O111:H- Enterohemorrhagic Escherichia coli Isolates from a Historic Hemolytic-Uremic Syndrome Outbreak in Australia
Q35650961	Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum
Q46267383	Genomic Comparisons Reveal Microevolutionary Differences in Mycobacterium abscessus Subspecies.
Q92821803	Genomic Differences between Listeria monocytogenes EGDe Isolates Reveal Crucial Roles for SigB and Wall Rhamnosylation in Biofilm Formation
Q36062322	Genomic Diversity of Enterotoxigenic Strains of Bacteroides fragilis
Q38881339	Genomic Diversity of Type B3 Bacteriophages of Caulobacter crescentus
Q36253028	Genomic Epidemiology of Hypervirulent Serogroup W, ST-11 Neisseria meningitidis
Q92577627	Genomic Polymorphism Associated with the Emergence of Virulent Isolates of Mycobacterium bovis in the Nile Delta
Q37290710	Genomic Recombination Leading to Decreased Virulence of Group B Streptococcus in a Mouse Model of Adult Invasive Disease
Q118110667	Genomic Relationships of Glycine remota , a Recently Discovered Perennial Relative of Soybean, within Glycine
Q28828400	Genomic Signatures of Speciation in Sympatric and Allopatric Hawaiian Picture-Winged Drosophila
Q36173973	Genomic Variability of Serial Human Isolates of Salmonella enterica Serovar Typhimurium Associated with Prolonged Carriage.
Q91158922	Genomic analyses of a novel bacteriophage (VB_PmiS-Isfahan) within Siphoviridae family infecting Proteus mirabilis
Q34487073	Genomic analyses of pneumococci reveal a wide diversity of bacteriocins - including pneumocyclicin, a novel circular bacteriocin
Q61800931	Genomic analyses of two Alteromonas stellipolaris strains reveal traits with potential biotechnological applications
Q35390426	Genomic analysis of a Mycobacterium bovis bacillus [corrected] Calmette-Guérin strain isolated from an adult patient with pulmonary tuberculosis..
Q36341282	Genomic analysis of a nontoxigenic, invasive Corynebacterium diphtheriae strain from Brazil
Q91856977	Genomic analysis of a novel Rhodococcus (Prescottella) equi isolate from a bovine host
Q37377646	Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis
Q46867824	Genomic analysis of the biocontrol strain Pseudomonas fluorescens Pf29Arp with evidence of T3SS and T6SS gene expression on plant roots
Q40474955	Genomic analysis of the multi-drug-resistant clinical isolate Myroides odoratimimus PR63039.
Q58764543	Genomic analysis of the original Elberg Brucella melitensis Rev.1 vaccine strain reveals insights into virulence attenuation
Q34692000	Genomic analysis of three African strains of Bacillus anthracis demonstrates that they are part of the clonal expansion of an exclusively pathogenic bacterium
Q55238684	Genomic and Geographic Context for the Evolution of High-Risk Carbapenem-Resistant Enterobacter cloacae Complex Clones ST171 and ST78.
Q35761141	Genomic and Phenomic Study of Mammary Pathogenic Escherichia coli
Q40480488	Genomic and Transcriptional Mapping of PaMx41, Archetype of a New Lineage of Bacteriophages Infecting Pseudomonas aeruginosa.
Q60951131	Genomic and Virulence Characterization of Intrauterine Pathogenic With Multi-Drug Resistance Isolated From Cow Uteri With Metritis
Q41079784	Genomic and phenotypic analyses of Carnobacterium jeotgali strain MS3(T), a lactate-producing candidate biopreservative bacterium isolated from salt-fermented shrimp.
Q43049763	Genomic and phenotypic differentiation among Methanosarcina mazei populations from Columbia River sediment.
Q34210551	Genomic and proteomic characterization of the broad-host-range Salmonella phage PVP-SE1: creation of a new phage genus
Q36100022	Genomic and transcriptomic insights into the efficient entomopathogenicity of Bacillus thuringiensis
Q41593604	Genomic and transcriptomic studies of an RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine)-degrading actinobacterium
Q59263277	Genomic approaches toward understanding the actinorhizal symbiosis: an update on the status of the Frankia genomes
Q34523945	Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.).
Q55453245	Genomic characterisation of Leptospira inadai serogroup Lyme isolated from captured rat in Brazil and comparative analysis with human reference strain.
Q35098872	Genomic characteristics and comparative genomics analysis of Penicillium chrysogenum KF-25.
Q58778822	Genomic characterization of NDM-1 and 5, and OXA-181 carbapenemases in uropathogenic Escherichia coli isolates from Riyadh, Saudi Arabia
Q47718472	Genomic characterization of key bacteriophages to formulate the potential biocontrol agent to combat enteric pathogenic bacteria
Q34649132	Genomic comparison between Salmonella Gallinarum and Pullorum: differential pseudogene formation under common host restriction
Q50146289	Genomic comparison of Clostridium species with the potential of utilizing red algal biomass for biobutanol production.
Q92860453	Genomic determinants of speciation and spread of the Mycobacterium tuberculosis complex
Q46899480	Genomic differentiation among two strains of the PS1 clade isolated from geographically separated marine habitats
Q42690723	Genomic divergence and cohesion in a species of pelagic freshwater bacteria
Q28650497	Genomic diversification in strains of Rickettsia felis Isolated from different arthropods
Q35020468	Genomic diversity and adaptation of Salmonella enterica serovar Typhimurium from analysis of six genomes of different phage types
Q64125100	Genomic diversity and recombination among subspecies
Q90203785	Genomic epidemiology of Iranian Bordetella pertussis: 50 years after the implementation of whole cell vaccine
Q34923407	Genomic epidemiology of Klebsiella pneumoniae in Italy and novel insights into the origin and global evolution of its resistance to carbapenem antibiotics.
Q38776987	Genomic epidemiology of global VIM-producing Enterobacteriaceae
Q35779118	Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.
Q92638412	Genomic erosion and extensive horizontal gene transfer in gut-associated Acetobacteraceae
Q28597686	Genomic evidence for plant-parasitic nematodes as the earliest Wolbachia hosts
Q35607714	Genomic factors related to tissue tropism in Chlamydia pneumoniae infection
Q89924053	Genomic insight into the origins and evolution of symbiosis genes in Phaseolus vulgaris microsymbionts
Q40073111	Genomic insights of Pannonibacter phragmitetus strain 31801 isolated from a patient with a liver abscess.
Q39879069	Genomic islands 1 and 2 play key roles in the evolution of extensively drug-resistant ST235 isolates of Pseudomonas aeruginosa.
Q62570253	Genomic profiling of four cultivated Candidatus Nitrotoga spp. predicts broad metabolic potential and environmental distribution
Q37576576	Genomic reconnaissance of clinical isolates of emerging human pathogen Mycobacterium abscessus reveals high evolutionary potential.
Q48535421	Genomic repeats, misassembly and reannotation: a case study with long-read resequencing of Porphyromonas gingivalis reference strains.
Q35894541	Genomic resources for identification of the minimal N2 -fixing symbiotic genome.
Q34366695	Genomic signatures of distributive conjugal transfer among mycobacteria
Q35884421	Genomic signatures of domestication on neurogenetic genes in Drosophila melanogaster
Q37644329	Genomic structure and insertion sites of Helicobacter pylori prophages from various geographical origins
Q30843415	Genomic structure of the horse major histocompatibility complex class II region resolved using PacBio long-read sequencing technology.
Q90658001	Genomic surveillance of Escherichia coli ST131 identifies local expansion and serial replacement of subclones
Q60557552	Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial-resistance determinants and lineages
Q35053206	Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. Manihotis strain CIO151.
Q35213854	Genomic, proteomic and morphological characterization of two novel broad host lytic bacteriophages ΦPD10.3 and ΦPD23.1 infecting pectinolytic Pectobacterium spp. and Dickeya spp.
Q34238595	Genomic, proteomic and physiological characterization of a T5-like bacteriophage for control of Shiga toxin-producing Escherichia coli O157:H7.
Q36002662	Genomically Informed Surveillance for Carbapenem-Resistant Enterobacteriaceae in a Health Care System
Q22065946	Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon
Q28607226	Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome
Q22122078	Genomics of Loa loa, a Wolbachia-free filarial parasite of humans
Q36814597	Genomics of Three New Bacteriophages Useful in the Biocontrol of Salmonella.
Q40041326	Genomics-enabled analysis of the emergent disease cotton bacterial blight.
Q48096821	Geographically widespread honeybee-gut symbiont subgroups show locally distinct antibiotic-resistant patterns.
Q35910694	Ginkgo and Welwitschia Mitogenomes Reveal Extreme Contrasts in Gymnosperm Mitochondrial Evolution
Q38975469	Global Molecular Epidemiology of IMP-Producing Enterobacteriaceae
Q63937875	Global Scale Dissemination of ST93: A Divergent Epidemic Lineage That Has Recently Emerged From Remote Northern Australia
Q37711903	Global dissemination of a multidrug resistant Escherichia coli clone
Q37178789	Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages
Q41396370	Group-theoretic models of the inversion process in bacterial genomes
Q35261736	Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis development.
Q35898909	H-NS Facilitates Sequence Diversification of Horizontally Transferred DNAs during Their Integration in Host Chromosomes.
Q46298849	Habitat type and dispersal mode underlie the capacity for plant migration across an intermittent seaway.
Q28546232	Haemophilus ducreyi Cutaneous Ulcer Strains Are Nearly Identical to Class I Genital Ulcer Strains
Q28469373	Haemophilus ducreyi Cutaneous Ulcer Strains Diverged from Both Class I and Class II Genital Ulcer Strains: Implications for Epidemiological Studies
Q36294898	Helicobacter pullorum isolated from fresh chicken meat: antibiotic resistance and genomic traits of an emerging foodborne pathogen
Q33716163	Heterogeneity in the entire genome for three genotypes of peach [Prunus persica (L.) Batsch] as distinguished from sequence analysis of genomic variants
Q50323578	High Quality Draft Genomes of the Type Strains Geobacillus thermocatenulatus DSM 730T, G. uzenensis DSM 23175T And Parageobacillus galactosidasius DSM 18751T.
Q36067070	High quality draft genomic sequence of Arenimonas donghaensis DSM 18148(T).
Q37616502	High variability of mitochondrial gene order among fungi
Q60921791	High-Quality Draft Genome Sequence of Pseudomonas aeruginosa 268 Isolated from a Patient with a Left Ventricular Assist Device
Q90383721	High-Quality Draft Genome Sequence of Xanthomonas arboricola pv. juglandis CPBF 1521, Isolated from Leaves of a Symptomatic Walnut Tree in Portugal without a Past of Phytosanitary Treatment
Q90383687	High-Quality Draft Genome Sequence of Xanthomonas sp. Strain CPBF 424, a Walnut-Pathogenic Strain with Atypical Features
Q37229376	High-Quality Genome Assembly and Annotation for Plasmodium coatneyi, Generated Using Single-Molecule Real-Time PacBio Technology
Q30379307	High-quality draft genome sequence of Rhizobium mesoamericanum strain STM6155, a Mimosa pudica microsymbiont from New Caledonia.
Q36094297	High-throughput genomic sequencing of cassava bacterial blight strains identifies conserved effectors to target for durable resistance
Q92296296	Highly accelerated rates of genomic rearrangements and nucleotide substitutions in plastid genomes of Passiflora subgenus Decaloba
Q56458850	Highly conserved organellar genomes in the Gracilariales as inferred using new data from the Hawaiian invasive algaGracilaria salicornia(Rhodophyta)
Q35055473	Highly rearranged and size-variable chloroplast genomes in conifers II clade (cupressophytes): evolution towards shorter intergenic spacers
Q52348634	Hitting with a BAM: Selective Killing by Lectin-Like Bacteriocins.
