scholarly article | Q13442814 |
P50 | author | Didier Raoult | Q915676 |
Pierre-Édouard Fournier | Q21337923 | ||
Michel Drancourt | Q59314790 | ||
P2860 | cites work | From functional genomics to functional immunomics: new challenges, old problems, big rewards | Q21145681 |
Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species | Q21146381 | ||
The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite | Q21563620 | ||
Advanced sequencing technologies and their wider impact in microbiology | Q22065268 | ||
Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain | Q22065445 | ||
Genomic Sequence of an Otitis Media Isolate of Nontypeable Haemophilus influenzae: Comparative Study with H. influenzae Serotype d, Strain KW20 | Q22065451 | ||
Complete Genome Sequence of Rickettsia typhi and Comparison with Sequences of Other Rickettsiae | Q22065455 | ||
Genome sequence of Yersinia pestis KIM | Q22065462 | ||
Complete Genome Sequence of Yersinia pestis Strains Antiqua and Nepal516: Evidence of Gene Reduction in an Emerging Pathogen | Q22065490 | ||
Comparative Genomic Analysis of Chlamydia trachomatis Oculotropic and Genitotropic Strains | Q22065493 | ||
Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete | Q22065559 | ||
Complete Genome Sequence of Yersinia pestis Strain 91001, an Isolate Avirulent to Humans | Q22066072 | ||
Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks | Q22066331 | ||
Molecular genetic anatomy of inter- and intraserotype variation in the human bacterial pathogen group A Streptococcus | Q22066388 | ||
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome" | Q22066389 | ||
Genome sequence of Streptococcus agalactiae, a pathogen causing invasive neonatal disease | Q22121956 | ||
Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18 | Q22122370 | ||
Genome sequence of Yersinia pestis, the causative agent of plague | Q22122371 | ||
Massive gene decay in the leprosy bacillus | Q22122381 | ||
The genome sequence of Rickettsia prowazekii and the origin of mitochondria | Q22122428 | ||
Obesity alters gut microbial ecology | Q24531503 | ||
Diversity of the human intestinal microbial flora | Q24544241 | ||
The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression | Q24548344 | ||
Microevolution and history of the plague bacillus, Yersinia pestis | Q24558763 | ||
Use of highly variable intergenic spacer sequences for multispacer typing of Rickettsia conorii strains | Q24558855 | ||
Genotyping, Orientalis-like Yersinia pestis, and plague pandemics | Q24604095 | ||
Metagenomic analysis of the human distal gut microbiome | Q24633486 | ||
Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis | Q24642708 | ||
Host-induced epidemic spread of the cholera bacterium | Q24657125 | ||
Molecular evolution and host adaptation of Bordetella spp.: phylogenetic analysis using multilocus enzyme electrophoresis and typing with three insertion sequences | Q24676722 | ||
Molecular identification by "suicide PCR" of Yersinia pestis as the agent of medieval black death | Q24679324 | ||
Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms | Q24685491 | ||
Evaluation and selection of tandem repeat loci for Streptococcus pneumoniae MLVA strain typing | Q24812371 | ||
Comparative genomics of multidrug resistance in Acinetobacter baumannii | Q25256737 | ||
An obesity-associated gut microbiome with increased capacity for energy harvest | Q27860515 | ||
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd | Q27860765 | ||
Microbial ecology: human gut microbes associated with obesity | Q27861004 | ||
Genome and virulence determinants of high virulence community-acquired MRSA | Q28202214 | ||
Whole genome sequencing of meticillin-resistant Staphylococcus aureus | Q28202807 | ||
Multilocus Sequence Typing and Evolutionary Relationships among the Causative Agents of Melioidosis and Glanders, Burkholderia pseudomallei and Burkholderia mallei | Q28202846 | ||
Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis | Q28217152 | ||
Toward a genome-wide systems biology analysis of host-pathogen interactions in group A Streptococcus | Q35094453 | ||
Genome-scale microbial in silico models: the constraints-based approach. | Q35101082 | ||
Metabolic pathways in the post-genome era. | Q35135595 | ||
How far have we reached in tuberculosis vaccine development? | Q35592360 | ||
Chips with everything: DNA microarrays in infectious diseases | Q35661216 | ||
Development of rationally designed nucleic acid signatures for microbial pathogens | Q35770554 | ||
Revisiting the pestilence of Helicobacter pylori: insights into geographical genomics and pathogen evolution | Q35780872 | ||
Staphylococcus aureus: superbug, super genome? | Q35847075 | ||
