scholarly article | Q13442814 |
P50 | author | Frederic D. Bushman | Q37377271 |
Scott T Kelley | Q57742056 | ||
Michael C. Mozer | Q73160909 | ||
Justin Kuczynski | Q110875140 | ||
Dan Knights | Q110875186 | ||
Rob Knight | Q20657126 | ||
P2093 | author name string | Ronald G Collman | |
Jesse Zaneveld | |||
Emily S Charlson | |||
P2860 | cites work | Microbial source tracking: state of the science | Q35042595 |
The influence of sex, handedness, and washing on the diversity of hand surface bacteria | Q36976749 | ||
Alternative estimate of source distribution in microbial source tracking using posterior probabilities | Q48824881 | ||
Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests | Q22673963 | ||
QIIME allows analysis of high-throughput community sequencing data | Q24616873 | ||
Finding scientific topics | Q24626657 | ||
Search and clustering orders of magnitude faster than BLAST | Q29547431 | ||
Bacterial community variation in human body habitats across space and time | Q29547432 | ||
UniFrac: a new phylogenetic method for comparing microbial communities | Q29547435 | ||
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy | Q29547619 | ||
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons | Q29614292 | ||
FastTree: computing large minimum evolution trees with profiles instead of a distance matrix | Q29614577 | ||
Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale | Q29617333 | ||
Specific ribosomal DNA sequences from diverse environmental settings correlate with experimental contaminants | Q32047548 | ||
PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample. | Q33228737 | ||
Accurate determination of microbial diversity from 454 pyrosequencing data | Q33492259 | ||
Novel application of a statistical technique, Random Forests, in a bacterial source tracking study | Q33611609 | ||
Characterization of coastal urban watershed bacterial communities leads to alternative community-based indicators | Q33619311 | ||
Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags | Q33645951 | ||
Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions | Q34156500 | ||
P433 | issue | 9 | |
P304 | page(s) | 761-763 | |
P577 | publication date | 2011-07-17 | |
P1433 | published in | Nature Methods | Q680640 |
P1476 | title | Bayesian community-wide culture-independent microbial source tracking | |
P478 | volume | 8 |
Q45942894 | A Dirichlet-Multinomial Bayes Classifier for Disease Diagnosis with Microbial Compositions. |
Q88305960 | A Method for Targeted 16S Sequencing of Human Milk Samples |
Q64105962 | A Preliminary Study of Microbiota Diversity in Saliva and Bronchoalveolar Lavage Fluid from Patients with Primary Bronchogenic Carcinoma |
Q36359875 | A Robust Framework for Microbial Archaeology |
Q37679757 | A brave new world: the lung microbiota in an era of change |
Q46349678 | A communal catalogue reveals Earth's multiscale microbial diversity |
Q52585068 | A comparison of methods used to unveil the genetic and metabolic pool in the built environment. |
Q90859952 | A horizon scan of priorities for coastal marine microbiome research |
Q33856354 | A microbial signature approach to identify fecal pollution in the waters off an urbanized coast of Lake Michigan |
Q39817539 | A multiplayer game: species of Clostridium, Acinetobacter, and Pseudomonas are responsible for the persistence of antibiotic resistance genes in manure-treated soils. |
Q26851665 | A new era in palaeomicrobiology: prospects for ancient dental calculus as a long-term record of the human oral microbiome |
Q26771658 | A new perspective on microbial landscapes within food production |
Q35447347 | A review of software for analyzing molecular sequences |
Q57818277 | Accounting for Bacterial Overlap Between Raw Water Communities and Contaminating Sources Improves the Accuracy of Signature-Based Microbial Source Tracking |
Q26998064 | Advancing analytical algorithms and pipelines for billions of microbial sequences |
Q34995691 | Advancing our understanding of the human microbiome using QIIME |
Q34987396 | Advection shapes Southern Ocean microbial assemblages independent of distance and environment effects |
Q38647023 | Airborne bacterial assemblage in a zero carbon building: a case study |
Q89559501 | Airborne microbial biodiversity and seasonality in Northern and Southern Sweden |
Q47105097 | Alterations in oral bacterial communities are associated with risk factors for oral and oropharyngeal cancer |
Q96685651 | Alterations of gut microbiota contribute to the progression of unruptured intracranial aneurysms |
Q36190930 | Amplicon-based profiling of bacteria in raw and secondary treated wastewater from treatment plants across Australia. |
Q90189684 | An Integrated Multi-Disciplinary Perspectivefor Addressing Challenges of the Human Gut Microbiome |
Q47849839 | An Introductory "How-to" Guide for Incorporating Microbiome Research into Integrative and Comparative Biology. |