Q93021107	Horizontal Gene Transfer and Acquired Antibiotic Resistance in Salmonella enterica Serovar Heidelberg following In Vitro Incubation in Broiler Ceca
Q46253988	Horizontal acquisition of a hypoxia-responsive molybdenum cofactor biosynthesis pathway contributed to Mycobacterium tuberculosis pathoadaptation
Q64064916	Horizontal acquisition of hydrogen conversion ability and other habitat adaptations in the Hydrogenovibrio strains SP-41 and XCL-2
Q28730775	Horizontal transfer and death of a fungal secondary metabolic gene cluster
Q64090444	Host adaptation and convergent evolution increases antibiotic resistance without loss of virulence in a major human pathogen
Q21145699	Host-Pathogen Coevolution: The Selective Advantage of Bacillus thuringiensis Virulence and Its Cry Toxin Genes
Q58782393	Hotspot mutations and ColE1 plasmids contribute to the fitness of Salmonella Heidelberg in poultry litter
Q33613505	How to Name and Classify Your Phage: An Informal Guide
Q90726210	Human intestinal enteroids as a model of Clostridioides difficile-induced enteritis
Q35950477	Human symbionts inject and neutralize antibacterial toxins to persist in the gut
Q64106183	Hybridization is a recurrent evolutionary stimulus in wild yeast speciation
Q64100632	ICESsuHN105, a Novel Multiple Antibiotic Resistant ICE in Streptococcus suis Serotype 5 Strain HN105
Q55517096	INSaFLU: an automated open web-based bioinformatics suite "from-reads" for influenza whole-genome-sequencing-based surveillance.
Q35527662	Identification and Molecular Characterisation of a Novel Mu-Like Bacteriophage, SfMu, of Shigella flexneri
Q42220345	Identification and characterization of a peculiar vtx2-converting phage frequently present in verocytotoxin-producing Escherichia coli O157 isolated from human infections
Q28728986	Identification and characterization of novel Salmonella mobile elements involved in the dissemination of genes linked to virulence and transmission
Q46680869	Identification and genomic analysis of antifungal property of a tomato root endophyte Pseudomonas sp. p21.
Q33565346	Identification of Horizontally-transferred Genomic Islands and Genome Segmentation Points by Using the GC Profile Method
Q43176765	Identification of Recombination and Positively Selected Genes in Brucella.
Q90379929	Identification of a Locus Conferring Dominant Susceptibility to Pyrenophora tritici-repentis in Barley
Q40046347	Identification of a mouse Lactobacillus johnsonii strain with deconjugase activity against the FXR antagonist T-β-MCA.
Q48157271	Identification of different cytoplasms based on newly developed mitotype-specific markers for marker-assisted selection breeding in Brassica napus L.
Q28650544	Identification of new genomospecies in the Mycobacterium terrae complex
Q35841291	Identification of putative adhesins of Actinobacillus suis and their homologues in other members of the family Pasteurellaceae
Q35659670	Identification of staphylococcal phage with reduced transcription in human blood through transcriptome sequencing
Q28550507	Identifying Likely Transmission Pathways within a 10-Year Community Outbreak of Tuberculosis by High-Depth Whole Genome Sequencing
Q35724366	Identifying new sex-linked genes through BAC sequencing in the dioecious plant Silene latifolia
Q61445482	Impact of Homologous Recombination on the Evolution of Prokaryotic Core Genomes
Q34308862	Impact of homologous and non-homologous recombination in the genomic evolution of Escherichia coli
Q36065963	Impact of loci nature on estimating recombination and mutation rates in Chlamydia trachomatis
Q33867196	Importance of whole genome sequencing for the assessment of outbreaks in diagnostic laboratories: analysis of a case series of invasive Streptococcus pyogenes infections
Q98574613	Improved De Novo Draft Genome Sequence of the Nocavionin-Producing Type Strain Nocardia terpenica IFM 0706 and Comparative Genomics with the Closely Related Strain Nocardia terpenica IFM 0406
Q33947348	Improving pan-genome annotation using whole genome multiple alignment
Q33819293	In Silico Signature Prediction Modeling in Cytolethal Distending Toxin-Producing Escherichia coli Strains
Q48102113	In Situ Analyses Directly in Diarrheal Stool Reveal Large Variations in Bacterial Load and Active Toxin Expression of Enterotoxigenic Escherichiacoli and Vibrio cholerae
Q35785140	In Vivo Evolution of Bacterial Resistance in Two Cases of Enterobacter aerogenes Infections during Treatment with Imipenem
Q33705234	In silico Prediction, in vitro Antibacterial Spectrum, and Physicochemical Properties of a Putative Bacteriocin Produced by Lactobacillus rhamnosus Strain L156.4.
Q35678963	In silico identification of AMPylating enzymes and study of their divergent evolution
Q34923943	In silico scrutiny of genes revealing phylogenetic congruence with clinical prevalence or tropism properties of Chlamydia trachomatis strains
Q57801442	In vivo competition and horizontal gene transfer among distinct Staphylococcus aureus lineages as major drivers for adaptational changes during long-term persistence in humans
Q92090571	Incompatibility of Vibrio fischeri Strains during Symbiosis Establishment Depends on Two Functionally Redundant hcp Genes
Q40374496	Increase in bacteraemia cases in the East Midlands region of the UK due to MDR Escherichia coli ST73: high levels of genomic and plasmid diversity in causative isolates.
Q34421230	Increased knowledge of Francisella genus diversity highlights the benefits of optimised DNA-based assays
Q46513861	Indel Group in Genomes (IGG) Molecular Genetic Markers.
Q34387014	Inference of homologous recombination in bacteria using whole-genome sequences
Q37412765	Inference of the properties of the recombination process from whole bacterial genomes
Q34351532	Inferring transcript phylogenies
Q37173680	Influence of Host Ecology and Behavior on Campylobacter jejuni Prevalence and Environmental Contamination Risk in a Synanthropic Wild Bird Species.
Q58572981	Insight Into Metabolic Versatility of an Aromatic Compounds-Degrading sp. YC-RL1
Q41110531	Insight into proteomic investigations of Neisseria meningitidis serogroup C strain L91543 from analysis of its genome sequence
Q39093572	Insight into the Genome of Brochothrix thermosphacta, a Problematic Meat Spoilage Bacterium.
Q28483539	Insights from genomics into bacterial pathogen populations
Q46361707	Insights from the complete genome sequence of Clostridium tyrobutyricum provide a platform for biotechnological and industrial applications
Q33632690	Insights from the genome annotation of Elizabethkingia anophelis from the malaria vector Anopheles gambiae
Q41718366	Insights into Symbiont Population Structure among Three Vestimentiferan Tubeworm Host Species at Eastern Pacific Spreading Centers
Q40137328	Insights into a Novel blaKPC-2-Encoding IncP-6 Plasmid Reveal Carbapenem-Resistance Circulation in Several Enterobacteriaceae Species from Wastewater and a Hospital Source in Spain
Q46843568	Insights into organohalide respiration and the versatile catabolism of Sulfurospirillum multivorans gained from comparative genomics and physiological studies
Q33611700	Insights into the Existence of Isomeric Plastomes in Cupressoideae (Cupressaceae)
Q98163689	Insights into the phylogenetic relationships and drug targets of Babesia isolates infective to small ruminants from the mitochondrial genomes
Q89597706	Integrated Genome-Wide Analysis of an Isogenic Pair of Pseudomonas aeruginosa Clinical Isolates with Differential Antimicrobial Resistance to Ceftolozane/Tazobactam, Ceftazidime/Avibactam, and Piperacillin/Tazobactam
Q64884955	Integrated mobile genetic elements in Thaumarchaeota.
Q42177844	Integration of genomic and proteomic analyses in the classification of the Siphoviridae family.
Q33703618	Integrative analysis of Salmonellosis in Israel reveals association of Salmonella enterica Serovar 9,12:l,v:- with extraintestinal infections, dissemination of endemic S. enterica Serovar Typhimurium DT104 biotypes, and severe underreporting of outb
Q55630193	Integrative and Conjugative Elements (ICEs) in Pasteurellaceae Species and Their Detection by Multiplex PCR.
Q30501790	Interplay of recombination and selection in the genomes of Chlamydia trachomatis
Q35746602	Intraspecies Genomic Diversity and Long-Term Persistence of Bifidobacterium longum.
Q36887836	Intraspecies Transfer of the Chromosomal Acinetobacter baumannii blaNDM-1 Carbapenemase Gene
Q30456149	Intraspecific variation in mitochondrial genome sequence, structure, and gene content in Silene vulgaris, an angiosperm with pervasive cytoplasmic male sterility
Q36756762	Introgression maintains the genetic integrity of the mating-type determining chromosome of the fungus Neurospora tetrasperma
Q41256373	Inventory of the GH70 enzymes encoded by Leuconostoc citreum NRRL B-1299 - identification of three novel α-transglucosylases
Q55645622	Investigating the Molecular Genetic Basis of Cytoplasmic Sex Determination Caused by Wolbachia Endosymbionts in Terrestrial Isopods.
Q50113870	Investigation of putative invasion determinants of Actinobacillus species using comparative genomics.
Q92051210	Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes
Q64107974	Isolation and Bacteriocin-Related Typing of
Q37727861	Isolation and Characterization of a Shewanella Phage-Host System from the Gut of the Tunicate, Ciona intestinalis
Q36173449	Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains
Q21090671	Isolation and characterization of two novel bacteria Afipia cberi and Mesorhizobium hominis from blood of a patient afflicted with fatal pulmonary illness
Q92635568	Isolation of Four Lytic Phages Infecting Klebsiella pneumoniae K22 Clinical Isolates from Spain
Q21090706	Isolation of novel Afipia septicemium and identification of previously unknown bacteria Bradyrhizobium sp. OHSU_III from blood of patients with poorly defined illnesses
Q94591320	Isolation, Characterization and Genomic Analysis of a Novel Bacteriophage VB_EcoS-Golestan Infecting Multidrug-Resistant Escherichia coli Isolated from Urinary Tract Infection
Q35007393	Isolation, characterization and comparative genomics of bacteriophage SfIV: a novel serotype converting phage from Shigella flexneri
Q64112038	Just the Two of Us? A Family of Pseudomonas Megaplasmids Offers a Rare Glimpse into the Evolution of Large Mobile Elements
Q37592702	Key Impact of an Uncommon Plasmid on Bacillus amyloliquefaciens subsp. plantarum S499 Developmental Traits and Lipopeptide Production.
Q42216560	Klebsiella pneumoniae Asparagine tDNAs Are Integration Hotspots for Different Genomic Islands Encoding Microcin E492 Production Determinants and Other Putative Virulence Factors Present in Hypervirulent Strains
Q64057241	Large Enriched Fragment Targeted Sequencing (LEFT-SEQ) Applied to Capture of Wolbachia Genomes
Q92642735	Large Plasmid Complement Resolved: Complete Genome Sequencing of Lactobacillus plantarum MF1298, a Candidate Probiotic Strain Associated with Unfavorable Effect
Q37287051	Large Sequence Diversity within the Biosynthesis Locus and Common Biochemical Features of Campylobacter coli Lipooligosaccharides
Q27321041	Large genomic differences between Moraxella bovoculi isolates acquired from the eyes of cattle with infectious bovine keratoconjunctivitis versus the deep nasopharynx of asymptomatic cattle.