DNA microarray analysis of genome dynamics in Yersinia pestis: insights into bacterial genome microevolution and niche adaptation. | Q35892606 | ||
Molecular typing of Mycobacterium tuberculosis by using nine novel variable-number tandem repeats across the Beijing family and low-copy-number IS6110 isolates | Q35922092 | ||
Molecular genetic methods for the diagnosis of fastidious microorganisms | Q36003056 | ||
Genetic methods for detection of antimicrobial resistance | Q36003062 | ||
Application of microbial genomic science to advanced therapeutics | Q36014733 | ||
Lymphangitis-associated rickettsiosis, a new rickettsiosis caused by Rickettsia sibirica mongolotimonae: seven new cases and review of the literature | Q36103617 | ||
Cultivating the uncultivated: a community genomics perspective | Q36206955 | ||
Comparative genomics of metabolic pathways in Mycobacterium species: gene duplication, gene decay and lateral gene transfer | Q36634364 | ||
Multi-targeting by monotherapeutic antibacterials. | Q36679193 | ||
Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax | Q28396307 | ||
Molecular basis of intrinsic macrolide resistance in the Mycobacterium tuberculosis complex | Q28487335 | ||
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth | Q29397612 | ||
Drugs for bad bugs: confronting the challenges of antibacterial discovery | Q29547723 | ||
Mechanisms of evolution in Rickettsia conorii and R. prowazekii | Q29615837 | ||
A diarylquinoline drug active on the ATP synthase of Mycobacterium tuberculosis | Q29617342 | ||
Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach | Q29617547 | ||
In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data | Q29618471 | ||
Comparative genomic analysis of Vibrio cholerae: genes that correlate with cholera endemic and pandemic disease. | Q30329522 | ||
Multispacer typing to study the genotypic distribution of Bartonella henselae populations. | Q30355366 | ||
Mixed-genome microarrays reveal multiple serotype and lineage-specific differences among strains of Listeria monocytogenes | Q30885683 | ||
Genome-directed isolation of the key nitrogen fixer Leptospirillum ferrodiazotrophum sp. nov. from an acidophilic microbial community | Q31009340 | ||
Evaluation and selection of tandem repeat loci for a Brucella MLVA typing assay | Q31032100 | ||
Genomic approach for analysis of surface proteins in Chlamydia pneumoniae | Q31032708 | ||
Genotyping of Mycobacterium leprae on the basis of the polymorphism of TTC repeats for analysis of leprosy transmission | Q31041634 | ||
Genome-wide DNA microarray analysis of Francisella tularensis strains demonstrates extensive genetic conservation within the species but identifies regions that are unique to the highly virulent F. tularensis subsp. tularensis | Q31148694 | ||
Protein interaction mapping on a functional shotgun sequence of Rickettsia sibirica | Q33197916 | ||
Genotyping of Bacillus anthracis strains based on automated capillary 25-loci multiple locus variable-number tandem repeats analysis | Q33239138 | ||
Identification of candidate antigen in Whipple's disease using a serological proteomic approach | Q33241007 | ||
Determining the antibiotic resistance potential of the indigenous oral microbiota of humans using a metagenomic approach | Q33241176 | ||
Molecular characterization of Coxiella burnetii isolates by infrequent restriction site-PCR and MLVA typing | Q33241195 | ||
Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens | Q33243561 | ||
A postgenomic approach to identification of Mycobacterium leprae-specific peptides as T-cell reagents | Q33592488 | ||
Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis | Q33603350 | ||
Multilocus variable-number tandem repeat typing of Mycobacterium ulcerans | Q33753358 | ||
Genome scale identification of Treponema pallidum antigens | Q33883316 | ||
Identification of vaccine candidates against serogroup B meningococcus by whole-genome sequencing. | Q33892877 | ||
Reverse vaccinology, a genome-based approach to vaccine development | Q33938845 | ||
Comparison of Real-Time, Quantitative PCR with Molecular Beacons to Nested PCR and Culture Methods for Detection ofMycobacterium aviumsubsp.paratuberculosisin Bovine Fecal Samples | Q33946481 | ||
From microbial genome sequence to applications | Q33949904 | ||
Genome-sequence-based fluorescent amplified-fragment length polymorphism analysis of Mycobacterium tuberculosis. | Q33966011 | ||
Fluorescent amplified-fragment length polymorphism genotyping of Neisseria meningitidis identifies clones associated with invasive disease | Q33970672 | ||
Multilocus sequence typing system for Campylobacter jejuni. | Q33970764 | ||
Francisella tularensis strain typing using multiple-locus, variable-number tandem repeat analysis | Q33973368 | ||
