Polyphasic taxonomy, a consensus approach to bacterial systematics

scientific article published on June 1996

Polyphasic taxonomy, a consensus approach to bacterial systematics is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P932PMC publication ID239450
P698PubMed publication ID8801440

P50authorPeter VandammeQ21337596
Karel KerstersQ55233176
P2093author name stringSwings J
Gillis M
Pot B
de Vos P
P2860cites workPeptidoglycan types of bacterial cell walls and their taxonomic implicationsQ24563299
Immunological properties of teichoic acidsQ24564289
Rapid determination of 16S ribosomal RNA sequences for phylogenetic analysesQ24609392
Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomesQ24625992
Bacterial evolutionQ24634394
Helicobacter bilis sp. nov., a novel Helicobacter species isolated from bile, livers, and intestines of aged, inbred miceQ24646548
Phylogenetic identification and in situ detection of individual microbial cells without cultivationQ24651527
Helicobacter hepaticus sp. nov., a microaerophilic bacterium isolated from livers and intestinal mucosal scrapings from miceQ24657755
16S ribosomal DNA sequence identities of beta-proteobacterial endosymbionts in three Crithidia speciesQ24685110
Revision of Campylobacter, Helicobacter, and Wolinella Taxonomy: Emendation of Generic Descriptions and Proposal of Arcobacter gen. novQ26254034
Proposal of Burkholderia gen. nov. and Transfer of Seven Species of the Genus Pseudomonas Homology Group II to the New Genus, with the Type Species Burkholderia cepacia (Palleroni and Holmes 1981) comb. novQ28184131
Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperatureQ28203566
Stenotrophomonas, a new bacterial genus for Xanthomonas maltophilia (Hugh 1980) Swings et al. 1983Q28261257
Thauera selenatis gen. nov., sp. nov., a member of the beta subclass of Proteobacteria with a novel type of anaerobic respirationQ28265713
Aldolase of lactic acid bacteria: a case history in the use of an enzyme as an evolutionary markerQ28775856
Detection of relationships between Streptococcus faecalis and Lactobacillus casei by immunological studies with two forms of malic enzymeQ28776709
Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typingQ29614699
Dynamics of IS-related genetic rearrangements in resting Escherichia coli K-12.Q30011203
Comparative sequence analyses of the 16S rRNA genes of Lactobacillus minutus, Lactobacillus rimae and Streptococcus parvulus: proposal for the creation of a new genus AtopobiumQ30851267
Campylobacter helveticus sp. nov., a new thermophilic species from domestic animals: characterization, and cloning of a species-specific DNA probeQ30894041
Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimensQ30915172
Taxonomic study of the Lactobacillus acidophilus group, with recognition of Lactobacillus gallinarum sp. nov. and Lactobacillus johnsonii sp. nov. and synonymy of Lactobacillus acidophilus group A3 (Johnson et al. 1980) with the type strain of LactoQ30915253
Phylogeny of Helicobacter felis sp. nov., Helicobacter mustelae, and related bacteriaQ31067441
A phylogenetic analysis of an atypical leuconostoc: description of Leuconostoc fallax sp. nov.Q31088134
Helicobacter muridarum sp. nov., a microaerophilic helical bacterium with a novel ultrastructure isolated from the intestinal mucosa of rodentsQ31106053
New spiral bacterium in gastric mucosaQ31112726
Helicobacter nemestrinae sp. nov., a spiral bacterium found in the stomach of a pigtailed macaque (Macaca nemestrina)Q33516942
Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implicationQ33625169
Characterization of "Campylobacter pyloridis" by culture, enzymatic profile, and protein contentQ37283360
Evolutionary Relationships among Eubacterial Groups as Inferred from GroEL (Chaperonin) Sequence ComparisonsQ37888777
Use of DNA reassociation in bacterial classificationQ38193905
Classification of Pseudomonas diminuta Leifson and Hugh 1954 and Pseudomonas vesicularis Büsing, Döll, and Freytag 1953 in Brevundimonas gen. nov. as Brevundimonas diminuta comb. nov. and Brevundimonas vesicularis comb. nov., respectivelyQ38569690
Chemotaxonomic analyses of Bacteroides gracilis and Bacteroides ureolyticus and reclassification of B. gracilis as Campylobacter gracilis comb. nov.Q38571959
DNA homology studies of the catalase-negative campylobacters and "Campylobacter fecalis," an emended description of Campylobacter sputorum, and proposal of the neotype strain of Campylobacter sputorumQ38590140
Comparative studies of lactic acid dehydrogenases in lactic acid bacteria. I. Purification and kinetics of the allosteric L-lactic acid dehydrogenase from Lactobacillus casei ssp. casei and Lactobacillus curvatusQ39139102