Q38985902 | An introduction to microbiome analysis for human biology applications |
Q27005869 | Ancient and modern environmental DNA |
Q37736241 | Antibiotic treatment at delivery shapes the initial oral microbiome in neonates |
Q28829366 | Antimicrobial Chemicals Are Associated with Elevated Antibiotic Resistance Genes in the Indoor Dust Microbiome |
Q57603397 | Application of metagenomics to assess microbial communities in water and other environmental matrices |
Q102217145 | Aquifer recharge viewed through the lens of microbial community ecology: Initial disturbance response, and impacts of species sorting versus mass effects on microbial community assembly in groundwater during riverbank filtration |
Q90089510 | Artificial-turf surfaces for sport and recreational activities: microbiota analysis and 16S sequencing signature of synthetic vs natural soccer fields |
Q57213492 | Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf |
Q34412019 | Assessing bacterial populations in the lung by replicate analysis of samples from the upper and lower respiratory tracts |
Q92749302 | Assessing the impact of source water on tap water bacterial communities in 46 drinking water supply systems in China |
Q40217575 | Association Between Breast Milk Bacterial Communities and Establishment and Development of the Infant Gut Microbiome. |
Q35552277 | Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease |
Q35782057 | Athletic equipment microbiota are shaped by interactions with human skin |
Q34324792 | Bacteria from diverse habitats colonize and compete in the mouse gut. |
Q64269069 | Bacterial Community 16S rRNA Gene Sequencing Characterizes Riverine Microbial Impact on Lake Michigan |
Q34557144 | Bacterial colonization and succession in a newly opened hospital. |
Q33898401 | Bacterial communities found in placental tissues are associated with severe chorioamnionitis and adverse birth outcomes |
Q91893438 | Bacterial community analysis of floor dust and HEPA filters in air purifiers used in office rooms in ILAS, Beijing |
Q34305189 | Bacterial community structure is indicative of chemical inputs in the Upper Mississippi River |
Q33751674 | Bacterial community structure transformed after thermophilically composting human waste in Haiti. |
Q40092017 | Bacterial diversity among four healthcare-associated institutes in Taiwan. |
Q34571294 | Bacterial diversity in two Neonatal Intensive Care Units (NICUs). |
Q31016325 | Bacterial responses to environmental change on the Tibetan Plateau over the past half century |
Q92525232 | Benchmarking Metagenomics Tools for Taxonomic Classification |
Q60547176 | Best practices for analysing microbiomes |
Q35177266 | BioMiCo: a supervised Bayesian model for inference of microbial community structure. |
Q35433167 | Biodiversity hot spot on a hot spot: novel extremophile diversity in Hawaiian fumaroles |
Q35585807 | Biogeography of Planktonic and Benthic Archaeal Communities in a Subtropical Eutrophic Estuary of China |
Q58112596 | Bioinformatics Aspects of Foodborne Pathogen Research |
Q34549449 | BiomeNet: a Bayesian model for inference of metabolic divergence among microbial communities |
Q64081356 | Black soldier fly larvae (Hermetia illucens) strengthen the metabolic function of food waste biodegradation by gut microbiome |
Q92602908 | Bogotá River anthropogenic contamination alters microbial communities and promotes spread of antibiotic resistance genes |
Q35746850 | Buccal swabbing as a noninvasive method to determine bacterial, archaeal, and eukaryotic microbial community structures in the rumen. |
Q45842596 | Canopy soil bacterial communities altered by severing host tree limbs |
Q58683496 | Carbon Bioavailability in a High Arctic Fjord Influenced by Glacial Meltwater, NE Greenland |
Q52664920 | Cecal Versus Fecal Microbiota in Ossabaw Swine and Implications for Obesity. |
Q41738576 | Changes in bacterial and eukaryotic communities during sewage decomposition in Mississippi river water |
Q33691783 | Changes in microbial ecology after fecal microbiota transplantation for recurrent C. difficile infection affected by underlying inflammatory bowel disease |
Q35967119 | Changes in the Eye Microbiota Associated with Contact Lens Wearing |
Q35355353 | Changes in the bacterial microbiota in gut, blood, and lungs following acute LPS instillation into mice lungs |
Q89655890 | Changes in the community structure of the symbiotic microbes of wild amphibians from the eastern edge of the Tibetan Plateau |
Q92124000 | Characteristics and formation mechanism of intestinal bacteria particles emitted from aerated wastewater treatment tanks |
Q64072261 | Characterization of microbial communities in the chicken oviduct and the origin of chicken embryo gut microbiota |
Q36286739 | Characterization of the salivary microbiome in patients with pancreatic cancer |