Q37124884	Large linear plasmids of Borrelia species that cause relapsing fever
Q36236759	Large-Scale Comparative Analysis Reveals the Mechanisms Driving Plastomic Compaction, Reduction, and Inversions in Conifers II (Cupressophytes)
Q39729138	Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems.
Q35980546	Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community
Q39260672	Latin-American-Mediterranean lineage of Mycobacterium tuberculosis: Human traces across pathogen's phylogeography
Q37239405	Leisingera sp. JC1, a Bacterial Isolate from Hawaiian Bobtail Squid Eggs, Produces Indigoidine and Differentially Inhibits Vibrios
Q58579923	Lessons learnt from a porcine epidemic diarrhea (PED) case in France in 2014: Descriptive epidemiology and control measures implemented
Q34593491	Life in the dark: metagenomic evidence that a microbial slime community is driven by inorganic nitrogen metabolism
Q30352838	Livestock origin for a human pandemic clone of community-associated methicillin-resistant Staphylococcus aureus
Q64094907	Local Diversification of Methicillin- Resistant ST239 in South America After Its Rapid Worldwide Dissemination
Q41204142	Locus of Adhesion and Autoaggregation (LAA), a pathogenicity island present in emerging Shiga Toxin-producing Escherichia coli strains.
Q38674571	Long-read sequencing improves assembly of Trichinella genomes 10-fold, revealing substantial synteny between lineages diverged over 7 million years
Q92254353	Long-read sequencing reveals intra-species tolerance of substantial structural variations and new subtelomere formation in C. elegans
Q94465167	Long-reads reveal that Rhododendron delavayi plastid genome contains extensive repeat sequences, and recombination exists among plastid genomes of photosynthetic Ericaceae
Q36722359	Long-term strain improvements accumulate mutations in regulatory elements responsible for hyper-production of cellulolytic enzymes.
Q58704184	Loss of Bacitracin Resistance Due to a Large Genomic Deletion among Strains
Q38724217	Loss of the ssrA genome island led to partial debromination in the PBDE respiring Dehalococcoides mccartyi strain GY50.
Q64066718	Lost and Found: Return of the Inverted Repeat in the Legume Clade Defined by Its Absence
Q28596155	Low Prevalence of Conjunctival Infection with Chlamydia trachomatis in a Treatment-Naïve Trachoma-Endemic Region of the Solomon Islands
Q57922545	Low-Level Antimicrobials in the Medicinal Leech Select for Resistant Pathogens That Spread to Patients
Q38932009	Lysobacter species: a potential source of novel antibiotics.
Q101409946	MALDI-TOF MS and genomic analysis can make the difference in the clarification of canine brucellosis outbreaks
Q36022663	MALDI-TOF MS portrait of emetic and non-emetic Bacillus cereus group members
Q35142003	MC64-ClustalWP2: a highly-parallel hybrid strategy to align multiple sequences in many-core architectures
Q36095849	MLST and Whole-Genome-Based Population Analysis of Cryptococcus gattii VGIII Links Clinical, Veterinary and Environmental Strains, and Reveals Divergent Serotype Specific Sub-populations and Distant Ancestors
Q27347601	Major Improvements to the Heliconius melpomene Genome Assembly Used to Confirm 10 Chromosome Fusion Events in 6 Million Years of Butterfly Evolution.
Q57221343	Male-killing toxin in a bacterial symbiont of Drosophila
Q91854679	Manually curated genome-scale reconstruction of the metabolic network of Bacillus megaterium DSM319
Q35883755	Mapping the Evolution of Hypervirulent Klebsiella pneumoniae
Q34402710	Massive expansion of Ubiquitination-related gene families within the Chlamydiae
Q35837401	Massive horizontal gene transfer, strictly vertical inheritance and ancient duplications differentially shape the evolution of Bacillus cereus enterotoxin operons hbl, cytK and nhe.
Q35869681	Massive intracellular gene transfer during plastid genome reduction in nongreen Orobanchaceae
Q35455896	Matrix-assisted laser desorption ionization-time of flight and comparative genomic analysis of M-18 group a Streptococcus strains associated with an acute rheumatic fever outbreak in northeast Italy in 2012 and 2013.
Q35230994	Mauve assembly metrics
Q64271021	May the Phage be With You? Prophage-Like Elements in the Genomes of Soft Rot : spp. and spp
Q35587082	MeDuSa: a multi-draft based scaffolder.
Q34472416	Measurably evolving pathogens in the genomic era
Q34379074	Mechanisms of functional and physical genome reduction in photosynthetic and nonphotosynthetic parasitic plants of the broomrape family
Q57469799	Mesophilic Sporeformers Identified in Whey Powder by Using Shotgun Metagenomic Sequencing
Q34445180	MetaGeniE: characterizing human clinical samples using deep metagenomic sequencing
Q60907533	Metabolic diversity within the globally abundant Marine Group II Euryarchaea offers insight into ecological patterns
Q47989578	Metabolic engineering of Corynebacterium glutamicum for L-arginine production
Q92074770	Metabolomic Alterations Do Not Induce Metabolic Burden in the Industrial Yeast M2n[pBKD2-Pccbgl1]-C1 Engineered by Multiple δ-Integration of a Fungal β-Glucosidase Gene
Q35574084	Metagenome sequence of Elaphomyces granulatus from sporocarp tissue reveals Ascomycota ectomycorrhizal fingerprints of genome expansion and a Proteobacteria-rich microbiome
Q42623632	Metagenomic analysis of a complex marine planktonic thaumarchaeal community from the Gulf of Maine
Q35169115	Metagenomic analysis of the microbial community in fermented grape marc reveals that Lactobacillus fabifermentans is one of the dominant species: insights into its genome structure
Q62383883	Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome
Q38377571	Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales
Q37593141	Microdiversification of a Pelagic Polynucleobacter Species Is Mainly Driven by Acquisition of Genomic Islands from a Partially Interspecific Gene Pool.
Q34542493	Microevolution of the chromosomal region of acute disease antigen A (adaA) in the query (Q) fever agent Coxiella burnetii
Q28834685	Microvirga massiliensis sp. nov., the human commensal with the largest genome
Q40275733	Minimally destructive sampling of type specimens of Pyropia (Bangiales, Rhodophyta) recovers complete plastid and mitochondrial genomes
Q35979826	Mitochondrial Genome Analysis of Wild Rice (Oryza minuta) and Its Comparison with Other Related Species
Q36173302	Mitochondrial genome sequences from wild and cultivated barley (Hordeum vulgare)
Q34046316	Mitochondrial genome sequencing helps show the evolutionary mechanism of mitochondrial genome formation in Brassica
Q38693580	Mitochondrial genomes of the green macroalga Ulva pertusa (Ulvophyceae, Chlorophyta): novel insights into the evolution of mitogenomes in the Ulvophyceae.
Q28822019	Mitogenomes from type specimens, a genotyping tool for morphologically simple species: ten genomes of agar-producing red algae
Q38943970	Mixed transmission modes and dynamic genome evolution in an obligate animal-bacterial symbiosis
Q47833109	Molecular Characterization of Carbapenemase-Producing Pseudomonas aeruginosa of Czech Origin and Evidence for Clonal Spread of Extensively Resistant Sequence Type 357 Expressing IMP-7 Metallo-β-Lactamase.
Q37612963	Molecular Characterization of OXA-48-Like-Producing Enterobacteriaceae in the Czech Republic and Evidence for Horizontal Transfer of pOXA-48-Like Plasmids
Q37023201	Molecular Diversity and Plasmid Analysis of KPC-Producing Escherichia coli
Q40708783	Molecular Evolution of a Klebsiella pneumoniae ST278 Isolate Harboring blaNDM-7 and Involved in Nosocomial Transmission
Q51309103	Molecular Genetic Characterization of an Anthrabenzoxocinones Gene Cluster in Streptomyces Sp. FJS31-2 for the Biosynthesis of BE-24566B and Zunyimycin Ale.
Q35439695	Molecular analysis of asymptomatic bacteriuria Escherichia coli strain VR50 reveals adaptation to the urinary tract by gene acquisition
Q56335519	Molecular characterization of invasive meningococcal isolates in Burkina Faso as the relative importance of serogroups X and W increases, 2008-2012
Q21134546	Molecular characterization of podoviral bacteriophages virulent for Clostridium perfringens and their comparison with members of the Picovirinae
Q41547595	Molecular cloning, expression, and evolution analysis of type II CHI gene from peanut (Arachis hypogaea L.).
Q33798509	Molecular epidemiology of KPC-producing Escherichia coli: occurrence of ST131-fimH30 subclone harboring pKpQIL-like IncFIIk plasmid.
Q36879124	Molecular epidemiology of community-associated methicillin-resistant Staphylococcus aureus in the genomic era: a cross-sectional study
Q91697541	Molecular evolution of Salmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum in the field
Q34384404	Molecular evolution of trehalose-6-phosphate synthase (TPS) gene family in Populus, Arabidopsis and rice
Q36383854	Molecular signatures identify a candidate target of balancing selection in an arcD-like gene of Staphylococcus epidermidis
Q30416768	Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus
Q34780891	Molecular variation and horizontal gene transfer of the homocysteine methyltransferase gene mmuM and its distribution in clinical pathogens
Q37420457	Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana
Q28300407	Mugsy: fast multiple alignment of closely related whole genomes
Q38725234	Multi-drug resistant Klebsiella pneumoniae strains circulating in hospital setting: whole-genome sequencing and Bayesian phylogenetic analysis for outbreak investigations
Q42211317	Multidisciplinary analysis of a nontoxigenic Clostridium difficile strain with stable resistance to metronidazole
Q60916427	Multidrug Resistant Uropathogenic Escherichia coli ST405 With a Novel, Composite IS26 Transposon in a Unique Chromosomal Location
Q51477998	Multifractal analysis of HIV-1 genomes.
Q35036164	Multilocus sequence typing (MLST) and whole-genome MLST of Campylobacter jejuni isolates from human infections in three districts during a seasonal peak in Finland
Q35851848	Multiple Conserved Heteroplasmic Sites in tRNA Genes in the Mitochondrial Genomes of Terrestrial Isopods (Oniscidea)
Q92071710	Multiple Klebsiella pneumoniae KPC Clones Contribute to an Extended Hospital Outbreak
Q35867526	MupB, a new high-level mupirocin resistance mechanism in Staphylococcus aureus.
Q49453092	Mutation of Agr Is Associated with the Adaptation of Staphylococcus aureus to the Host during Chronic Osteomyelitis.
Q35047565	Mutation rate, spectrum, topology, and context-dependency in the DNA mismatch repair-deficient Pseudomonas fluorescens ATCC948.
Q57809196	Mutations on Peptidoglycan Synthesis Gene Improve Electro-transformation Efficiency of ATCC 13869
Q59604228	Mutualism between Klebsiella SGM 81 and Dianthus caryophyllus in modulating root plasticity and rhizospheric bacterial density.
Q34231400	Mycobacteriophage-drived diversification of Mycobacterium abscessus
Q92189406	Mycoheterotrophic Epirixanthes (Polygalaceae) has a typical angiosperm mitogenome but unorthodox plastid genomes
Q61802239	NGS-based phylogeny of diphtheria-related pathogenicity factors in different Corynebacterium spp. implies species-specific virulence transmission
Q38879492	NLR locus-mediated trade-off between abiotic and biotic stress adaptation in Arabidopsis.
Q47145552	Nanopore DNA Sequencing and Genome Assembly on the International Space Station.
Q40688187	Natural coinfection by Streptococcus agalactiae and Francisella noatunensis subsp. orientalis in farmed Nile tilapia (Oreochromis niloticus L.).