Investigation of an outbreak of Campylobacter upsaliensis in day care centers in Brussels: analysis of relationships among isolates by phenotypic and genotypic typing methods.Q39373335
Aldolases of the lactic acid bacteria. Demonstration of immunological relationships among eight genera of Gram positive bacteria using an anti-pediococcal aldolase serumQ39421471
Lipopolysaccharides of Pseudomonas spp. that stimulate plant growth: composition and use for strain identificationQ39956275
Effect of alanine ester substitution and other structural features of lipoteichoic acids on their inhibitory activity against autolysins of Staphylococcus aureusQ39973785
Distribution of polyamines in methanogenic bacteria.Q39976104
Bacteremia caused by a novel Bordetella species, "B. hinzii".Q40180688
Length polymorphisms in tRNA intergenic spacers detected by using the polymerase chain reaction can distinguish streptococcal strains and species.Q40186535
Characterization of Leuconostoc lactis strains from human sources.Q40202207
Evaluation of the indoxyl acetate hydrolysis test for rapid differentiation of Campylobacter, Helicobacter, and Wolinella speciesQ40202903
Isoprenoid quinones of Campylobacter cryaerophila, C. cinaedi, C. fennelliae, C. hyointestinalis, C. pylori, and "C. upsaliensis".Q40210445
Differentiation of Lactococcus lactis and Lactococcus garvieae from humans by comparison of whole-cell protein patternsQ40214449
DNA relatedness among strains of Campylobacter jejuni and Campylobacter coli with divergent serogroup and hippurate reactions.Q40218815
30 years of campylobacters: biochemical characteristics and a biotyping proposal for Campylobacter jejuni.Q40224056
Cellular fatty acid composition of Campylobacter fetus.Q40230194
Campylobacter-Wolinella group organisms are the only oral bacteria that form arylsulfatase-active colonies on a synthetic indicator mediumQ40426934
Molecular epidemiology: application of contemporary techniques to the typing of microorganismsQ40859383
Identification of mesophilic lactic acid bacteria by using polymerase chain reaction-amplified variable regions of 16S rRNA and specific DNA probesQ41895060
Use of tRNA consensus primers to indicate subgroups of Pseudomonas solanacearum by polymerase chain reaction amplificationQ42105887
The phylogenetic relations of DNA-dependent RNA polymerases of archaebacteria, eukaryotes, and eubacteriaQ42641544
Transfer of several phytopathogenic Pseudomonas species to Acidovorax as Acidovorax avenae subsp. avenae subsp. nov., comb. nov., Acidovorax avenae subsp. citrulli, Acidovorax avenae subsp. cattleyae, and Acidovorax konjaciQ42697994
The cellular fatty acid composition of Campylobacter species isolated from cases of enteritis in man and animalsQ42789803
Identification of 'Campylobacter upsaliensis' and other catalase-negative campylobacters from paediatric blood cultures by numerical analysis of electrophoretic protein patternsQ43018365
Numerical analysis of electrophoretic protein patterns of Campylobacter laridis and allied thermophilic campylobacters from the natural environmentQ43018959
Deoxyribonucleic Acid Homology and Base Composition in Some Thermophilic LactobacilliQ43020123
Deoxyribonucleic acid sequence relatedness between thermophilic members of the genus CampylobacterQ43021650
Discrimination among thermophilic Campylobacter species by polymerase chain reaction amplification of 23S rRNA gene fragmentsQ43022760
Identification of Bacteria by Computer: Identification of Reference StrainsQ43484157
How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identityQ43731813
Characterization of Campylobacter cinaedi and C. fennelliae antigens and analysis of the human immune responseQ44457292
Ultrastructure of a spiral micro-organism from pig gastric mucosa ("Gastrospirillum suis").Q44551245
DNA amplification fingerprinting using very short arbitrary oligonucleotide primersQ44669656
Classification of medically important clostridia using restriction endonuclease site differences of PCR-amplified 16S rDNAQ44679076
Cytochrome composition and oxygen-dependent respiration-driven proton translocation in Wolinella curva, Wolinella recta, Bacteroides ureolyticus, and Bacteroides gracilisQ44896179
Wolinella recta, Wolinella curva, Bacteroides ureolyticus, and Bacteroides gracilis Are Microaerophiles, Not AnaerobesQ44938888
Inter- and Intrafamilial Similarities of rRNA Cistrons of the PasteurellaceaeQ45311854
Identification of Xenobiotic-Degrading Isolates from the Beta Subclass of the Proteobacteria by a Polyphasic Approach Including 16S rRNA Partial SequencingQ45312025