Q63070990 | Characterization of the total and viable bacterial and fungal communities associated with the International Space Station surfaces |
Q48044851 | Characterizing the bacterial communities in retail stores in the United States |
Q42242722 | City-scale distribution and dispersal routes of mycobiome in residences. |
Q55438788 | Clean Low-Biomass Procedures and Their Application to Ancient Ice Core Microorganisms. |
Q31115660 | Cohabiting family members share microbiota with one another and with their dogs |
Q113458402 | Combined methodologies for gaining much information from ancient dental calculus: testing experimental strategies for simultaneously analysing DNA and food residues |
Q28744365 | Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation |
Q64986067 | Commensal and Pathogenic Members of the Dental Calculus Microbiome of Badia Pozzeveri Individuals from the 11th to 19th Centuries. |
Q38914938 | Community dynamics drive punctuated engraftment of the fecal microbiome following transplantation using freeze-dried, encapsulated fecal microbiota. |
Q57471994 | Community profiling of the urinary microbiota: considerations for low-biomass samples |
Q34597515 | Comparison of the microbial community structures of untreated wastewaters from different geographic locales |
Q37530430 | Complete Microbiota Engraftment Is Not Essential for Recovery from Recurrent Clostridium difficile Infection following Fecal Microbiota Transplantation |
Q92695326 | Complexities in understanding antimicrobial resistance across domesticated animal, human, and environmental systems |
Q92729123 | Compositional and temporal stability of fecal taxon libraries for use with SourceTracker in sub-tropical catchments |
Q26825114 | Computational meta'omics for microbial community studies |
Q37002469 | Contribution of Vegetation to the Microbial Composition of Nearby Outdoor Air |
Q38841050 | Contribution of different bacterial dispersal sources to lakes: Population and community effects in different seasons |
Q33767585 | Contributions of the maternal oral and gut microbiome to placental microbial colonization in overweight and obese pregnant women |
Q64937949 | Controlling for Contaminants in Low-Biomass 16S rRNA Gene Sequencing Experiments. |
Q35015637 | Convergence of gut microbiomes in myrmecophagous mammals |
Q52682437 | Creating a 3D microbial and chemical snapshot of a human habitat. |
Q52596479 | Current understanding of the human microbiome. |
Q58599683 | Daylight exposure modulates bacterial communities associated with household dust |
Q30592069 | DeconRNASeq: a statistical framework for deconvolution of heterogeneous tissue samples based on mRNA-Seq data |
Q35997515 | Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR |
Q45943740 | Detecting macroecological patterns in bacterial communities across independent studies of global soils. |
Q91644067 | Dietary supplementation with strawberry induces marked changes in the composition and functional potential of the gut microbiome in diabetic mice |
Q33622045 | Differential Impacts of Land-Based Sources of Pollution on the Microbiota of Southeast Florida Coral Reefs |
Q55457325 | Differential preservation of endogenous human and microbial DNA in dental calculus and dentin. |
Q28732242 | Dirichlet multinomial mixtures: generative models for microbial metagenomics |
Q34633165 | Discovering new indicators of fecal pollution |
Q57263172 | Disruption of maternal gut microbiota during gestation alters offspring microbiota and immunity |
Q33647179 | Diversity is the question, not the answer |
Q34773296 | Diversity of bacterial communities of fitness center surfaces in a U.S. metropolitan area. |
Q36198721 | Diversity, abundance, and possible sources of fecal bacteria in the Yangtze River. |
Q34484675 | Diversity, distribution and sources of bacteria in residential kitchens |
Q102053759 | Diversity, function and assembly of mangrove root-associated microbial communities at a continuous fine-scale |
Q62646622 | Does the human placenta delivered at term have a microbiota? Results of cultivation, quantitative real-time PCR, 16S rRNA gene sequencing, and metagenomics |
Q92133701 | Durable Long-Term Bacterial Engraftment following Encapsulated Fecal Microbiota Transplantation To Treat Clostridium difficile Infection |
Q64115348 | Dysbiosis patterns during re-induction/salvage versus induction chemotherapy for acute leukemia |
Q55024978 | Early-life skin microbiota in hospitalized preterm and full-term infants. |
Q34777579 | Ecological succession and viability of human-associated microbiota on restroom surfaces. |
Q57793286 | Ecologically informed microbial biomarkers and accurate classification of mixed and unmixed samples in an extensive cross-study of human body sites |
Q33663195 | Endosymbiont interference and microbial diversity of the Pacific coast tick, Dermacentor occidentalis, in San Diego County, California |
Q114867942 | Enhancing untargeted metabolomics using metadata-based source annotation |