Use of a whole genome approach to identify vaccine molecules affording protection against Streptococcus pneumoniae infection | Q34006372 | ||
Detecting and genotyping Escherichia coli O157:H7 using multiplexed PCR and nucleic acid microarrays | Q74303433 | ||
Glycogen metabolism loss: a common marker of parasitic behaviour in bacteria? | Q74603775 | ||
Pathoadaptive mutations: gene loss and variation in bacterial pathogens | Q77830302 | ||
Mycobacterial virulence and specialized secretion: same story, different ending | Q79888530 | ||
Single-nucleotide polymorphism-based population genetic analysis of Mycobacterium tuberculosis strains from 4 geographic sites | Q81564110 | ||
Genomics of host-pathogen interactions. | Q36695101 | ||
Comparison of PCR and Serology Assays for Early Diagnosis of Acute Q Fever | Q37058956 | ||
Evolutionary genomics of Staphylococcus aureus: insights into the origin of methicillin-resistant strains and the toxic shock syndrome epidemic | Q37116927 | ||
Suicide PCR on skin biopsy specimens for diagnosis of rickettsioses | Q37156862 | ||
Rickettsia felis infection acquired in Europe and documented by polymerase chain reaction | Q37320046 | ||
Use of an oligonucleotide array for laboratory diagnosis of bacteria responsible for acute upper respiratory infections | Q37511441 | ||
Identification and characterization of bacterial pathogens causing bloodstream infections by DNA microarray | Q38311682 | ||
Detection of Neisseria Meningitidis in clinical samples by a duplex real-time PCR targeting the porA and ctrA genes | Q38342723 | ||
Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity. | Q38976676 | ||
Rickettsia africae, a tick-borne pathogen in travelers to sub-Saharan Africa | Q39384144 | ||
Fluorescent amplified-fragment length polymorphism subtyping of the Salmonella enterica serovar enteritidis phage type 4 clone complex | Q39462919 | ||
Development of a genomics-based PCR assay for detection of Mycoplasma pneumoniae in a large outbreak in New York State | Q39464101 | ||
Genome Sequence-Based Fluorescent Amplified Fragment Length Polymorphism of Campylobacter jejuni , Its Relationship to Serotyping, and Its Implications for Epidemiological Analysis | Q39466785 | ||
Mosaic genes and mosaic chromosomes: intra- and interspecies genomic variation of Streptococcus pneumoniae | Q39519447 | ||
Determining the genomic locations of repetitive DNA sequences with a whole-genome microarray: IS6110 in Mycobacterium tuberculosis | Q39664517 | ||
Genome-scale metabolic model of Helicobacter pylori 26695. | Q39679903 | ||
Whole-genome sequence variation among multiple isolates of Pseudomonas aeruginosa | Q39705951 | ||
Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays | Q39734864 | ||
Genome-scale design of PCR primers and long oligomers for DNA microarrays | Q39936117 | ||
Identification of two putative rickettsial adhesins by proteomic analysis | Q40337996 | ||
Use of genome selected repeated sequences increases the sensitivity of PCR detection of Tropheryma whipplei. | Q40470214 | ||
Multispacer typing technique for sequence-based typing of Bartonella quintana | Q40517737 | ||
Spotless rickettsiosis caused by Rickettsia slovaca and associated with Dermacentor ticks | Q40583400 | ||
Transcriptome-based antigen identification for Neisseria meningitidis | Q40676977 | ||
Previously unrecognized vaccine candidates against group B meningococcus identified by DNA microarrays | Q40711453 | ||
Assessment of the metabolic capabilities of Haemophilus influenzae Rd through a genome-scale pathway analysis | Q41724916 | ||
Computer-aided design of agents that inhibit the cep quorum-sensing system of Burkholderia cenocepacia | Q41813059 | ||
Multispacer typing of Rickettsia prowazekii enabling epidemiological studies of epidemic typhus | Q42537037 | ||
Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. | Q42645426 | ||
Insight into age-related macular degeneration: new vision in sight | Q43586539 | ||
Identification and molecular characterisation of CmeB, a Campylobacter jejuni multidrug efflux pump | Q43868806 | ||
Phylogeny of the Whipple's-disease-associated bacterium | Q43921100 | ||
Comparison of different decontamination methods for reagents to detect low concentrations of bacterial 16S DNA by real-time-PCR. | Q44227195 | ||
Genomics-based design of defined growth media for the plant pathogen Xylella fastidiosa | Q44320594 | ||
The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens. | Q44586499 | ||
Mycobacterial interspersed repetitive units (MIRU) differentiate Mycobacterium avium subspecies paratuberculosis from other species of the Mycobacterium avium complex | Q44759827 | ||
