| scholarly article | Q13442814 |
| review article | Q7318358 |
| P50 | author | Eugene Koonin | Q3699974 |
| Kira Makarova | Q63964276 | ||
| P2860 | cites work | A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action | Q21203780 |
| Genome trees constructed using five different approaches suggest new major bacterial clades | Q21284133 | ||
| The COG database: an updated version includes eukaryotes | Q21284294 | ||
| The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract | Q22066219 | ||
| Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM | Q22066384 | ||
| The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533 | Q22066391 | ||
| Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus | Q22122115 | ||
| Complete genome sequence of Lactobacillus plantarum WCFS1 | Q24550776 | ||
| The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403 | Q24618705 | ||
| Comparative genomics of the lactic acid bacteria | Q24678967 | ||
| Towards understanding the first genome sequence of a crenarchaeon by genome annotation using clusters of orthologous groups of proteins (COGs) | Q24791695 | ||
| Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes | Q24797719 | ||
| Crystal structure of manganese catalase from Lactobacillus plantarum | Q27635222 | ||
| A genomic perspective on protein families | Q27860913 | ||
| Orthologs, paralogs, and evolutionary genomics | Q29615399 | ||
| Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements | Q29615788 | ||
| Horizontal gene transfer in prokaryotes: quantification and classification | Q29616017 | ||
| Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin | Q29617073 | ||
| Phylogenetic test of the molecular clock and linearized trees | Q29618226 | ||
| Using the COG database to improve gene recognition in complete genomes | Q30644430 | ||
| Lineage-specific gene expansions in bacterial and archaeal genomes | Q30662261 | ||
| Genome data mining of lactic acid bacteria: the impact of bioinformatics | Q30920970 | ||
| Divercin V41, a new bacteriocin with two disulphide bonds produced by Carnobacterium divergens V41: primary structure and genomic organization | Q31982251 | ||
| Lactic acid bacteria - Genetics, metabolism and application | Q81819376 | ||
| Acquired antibiotic resistance in lactic acid bacteria from food | Q33757951 | ||
| The PASTA domain: a beta-lactam-binding domain | Q34148324 | ||
| Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environment | Q34232704 | ||
| Genome-wide molecular clock and horizontal gene transfer in bacterial evolution | Q34349262 | ||
| Lactic acid bacteria of foods and their current taxonomy | Q34427435 | ||
| Bacteriocins: developing innate immunity for food | Q34456947 | ||
| The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K. | Q34465686 | ||
| The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution | Q34534856 | ||
| Multireplicon genome architecture of Lactobacillus salivarius | Q34538652 | ||
| BAGEL: a web-based bacteriocin genome mining tool. | Q34547998 | ||
| New insights in the molecular biology and physiology of Streptococcus thermophilus revealed by comparative genomics. | Q34560429 | ||
| Lantibiotics produced by lactic acid bacteria: structure, function and applications. | Q34944718 | ||
| Discovering lactic acid bacteria by genomics | Q34944853 | ||
| Tracing the evolution of gene loss in obligate bacterial symbionts | Q35565617 | ||
| Evolution of minimal-gene-sets in host-dependent bacteria. | Q35618738 | ||
| Exploration of antimicrobial potential in LAB by genomics | Q35744494 | ||
| The long and winding road from the research laboratory to industrial applications of lactic acid bacteria. | Q36151332 | ||
| Nucleotide metabolism and its control in lactic acid bacteria | Q36151337 | ||
| Flavour formation by lactic acid bacteria and biochemical flavour profiling of cheese products | Q36151342 | ||
| Comparative and functional genomics of lactococci | Q36152373 | ||
| Lessons from the genomes of bifidobacteria | Q36153923 | ||
| Overview on sugar metabolism and its control in Lactococcus lactis - the input from in vivo NMR. | Q36153928 | ||
| Genomic features of lactic acid bacteria effecting bioprocessing and health | Q36167045 | ||
| Genomic analysis of Oenococcus oeni PSU-1 and its relevance to winemaking | Q36241770 | ||
| Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches | Q36241774 | ||
| Polyphasic taxonomy, a consensus approach to bacterial systematics | Q36671831 | ||
| Reduced content of lysyl-phosphatidylglycerol in the cytoplasmic membrane affects susceptibility to moenomycin, as well as vancomycin, gentamicin, and antimicrobial peptides, in Staphylococcus aureus | Q38333913 | ||
| Formation of thiolated nucleosides present in tRNA from Salmonella enterica serovar Typhimurium occurs in two principally distinct pathways. | Q40469099 | ||
| Characterisation of the diol dehydratase pdu operon of Lactobacillus collinoides. | Q42676264 | ||
| Antimicrobial susceptibility of starter culture bacteria used in Norwegian dairy products | Q43693641 | ||
| Characterization of urease genes cluster of Streptococcus thermophilus | Q44695183 | ||