Phylogenetic Analysis of Rhizobia and Agrobacteria Based on 16S rRNA Gene SequencesQ45312136
Comparative Ribosomal Protein Sequence Analyses of a Phylogenetically Defined Genus, Pseudomonas, and Its RelativesQ45312492
Properties of D-lactate dehydrogenase from Lactobacillus bulgaricus: a possible different evolutionary origin for the D- and L-lactate dehydrogenasesQ45812775
Rapid identification of bacteria of the Comamonadaceae with amplified ribosomal DNA-restriction analysis (ARDRA)Q46457207
Electrophoretic protein typing of Campylobacter jejuni subspecies "doylei" (nitrate-negative campylobacter-like organisms) from human faeces and gastric mucosa.Q46584660
A comparison using gel electrophoresis of cell proteins of campylobacters (vibrios) associated with infertility, abortion and swine dysenteryQ47908919
PCR-amplified length polymorphisms in tRNA intergenic spacers for categorizing staphylococciQ48171322
Characterization and identification of Vagococcus fluvialis strains isolated from domestic animalsQ49167913
Identification and Classification of Lactobacillus Acidophilus, L. Gasseri and L. Johnsonii Strains by SDS-PAGE and rRNA-Targeted Oligonucleotide Probe HybridizationQ49168667
Interlaboratory comparative study of the numerical analysis of one-dimensional sodium dodecyl sulphate-polyacrylamide gel electrophoretic protein patterns of Campylobacter strainsQ49170778
The Quantitative Measurement of DNA Hybridization from Renaturation RatesQ50241672
Batch procedure for thermal elution of DNA from hydroxyapatiteQ50243999
Improved Preparation of Lipoteichoic AcidsQ52499079
Genetic and phenotypic characteristics of a new group of Campylobacter isolated from pigs and cattle.Q54479755
Phylogenetic diversity and position of the genus Campylobacter.Q54768216
Ribosomal ribonucleic acid gene restriction patterns as potential taxonomic tools.Q54776562
Specific detection of Campylobacter concisus by PCR amplification of 23S rDNA areasQ57265623
Improvements of the membrane filter method for DNA:rRNA hybridizationQ66881443
Identification and Grouping of Bacteria Numerical Analysis of their Electrophoretic Protein PatternsQ66945842
Chemotaxonomic significance of the xanthomonadins, novel brominated aryl-polyene pigments produced by bacteria of the genus XanthomonasQ67650565
Electrophoretic protein patterns in Campylobacter species with special reference to Campylobacter mucosalis and Campylobacter hyointestinalisQ68003490
Compilation of 5S rRNA and 5S rRNA gene sequencesQ68353873
Electrophoretic characterization of lactic dehydrogenases in the genus LactobacillusQ68619553
The relationship between mismatched base pairs and the thermal stability of DNA duplexes. II. Effects of deamination of cytosineQ69262176
Strain variation in Campylobacter pylori detected by numerical analysis of one-dimensional electrophoretic protein patternsQ69673748
Formation of halogenated aryl-polyene (xanthomonadin) pigments by the type and other yellow-pigmented strains of Xanthomonas maltophiliaQ69791625
Differential characteristics of catalase-positive campylobacters correlated with DNA homology groupsQ70614452
Cellular fatty acid profiles of campylobactersQ71077752
Alanine ester-containing native lipoteichoic acids do not act as lipoteichoic acid carrier. Isolation, structural and functional characterizationQ71185836
Use of DEAE-cellulose filters in the S1 nuclease method for bacterial deoxyribonucleic acid hybridizationQ71230946
The dynamic progression of evolved character states for aromatic amino acid biosynthesis in gram-negative bacteriaQ71678709
Description of bacteria able to degrade isoquinoline in pure cultureQ72162985
Phylogenetic relationships of Bacteria based on comparative sequence analysis of elongation factor Tu and ATP-synthase beta-subunit genesQ72188135
Differentiation between Xanthomonas campestris pv. oryzae, Xanthomonas campestris pv. oryzicola and the bacterial 'brown blotch' pathogen on rice by numerical analysis of phenotypic features and protein gel electrophoregramsQ72381618
Polyacrylamide gel electrophoresis of spiral bacteria from the gastric antrumQ72580571
Evolution of prokaryotic genomesQ72693831
Amitriptyline and chronic low-back pain. A randomized double-blind crossover studyQ72801062
The classification of Lactobacilli from the human mouthQ73881584
Benchmarking--a conversation with Robert C. Camp. The source. Interview by Joe FlowerQ74761564
BASE DNA CONTENT AND CLASSIFICATION OF VIBRIOSQ76664770
An antigenic analysis of Lactobacillus acidophilusQ79381696
The teichoic acidsQ93785919
