Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution.

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Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1101/GR.121285.111
P932PMC publication ID3246198
P698PubMed publication ID22080491
P5875ResearchGate publication ID51796017

P50authorHerwig BachmannQ59683160
Douwe MolenaarQ42109562
P2093author name stringMichiel Kleerebezem
Johan E T van Hylckama Vlieg
Marjo J C Starrenburg
P2860cites workGenes but not genomes reveal bacterial domestication of Lactococcus lactisQ21135776
Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilusQ22122115
Genome evolution and adaptation in a long-term experiment with Escherichia coliQ22122199
The Beagle in a bottleQ22122206
Mutations of Bacteria from Virus Sensitivity to Virus ResistanceQ24533278
The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403Q24618705
Comparative genomics of the lactic acid bacteriaQ24678967
Role of mutator alleles in adaptive evolution.Q54564129
Improved cloning vectors and transformation procedure for Lactococcus lactis.Q54656595
Two plasmid-determined restriction and modification systems in Streptococcus lactisQ72387488
Transport of beta-casein-derived peptides by the oligopeptide transport system is a crucial step in the proteolytic pathway of Lactococcus lactisQ72428545
Novel sucrose transposons from plant strains of Lactococcus lactisQ73084459
Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatchesQ74632291
Characterization of lactococci isolated from minimally processed fresh fruit and vegetablesQ77925715
Time-resolved genetic responses of Lactococcus lactis to a dairy environmentQ83081783
Ribose catabolism of Escherichia coli: characterization of the rpiB gene encoding ribose phosphate isomerase B and of the rpiR gene, which is involved in regulation of rpiB expressionQ24684647
Long-term experimental evolution in Escherichia coli. XI. Rejection of non-transitive interactions as cause of declining rate of adaptationQ24794572
Mixed-culture transcriptome analysis reveals the molecular basis of mixed-culture growth in Streptococcus thermophilus and Lactobacillus bulgaricusQ28294713
Statistical Issues in cDNA Microarray Data AnalysisQ30788312
Evolutionary genomics of lactic acid bacteriaQ33262739
Fluctuation analysis CalculatOR: a web tool for the determination of mutation rate using Luria-Delbruck fluctuation analysisQ33430666
Chromosomal diversity in Lactococcus lactis and the origin of dairy starter culturesQ34232312
Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environmentQ34232704
Evolution of high mutation rates in experimental populations of E. coliQ34429727
The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolutionQ34534856
Fitness evolution and the rise of mutator alleles in experimental Escherichia coli populations.Q34616140
Amelioration of the cost of conjugative plasmid carriage in Eschericha coli K12.Q34619299
Diversity analysis of dairy and nondairy Lactococcus lactis isolates, using a novel multilocus sequence analysis scheme and (GTG)5-PCR fingerprintingQ34692168
Genome-scale genotype-phenotype matching of two Lactococcus lactis isolates from plants identifies mechanisms of adaptation to the plant nicheQ34718364
Oligopeptides are the main source of nitrogen for Lactococcus lactis during growth in milkQ35185291
Cloning and expression of the Lactococcus lactis subsp. cremoris SK11 gene encoding an extracellular serine proteinaseQ35232542
Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363.Q35759658
Gene inactivation in Lactococcus lactis: branched-chain amino acid biosynthesisQ36103034
Gene inactivation in Lactococcus lactis: histidine biosynthesisQ36103041
Transcription attenuation-mediated control of leu operon expression: influence of the number of Leu control codonsQ36131374
Branched-chain amino acid biosynthesis genes in Lactococcus lactis subsp. lactisQ36139508
Natural diversity and adaptive responses of Lactococcus lactis.Q36413904
Spontaneously Arising mutL Mutators in Evolving Escherichia coli Populations Are the Result of Changes in Repeat LengthQ36474342
Proteomic signature of Lactococcus lactis NCDO763 cultivated in milkQ39799250
Simultaneous loss of proteinase- and lactose-utilizing enzyme activities in Streptococcus lactis and reversal of loss by transduction.Q39861240
Selection of Protease-Positive and Protease-Negative Variants of Streptococcus cremorisQ39924023
Complete genome sequence of Lactococcus lactis subsp. lactis KF147, a plant-associated lactic acid bacterium.Q40332895
The proteolytic systems of lactic acid bacteriaQ41174198
Snowdrift game dynamics and facultative cheating in yeastQ41200215
High local substrate availability stabilizes a cooperative trait.Q41887235
Molecular description and industrial potential of Tn6098 conjugative transfer conferring alpha-galactoside metabolism in Lactococcus lactis.Q41966356
Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutationsQ42676209
Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescaleQ46069507
Spontaneous mutators in bacteria: insights into pathways of mutagenesis and repairQ46617407
Overall control of nitrogen metabolism in Lactococcus lactis by CodY, and possible models for CodY regulation in Firmicutes.Q46844372
A chloride-inducible acid resistance mechanism in Lactococcus lactis and its regulationQ48040020
An equivalence principle for the incorporation of favorable mutations in asexual populations.Q50736355
Experimental evolution of bet hedging.Q51645840
P4510describes a project that useslimmaQ112236343
P433issue1
P921main subjectdomesticationQ11395
Lactococcus lactisQ133598
P304page(s)115-124
P577publication date2011-11-11
P1433published inGenome ResearchQ5533485
P1476titleMicrobial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution
P478volume22