Development and evaluation of microarray-based whole-genome hybridization for detection of microorganisms within the context of environmental applications | Q45237418 | ||
Characterization and identification of vaccine candidate proteins through analysis of the group A Streptococcus surface proteome. | Q45284162 | ||
Estimation of prokaryote genomic DNA G+C content by sequencing universally conserved genes | Q45316351 | ||
Genomic diversity and evolution within the species Streptococcus agalactiae | Q46626837 | ||
Genome-based design of a cell-free culture medium for Tropheryma whipplei | Q51834797 | ||
Development of Rickettsia prowazekii DNA vaccine: cloning strategies | Q52609269 | ||
Identification and characterization of a phospholipase D-superfamily gene in rickettsiae. | Q54745787 | ||
Identification of vaccine candidate antigens from a genomic analysis of Porphyromonas gingivalis | Q57020069 | ||
Towards an immunodiagnostic test for leprosy | Q57937497 | ||
Review of false-positive cultures for Mycobacterium tuberculosis and recommendations for avoiding unnecessary treatment | Q34092324 | ||
Selection of protective epitopes for Brucella melitensis by DNA vaccination | Q34111670 | ||
Metabolic modeling of microbial strains in silico. | Q34179356 | ||
Genomics-based identification of targets in pathogenic bacteria for potential therapeutic and diagnostic use. | Q34179576 | ||
Multilocus sequence typing scheme for Enterococcus faecium. | Q34196794 | ||
Identification of novel Mycobacterium tuberculosis antigens with potential as diagnostic reagents or subunit vaccine candidates by comparative genomics. | Q34257884 | ||
Search for potential vaccine candidate open reading frames in the Bacillus anthracis virulence plasmid pXO1: in silico and in vitro screening | Q34262140 | ||
Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes | Q34297810 | ||
Identification of a universal Group B streptococcus vaccine by multiple genome screen | Q34313096 | ||
From genome to vaccine: in silico predictions, ex vivo verification. | Q34324993 | ||
Cultivating the uncultured | Q34388876 | ||
Genome scale comparison of Mycobacterium avium subsp. paratuberculosis with Mycobacterium avium subsp. avium reveals potential diagnostic sequences | Q34455967 | ||
Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms | Q34655405 | ||
Diagnosis of Bartonella endocarditis by a real-time nested PCR assay using serum | Q34773678 | ||
Molecular evaluation of antibiotic susceptibility: Tropheryma whipplei paradigm | Q34940257 | ||
Multilocus variable-number tandem repeat analysis distinguishes outbreak and sporadic Escherichia coli O157:H7 isolates | Q34950346 | ||
Strain typing of Borrelia burgdorferi, Borrelia afzelii, and Borrelia garinii by using multiple-locus variable-number tandem repeat analysis | Q34988507 | ||
Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua: clues for evolution and pathogenicity | Q35089471 | ||
P433 | issue | 11 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | infectious disease | Q18123741 |
P304 | page(s) | 711-723 | |
P577 | publication date | 2007-11-01 | |
P13046 | publication type of scholarly work | review article | Q7318358 |
P1433 | published in | Lancet Infectious Diseases | Q15724248 |
P1476 | title | Bacterial genome sequencing and its use in infectious diseases | |
P478 | volume | 7 |
Q115652024 | A System of Rapidly Detecting Escherichia Coli in Food Based on a Nanoprobe and Improved ATP Bioluminescence Technology |
Q35314574 | An evolutionary analysis of genome expansion and pathogenicity in Escherichia coli. |
Q33511665 | Analysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clustering |
Q33651702 | Analysis of intra-genomic GC content homogeneity within prokaryotes |
Q43844959 | Biosurveillance of emerging biothreats using scalable genotype clustering |
Q38320332 | Clinical detection and characterization of bacterial pathogens in the genomics era. |
Q91756082 | Coculture at the crossroads of the new microbiology techniques for the isolation of strict intracellular bacteria |
Q46307129 | Comparison of whole genome sequencing to restriction endonuclease analysis and gel diffusion precipitin-based serotyping of Pasteurella multocida |
Q30883196 | Current and past strategies for bacterial culture in clinical microbiology |
Q60039745 | Demography and the extinction of European Neanderthals |
Q87250835 | Detection of a novel Lyme borreliosis pathogen |
Q34459940 | Evidence for Elizabethkingia anophelis transmission from mother to infant, Hong Kong |
Q30940688 | Examination of genome homogeneity in prokaryotes using genomic signatures |
Q34268144 | Exploration of multivariate analysis in microbial coding sequence modeling |