[Composition and use of bacterial cultures for therapeutic purposes]Q93788194
Comparative studies on lactobacilli from the faeces of man, swine and chickensQ93794646
Campylobacter hyoilei sp. nov., associated with porcine proliferative enteritisQ36716077
Grouping of lactic streptococci by gel electrophoresis of soluble cell extractsQ36728995
Identification of lactobacilli from sourdough and description of Lactobacillus pontis sp. nov.Q36750395
Helicobacter canis sp. nov., a new species from dogs: an integrated study of phenotype and genotypeQ36757296
Taxonomic studies on some leuconostoc-like organisms from fermented sausages: description of a new genus Weissella for the Leuconostoc paramesenteroides group of speciesQ36761263
Use of a Single-Strand Specific Nuclease for Analysis of Bacterial and Plasmid Deoxyribonucleic Acid Homo- and HeteroduplexesQ36765253
An uncultured gastric spiral organism is a newly identified Helicobacter in humansQ36765484
Phylogeny of species in the family Neisseriaceae isolated from human dental plaque and description of Kingella oralis sp. nov [corrected]Q36766507
Deoxyribonucleic Acid Hybridization Among Strains of LactobacilliQ36773288
Five new Legionella species isolated from waterQ36783003
Immunological relationships among lactic dehydrogenases in the genera Lactobacillus and LeuconostocQ36794175
Comparative biochemical and immunological study of malic enzyme from two species of lactic acid bacteria: evolutionary implicationsQ36794199
Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.Q37059958
Polyamines in microorganisms.Q37061401
Three supplementary diagnostic tests for Campylobacter species and related organismsQ37066552
Assessment of enzyme detection tests useful in identification of campylobacteriaQ37118162
Molecular epidemiology of Pseudomonas cepacia determined by polymerase chain reaction ribotypingQ37125372
Outbreak of recurrent abdominal cramps associated with Arcobacter butzleri in an Italian schoolQ37126653
Typing of group B streptococci: comparison of pulsed-field gel electrophoresis and conventional electrophoresisQ37127904
Differentiation of Campylobacter and Campylobacter-like organisms by cellular fatty acid compositionQ37139783
Oligonucleotide probe for detection and identification of Campylobacter pyloriQ37163414
Identification and classification of Campylobacter strains by using nonradioactive DNA probesQ37168818
Cellular fatty acid composition of Campylobacter pylori from primates and ferrets compared with those of other campylobactersQ37172909
Identification of EF group 22 campylobacters from gastroenteritis cases as Campylobacter concisusQ37178286
Identification of Campylobacter cinaedi isolated from blood and feces of children and adult femalesQ37182898
Characterization and description of "Campylobacter upsaliensis" isolated from human fecesQ37183002
Evaluation of the indoxyl acetate hydrolysis test for the differentiation of CampylobactersQ37185681
Hydrolysis of indoxyl acetate by Campylobacter speciesQ37217752
Reproducibility of tolerance tests that are useful in the identification of campylobacteriaQ37241952
Oligodeoxynucleotide probes for Campylobacter fetus and Campylobacter hyointestinalis based on 16S rRNA sequencesQ37242073
Differentiation of Streptococcus uberis from Streptococcus parauberis by polymerase chain reaction and restriction fragment length polymorphism analysis of 16S ribosomal DNAQ37246762
Isoprenoid quinone content and cellular fatty acid composition of Campylobacter speciesQ37264793
Differentiation of Campylobacter species by protein banding patterns in polyacrylamide slab gelsQ37269024
???Q28270221
Taxonomic notes: a proposal for recording the properties of putative taxa of procaryotesQ34060460
The ribosomal RNA database projectQ34111986
Phylogeny of Helicobacter Isolates from Bird and Swine Feces and Description of Helicobacter pametensis sp. novQ34292310
Campylobacter showae sp. nov., Isolated from the Human Oral CavityQ34306979
Numerical analysis of 295 phenotypic features of 266 Xanthomonas strains and related strains and an improved taxonomy of the genusQ34324487
Transfer of Kingella indologenes (Snell and Lapage 1976) to the genus Suttonella gen. nov. as Suttonella indologenes comb. nov.; transfer of Bacteroides nodosus (Beveridge 1941) to the genus Dichelobacter gen. nov. as Dichelobacter nodosus comb. novQ34324508
Helicobacter acinonyx sp. nov., isolated from cheetahs with gastritisQ34355027
Phylogeny of 54 representative strains of species in the family Pasteurellaceae as determined by comparison of 16S rRNA sequencesQ34358561