Q60046436 | Enriching Beneficial Microbial Diversity of Indoor Plants and Their Surrounding Built Environment With Biostimulants |
Q38578579 | Enrichment of lung microbiome with supraglottic taxa is associated with increased pulmonary inflammation |
Q37229478 | Enrichment of the lung microbiome with oral taxa is associated with lung inflammation of a Th17 phenotype. |
Q90101478 | Enterococcal Concentrations in a Coastal Ecosystem Are a Function of Fecal Source Input, Environmental Conditions, and Environmental Sources |
Q48194059 | Environmental Microbiota Drives Microbial Succession and Metabolic Profiles during Chinese Liquor Fermentation |
Q89520334 | Environmental influences on and antimicrobial activity of the skin microbiota of Proceratophrys boiei (Amphibia, Anura) across forest fragments |
Q90438417 | Environmental remodeling of human gut microbiota and antibiotic resistome in livestock farms |
Q46129578 | Evaluation of molecular community analysis methods for discerning fecal sources and human waste |
Q36273126 | Evolutionary Patterns and Processes: Lessons from Ancient DNA. |
Q38953346 | Experimental metagenomics and ribosomal profiling of the human skin microbiome |
Q34072406 | Exploring neighborhoods in the metagenome universe |
Q91879077 | Exploring thematic structure and predicted functionality of 16S rRNA amplicon data |
Q37223239 | Extreme Dysbiosis of the Microbiome in Critical Illness |
Q92643433 | FEAST: fast expectation-maximization for microbial source tracking |
Q90407884 | FORENSIC: an Online Platform for Fecal Source Identification |
Q98726065 | Faecal microbiota transplantation for Clostridioides difficile: mechanisms and pharmacology |
Q64905175 | Fecal microbiota dysbiosis in macaques and humans within a shared environment. |
Q52691475 | Fecal microbiota transplantation reverses antibiotic and chemotherapy-induced gut dysbiosis in mice. |
Q89514324 | Fecal microbiota transplantation to maintain remission in Crohn's disease: a pilot randomized controlled study |
Q58599678 | Fecal source identification using random forest |
Q92777688 | Feeding modes shape the acquisition and structure of the initial gut microbiota in newborn lambs |
Q93073808 | Fetal exposure to the maternal microbiota in humans and mice |
Q35595195 | Forensic analysis of the microbiome of phones and shoes |
Q28821682 | From Sample to Multi-Omics Conclusions in under 48 Hours |
Q39434763 | Fungal community composition in soils subjected to long-term chemical fertilization is most influenced by the type of organic matter |
Q37349213 | Geography and Location Are the Primary Drivers of Office Microbiome Composition |
Q90494597 | Global Comparison of the Bacterial Communities of Bilge Water, Boat Surfaces, and External Port Water |
Q92000751 | Global diversity and biogeography of bacterial communities in wastewater treatment plants |
Q38836160 | Global-Scale Structure of the Eelgrass Microbiome |
Q46266845 | Gut Microbiome and Putative Resistome of Inca and Italian Nobility Mummies |
Q28548686 | Gut Microbiome of an 11th Century A.D. Pre-Columbian Andean Mummy |
Q35935211 | Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children |
Q46457802 | Gut microbial ecology of lizards: insights into diversity in the wild, effects of captivity, variation across gut regions and transmission. |
Q36049267 | Gut microbiota are linked to increased susceptibility to hepatic steatosis in low-aerobic-capacity rats fed an acute high-fat diet |
Q37483768 | Gut microbiota from metabolic disease-resistant, macrophage-specific RIP140 knockdown mice improves metabolic phenotype and gastrointestinal integrity |
Q29614796 | Gut microbiota from twins discordant for obesity modulate metabolism in mice |
Q40090428 | Gut microbiota of a long-distance migrant demonstrates resistance against environmental microbe incursions. |
Q41035435 | Habitat and indigenous gut microbes contribute to the plasticity of gut microbiome in oriental river prawn during rapid environmental change |
Q47642289 | High-fat, high-fructose, high-cholesterol feeding causes severe NASH and cecal microbiota dysbiosis in juvenile Ossabaw swine. |
Q62516661 | Host‐derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin |
Q34054045 | Human-associated microbial signatures: examining their predictive value |
Q55192831 | Identification and Removal of Contaminant Sequences From Ribosomal Gene Databases: Lessons From the Census of Deep Life. |
Q40124151 | Impact of environmental microbiota on human microbiota of workers in academic mouse research facilities: An observational study |
Q40441985 | Impacts of Seasonal Housing and Teat Preparation on Raw Milk Microbiota: a High-Throughput Sequencing Study |
Q90575798 | Implications of indoor microbial ecology and evolution on antibiotic resistance |
Q33771711 | Improved detection of gene-microbe interactions in the mouse skin microbiota using high-resolution QTL mapping of 16S rRNA transcripts |