| Expression, purification, crystallization and preliminary characterization of uridine 5'-diphospho-N-acetylmuramoyl L-alanyl-D-glutamate:lysine ligase (MurE) from Streptococcus pneumoniae 110K/70. | Q44745412 | ||
| A Phylogenetic Analysis of Lactobacilli, Pediococcus pentosaceus and Leuconostoc mesenteroides. | Q47580135 | ||
| EPPS: mining the COG database by an extended phylogenetic patterns search | Q52018403 | ||
| Comparative and functional genomics of lactococci | Q56337599 | ||
| Genomic features of lactic acid bacteria effecting bioprocessing and health | Q57232606 | ||
| Overview on sugar metabolism and its control in – The input from in vivo NMR | Q57997839 | ||
| P433 | issue | 4 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | genomics | Q222046 |
| lactic acid bacteria | Q13360072 | ||
| P304 | page(s) | 1199-1208 | |
| P577 | publication date | 2006-11-03 | |
| P1433 | published in | Journal of Bacteriology | Q478419 |
| P1476 | title | Evolutionary genomics of lactic acid bacteria | |
| P478 | volume | 189 |
| Q42044957 | A broad range of themes in Microbial Biotechnology |
| Q90091206 | A riboswitch gives rise to multi-generational phenotypic heterogeneity in an auxotrophic bacterium |
| Q42120636 | Analysis of the Lactobacillus metabolic pathway. |
| Q48279118 | Application of directed evolution to develop ethanol tolerant Oenococcus oeni for more efficient malolactic fermentation |
| Q34528837 | Assessment of the diversity of dairy Lactococcus lactis subsp. lactis isolates by an integrated approach combining phenotypic, genomic, and transcriptomic analyses |
| Q41658903 | Biofilm Formation on Stainless Steel by Streptococcus thermophilus UC8547 in Milk Environments Is Mediated by the Proteinase PrtS |
| Q35818658 | CRISPR-based screening of genomic island excision events in bacteria |
| Q24675921 | Carnobacterium: positive and negative effects in the environment and in foods |
| Q64064964 | Characterization of genomic DNA of lactic acid bacteria for activation of plasmacytoid dendritic cells |
| Q52565813 | Clustering of Pan- and Core-genome of Lactobacillus provides Novel Evolutionary Insights for Differentiation. |
| Q61805103 | Comparative Genome Analysis of Indicates Niche Adaptation and Resolves Genotype/Phenotype Disparity |
| Q36983148 | Comparative Genomics of Two Closely Related Wolbachia with Different Reproductive Effects on Hosts |
| Q34401636 | Comparative functional genomics of Lactobacillus spp. reveals possible mechanisms for specialization of vaginal lactobacilli to their environment |
| Q35121866 | Comparative genome analysis of Lactobacillus rhamnosus clinical isolates from initial stages of dental pulp infection: identification of a new exopolysaccharide cluster |
| Q33415362 | Comparative genomics of lactic acid bacteria reveals a niche-specific gene set |
| Q41363193 | Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04 |
| Q41038341 | Complete Genome Sequence of Bifidobacterium longum GT15: Identification and Characterization of Unique and Global Regulatory Genes |
| Q28650289 | Complete genome sequence and transcriptomics analyses reveal pigment biosynthesis and regulatory mechanisms in an industrial strain, Monascus purpureus YY-1 |
| Q35826729 | Complete genome sequence of the dairy isolate Streptococcus macedonicus ACA-DC 198. |
| Q58785846 | Conserved Genome Organization and Core Transcriptome of the Complex |
| Q34006070 | Determining the genetic diversity of lactobacilli from the oral cavity. |
| Q35108845 | Development of a strain-specific real-time PCR assay for enumeration of a probiotic Lactobacillus reuteri in chicken feed and intestine |
| Q40524285 | Distribution and functions of phosphotransferase system genes in the genome of the lactic acid bacterium Oenococcus oeni |
| Q64103208 | Draft Genome Sequence of Lactobacillus plantarum EBKLp545, Isolated from Piglet Feces |
| Q46725065 | Ecophysiology of the developing total bacterial and lactobacillus communities in the terminal small intestine of weaning piglets |
| Q41838720 | Enhancing probiotic stability in industrial processes |
| Q33809972 | Evolutionary history of the OmpR/IIIA family of signal transduction two component systems in Lactobacillaceae and Leuconostocaceae. |
| Q38716851 | Experimental evolution and the adjustment of metabolic strategies in lactic acid bacteria |
| Q91720733 | Fecal microbiota transplantation in an elderly patient with mental depression |
| Q35671137 | Folate production by probiotic bacteria |
| Q38993577 | Fructophilic lactic acid bacteria inhabit fructose-rich niches in nature |
| Q28651539 | Genome Diversity of Spore-Forming Firmicutes |
| Q42797429 | Genome Sequence of Lactobacillus sakei subsp. sakei LS25, a Commercial Starter Culture Strain for Fermented Sausage |
| Q37185713 | Genome analysis of food grade lactic Acid-producing bacteria: from basics to applications |
| Q37343252 | Genome reduction as the dominant mode of evolution |
| Q36525881 | Genome sequence and analysis of Lactobacillus helveticus |
| Q42793234 | Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum |
