Fostering synergy between cell biology and systems biology.

scientific article published on 23 May 2015

Fostering synergy between cell biology and systems biology. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.TCB.2015.04.005
P932PMC publication ID4758507
P698PubMed publication ID26013981

P50authorNathan D PriceQ73223218
P2093author name stringCory C Funk
James A Eddy
P2860cites workRobust network topologies for generating switch-like cellular responsesQ21563483
KEGG: kyoto encyclopedia of genes and genomesQ24515297
Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profilesQ24536351
A whole-cell computational model predicts phenotype from genotypeQ24622101
Global reconstruction of the human metabolic network based on genomic and bibliomic dataQ24677060
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
Network biology: understanding the cell's functional organizationQ27861027
High-throughput generation, optimization and analysis of genome-scale metabolic modelsQ28291992
Modeling a snap-action, variable-delay switch controlling extrinsic cell deathQ28474253
Reconstruction of genome-scale active metabolic networks for 69 human cell types and 16 cancer types using INITQ28483779
Integrating transcriptomics with metabolic modeling predicts biomarkers and drug targets for Alzheimer's diseaseQ28542022
Evolution of Gene Regulatory Networks Controlling Body Plan DevelopmentQ28741140
A community-driven global reconstruction of human metabolism.Q29614690
Network motifs: theory and experimental approachesQ29615325
Genome-scale models of microbial cells: evaluating the consequences of constraintsQ29616789
Defining network topologies that can achieve biochemical adaptation.Q29999690
Explanation: a mechanist alternative.Q30375340
Models of signalling networks – what cell biologists can gain from them and give to themQ30413382
Pairwise network mechanisms in the host signaling response to coxsackievirus B3 infectionQ30434557
Boosting signal-to-noise in complex biology: prior knowledge is powerQ30500493
Ensemble modeling for analysis of cell signaling dynamics.Q33298494
Input-output behavior of ErbB signaling pathways as revealed by a mass action model trained against dynamic dataQ33401214
MAP kinase phosphatase as a locus of flexibility in a mitogen-activated protein kinase signaling networkQ34143691
Probabilistic integrative modeling of genome-scale metabolic and regulatory networks in Escherichia coli and Mycobacterium tuberculosis.Q34200286
Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydrataseQ34208791
Reconstruction of cellular signalling networks and analysis of their propertiesQ34385115
Reconstruction of genome-scale metabolic models for 126 human tissues using mCADREQ34509501
A system-level model for the microbial regulatory genomeQ34986584
Systematic analysis of transcription-level effects of neurodegenerative diseases on human brain metabolism by a newly reconstructed brain-specific metabolic networkQ35213003
Predicting cancer-specific vulnerability via data-driven detection of synthetic lethalityQ35235173
Constructing transcriptional regulatory networksQ36184323
Biochemical and statistical network models for systems biologyQ36903369
Rate-limiting steps in yeast protein translationQ36959359
Cytokine-induced signaling networks prioritize dynamic range over signal strengthQ37081858
In silico method for modelling metabolism and gene product expression at genome scaleQ37307600
Network motifs in integrated cellular networks of transcription-regulation and protein-protein interactionQ37645904
Recent advances in reconstruction and applications of genome-scale metabolic modelsQ37952940
Differential network biologyQ37976573
Basic and applied uses of genome‐scale metabolic network reconstructions of Escherichia coliQ38103147
Achieving stability of lipopolysaccharide-induced NF-kappaB activationQ38320977
A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migrationQ38969397
Ligand-specific c-Fos expression emerges from the spatiotemporal control of ErbB network dynamicsQ39701404
Stimulus specificity of gene expression programs determined by temporal control of IKK activityQ40372675
Designing Synthetic Regulatory Networks Capable of Self-Organizing Cell PolarizationQ41137484
Circuitry and dynamics of human transcription factor regulatory networksQ42150273
Optimizing genome-scale network reconstructionsQ46774634
P433issue8
P921main subjectcell biologyQ7141
P304page(s)440-445
P577publication date2015-05-23
P13046publication type of scholarly workreview articleQ7318358
P1433published inTrends in Cell BiologyQ1573994
P1476titleFostering synergy between cell biology and systems biology
P478volume25

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cites work (P2860)
Q38430285SBMLmod: a Python-based web application and web service for efficient data integration and model simulation
Q26781813Taking Aim at Moving Targets in Computational Cell Migration

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