Q36300598	Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus
Q50199067	New Aspects on Listeria monocytogenes ST5-ECVI Predominance in a Heavily Contaminated Cheese Processing Environment.
Q90384387	New Reference Genome Sequences for 17 Bacterial Strains of the Honey Bee Gut Microbiota
Q99557422	New insights into the biodiversity of coliphages in the intestine of poultry
Q34941781	Next generation sequencing analysis of nine Corynebacterium ulcerans isolates reveals zoonotic transmission and a novel putative diphtheria toxin-encoding pathogenicity island
Q35017625	Next-generation sequencing, FISH mapping and synteny-based modeling reveal mechanisms of decreasing dysploidy in Cucumis.
Q28706241	No ancient DNA damage in Actinobacteria from the Neanderthal bone
Q34412767	Nontypeable Haemophilus influenzae genetic islands associated with chronic pulmonary infection
Q34432125	Normalized N50 assembly metric using gap-restricted co-linear chaining
Q92356291	Novel Genes and Metabolite Trends in Bifidobacterium longum subsp. infantis Bi-26 Metabolism of Human Milk Oligosaccharide 2'-fucosyllactose
Q60046108	Novel Hybrid of Typical Enteropathogenic Escherichia coli and Shiga-Toxin-Producing E. coli (tEPEC/STEC) Emerging From Pet Birds
Q36290596	Novel Type XII Staphylococcal Cassette Chromosome mec Harboring a New Cassette Chromosome Recombinase, CcrC2
Q90114620	Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
Q47139602	Novel large-scale chromosomal transfer in Bacteroides fragilis contributes to its pan-genome and rapid environmental adaptation.
Q35275857	Novel metabolic attributes of the genus cyanothece, comprising a group of unicellular nitrogen-fixing Cyanothece
Q35800514	Novel viral genomes identified from six metagenomes reveal wide distribution of archaeal viruses and high viral diversity in terrestrial hot springs
Q60960906	NovoGraph: Human genome graph construction from multiple long-read assemblies
Q34531199	Nucleoid-associated proteins affect mutation dynamics in E. coli in a growth phase-specific manner
Q34311582	Opposing regulation of PROX1 by interleukin-3 receptor and NOTCH directs differential host cell fate reprogramming by Kaposi sarcoma herpes virus.
Q44395282	Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes
Q89582797	Organelle inheritance and genome architecture variation in isogamous brown algae
Q46273272	Organization of plastid genomes in the freshwater red algal order Batrachospermales (Rhodophyta).
Q89997606	Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses
Q90422617	Outbreak of Dirkmeia churashimaensis Fungemia in a Neonatal Intensive Care Unit, India
Q91838639	Oxford Nanopore MinION Sequencing Enables Rapid Whole Genome Assembly of Rickettsia typhi in a Resource-Limited Setting
Q38604852	Oyster RNA-seq Data Support the Development of Malacoherpesviridae Genomics
Q64271431	PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes
Q49398667	PGAP-X: extension on pan-genome analysis pipeline.
Q35170101	PGAT: a multistrain analysis resource for microbial genomes
Q58729059	PGAweb: A Web Server for Bacterial Pan-Genome Analysis
Q40293006	Pan-Genome Analysis of Brazilian Lineage A Amoebal Mimiviruses
Q47249270	Pan-Genome Storage and Analysis Techniques
Q58479325	Pan-Genome of Brucella Species
Q33559212	Pan-Genomic Analysis Permits Differentiation of Virulent and Non-virulent Strains of Xanthomonas arboricola That Cohabit Prunus spp. and Elucidate Bacterial Virulence Factors.
Q92106408	Pan-Genomic and Polymorphic Driven Prediction of Antibiotic Resistance in Elizabethkingia
Q30662156	Pan-Tetris: an interactive visualisation for Pan-genomes
Q33693333	Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
Q34428816	Pan-genomic analysis provides insights into the genomic variation and evolution of Salmonella Paratyphi A.
Q28607081	Pan-genomic analysis to redefine species and subspecies based on quantum discontinuous variation: the Klebsiella paradigm
Q104111136	Pandemic Vibrio cholerae shuts down site-specific recombination to retain an interbacterial defence mechanism
Q40749385	Pangenome Evolution in the Marine Bacterium Alteromonas
Q41866629	Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia
Q36983096	Parallel Evolution in Streptococcus pneumoniae Biofilms.
Q52311064	Pathogenic adaptations of Colletotrichum fungi revealed by genome wide gene family evolutionary analyses.
Q94464356	Pathogenomes of Atypical Non-shigatoxigenic Escherichia coli NSF/SF O157:H7/NM: Comprehensive Phylogenomic Analysis Using Closed Genomes
Q43134990	Patterns and processes of Mycobacterium bovis evolution revealed by phylogenomic analyses.
Q30388274	Patterns of MHC-G-Like and MHC-B Diversification in New World Monkeys
Q21145744	Patterns of gene flow define species of thermophilic Archaea
Q64124060	Patterns of inter- and intrasubspecific homologous recombination inform eco-evolutionary dynamics of Xylella fastidiosa
Q61449168	Persistence and Microevolution of in the Cystic Fibrosis Lung: A Single-Patient Longitudinal Genomic Study
Q83227515	Phage integration alters the respiratory strategy of its host
Q47123377	Phenotypic and Genotypic Features of a Salmonella Heidelberg Strain Isolated in Broilers in Brazil and Their Possible Association to Antibiotics and Short-Chain Organic Acids Resistance and Susceptibility
Q92622761	Phoenix phylogeny, and analysis of genetic variation in a diverse collection of date palm (Phoenix dactylifera) and related species
Q34455526	Phylodynamic analysis of clinical and environmental Vibrio cholerae isolates from Haiti reveals diversification driven by positive selection
Q92854698	Phylogenetic Analysis and Substitution Rate Estimation of Colonial Volvocine Algae Based on Mitochondrial Genomes
Q35875539	Phylogenetic analysis of human Chlamydia pneumoniae strains reveals a distinct Australian indigenous clade that predates European exploration of the continent.
Q92938981	Phylogenetic determinants of toxin gene distribution in genomes of Brevibacillus laterosporus
Q35068178	Phylogenetic relationship and virulence inference of Streptococcus Anginosus Group: curated annotation and whole-genome comparative analysis support distinct species designation
Q55261904	Phylogenomic Analysis of Lactobacillus curvatus Reveals Two Lineages Distinguished by Genes for Fermenting Plant-Derived Carbohydrates.
Q57148090	Phylogenomic analysis demonstrates a pattern of rare and long-lasting concerted evolution in prokaryotes
Q38384236	Phylogenomic and structural analyses of 18 complete plastomes across nearly all families of early-diverging eudicots, including an angiosperm-wide analysis of IR gene content evolution
Q58755257	Phylogenomic evidence for ancient recombination between plastid genomes of the Cupressus-Juniperus-Xanthocyparis complex (Cupressaceae)
Q30303070	Phylogenomic reconstruction indicates mitochondrial ancestor was an energy parasite
Q41673157	Phylogenomic, Pan-genomic, Pathogenomic and Evolutionary Genomic Insights into the Agronomically Relevant Enterobacteria Pantoea ananatis and Pantoea stewartii
Q47249240	Phylogenomics
Q37368315	Phylogenomics of Brazilian epidemic isolates of Mycobacterium abscessus subsp. bolletii reveals relationships of global outbreak strains
Q36320472	Phylogeny rather than ecology or lifestyle biases the construction of Escherichia coli-Shigella genetic exchange communities.
Q36155743	Phylomark, a tool to identify conserved phylogenetic markers from whole-genome alignments
Q46319272	Physiological and ecological implications of an iron- or hydrogen-oxidizing member of the Zetaproteobacteria, Ghiorsea bivora, gen. nov., sp. nov.
Q35918313	Plasmid Characterization and Chromosome Analysis of Two netF+ Clostridium perfringens Isolates Associated with Foal and Canine Necrotizing Enteritis
Q34732534	Plasmid flux in Escherichia coli ST131 sublineages, analyzed by plasmid constellation network (PLACNET), a new method for plasmid reconstruction from whole genome sequences.
Q35104348	Plasmid-Mediated Antibiotic Resistance and Virulence in Gram-negatives: the Klebsiella pneumoniae Paradigm
Q34257215	Plasmidome interchange between Clostridium botulinum, Clostridium novyi and Clostridium haemolyticum converts strains of independent lineages into distinctly different pathogens
Q36926956	Plasmidome-analysis of ESBL-producing escherichia coli using conventional typing and high-throughput sequencing
Q52584096	Plasmids carrying DHA-1 β-lactamases.
Q88930055	Plastid Genome Degradation in the Endangered, Mycoheterotrophic, North American Orchid Hexalectris warnockii
Q50236673	Plastid Genome Evolution in the Early-Diverging Legume Subfamily Cercidoideae (Fabaceae).
Q46256405	Plastid Genome of Dictyopteris divaricata (Dictyotales, Phaeophyceae): Understanding the Evolution of Plastid Genomes in Brown Algae
Q45746566	Plastid and mitochondrial genomes of Coccophora langsdorfii (Fucales, Phaeophyceae) and the utility of molecular markers
Q35148639	Plastid and mitochondrion genomic sequences from Arctic Chlorella sp. ArM0029B
Q55264967	Plastid genome analysis of three Nemaliophycidae red algal species suggests environmental adaptation for iron limited habitats.
Q111630334	Plastid genome sequences of legumes reveal parallel inversions and multiple losses of rps16 in papilionoids
Q34493203	Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots
Q90668401	Plastid phylogenomic insights into the evolution of the Caprifoliaceae s.l. (Dipsacales)
Q52707926	Plastid phylogenomics resolves infrafamilial relationships of the Styracaceae and sheds light on the backbone relationships of the Ericales.
Q90176844	Plastome Evolution and Phylogeny of Orchidaceae, With 24 New Sequences
Q90027484	Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat
Q96135690	Plastome Structural Conservation and Evolution in the Clusioid Clade of Malpighiales
Q57143777	Plastome organization, genome-based phylogeny and evolution of plastid genes in Podophylloideae (Berberidaceae)
Q40045801	Pneumococcal 23B Molecular Subtype Identified Using Whole Genome Sequencing.
Q38736081	Pneumococcal capsule synthesis locus cps as evolutionary hotspot with potential to generate novel serotypes by recombination.
Q36849221	Polyphyly of non-bioluminescent Vibrio fischeri sharing a lux-locus deletion.
Q36062536	Polysaccharide utilisation loci of Bacteroidetes from two contrasting open ocean sites in the North Atlantic.
Q40548677	Population Evolution of Helicobacter pylori through Diversification in DNA Methylation and Interstrain Sequence Homogenization.
Q35949469	Population Structure and Antimicrobial Resistance Profiles of Streptococcus suis Serotype 2 Sequence Type 25 Strains
Q38996035	Population and evolutionary dynamics of Shiga-toxin producing Escherichia coli O157 in a beef herd: A longitudinal study
Q35035712	Population dynamics of an Acinetobacter baumannii clonal complex during colonization of patients
Q36387327	Population genomics of Chlamydia trachomatis: insights on drift, selection, recombination, and population structure.
Q46531365	Population genomics of the symbiotic plasmids of sympatric nitrogen-fixing Rhizobium species associated with Phaseolus vulgaris
Q39745174	Positional information resolves structural variations and uncovers an evolutionarily divergent genetic locus in accessions of Arabidopsis thaliana.