Q24655140 | Genome sequencing of linezolid-resistant Streptococcus pneumoniae mutants reveals novel mechanisms of resistance |
Q37857571 | Genome-wide association studies and susceptibility to infectious diseases |
Q37069059 | Genomic analysis of an emerging multiresistant Staphylococcus aureus strain rapidly spreading in cystic fibrosis patients revealed the presence of an antibiotic inducible bacteriophage |
Q38160631 | Genomics and metagenomics in medical microbiology |
Q46093840 | Genomics of medical importance |
Q37259648 | Infectious disease in the genomic era. |
Q99237950 | Insights Into Subspecies Discrimination Potentiality From Bacteria MALDI-TOF Mass Spectra by Using Data Mining and Diversity Studies |
Q96613478 | Interest of bacterial pangenome analyses in clinical microbiology |
Q37897209 | Investigating pathogen biology at the level of the proteome |
Q38086337 | Investigation of antibiotic resistance in the genomic era of multidrug-resistant Gram-negative bacilli, especially Enterobacteriaceae, Pseudomonas and Acinetobacter |
Q56773193 | Leptospiral nephropathy |
Q44799617 | Linking questions to practices in the study of microbial pathogens: sampling bias and typing methods. |
Q36830873 | Microbial Variome Database: Point Mutations, Adaptive or Not, in Bacterial Core Genomes |
Q29616597 | Microbial culturomics: paradigm shift in the human gut microbiome study |
Q34982856 | Modern clinical microbiology: new challenges and solutions |
Q37590025 | Molecular aspects of Moraxella catarrhalis pathogenesis |
Q37985256 | Molecular methods for pathogen and microbial community detection and characterization: Current and potential application in diagnostic microbiology |
Q64064650 | Molecular typing of cytotoxin-producing Klebsiella oxytoca isolates by 16S-23S internal transcribed spacer PCR |
Q40062724 | New Laboratory Tools for Emerging Bacterial Challenges |
Q33815216 | New detection systems of bacteria using highly selective media designed by SMART: selective medium-design algorithm restricted by two constraints |
Q33390473 | Overcoming function annotation errors in the Gram-positive pathogen Streptococcus suis by a proteomics-driven approach |
Q41430155 | Prediction of protein-protein interactions between human host and a pathogen and its application to three pathogenic bacteria |
Q37884605 | Prospects for the Future Using Genomics and Proteomics in Clinical Microbiology |
Q38159112 | Proteome studies of bacterial antibiotic resistance mechanisms |
Q38100300 | Rapid bacterial genome sequencing: methods and applications in clinical microbiology |
Q43170287 | Rapid comparative genomic analysis for clinical microbiology: the Francisella tularensis paradigm |
Q40672269 | Real time application of whole genome sequencing for outbreak investigation - What is an achievable turnaround time? |
Q37036211 | Real-time genomic epidemiological evaluation of human Campylobacter isolates by use of whole-genome multilocus sequence typing |
Q34156218 | Relative entropy differences in bacterial chromosomes, plasmids, phages and genomic islands |
Q40457931 | Respiratory Tularemia: Francisella Tularensis and Microarray Probe Designing. |
Q37699468 | Review of microarray studies for host-intracellular pathogen interactions |
Q28728617 | Routine use of microbial whole genome sequencing in diagnostic and public health microbiology |
Q34097635 | SNP/RD typing of Mycobacterium tuberculosis Beijing strains reveals local and worldwide disseminated clonal complexes |
Q43868982 | Small Indian mongooses and masked palm civets serve as new reservoirs of Bartonella henselae and potential sources of infection for humans |
Q29616595 | The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota |
Q48045288 | The rhizome of the multidrug-resistant Enterobacter aerogenes genome reveals how new "killer bugs" are created because of a sympatric lifestyle |
Q28662038 | Update on tick-borne rickettsioses around the world: a geographic approach |
Q63762106 | Using WGS to identify antibiotic resistance genes and predict antimicrobial resistance phenotypes in MDR Acinetobacter baumannii in Tanzania |
Q31109331 | Utility of algorithms for the analysis of integrated Salmonella surveillance data |
Q89606567 | Vaccinomics to design a novel single chimeric subunit vaccine for broad-spectrum immunological applications targeting nosocomial Enterobacteriaceae pathogens |
Q38185756 | Whole genome sequencing of bacteria in cystic fibrosis as a model for bacterial genome adaptation and evolution |
Q26799059 | Whole-genome sequencing targets drug-resistant bacterial infections |
Q40305572 | Widespread use of real-time PCR for rickettsial diagnosis |
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