| Q37333636 | Genome-scale analyses of health-promoting bacteria: probiogenomics |
| Q42920166 | Genome-scale diversity and niche adaptation analysis of Lactococcus lactis by comparative genome hybridization using multi-strain arrays. |
| Q34718364 | Genome-scale genotype-phenotype matching of two Lactococcus lactis isolates from plants identifies mechanisms of adaptation to the plant niche |
| Q34377045 | Genomic adaptation of the Lactobacillus casei group |
| Q34261147 | Genomic encyclopedia of type strains of the genus Bifidobacterium |
| Q64929045 | Genomic insights into a robust gamma-aminobutyric acid-producer Lactobacillus brevis CD0817. |
| Q37273408 | Genomics of dairy fermentations |
| Q38787287 | Genomics of lactic acid bacteria: Current status and potential applications |
| Q41478989 | Heme and menaquinone induced electron transport in lactic acid bacteria |
| Q90024225 | Honeybee-Specific Lactic Acid Bacterium Supplements Have No Effect on American Foulbrood-Infected Honeybee Colonies |
| Q37824816 | Horizontal gene transfer amongst probiotic lactic acid bacteria and other intestinal microbiota: what are the possibilities? A review. |
| Q35996428 | Human microbiome versus food-borne pathogens: friend or foe. |
| Q38241740 | Implications of new research and technologies for malolactic fermentation in wine. |
| Q36324135 | Improvement of identification methods for honeybee specific Lactic Acid Bacteria; future approaches. |
| Q41372171 | In silico prediction of horizontal gene transfer events in Lactobacillus bulgaricus and Streptococcus thermophilus reveals protocooperation in yogurt manufacturing |
| Q57274154 | Indigenous Lactic Acid Bacteria Communities Associated with Spontaneous Malolactic Fermentations in Patagonian Wines: Basic and Applied Aspects |
| Q33752084 | LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria. |
| Q27011331 | Lactic acid bacteria contribution to gut microbiota complexity: lights and shadows |
| Q37405358 | Metabolism of fructophilic lactic acid bacteria isolated from Apis mellifera L. bee-gut: a focus on the phenolic acids as external electron acceptors. |
| Q34232235 | Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution. |
| Q47715485 | Microbial genome analysis: the COG approach |
| Q41966356 | Molecular description and industrial potential of Tn6098 conjugative transfer conferring alpha-galactoside metabolism in Lactococcus lactis. |
| Q34629039 | Molecular dialogue between the human gut microbiota and the host: a Lactobacillus and Bifidobacterium perspective |
| Q41928001 | Multilocus sequence typing of Oenococcus oeni: detection of two subpopulations shaped by intergenic recombination |
| Q50325559 | Oenococcus oeni in Chilean Red Wines: Technological and Genomic Characterization |
| Q36898061 | Oral immunization with recombinant lactobacillus plantarum induces a protective immune response in mice with Lyme disease |
| Q41303342 | Phylogenomic Analysis of Oenococcus oeni Reveals Specific Domestication of Strains to Cider and Wines |
| Q42106532 | Phylogenomic reconstruction of lactic acid bacteria: an update |
| Q42035001 | Physiology and substrate specificity of two closely related amino acid transporters, SerP1 and SerP2, of Lactococcus lactis |
| Q35976909 | Probiogenomics as a tool to obtain genetic insights into adaptation of probiotic bacteria to the human gut. |
| Q39024657 | Probiotics, D-Lactic acidosis, oxidative stress and strain specificity |
| Q33589695 | Proteins of novel lactic acid bacteria from Apis mellifera mellifera: an insight into the production of known extra-cellular proteins during microbial stress. |
| Q58383212 | Resolution of Phenotypically Distinct Strains of Enterococcus spp. in a Complex Microbial Community Using cpn60 Universal Target Sequencing |
| Q36422173 | Role of hypermutability in the evolution of the genus Oenococcus |
| Q44317857 | Selective carbohydrate utilization by lactobacilli and bifidobacteria |
| Q64078823 | Systems Biology - A Guide for Understanding and Developing Improved Strains of Lactic Acid Bacteria |
| Q36157418 | The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae. |
| Q28245116 | The genital econiche: focus on microbiota and bacterial vaginosis |
| Q34492421 | The genomics of microbial domestication in the fermented food environment |
| Q57265506 | The genus Lactobacillus |
| Q56831661 | The genus Pediococcus |
| Q33290837 | The unconventional Xer recombination machinery of Streptococci/Lactococci |
| Q37360378 | Timely approaches to identify probiotic species of the genus Lactobacillus |
| Q41327457 | Tracing lifestyle adaptation in prokaryotic genomes |
| Q28476410 | Transcriptional analysis of Lactobacillus brevis to N-butanol and ferulic acid stress responses |
| Q64066032 | Uncovering carbohydrate metabolism through a genotype-phenotype association study of 56 lactic acid bacteria genomes |
| Q57169435 | Vector Development Timeline for Mucosal Vaccination and Treatment of Disease Using and Design Approaches of Next Generation Food Grade Plasmids |
| Q42791950 | Wine genomics |
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