Q35226476	Positional orthology: putting genomic evolutionary relationships into context
Q41479266	Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas
Q97905249	Potential evolutionary impact of integrative and conjugative elements (ICEs) and genomic islands in the Ralstonia solanacearum species complex
Q64087479	Potential of the Complex to Produce 4-Hydroxy-3-Methyl-2-Alkyquinolines
Q36532705	Precision methylome characterization of Mycobacterium tuberculosis complex (MTBC) using PacBio single-molecule real-time (SMRT) technology
Q34385341	Prediction and characterization of small non-coding RNAs related to secondary metabolites in Saccharopolyspora erythraea
Q47269627	Prediction of fluoroquinolone susceptibility directly from whole genome sequence data using liquid chromatography-tandem mass spectrometry to identify mutant genotypes.
Q24609972	Predominant Acidilobus-like populations from geothermal environments in yellowstone national park exhibit similar metabolic potential in different hypoxic microbial communities
Q37677315	Predominant and substoichiometric isomers of the plastid genome coexist within Juniperus plants and have shifted multiple times during cupressophyte evolution
Q37495869	Presence and analysis of plasmids in human and animal associated arcobacter species
Q64994799	Prevalence and Diversity Analysis of Candidate Prophages to Provide An Understanding on Their Roles in Bacillus Thuringiensis.
Q64103165	Prevalence of isomeric plastomes and effectiveness of plastome super-barcodes in yews (Taxus) worldwide
Q98465453	Production of Highly Active Extracellular Amylase and Cellulase From Bacillus subtilis ZIM3 and a Recombinant Strain With a Potential Application in Tobacco Fermentation
Q101574381	Progressive Cactus is a multiple-genome aligner for the thousand-genome era
Q37110852	Progressive genome-wide introgression in agricultural Campylobacter coli
Q35351292	Progressive genomic convergence of two Helicobacter pylori strains during mixed infection of a patient with chronic gastritis
Q30402403	Promiscuous signaling by a regulatory system unique to the pandemic PMEN1 pneumococcal lineage.
Q57802938	Prophage-driven genomic structural changes promote Bartonella vertical evolution
Q46254806	Prospects on the evolutionary mitogenomics of plants: A case study on the olive family (Oleaceae).
Q38330741	Proteomic and physiological experiments to test Thermotoga neapolitana constraint-based model hypotheses of carbon source utilization
Q37408436	Proteomic and transcriptomic analyses of "Candidatus Pelagibacter ubique" describe the first PII-independent response to nitrogen limitation in a free-living Alphaproteobacterium
Q40412706	Protracted Regional Dissemination of GIM-1-Producing Serratia marcescens in Western Germany
Q58710723	Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats
Q36000569	Pyrobaculum yellowstonensis Strain WP30 Respires on Elemental Sulfur and/or Arsenate in Circumneutral Sulfidic Geothermal Sediments of Yellowstone National Park
Q34291074	Pyrosequencing-based comparative genome analysis of Vibrio vulnificus environmental isolates
Q90742457	Quantitative real-time PCR assay for the rapid identification of the intrinsically multidrug-resistant bacterial pathogen Stenotrophomonas maltophilia
Q28299505	RNA-Seq of Bacillus licheniformis: active regulatory RNA features expressed within a productive fermentation
Q60309722	Race- and Isolate-specific Molecular Marker Development through Genome-Realignment Enables Detection of Korean Isolates, Causal agents of Clubroot Disease
Q55438243	Raphidocelis subcapitata (=Pseudokirchneriella subcapitata) provides an insight into genome evolution and environmental adaptations in the Sphaeropleales.
Q36187425	Rapid divergence and expansion of the X chromosome in papaya
Q96604426	Rapid diversification of wild social groups driven by toxin-immunity loci on mobile genetic elements
Q46262604	Rapid evolutionary divergence of diploid and allotetraploid Gossypium mitochondrial genomes
Q35441451	Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins.
Q41194839	Rare Spontaneous Loss of Multiresistance Gene Carrying IncI/ST12 Plasmid in Escherichia coli in Pig Microbiota.
Q40967620	Rates and relations of mitochondrial genome evolution across the Echinoidea, with special focus on the superfamily Odontophora
Q92479063	Rates of Molecular Evolution in a Marine Synechococcus Phage Lineage
Q55283832	Rates of Mutation and Recombination in Siphoviridae Phage Genome Evolution over Three Decades.
Q91199119	Re-sequencing and optical mapping reveals misassemblies and real inversions on Corynebacterium pseudotuberculosis genomes
Q55346950	Reassessing the Role of Type II Toxin-Antitoxin Systems in Formation of Escherichia coli Type II Persister Cells.
Q28547163	Recent Origin of the Methacrylate Redox System in Geobacter sulfurreducens AM-1 through Horizontal Gene Transfer
Q38376613	Recent Outbreaks of Shigellosis in California Caused by Two Distinct Populations of Shigella sonnei with either Increased Virulence or Fluoroquinolone Resistance.
Q30427500	Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene.
Q42161312	Recent and massive expansion of the mating-type-specific region in the smut fungus Microbotryum
Q34362858	Recent diversification of a marine genus (Tursiops spp.) tracks habitat preference and environmental change
Q34064693	Recent genome reduction of Wolbachia in Drosophila recens targets phage WO and narrows candidates for reproductive parasitism
Q35895593	Recombinant transfer in the basic genome of Escherichia coli.
Q90238533	Recombination Signal in Mycobacterium tuberculosis Stems from Reference-guided Assemblies and Alignment Artefacts
Q92995608	Recombination and gene loss occur simultaneously during bacterial horizontal gene transfer
Q33987523	Recombination and population structure in Salmonella enterica.
Q35301668	Recombination drives genome evolution in outbreak-related Legionella pneumophila isolates.
Q34906024	Recombination is a key driver of genomic and phenotypic diversity in a Pseudomonas aeruginosa population during cystic fibrosis infection
Q37557711	Recombination shapes genome architecture in an organism from the archaeal domain.
Q37658150	Recombination-mediated remodelling of host-pathogen interactions during Staphylococcus aureus niche adaptation.
Q36547354	Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing
Q58751636	Reconfiguration of the plastid genome in Lamprocapnos spectabilis: IR boundary shifting, inversion, and intraspecific variation
Q39028194	Reconstructing the Ancestral Relationships Between Bacterial Pathogen Genomes.
Q45347312	Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates
Q34165459	Recovery of a medieval Brucella melitensis genome using shotgun metagenomics
Q36093084	Recurrent selection explains parallel evolution of genomic regions of high relative but low absolute differentiation in a ring species
Q91037698	Red-Brown Pigmentation of Acidipropionibacterium jensenii Is Tied to Haemolytic Activity and cyl-Like Gene Cluster
Q36178997	Refining borders of genome-rearrangements including repetitions.
Q47731698	Repeated loss of an anciently horizontally transferred gene cluster in Botrytis
Q36116473	Repeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis
Q36320957	Replacing and additive horizontal gene transfer in Streptococcus
Q38605161	Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women
Q47095097	Resequencing of the Leishmania infantum (strain JPCM5) genome and de novo assembly into 36 contigs.
Q55265556	Resistome of carbapenem- and colistin-resistant Klebsiella pneumoniae clinical isolates.
Q54944149	Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single-Molecule Real-Time sequencing.
Q93265040	Resolving the complex Bordetella pertussis genome using barcoded nanopore sequencing
Q61811669	Resource Concentration Modulates the Fate of Dissimilated Nitrogen in a Dual-Pathway Actinobacterium
Q92290258	Retrospective Analysis of Archived Pyrazinamide Resistant Mycobacterium tuberculosis Complex Isolates from Uganda-Evidence of Interspecies Transmission
Q37545723	Revealing the genetic basis of natural bacterial phenotypic divergence.
Q34469017	Revised phylogeny and novel horizontally acquired virulence determinants of the model soft rot phytopathogen Pectobacterium wasabiae SCC3193
Q34142819	Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain.
Q61811084	Role of Two-Component System Response Regulator in the Antimicrobial Resistance, Virulence, Biofilm Formation, and Stress Response of Group B Streptococcus
Q58732151	S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences
Q38414341	SRD: a Staphylococcus regulatory RNA database
Q36045356	ST2249-MRSA-III: a second major recombinant methicillin-resistant Staphylococcus aureus clone causing healthcare infection in the 1970s
Q29615052	STAR: ultrafast universal RNA-seq aligner
Q34094543	STELLAR: fast and exact local alignments
Q37076598	Salmonella Degrades the Host Glycocalyx Leading to Altered Infection and Glycan Remodeling
Q60315583	Scalable multiple whole-genome alignment and locally collinear block construction with SibeliaZ
Q55316668	Screening and characterization of prophages in Desulfovibrio genomes.
Q49874383	Screening and genomic characterization of filamentous hemagglutinin-deficient Bordetella pertussis.
Q34729667	Secondary evolution of a self-incompatibility locus in the Brassicaceae genus Leavenworthia.
Q35861030	Selection of marker genes using whole-genome DNA polymorphism analysis
Q92495671	Sensitivity to the two peptide bacteriocin plantaricin EF is dependent on CorC, a membrane-bound, magnesium/cobalt efflux protein
Q34287077	Sequence and annotation of the apicoplast genome of the human pathogen Babesia microti
Q34017517	Sequence conservation and functional constraint on intergenic spacers in reduced genomes of the obligate symbiont Buchnera
Q34430639	Sequence features contributing to chromosomal rearrangements in Neisseria gonorrhoeae
Q47249221	Sequence-Based Synteny Analysis of Multiple Large Genomes
Q46272673	Sequencing and comparative analysis of the Amblyomma sculptum mitogenome
Q28481501	Sequencing of seven haloarchaeal genomes reveals patterns of genomic flux
Q36849919	Sequential Acquisition of Virulence and Fluoroquinolone Resistance Has Shaped the Evolution of Escherichia coli ST131
Q37677305	Serial gene losses and foreign DNA underlie size and sequence variation in the plastid genomes of diatoms
Q41629945	Serotype IV Sequence Type 468 Group B Streptococcus Neonatal Invasive Disease, Minnesota, USA.
Q37093287	Serotype IV Streptococcus agalactiae ST-452 has arisen from large genomic recombination events between CC23 and the hypervirulent CC17 lineages.
Q42402455	Shallow Whole Genome Sequencing for the Assembly of Complete Chloroplast Genome Sequence of Arachis hypogaea L.
Q41928609	Shared ancestry of herpes simplex virus 1 strain Patton with recent clinical isolates from Asia and with strain KOS63.
Q41512028	Shared features of cryptic plasmids from environmental and pathogenic Francisella species
Q64132428	Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria
Q90458378	Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids
Q38674621	Short reads from honey bee (Apis sp.) sequencing projects reflect microbial associate diversity
Q37658221	Short-term evolution of Shiga toxin-producing Escherichia coli O157:H7 between two food-borne outbreaks.
Q36575141	Single-Cell-Genomics-Facilitated Read Binning of Candidate Phylum EM19 Genomes from Geothermal Spring Metagenomes
Q30832049	Single-Molecule Sequencing (PacBio) of the Staphylococcus capitis NRCS-A Clone Reveals the Basis of Multidrug Resistance and Adaptation to the Neonatal Intensive Care Unit Environment
Q33741813	Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
Q46901842	Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus.
Q36573697	Sister Dehalobacter Genomes Reveal Specialization in Organohalide Respiration and Recent Strain Differentiation Likely Driven by Chlorinated Substrates
Q49743186	Site-Specific Recombination at XerC/D Sites Mediates the Formation and Resolution of Plasmid Co-integrates Carrying a blaOXA-58- and TnaphA6-Resistance Module in Acinetobacter baumannii.