Telluria mixta (Pseudomonas mixta Bowman, Sly, and Hayward 1988) gen. nov., comb. nov., and Telluria chitinolytica sp. nov., soil-dwelling organisms which actively degrade polysaccharidesQ34359856
Intraspecific variation in small-subunit rRNA sequences in GenBank: why single sequences may not adequately represent prokaryotic taxaQ34374131
THE INFLUENCE OF NONCOMPLEMENTARY BASES ON THE STABILITY OF ORDERED POLYNUCLEOTIDESQ34418609
Acidophilus milk products: a review of potential benefits to consumersQ34434070
Applications of cellular fatty acid analysisQ34625406
Lipopolysaccharides as Determinants of Serological Variability in Pseudomonas corrugataQ35678490
Development and application of oligonucleotide probes for identification of Lactococcus lactis subsp. cremorisQ35691675
DNA polymorphisms amplified by arbitrary primers are useful as genetic markersQ35888035
Fingerprinting genomes using PCR with arbitrary primersQ35894620
Leptospira species categorized by arbitrarily primed polymerase chain reaction (PCR) and by mapped restriction polymorphisms in PCR-amplified rRNA genesQ35908452
Compilation of small ribosomal subunit RNA sequencesQ35921184
Rapid Identification of Rhizobia by Restriction Fragment Length Polymorphism Analysis of PCR-Amplified 16S rRNA Genes.Q36050116
Campylobacter pylori, the spiral bacterium associated with human gastritis, is not a true Campylobacter sp.Q36237853
Short, interspersed repetitive DNA sequences in prokaryotic genomes.Q36294767
Comparative allostery of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase as an indicator of taxonomic relatedness in pseudomonad generaQ36321388
Characterization of Wolinella spp., Campylobacter concisus, Bacteroides gracilis, and Eikenella corrodens by polyacrylamide gel electrophoresisQ36463290
Bordetella holmesii sp. nov., a new gram-negative species associated with septicemiaQ36516891
Polyphasic Taxonomy of the Genus Vibrio: Numerical Taxonomy of Vibrio cholerae, Vibrio parahaemolyticus , and Related Vibrio SpeciesQ36559009
DNA fingerprinting of medically important microorganisms by use of PCRQ36641217
Use of ribotyping in epidemiological surveillance of nosocomial outbreaksQ36641669
The similarities between Pseudomonas paucimobilis and allied bacteria derived from analysis of deoxyribonucleic acids and electrophoretic protein patternsQ36652366
Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematicsQ36665422
Rhizobium ciceri sp. nov., Consisting of Strains That Nodulate Chickpeas (Cicer arietinum L.)Q36675768
Proposal to reclassify Leuconostoc oenos as Oenococcus oeni [corrig.] gen. nov., comb. nov..Q36678228
Identification of Enterococcus species isolated from foods of animal originQ36683608
Bordetella hinzii sp. nov., isolated from poultry and humansQ36716064
P433issue2
P304page(s)407-438
P577publication date1996-06-01
P1433published inMicrobiological ReviewsQ26842868
P1476titlePolyphasic taxonomy, a consensus approach to bacterial systematics
P478volume60

Reverse relations

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Q41022473Diversity and plant growth promoting properties of rhizobia isolated from root nodules of Ononis arvensis
Q36055553Diversity of extremophilic bacteria in the sediment of high-altitude lakes located in the mountain desert of Ojos del Salado volcano, Dry-Andes
Q30831691Effect of restriction endonucleases on assessment of biodiversity of cultivable polar marine planktonic bacteria by amplified ribosomal DNA restriction analysis
Q33975615Emergence of diverse Helicobacter species in the pathogenesis of gastric and enterohepatic diseases
Q33543961Environmental distribution of prokaryotic taxa
Q35317693Evaluation of biochemical and molecular methods for Lactobacillus reuteri strains differentiation
Q33262739Evolutionary genomics of lactic acid bacteria
Q35197531Fast and accurate identification of Xenorhabdus and Photorhabdus species by restriction analysis of PCR-amplified 16S rRNA genes
Q80867124Fatty acid composition of planktonic species of Anabaena (cyanobacteria) with coiled trichomes exhibited a significant taxonomic value
Q33964030Fluorescent amplified fragment length polymorphism probabilistic database for identification of bacterial isolates from urinary tract infections
Q24550554Formation of hyodeoxycholic acid from muricholic acid and hyocholic acid by an unidentified gram-positive rod termed HDCA-1 isolated from rat intestinal microflora
Q26800805From cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystems
Q52234521Functional phylogeny: the use of the sensitivity of ribosomes to protein synthesis inhibitors as a tool to study the evolution of organisms.