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cites work (P2860)
Q36120188A specific mutation in the promoter region of the silent cel cluster accounts for the appearance of lactose-utilizing Lactococcus lactis MG1363
Q41907009Adaptation of Lactococcus lactis to high growth temperature leads to a dramatic increase in acidification rate.
Q83454138Adapting to domesticity
Q60912386Adaption to glucose limitation is modulated by the pleotropic regulator CcpA, independent of selection pressure strength
Q59136928Adaptive Evolution of Industrial Under Cell Envelope Stress Provides Phenotypic Diversity
Q38118393Adaptive laboratory evolution -- principles and applications for biotechnology
Q48279118Application of directed evolution to develop ethanol tolerant Oenococcus oeni for more efficient malolactic fermentation
Q37143418Availability of public goods shapes the evolution of competing metabolic strategies
Q41310867Cell Surface Properties of Lactococcus lactis Reveal Milk Protein Binding Specifically Evolved in Dairy Isolates
Q35973181Chromosomal Copy Number Variation in Saccharomyces pastorianus Is Evidence for Extensive Genome Dynamics in Industrial Lager Brewing Strains.
Q61805103Comparative Genome Analysis of Indicates Niche Adaptation and Resolves Genotype/Phenotype Disparity
Q39759555Comparing mutation rates under the Luria-Delbrück protocol
Q35876477Correlation of Lactobacillus rhamnosus Genotypes and Carbohydrate Utilization Signatures Determined by Phenotype Profiling.
Q36886401Deciphering a unique biotin scavenging pathway with redundant genes in the probiotic bacterium Lactococcus lactis
Q47712491Disruption of a Transcriptional Repressor by an Insertion Sequence Element Integration Leads to Activation of a Novel Silent Cellobiose Transporter in Lactococcus lactis MG1363.
Q41822965Diversity in robustness of Lactococcus lactis strains during heat stress, oxidative stress, and spray drying stress
Q37185179Ecological robustness of the gut microbiota in response to ingestion of transient food-borne microbes
Q57174769Experimental Design, Population Dynamics, and Diversity in Microbial Experimental Evolution
Q38716851Experimental evolution and the adjustment of metabolic strategies in lactic acid bacteria
Q38260194Experimental microbial evolution: history and conceptual underpinnings
Q26823314Fermented foods as experimentally tractable microbial ecosystems
Q37334038Food environments select microorganisms based on selfish energetic behavior.
Q34139851Functional genomics of lactic acid bacteria: from food to health
Q57232684Further Elucidation of Galactose Utilization in MG1363
Q39764533Genome instability in Lactobacillus rhamnosus GG.
Q34636688Genotype-phenotype matching analysis of 38 Lactococcus lactis strains using random forest methods
Q34997570Genotypic adaptations associated with prolonged persistence of Lactobacillus plantarum in the murine digestive tract
Q27012450Growth and adaptation of microorganisms on the cheese surface
Q38241740Implications of new research and technologies for malolactic fermentation in wine.
Q38178115Kimchi microflora: history, current status, and perspectives for industrial kimchi production
Q64102053Laboratory Evolution of a × Hybrid Under Simulated Lager-Brewing Conditions
Q35079613Laboratory divergence of Methylobacterium extorquens AM1 through unintended domestication and past selection for antibiotic resistance
Q41875206Lactococcus lactis metabolism and gene expression during growth on plant tissues
Q90280757Lager-brewing yeasts in the era of modern genetics
Q33918664Local domestication of lactic acid bacteria via cassava beer fermentation
Q43231261Long-term diversity and genome adaptation of Acinetobacter baylyi in a minimal-medium chemostat
Q38515559Metabolism at evolutionary optimal States.
Q38055376Microbial evolution in vivo and in silico: methods and applications.
Q41095114Monoamine oxidase and transaminase screening: biotransformation of 2-methyl-6-alkylpiperidines by Neopestalotiopsis sp. CBMAI 2030
Q38097922Nutrition, population growth and disease: a short history of lactose
Q35762881Phenotypic convergence in bacterial adaptive evolution to ethanol stress
Q41303342Phylogenomic Analysis of Oenococcus oeni Reveals Specific Domestication of Strains to Cider and Wines
Q36220009Plasmid Complement of Lactococcus lactis NCDO712 Reveals a Novel Pilus Gene Cluster
Q42118118Polymorphisms, Chromosomal Rearrangements, and Mutator Phenotype Development during Experimental Evolution of Lactobacillus rhamnosus GG.
Q45769408Quantitative physiology of Lactococcus lactis at extreme low-growth rates
Q26741272Stress Physiology of Lactic Acid Bacteria
Q64078823Systems Biology - A Guide for Understanding and Developing Improved Strains of Lactic Acid Bacteria
Q38214898The Lactococcus lactis plasmidome: much learnt, yet still lots to discover
Q92544990The emergence of adaptive laboratory evolution as an efficient tool for biological discovery and industrial biotechnology
Q36157418The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae.
Q34492421The genomics of microbial domestication in the fermented food environment
Q47927849The nature of laboratory domestication changes in freshly isolated Escherichia coli strains
Q41085294The plasmid complement of Lactococcus lactis UC509.9 encodes multiple bacteriophage resistance systems
Q58122109Transcriptome Analysis of a Spray Drying-Resistant Subpopulation Reveals a Zinc-Dependent Mechanism for Robustness in SK11
Q46325566Unleashing natural competence in Lactococcus lactis by induction of the competence regulator ComX.
Q59266665Why Are Weissella spp. Not Used as Commercial Starter Cultures for Food Fermentation?

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