Q35730826	Split-alignment of genomes finds orthologies more accurately.
Q58763005	Spread of Carbapenem Resistance by Transposition and Conjugation Among
Q33911885	Stenotrophomonas comparative genomics reveals genes and functions that differentiate beneficial and pathogenic bacteria
Q34594416	Strain diversity of CTX-M-producing Enterobacteriaceae in individual pigs: insights into the dynamics of shedding during the production cycle
Q39177394	Strain- and plasmid-level deconvolution of a synthetic metagenome by sequencing proximity ligation products
Q35551878	Strain-level diversity of secondary metabolism in Streptomyces albus
Q37650443	Strain-level genomic variation in natural populations of Lebetimonas from an erupting deep-sea volcano.
Q57812293	Strains with Different Mobilomes and from Distinct Environments Have Comparable Phenomes
Q41531641	Streptococcus gallolyticus subsp. gallolyticus from human and animal origins: genetic diversity, antimicrobial susceptibility, and characterization of a vancomycin-resistant calf isolate carrying a vanA-Tn1546-like element.
Q91636262	Streptomyces spp. From the Marine Sponge Antho dichotoma: Analyses of Secondary Metabolite Biosynthesis Gene Clusters and Some of Their Products
Q35883534	Structurally distinct Arabidopsis thaliana NLR immune receptors recognize tandem WY domains of an oomycete effector
Q33851528	Substoichiometrically different mitotypes coexist in mitochondrial genomes of Brassica napus L
Q90858269	Sulfobacillus thermotolerans: new insights into resistance and metabolic capacities of acidophilic chemolithotrophs
Q35735874	Survey of clustered regularly interspaced short palindromic repeats and their associated Cas proteins (CRISPR/Cas) systems in multiple sequenced strains of Klebsiella pneumoniae.
Q46876216	Symbiont shift towards Rhizobium nodulation in a group of phylogenetically related Phaseolus species
Q34993189	SynTView - an interactive multi-view genome browser for next-generation comparative microorganism genomics
Q91796586	Synergetic effect of non-complementary 5' AT-rich sequences on the development of a multiplex TaqMan real-time PCR for specific and robust detection of Clavibacter michiganensis and C. michiganensis subsp. nebraskensis
Q47140891	Synergistic Antimicrobial Interaction between Honey and Phage against Escherichia coli Biofilms
Q28542786	Systematic production of inactivating and non-inactivating suppressor mutations at the relA locus that compensate the detrimental effects of complete spot loss and affect glycogen content in Escherichia coli
Q33761252	TAL effector driven induction of a SWEET gene confers susceptibility to bacterial blight of cotton.
Q35868919	TAL effectors and activation of predicted host targets distinguish Asian from African strains of the rice pathogen Xanthomonas oryzae pv. oryzicola while strict conservation suggests universal importance of five TAL effectors
Q56267127	TERribly Difficult: Searching for Telomerase RNAs in Saccharomycetes
Q36660437	Targeted genome enrichment for efficient purification of endosymbiont DNA from host DNA.
Q37231293	Tetracycline Selective Pressure and Homologous Recombination Shape the Evolution of Chlamydia suis: A Recently Identified Zoonotic Pathogen
Q35228785	The -omics Era- Toward a Systems-Level Understanding of Streptomyces
Q35293194	The Alternaria genomes database: a comprehensive resource for a fungal genus comprised of saprophytes, plant pathogens, and allergenic species
Q44874987	The Arsenic Resistance-Associated Listeria Genomic Island LGI2 Exhibits Sequence and Integration Site Diversity and a Propensity for Three Listeria monocytogenes Clones with Enhanced Virulence
Q37713748	The Bioinformatics Analysis of Comparative Genomics of Mycobacterium tuberculosis Complex (MTBC) Provides Insight into Dissimilarities between Intraspecific Groups Differing in Host Association, Virulence, and Epitope Diversity
Q50026003	The Birth and Demise of the ISApl1-mcr-1-ISApl1 Composite Transposon: the Vehicle for Transferable Colistin Resistance.
Q28829107	The Chthonomonas calidirosea Genome Is Highly Conserved across Geographic Locations and Distinct Chemical and Microbial Environments in New Zealand's Taupō Volcanic Zone
Q37724134	The Complete Chloroplast Genome Sequences of Six Rehmannia Species
Q60916388	The Complete Genome and Physiological Analysis of the Eurythermal Firmicute Exiguobacterium chiriqhucha Strain RW2 Isolated From a Freshwater Microbialite, Widely Adaptable to Broad Thermal, pH, and Salinity Ranges
Q58122125	The Complete Genome and Physiological Analysis of the Microbialite-Dwelling sp. nov; Reveals Genetic Promiscuity and Predicted Adaptations to Environmental Stress
Q96953677	The Complete Plastomes of Five Hemiparasitic Plants (Osyris wightiana, Pyrularia edulis, Santalum album, Viscum liquidambaricolum, and V. ovalifolium): Comparative and Evolutionary Analyses Within Santalales
Q41847405	The Complete Sequences and Ecological Roles of Two IncP-1β Plasmids, pHB44 and pBS64, Isolated from the Mycosphere of Laccaria proxima
Q34084439	The Comprehensive Phytopathogen Genomics Resource: a web-based resource for data-mining plant pathogen genomes
Q40397307	The Connection between Persistent, Disinfectant-Resistant Listeria monocytogenes Strains from Two Geographically Separate Iberian Pork Processing Plants: Evidence from Comparative Genome Analysis.
Q90533569	The Draft Genome of a Hydrogen-producing Cyanobacterium, Arthrospira platensis NIES-46
Q34090373	The Ellis Island Effect: A novel mobile element in a multi-drug resistant Bacteroides fragilis clinical isolate includes a mosaic of resistance genes from Gram-positive bacteria.
Q58599398	The Enterococcus Cassette Chromosome, a Genomic Variation Enabler in Enterococci
Q41692213	The Environmental Acinetobacter baumannii Isolate DSM30011 Reveals Clues into the Preantibiotic Era Genome Diversity, Virulence Potential, and Niche Range of a Predominant Nosocomial Pathogen
Q37418853	The Establishment and Diversification of Epidemic-Associated Serogroup W Meningococcus in the African Meningitis Belt, 1994 to 2012.
Q37276392	The First Complete Plastid Genome from Joinvilleaceae (J. ascendens; Poales) Shows Unique and Unpredicted Rearrangements.
Q55275042	The Genomic Basis of Intrinsic and Acquired Antibiotic Resistance in the Genus Serratia.
Q40235186	The Genomic Blueprint of Salmonella enterica subspecies enterica serovar Typhi P-stx-12.
Q34184923	The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
Q41788790	The Glycolytic Versatility of Bacteroides uniformis CECT 7771 and Its Genome Response to Oligo and Polysaccharides.
Q34676711	The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes
Q30838941	The Histidine Decarboxylase Gene Cluster of Lactobacillus parabuchneri Was Gained by Horizontal Gene Transfer and Is Mobile within the Species
Q38975496	The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement
Q97519511	The Loss of the Inverted Repeat in the Putranjivoid Clade of Malpighiales
Q51731205	The Nothoaspis amazoniensis Complete Mitogenome: A Comparative and Phylogenetic Analysis.
Q35687925	The Origin and Evolution of Baeyer-Villiger Monooxygenases (BVMOs): An Ancestral Family of Flavin Monooxygenases.
Q97521927	The Origin and Evolution of Plastid Genome Downsizing in Southern Hemispheric Cypresses (Cupressaceae)
Q40892794	The Presence of Phage Orthologous Genes in Helicobacter pylori Correlates with the Presence of the Virulence Factors CagA and VacA.
Q58043098	The Siderophore Piscibactin Is a Relevant Virulence Factor for Favored at Low Temperatures
Q37124916	The Sinorhizobium meliloti essential porin RopA1 is a target for numerous bacteriophages
Q36242810	The TIR Homologue Lies near Resistance Genes in Staphylococcus aureus, Coupling Modulation of Virulence and Antimicrobial Susceptibility
Q64092167	The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte)
Q55052595	The Use of a Combined Bioinformatics Approach to Locate Antibiotic Resistance Genes on Plasmids From Whole Genome Sequences of Salmonella enterica Serovars From Humans in Ghana.
Q42671073	The VanE operon in Enterococcus faecalis N00-410 is found on a putative integrative and conjugative element, Tn6202.
Q38631340	The Xylella fastidiosa biocontrol strain EB92-1 genome is very similar and syntenic to Pierce's disease strains
Q92495609	The antibiotic resistance and pathogenicity of a multidrug-resistant Elizabethkingia anophelis isolate
Q36004904	The bacterial pangenome as a new tool for analysing pathogenic bacteria
Q46617949	The chloroplast genome of the marine green macroalga Ulva fasciata Delile (Ulvophyceae, Chlorophyta).
Q21146716	The chloroplast genomes of Bryopsis plumosa and Tydemania expeditiones (Bryopsidales, Chlorophyta): compact genomes and genes of bacterial origin
Q21131798	The complete chloroplast and mitochondrial genomes of the green macroalga Ulva sp. UNA00071828 (Ulvophyceae, Chlorophyta)
Q46618365	The complete chloroplast genome sequence of Indian mustard (Brassica juncea L.).
Q61443790	The complete chloroplast genomes of three Betulaceae species: implications for molecular phylogeny and historical biogeography
Q21559675	The complete genome and phenome of a community-acquired Acinetobacter baumannii
Q35225572	The complete genome sequence of Escherichia coli EC958: a high quality reference sequence for the globally disseminated multidrug resistant E. coli O25b:H4-ST131 clone.
Q35653488	The complete genome sequence of Pantoea ananatis AJ13355, an organism with great biotechnological potential.
Q59350953	The complete genome sequence of a second alphabaculovirus from the true armyworm, Mythimna unipuncta: implications for baculovirus phylogeny and host specificity
Q34500793	The complete genome sequences of poxviruses isolated from a penguin and a pigeon in South Africa and comparison to other sequenced avipoxviruses
Q36088259	The complete genome, structural proteome, comparative genomics and phylogenetic analysis of a broad host lytic bacteriophage ϕD3 infecting pectinolytic Dickeya spp.
Q50456469	The complete mitochondrial genome sequence of Hepatozoon catesbianae (Apicomplexa: Coccidia: Adeleorina), a blood parasite of the green frog, Lithobates (formerly Rana) clamitans.
Q37510391	The discovery of phiAGATE, a novel phage infecting Bacillus pumilus, leads to new insights into the phylogeny of the subfamily Spounavirinae.
Q46431847	The discovery of the virulence gene ToxA in the wheat and barley pathogen Bipolaris sorokiniana
Q33553930	The distinct plastid genome structure of Maackia fauriei (Fabaceae: Papilionoideae) and its systematic implications for genistoids and tribe Sophoreae.
Q34524313	The distribution, diversity and function of predominant Thermoproteales in high-temperature environments of Yellowstone National Park
Q55341330	The dorsoventral patterning of Musca domestica embryos: insights into BMP/Dpp evolution from the base of the lower cyclorraphan flies.
Q37408471	The epidemic of extended-spectrum-β-lactamase-producing Escherichia coli ST131 is driven by a single highly pathogenic subclone, H30-Rx
Q91841455	The first clawed lobster virus Homarus gammarus nudivirus (HgNV n. sp.) expands the diversity of the Nudiviridae
Q37635410	The first complete genome sequences of the acI lineage, the most abundant freshwater Actinobacteria, obtained by whole-genome-amplification of dilution-to-extinction cultures.