Q55101736GET_PHYLOMARKERS, a Software Package to Select Optimal Orthologous Clusters for Phylogenomics and Inferring Pan-Genome Phylogenies, Used for a Critical Geno-Taxonomic Revision of the Genus Stenotrophomonas.
Q30885748Gene sequence-based criteria for identification of new rickettsia isolates and description of Rickettsia heilongjiangensis sp. nov.
Q33721870Gene structure and transcriptional organization of the dnaK operon of Bifidobacterium breve UCC 2003 and application of the operon in bifidobacterial tracing
Q34098025Genetic and transcriptional organization of the clpC locus in Bifidobacterium breve UCC 2003.
Q24529981Genetic heterogeneity in Bacillus sporothermodurans as demonstrated by ribotyping and repetitive extragenic palindromic-PCR fingerprinting
Q64098942Genome and pan-genome analysis to classify emerging bacteria
Q36525881Genome sequence and analysis of Lactobacillus helveticus
Q34329280Genome sequence-based species delimitation with confidence intervals and improved distance functions
Q58719422Genome-Based Taxonomic Classification of the Phylum
Q47194248Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae
Q48262869Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential
Q30408281Genomic heterogeneity and ecological speciation within one subspecies of Bacillus subtilis
Q33635225Genomic relatedness of Chlamydia isolates determined by amplified fragment length polymorphism analysis.
Q34959599Genomic taxonomy of the genus prochlorococcus.
Q34165056Guide to designing, conducting, publishing and communicating results of clinical studies involving probiotic applications in human participants
Q39445854Healthy cats are commonly colonized with "Helicobacter heilmannii" that is associated with minimal gastritis.
Q31051257High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
Q30883636Hymenobacter terrae sp. nov., a bacterium isolated from soil
Q90388785Identification and Characterization of a Cell Wall Hydrolase for Sporangiospore Maturation in Actinoplanes missouriensis
Q30453679Identification and characteristics of a novel Burkholderia strain with broad-spectrum antimicrobial activity
Q37159237Identification of Lactobacillus UFV H2B20 (probiotic strain) using DNA-DNA hybridization
Q34012197Identification of Lactobacillus isolates from the gastrointestinal tract, silage, and yoghurt by 16S-23S rRNA gene intergenic spacer region sequence comparisons
Q39803404Identification of N2-fixing plant- and fungus-associated Azoarcus species by PCR-based genomic fingerprints
Q30389831Identification of a marine Bacillus strain C5 and parathion-methyl degradation characteristics of the extracellular esterase B1.
Q33962670Identification of and hydrogen peroxide production by fecal and vaginal lactobacilli isolated from Japanese women and newborn infants
Q33293392Identification of discriminative characteristics for clusters from biologic data with InforBIO software
Q31918055Identification of lactic acid bacteria from chili bo, a Malaysian food ingredient
Q31047947Identification of oxalotrophic bacteria by neural network analysis of numerical phenetic data.
Q29248802Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets
Q36885630Increased species diversity and extended habitat range of sulfur-oxidizing Thiomicrospira spp.
Q89697139Interactions between Kazachstania humilis Yeast Species and Lactic Acid Bacteria in Sourdough
Q43017453Intraspecific comparative analysis of the species Salinibacter ruber
Q33200035Isolation and biodiversity of hitherto undescribed soil bacteria related to Bacillus niacini
Q34340653Isolation and characterization of novel bacterial taxa from extreme alkali-saline soil
Q33752084LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria.
Q43618622Labeling quality and molecular characterization studies of products containing Lactobacillus spp. strains.
Q33959322Lactobacillus species identification, H2O2 production, and antibiotic resistance and correlation with human clinical status.
Q28600918MALDI-TOF Mass Spectrometry Discriminates Known Species and Marine Environmental Isolates of Pseudoalteromonas
Q33233232Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the discrimination of food-borne microorganisms
Q35362310Merging taxonomy with ecological population prediction in a case study of Vibrionaceae
Q34248365Metabolic classification of microbial genomes using functional probes
Q28821556Microbial culturomics unravels the halophilic microbiota repertoire of table salt: description of Gracilibacillus massiliensis sp. nov
Q42621557Microbial ecology of the soppressata of Vallo di Diano, a traditional dry fermented sausage from southern Italy, and in vitro and in situ selection of autochthonous starter cultures
Q35074674Microbial genomic taxonomy
Q35961957Microbial species delineation using whole genome sequences
Q42727688Misidentifying Helicobacter cinadei
Q51380308Modern molecular approaches for analyzing microbial diversity from mushroom compost ecosystem.
Q33283537Molecular approaches: advantages and artifacts in assessing bacterial diversity
Q42275820Molecular characterization of Lactobacillus plantarum DMDL 9010, a strain with efficient nitrite degradation capacity
Q33986835Molecular diversity within Lactobacillus helveticus as revealed by genotypic characterization
Q40226590Molecular microbial analysis of lactobacillus strains isolated from the gut of calves for potential probiotic use.
Q28279777Molecular procedure for rapid detection of Burkholderia mallei and Burkholderia pseudomallei
Q42165754Multidrug efflux systems in Escherichia coli and Enterobacter cloacae obtained from wholesome broiler carcasses
Q30666629Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria
Q33644372Mycobacterium ulcerans and other mycolactone-producing mycobacteria should be considered a single species
Q31148094Myxobacterial biodiversity in an established oak-hickory forest and a savanna restoration site
Q41096411New Microbes New Infections promotes modern prokaryotic taxonomy: a new section "TaxonoGenomics: new genomes of microorganisms in humans"
Q35140971Niche differentiation in nitrogen metabolism among methanotrophs within an operational taxonomic unit
Q30848175Non-contiguous finished genome sequence and description of Paucisalibacillus algeriensis sp. nov
Q47804275Noncontiguous finished genome sequence and description of Mediterranea massiliensis gen. nov., sp. nov., a new member of the Bacteroidaceae family isolated from human colon
Q28833617Noncontiguous finished genome sequence and description of Planococcus massiliensis sp. nov., a moderately halophilic bacterium isolated from the human gut
Q34078552Novel microbiological and spatial statistical methods to improve strength of epidemiological evidence in a community-wide waterborne outbreak
Q33647929PCR-DGGE analysis of bacterial population attached to the bovine rumen wall.
Q90448900Paenibacillus strains with nitrogen fixation and multiple beneficial properties for promoting plant growth
Q34079836Pattern of elemental release during the granite dissolution can be changed by aerobic heterotrophic bacterial strains isolated from Damma Glacier (central Alps) deglaciated granite sand
Q33682704Phenotypic and genotypic characterization of clinical strains of CDC group IVc-2.
Q44628902Phenotypic and genotypic identification of lactic acid bacteria isolated from traditional pickles of the Çubuk region in Turkey
Q33605901Phenotypic characterization of Astragalus glycyphyllos symbionts and their phylogeny based on the 16S rDNA sequences and RFLP of 16S rRNA gene
Q90223097Phenotypic characterization of rhizobia nodulating legumes Genista microcephala and Argyrolobium uniflorum growing under arid conditions
Q30836550Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil
Q43098737Photoprotective bioactivity present in a unique marine bacteria collection from Portuguese deep sea hydrothermal vents
Q30577225Phylogenetic analysis of Ara+ and Ara- Burkholderia pseudomallei isolates and development of a multiplex PCR procedure for rapid discrimination between the two biotypes
Q48069224Phylogenetic analysis of Mycoplasma suis isolates based on 16S rRNA gene sequence in China
Q39848519Phylogenetic analysis of hemoplasma species: an international study
Q21559535Phylogenetic diversity of the Bacillus pumilus group and the marine ecotype revealed by multilocus sequence analysis
Q46704373Phylogenetic diversity on housekeeping and symbiotic genes of rhizobial from Sphaerophysa in China.
Q28828631Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae
Q33408562Phylogeny in aid of the present and novel microbial lineages: diversity in Bacillus
Q30818990Polyphasic analysis of Thermus isolates from geothermal areas in Iceland
Q28483953Polyphasic approach of bacterial classification - An overview of recent advances
Q39484235Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations
Q39621290Polyphasic taxonomy of symbiotic rhizobia from wild leguminous plants growing in Egypt
Q39562791Prevalence of Clostridium botulinum in Finnish trout farms: pulsed-field gel electrophoresis typing reveals extensive genetic diversity among type E isolates.
Q24675394Prokaryote diversity and taxonomy: current status and future challenges
Q64890573Propionibacterium acnes and Acne Vulgaris: New Insights from the Integration of Population Genetic, Multi-Omic, Biochemical and Host-Microbe Studies.