Q35878208	The genome and proteome of a Campylobacter coli bacteriophage vB_CcoM-IBB_35 reveal unusual features.
Q33556693	The genome of Cardinium cBtQ1 provides insights into genome reduction, symbiont motility, and its settlement in Bemisia tabaci
Q28828499	The genome of the insecticidal Chromobacterium subtsugae PRAA4-1 and its comparison with that of Chromobacterium violaceum ATCC 12472
Q28646138	The genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibiotics
Q27322887	The genome of tolypocladium inflatum: evolution, organization, and expression of the cyclosporin biosynthetic gene cluster
Q35136495	The genome sequence of Pseudoplusia includens single nucleopolyhedrovirus and an analysis of p26 gene evolution in the baculoviruses.
Q40499804	The genomic content and context of auxiliary metabolic genes in marine cyanomyoviruses
Q22065594	The genomic landscape underlying phenotypic integrity in the face of gene flow in crows
Q47142468	The genomic study of an environmental isolate of Scedosporium apiospermum shows its metabolic potential to degrade hydrocarbons.
Q46258344	The gut virome of the protochordate model organism, Ciona intestinalis subtype A.
Q36710787	The host-range, genomics and proteomics of Escherichia coli O157:H7 bacteriophage rV5
Q92267276	The impact of antimicrobials on gonococcal evolution
Q34311625	The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification
Q33914240	The methylome of the gut microbiome: disparate Dam methylation patterns in intestinal Bacteroides dorei
Q35883524	The microbiome of the leaf surface of Arabidopsis protects against a fungal pathogen
Q59794492	The mitochondrial genome of Endoconidiophora resinifera is intron rich
Q40677567	The new macrolide-lincosamide-streptogramin B resistance gene erm(45) is located within a genomic island in Staphylococcus fleurettii
Q42062581	The novel kasugamycin 2'-N-acetyltransferase gene aac(2')-IIa, carried by the IncP island, confers kasugamycin resistance to rice-pathogenic bacteria
Q34994247	The opportunistic pathogen Propionibacterium acnes: insights into typing, human disease, clonal diversification and CAMP factor evolution
Q35857640	The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract
Q42282142	The phylogeographic pattern of Francisella tularensis in Sweden indicates a Scandinavian origin of Eurosiberian tularaemia
Q64239677	The plastid and mitochondrial genomes of Eucalyptus grandis
Q34827795	The plastid genome of Najas flexilis: adaptation to submersed environments is accompanied by the complete loss of the NDH complex in an aquatic angiosperm
Q34396266	The plastid genome of mycoheterotrophic monocot Petrosavia stellaris exhibits both gene losses and multiple rearrangements
Q34872596	The plastid genome of the red macroalga Grateloupia taiwanensis (Halymeniaceae).
Q30277187	The quest to resolve recent radiations: Plastid phylogenomics of extinct and endangered Hawaiian endemic mints (Lamiaceae).
Q40063913	The rapid in vivo evolution of Pseudomonas aeruginosa in ventilator-associated pneumonia patients leads to attenuated virulence.
Q52880633	The reduced genome of Candidatus Kinetoplastibacterium sorsogonicusi, the endosymbiont of Kentomonas sorsogonicus (Trypanosomatidae): loss of the haem-synthesis pathway.
Q31139076	The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data
Q41847178	The tRNAarg gene and engA are essential genes on the 1.7-Mb pSymB megaplasmid of Sinorhizobium meliloti and were translocated together from the chromosome in an ancestral strain.
Q33785904	The use of Oxford Nanopore native barcoding for complete genome assembly
Q40254824	The utility of multiple molecular methods including whole genome sequencing as tools to differentiate Escherichia coli O157:H7 outbreaks
Q58736029	Thermosipho spp. Immune System Differences Affect Variation in Genome Size and Geographical Distributions
Q57492066	To B or Not to B: Comparative Genomics Suggests as a Source of B Vitamins in Whiteflies
Q41849122	To tree or not to tree? Genome-wide quantification of recombination and reticulate evolution during the diversification of strict intracellular bacteria
Q47123789	Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria.
Q41771722	Towards long-read metagenomics: complete assembly of three novel genomes from bacteria dependent on a diazotrophic cyanobacterium in a freshwater lake co-culture
Q34410275	Tracing genomic variations in two highly virulent Yersinia enterocolitica strains with unequal ability to compete for host colonization
Q57168523	Tracing mother-infant transmission of bacteriophages by means of a novel analytical tool for shotgun metagenomic datasets: METAnnotatorX
Q64092163	Tracing the Evolution of the Plastome and Mitogenome in the Chloropicophyceae Uncovered Convergent tRNA Gene Losses and a Variant Plastid Genetic Code
Q30376247	Tracking Nosocomial Klebsiella pneumoniae Infections and Outbreaks by Whole-Genome Analysis: Small-Scale Italian Scenario within a Single Hospital
Q46250239	Trajectories and Drivers of Genome Evolution in Surface-Associated Marine Phaeobacter
Q36666759	Trans-Atlantic exchanges have shaped the population structure of the Lyme disease agent Borrelia burgdorferi sensu stricto
Q57147153	Transcriptional and functional analysis of subsp. exposure to tetracycline
Q41423106	Transcriptomic analysis of nickel exposure in Sphingobium sp. ba1 cells using RNA-seq
Q53707710	Transferable vancomycin resistance in clade B commensal-type Enterococcus faecium.
Q30356166	Transforming clinical microbiology with bacterial genome sequencing.
Q35677499	Transmission and microevolution of USA300 MRSA in U.S. households: evidence from whole-genome sequencing
Q64137584	Transmission of Clostridium difficile from asymptomatically colonized or infected long-term care facility residents
Q34988071	Transmission of Hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen cryptococcus gattii
Q36295908	Transmission of methicillin-resistant Staphylococcus aureus via deceased donor liver transplantation confirmed by whole genome sequencing
Q46287223	Tropical soils are a reservoir for fluorescent Pseudomonas spp. biodiversity
Q35529858	Two Phages, phiIPLA-RODI and phiIPLA-C1C, Lyse Mono- and Dual-Species Staphylococcal Biofilms.
Q34364283	Two different secondary metabolism gene clusters occupied the same ancestral locus in fungal dermatophytes of the arthrodermataceae
Q57247947	Two level parallelism and I/O reduction in genome comparisons
Q35274650	Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.
Q37432335	Two rapidly evolving genes contribute to male fitness in Drosophila
Q46851168	Two types of genetic carrier, the IncP genomic island and the novel IncP-1β plasmid, for the aac(2')-IIa gene that confers kasugamycin resistance in Acidovorax avenae ssp. avenae
Q33675068	Type 1 and type 2 strains of Mycoplasma pneumoniae form different biofilms
Q92404511	Type III Secretion System of Beneficial Rhizobacteria Pseudomonas simiae WCS417 and Pseudomonas defensor WCS374
Q35079610	UFV-P2 as a member of the Luz24likevirus genus: a new overview on comparative functional genome analyses of the LUZ24-like phages
Q37548346	Ultra deep sequencing of Listeria monocytogenes sRNA transcriptome revealed new antisense RNAs
Q64234757	Uncovering the Mechanisms of Halotolerance in the Extremely Acidophilic Members of the Genus Through Comparative Genome Analysis
Q34082912	Uncovering the prevalence and diversity of integrating conjugative elements in actinobacteria
Q35704204	Unearthing the genomes of plant-beneficial Pseudomonas model strains WCS358, WCS374 and WCS417
Q91937299	Unidirectional animal-to-human transmission of methicillin-resistant Staphylococcus aureus ST398 in pig farming; evidence from a surveillance study in southern Italy
Q44584400	Unidirectional evolutionary transitions in fungal mating systems and the role of transposable elements
Q91784820	Unprecedented Parallel Photosynthetic Losses in a Heterotrophic Orchid Genus
Q37542131	Unusual Legionnaires' outbreak in cool, dry Western Canada: an investigation using genomic epidemiology
Q34071849	Use of low-coverage, large-insert, short-read data for rapid and accurate generation of enhanced-quality draft Pseudomonas genome sequences
Q34132845	Use of whole genome sequences to develop a molecular phylogenetic framework for Rhodococcus fascians and the Rhodococcus genus
Q38364455	Use of whole-genome sequencing to trace, control and characterize the regional expansion of extended-spectrum β-lactamase producing ST15 Klebsiella pneumoniae.
Q91338654	Using phylogenomics to reconstruct phylogenetic relationships within tribe Polygonateae (Asparagaceae), with a special focus on Polygonatum
Q35825262	Using quantitative PCR with retrotransposon-based insertion polymorphisms as markers in sugarcane
Q60921027	Using the wax moth larva infection model to detect emerging bacterial pathogens
Q64901199	Utilization of Hybrid Assembly Approach to Determine the Genome of an Opportunistic Pathogenic Fungus, Candida albicans TIMM 1768.
Q40498310	Vancomycin-intermediate livestock-associated methicillin-resistant Staphylococcus aureus ST398/t9538 from swine in Brazil
Q64068023	Variable Carbon Source Utilization, Stress Resistance, and Virulence Profiles Among Listeria monocytogenes Strains Responsible for Listeriosis Outbreaks in Switzerland
Q34527151	Variable presence of the inverted repeat and plastome stability in Erodium
Q40242624	Variable virulence phenotype of Xenorhabdus bovienii (γ-Proteobacteria: Enterobacteriaceae) in the absence of their vector hosts
Q64056565	Variation among human, veterinary and environmental Mycobacterium chelonae-abscessus complex isolates observed using core genome phylogenomic analysis, targeted gene comparison, and anti-microbial susceptibility patterns
Q34358812	Variation of the virus-related elements within syntenic genomes of the hyperthermophilic Archaeon Aeropyrum
Q28278149	Vibrio natriegens as a fast-growing host for molecular biology
Q34066355	Virulence and draft genome sequence overview of multiple strains of the swine pathogen Haemophilus parasuis
Q36432773	Virus pathogen database and analysis resource (ViPR): a comprehensive bioinformatics database and analysis resource for the coronavirus research community
Q58585556	Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers' diarrhea
Q47684142	What matters in chronic Burkholderia cenocepacia infection in cystic fibrosis: Insights from comparative genomics.
Q21559496	When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes
Q34548192	Whole Genome Sequence and Comparative Genomics of the Novel Lyme Borreliosis Causing Pathogen, Borrelia mayonii
Q37054221	Whole Genome Sequencing for Genomics-Guided Investigations of Escherichia coli O157:H7 Outbreaks
Q36238637	Whole Genome Sequencing of 39 Invasive Streptococcus pneumoniae Sequence Type 199 Isolates Revealed Switches from Serotype 19A to 15B
Q46324375	Whole genome comparative analysis of four Georgian grape cultivars
Q46845531	Whole genome phylogeny of Prochlorococcus marinus group of cyanobacteria: genome alignment and overlapping gene approach
Q46260114	Whole genome sequence analysis of Mycobacterium suricattae.
Q35025669	Whole genome sequence and comparative genomic analysis of multidrug-resistant Staphylococcus capitis subsp. urealyticus strain LNZR-1.
Q34006816	Whole genome sequence comparison of vtx2-converting phages from Enteroaggregative Haemorrhagic Escherichia coli strains
Q40090676	Whole genome sequence of the Treponema pallidum subsp. pallidum strain Amoy: An Asian isolate highly similar to SS14.
Q38644330	Whole genome sequence of two Rathayibacter toxicus strains reveals a tunicamycin biosynthetic cluster similar to Streptomyces chartreusis.
Q35232923	Whole genome sequencing and analysis of plant growth promoting bacteria isolated from the rhizosphere of plantation crops coconut, cocoa and arecanut
Q60301782	Whole genome sequencing of Moraxella bovoculi reveals high genetic diversity and evidence for interspecies recombination at multiple loci
Q39092330	Whole genome sequencing of emerging multidrug resistant Candida auris isolates in India demonstrates low genetic variation
Q35315792	Whole genome sequencing of extended-spectrum β-lactamase producing Klebsiella pneumoniae isolated from a patient in Lebanon
Q34080324	Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection
Q62899027	Whole genome sequencing reveals the emergence of a Pseudomonas aeruginosa shared strain sub-lineage among patients treated within a single cystic fibrosis centre
Q37191185	Whole genomic DNA sequencing and comparative genomic analysis of Arthrospira platensis: high genome plasticity and genetic diversity
Q58086412	Whole-Genome Alignment and Comparative Annotation
Q37739627	Whole-Genome Analysis of Bartonella ancashensis, a Novel Pathogen Causing Verruga Peruana, Rural Ancash Region, Peru
Q37090582	Whole-Genome Comparative Analysis of Two Carbapenem-Resistant ST-258 Klebsiella pneumoniae Strains Isolated during a North-Eastern Ohio Outbreak: Differences within the High Heterogeneity Zones
Q35639981	Whole-Genome Sequence Analysis and Genome-Wide Virulence Gene Identification of Riemerella anatipestifer Strain Yb2.
Q33877330	Whole-Genome Sequence and Variant Analysis of W303, a Widely-Used Strain of Saccharomyces cerevisiae
Q36900774	Whole-Genome Sequence of Salmonella enterica Serovar Enteritidis Phage Type 4, Isolated from a Brazilian Poultry Farm
Q40602029	Whole-Genome Sequence of the Microcin E492-Producing Strain Klebsiella pneumoniae RYC492.
Q37740865	Whole-Genome Sequences of Burkholderia pseudomallei Isolates Exhibiting Decreased Meropenem Susceptibility
Q36000537	Whole-Genome Sequencing Allows for Improved Identification of Persistent Listeria monocytogenes in Food-Associated Environments
Q37428648	Whole-Genome Sequencing Identifies In Vivo Acquisition of a blaCTX-M-27-Carrying IncFII Transmissible Plasmid as the Cause of Ceftriaxone Treatment Failure for an Invasive Salmonella enterica Serovar Typhimurium Infection
Q36334354	Whole-Genome Sequencing of Kaposi's Sarcoma-Associated Herpesvirus from Zambian Kaposi's Sarcoma Biopsy Specimens Reveals Unique Viral Diversity
Q35849996	Whole-Genome Sequencing of Three Clonal Clinical Isolates of B. cenocepacia from a Patient with Cystic Fibrosis
Q45910767	Whole-Genome Shotgun Sequences of Three Multidrug-Resistant Mycobacterium tuberculosis Strains Isolated from Morocco.
Q24601420	Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing
Q28260735	Whole-genome assembly of Akkermansia muciniphila sequenced directly from human stool
Q40257125	Whole-genome comparative analysis of Salmonella enterica serovar Newport strains reveals lineage-specific divergence
Q34366702	Whole-genome sequence analysis of the naturally competent Acinetobacter baumannii clinical isolate A118
Q38725027	Whole-genome sequence of Streptococcus pseudopneumoniae isolate IS7493.
Q61811419	Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium
Q34917238	Whole-genome sequencing of Burkholderia pseudomallei isolates from an unusual melioidosis case identifies a polyclonal infection with the same multilocus sequence type
Q38875811	Whole-genome sequencing of Klebsiella pneumoniae MDR strain isolated in a Syrian refugee
Q33813100	Whole-genome sequencing of Mesorhizobium huakuii 7653R provides molecular insights into host specificity and symbiosis island dynamics
Q34043582	Whole-genome sequencing of a pandoravirus isolated from keratitis-inducing acanthamoeba
Q42700436	Whole-genome shotgun sequence of Rhodococcus species strain JVH1.
Q91949465	Wide crossing diversify mitogenomes of rice
Q28654973	Widespread differences in cortex DNA methylation of the "language gene" CNTNAP2 between humans and chimpanzees
Q37074494	Within-host evolution of Burkholderia pseudomallei over a twelve-year chronic carriage infection
Q34712342	Within-host evolution of Staphylococcus aureus during asymptomatic carriage.
Q36300937	Within-host whole genome analysis of an antibiotic resistant Pseudomonas aeruginosa strain sub-type in cystic fibrosis
Q34060765	Within-species lateral genetic transfer and the evolution of transcriptional regulation in Escherichia coli and Shigella.
Q36273953	Working draft genome sequence of the mesophilic acetate oxidizing bacterium Syntrophaceticus schinkii strain Sp3
Q35882384	Worldwide Population Structure, Long-Term Demography, and Local Adaptation of Helicobacter pylori.
Q35605912	YOC, A new strategy for pairwise alignment of collinear genomes
Q33953002	Yersinia enterocolitica palearctica serobiotype O:3/4--a successful group of emerging zoonotic pathogens
Q37182765	Yersinia enterocolitica-Specific Infection by Bacteriophages TG1 and ϕR1-RT Is Dependent on Temperature-Regulated Expression of the Phage Host Receptor OmpF.
Q93015802	Z/I1 Hybrid Virulence Plasmids Carrying Antimicrobial Resistance genes in S. Typhimurium from Australian Food Animal Production
Q41362082	accD nuclear transfer of Platycodon grandiflorum and the plastid of early Campanulaceae
Q64065874	gyrA and parC mutations in fluoroquinolone-resistant Neisseria gonorrhoeae isolates from Kenya
Q30664749	inTB - a data integration platform for molecular and clinical epidemiological analysis of tuberculosis.
Q33807840	nocoRNAc: characterization of non-coding RNAs in prokaryotes
Q59127806	pYR4 From a Norwegian Isolate of Is a Putative Virulence Plasmid Encoding Both a Type IV Pilus and a Type IV Secretion System
Q34543011	rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence Comparison
Q49197038	seq-seq-pan: building a computational pan-genome data structure on whole genome alignment.
Q41433006	β2-microglobulin gene duplication in cetartiodactyla remains intact only in pigs and possibly confers selective advantage to the species

P819	ADS bibcode	2010PLoSO...511147D
P356	DOI	10.1371/JOURNAL.PONE.0011147
P3181	OpenCitations bibliographic resource ID	172916
P932	PMC publication ID	2892488
P698	PubMed publication ID	20593022
P5875	ResearchGate publication ID	44889778

P50	author	Aaron Earl Darling	Q37391146
P2093	author name string	Nicole T Perna
		Bob Mau
P2860	cites work	Dynamics of genome rearrangement in bacterial populations	Q21092483
		Fast statistical alignment	Q21145358
		MUSCLE: a multiple sequence alignment method with reduced time and space complexity	Q21284290
		Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.	Q22066206
		Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"	Q22066389
		Genome sequence of enterohaemorrhagic Escherichia coli O157:H7	Q22122385
		Associations between inverted repeats and the structural evolution of bacterial genomes	Q24543817
		A comprehensive comparison of multiple sequence alignment programs	Q24548825
		ProbCons: Probabilistic consistency-based multiple sequence alignment	Q24557418
		Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics	Q24652261
		Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes	Q24673122
		Ohno's dilemma: evolution of new genes under continuous selection	Q24675391
		Versatile and open software for comparing large genomes	Q24807126
		Evidence of a large novel gene pool associated with prokaryotic genomic islands	Q24810754
		OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes	Q27860860
		Alignment of whole genomes	Q28143920
		PatternHunter: faster and more sensitive homology search	Q28212957
		Multi-break rearrangements and breakpoint re-uses: from circular to linear genomes	Q43926931
		A novel heuristic for local multiple alignment of interspersed DNA repeats	Q43989384
		Aligning multiple whole genomes with Mercator and MAVID.	Q44255740
		Integration host factor binds to a unique class of complex repetitive extragenic DNA sequences in Escherichia coli	Q48100228
		OWEN: aligning long collinear regions of genomes	Q48268757
		Efficient multiple genome alignment.	Q48625539
		Scoring pairwise genomic sequence alignments.	Q48641276
		Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes.	Q50676466
		MSOAR: a high-throughput ortholog assignment system based on genome rearrangement.	Q50869057
		Revisiting the molecular evolutionary history of Shigella spp.	Q51095151
		On the repeat-annotated phylogenetic tree reconstruction problem.	Q51930362
		Multiseed lossless filtration.	Q51931014
		GRIL: genome rearrangement and inversion locator	Q56985550
		A local alignment tool for very long DNA sequences	Q71914953
		Breakpoint Phylogenies	Q73174349
		Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs	Q28296655
		BioTorrents: a file sharing service for scientific data	Q28752578
		Genetic flux over time in the Salmonella lineage	Q28754452
		Simultaneous Bayesian gene tree reconstruction and reconciliation analysis	Q28754785
		28-way vertebrate alignment and conservation track in the UCSC Genome Browser	Q28756596
		LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA	Q28775786
		Mauve: multiple alignment of conserved genomic sequence with rearrangements	Q29547292
		Aligning multiple genomic sequences with the threaded blockset aligner	Q29547490
		VISTA : visualizing global DNA sequence alignments of arbitrary length	Q29614270
		Fast algorithms for large-scale genome alignment and comparison	Q29618357
		Homology a personal view on some of the problems	Q30011139
		Multiple alignment of protein sequences with repeats and rearrangements.	Q30357667
		Scaling up accurate phylogenetic reconstruction from gene-order data	Q30811159
		Inference of bacterial microevolution using multilocus sequence data	Q31083111
		An integrative method for accurate comparative genome mapping	Q33255322
		M-GCAT: interactively and efficiently constructing large-scale multiple genome comparison frameworks in closely related species	Q33259444
		Pairwise alignment with rearrangements.	Q33284639
		Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains	Q33286770
		Mulan: multiple-sequence local alignment and visualization for studying function and evolution	Q33596324
		An Eulerian path approach to local multiple alignment for DNA sequences	Q33819927
		Glocal alignment: finding rearrangements during alignment	Q34213425
		Efficient sorting of genomic permutations by translocation, inversion and block interchange	Q34425861
		Evolution at the nucleotide level: the problem of multiple whole-genome alignment	Q34519930
		Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli	Q34532363
		The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates	Q34803749
		The infinite sites model of genome evolution	Q34825993
		Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome	Q35840707
		Measuring the accuracy of genome-size multiple alignments	Q36672427
		Multiple sequence alignment: in pursuit of homologous DNA positions	Q36726036
		Multiple whole-genome alignments without a reference organism	Q37150890
		MAVID multiple alignment server	Q39804634
		Inferring genomic flux in bacteria	Q40027121
		A novel method for multiple alignment of sequences with repeated and shuffled elements	Q40299811
		The CHAOS/DIALIGN WWW server for multiple alignment of genomic sequences	Q41010493
		Uncertainty in homology inferences: assessing and improving genomic sequence alignment	Q42958685
P275	copyright license	Creative Commons Attribution 4.0 International	Q20007257
P6216	copyright status	copyrighted	Q50423863
P4510	describes a project that uses	MUMmer	Q6719063
P433	issue	6
P407	language of work or name	English	Q1860
P921	main subject	genomics	Q222046
		sequence alignment	Q827246
P304	page(s)	e11147
P577	publication date	2010-06-25
P1433	published in	PLOS One	Q564954
P1476	title	progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement
P478	volume	5

progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

scientific article (publication date: 25 June 2010)

Reverse relations