Q33592477Propionibacterium acnes types I and II represent phylogenetically distinct groups
Q74359945Protein profile and biochemical properties of Bacillus circulans isolated from intestines of small free-living animals in Poland
Q60304663Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics
Q30913394Pseudomonas aeruginosa population structure revisited
Q30883762Pseudomonas isolation and identification: an introduction to the challenges of polyphasic taxonomy
Q33990227Rapid identification and differentiation of the soft rot erwinias by 16S-23S intergenic transcribed spacer-PCR and restriction fragment length polymorphism analyses
Q28822018Reclassification of the taxonomic status of SEMIA3007 isolated in Mexico B-11A Mex as Rhizobium leguminosarum bv. viceae by bioinformatic tools
Q36320324Reconciliation between operational taxonomic units and species boundaries
Q36627096Reflections on plant and soil nematode ecology: past, present and future
Q30481141Revised minimal standards for description of new species of the class Mollicutes (division Tenericutes).
Q44896282Rhodotorula mucilaginosa, a carotenoid producing yeast strain from a Patagonian high-altitude lake
Q33975727Role of genomic typing in taxonomy, evolutionary genetics, and microbial epidemiology
Q50069617Salmonella, Campylobacter and Enterococcus spp.: their antimicrobial resistance profiles and their spatial relationships in a synoptic study of the Upper Oconee River basin.
Q30399744Search and discovery strategies for biotechnology: the paradigm shift
Q33985459Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis
Q36230500Sepsis and Hemocyte Loss in Honey Bees (Apis mellifera) Infected with Serratia marcescens Strain Sicaria.
Q33744108Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads
Q36633669Sequences, sequence clusters and bacterial species
Q24536317Siderophore typing, a powerful tool for the identification of fluorescent and nonfluorescent pseudomonads
Q35634636Similarity and differences in the Lactobacillus acidophilus group identified by polyphasic analysis and comparative genomics
Q54230124Specific oligonucleotide primers for detection of endoglucanase positive Bacillus subtilis by PCR.
Q24675858Stepping stones towards a new prokaryotic taxonomy
Q34489358Substrate utilization of stress tolerant methylotrophs isolated from revegetated heavy metal polluted coalmine spoil
Q34185169Supercritical fluid extraction and ultra performance liquid chromatography of respiratory quinones for microbial community analysis in environmental and biological samples.
Q33226571Surface microflora of four smear-ripened cheeses
Q30805908Synergistic antimicrobial activity of metabolites produced by a nonobligate bacterial predator
Q64053789TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
Q33973532Taxonomy and identification of the Burkholderia cepacia complex
Q91787766Taxonomy and systematics of plant probiotic bacteria in the genomic era
Q37840290Taxonomy of bacterial fish pathogens.
Q28829492Tessaracoccus massiliensis sp. nov., a new bacterial species isolated from the human gut
Q34231065The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003.
Q39511689The Genus Lactobacillus: A Taxonomic Update.
Q33261434The bacterial species definition in the genomic era.
Q35623904The evolution and population structure of Lactobacillus fermentum from different naturally fermented products as determined by multilocus sequence typing (MLST).
Q35153183The microbial diversity of traditional spontaneously fermented lambic beer.
Q29616595The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota
Q42121778The tomato rhizosphere, an environment rich in nitrogen-fixing Burkholderia species with capabilities of interest for agriculture and bioremediation
Q24534992Tick-borne rickettsioses around the world: emerging diseases challenging old concepts
Q33261438Towards a conceptual and operational union of bacterial systematics, ecology, and evolution
Q97885558Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
Q28078908Understanding pine wilt disease: roles of the pine endophytic bacteria and of the bacteria carried by the disease-causing pinewood nematode
Q34355991Unexpectedly diverse Mesorhizobium strains and Rhizobium leguminosarum nodulate native legume genera of New Zealand, while introduced legume weeds are nodulated by Bradyrhizobium species
Q33725291Use of fatty acid methyl ester profiles for discrimination of Bacillus cereus T-strain spores grown on different media
Q36513003Using oligonucleotide suspension arrays for laboratory identification of bacteria responsible for bacteremia
Q37367495Vibrio cholerae in the environment: a simple method for reliable identification of the species.
Q92188692Whole-Genome Sequencing and Bioinformatics as Pertinent Tools to Support Helicobacteracae Taxonomy, Based on Three Strains Suspected to Belong to Novel Helicobacter Species
Q30489478Worldwide prevalence of class 2 integrases outside the clinical setting is associated with human impact
Q39639653Yeast species associated with orange juice: evaluation of different identification methods

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