Q92177234 | Improving the identification of the source of faecal pollution in water using a modelling approach: From multi-source to aged and diluted samples |
Q49840078 | Individual and household attributes influence the dynamics of the personal skin microbiota and its association network. |
Q41000253 | Indoor air bacterial communities in Hong Kong households assemble independently of occupant skin microbiomes. |
Q62736960 | Indoor air microbiota of pig farms drives the composition of the pig farmer's nasal microbiota in a season dependent and farm specific manner |
Q34436016 | Indoor-air microbiome in an urban subway network: diversity and dynamics |
Q36847284 | Infant gut microbiota and the hygiene hypothesis of allergic disease: impact of household pets and siblings on microbiota composition and diversity. |
Q28087766 | Infectious disease transmission and contact networks in wildlife and livestock |
Q92668236 | Influences of Ingredients and Bakers on the Bacteria and Fungi in Sourdough Starters and Bread |
Q34516183 | Insights from characterizing extinct human gut microbiomes |
Q42289671 | Insights of the dental calculi microbiome of pre-Columbian inhabitants from Puerto Rico |
Q34526278 | Interconnected microbiomes and resistomes in low-income human habitats |
Q64079854 | Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems |
Q31076803 | International interlaboratory study comparing single organism 16S rRNA gene sequencing data: Beyond consensus sequence comparisons |
Q39963728 | Into the deep: Evaluation of SourceTracker for assessment of faecal contamination of coastal waters. |
Q28607510 | Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification |
Q92469355 | Laboratory contamination over time during low-biomass sample analysis |
Q55312041 | Latent environment allocation of microbial community data. |
Q38599409 | Learning Microbial Community Structures with Supervised and Unsupervised Non-negative Matrix Factorization |
Q46244285 | Linking bacterial community structure to advection and environmental impact along a coast-fjord gradient of the Sognefjord, western Norway |
Q43366024 | Linking the Gut Microbial Ecosystem with the Environment: Does Gut Health Depend on Where We Live? |
Q57168732 | Links between environment, diet, and the hunter-gatherer microbiome |
Q38639765 | Long-range transport of airborne microbes over the global tropical and subtropical ocean |
Q34435848 | Longitudinal analysis of microbial interaction between humans and the indoor environment |
Q63976596 | Longitudinal homogenization of the microbiome between both occupants and the built environment in a cohort of United States Air Force Cadets |
Q33833225 | Lung Microbiota and Its Impact on the Mucosal Immune Phenotype. |
Q38693543 | Major phylum-level differences between porefluid and host rock bacterial communities in the terrestrial deep subsurface |
Q35156682 | Mapping microbial ecosystems and spoilage-gene flow in breweries highlights patterns of contamination and resistance |
Q38812357 | Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats. |
Q37635172 | Maternal HIV infection influences the microbiome of HIV-uninfected infants |
Q58602512 | Maternal High-Fat Diet Programs Offspring Liver Steatosis in a Sexually Dimorphic Manner in Association with Changes in Gut Microbial Ecology in Mice |
Q92091375 | Maternal milk and fecal microbes guide the spatiotemporal development of mucosa-associated microbiota and barrier function in the porcine neonatal gut |
Q37693667 | Maturation of the infant microbiome community structure and function across multiple body sites and in relation to mode of delivery |
Q39449918 | Metagenome-based surveillance and diagnostic approaches to studying the microbial ecology of food production and processing environments. |
Q92229070 | Metagenomic analysis of dental calculus in ancient Egyptian baboons |
Q35355041 | Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants. |
Q28595670 | Microbial Community Patterns Associated with Automated Teller Machine Keypads in New York City |
Q33599792 | Microbial Community Response on Wastewater Discharge in Boreal Lake Sediments |
Q92617569 | Microbial Exposure Enhances Immunity to Pathogens Recognized by TLR2 but Increases Susceptibility to Cytokine Storm through TLR4 Sensitization |
Q34088169 | Microbial biogeography of public restroom surfaces |
Q57091475 | Microbial connectivity and sorting in a High Arctic watershed |
Q91673905 | Microbial differences between dental plaque and historic dental calculus are related to oral biofilm maturation stage |
Q46298670 | Microbial diversity in an intensively managed landscape is structured by landscape connectivity |
Q90710534 | Microbial residents of the Atlantis Massif's shallow serpentinite subsurface |
Q38377553 | Microbial source tracking in impaired watersheds using PhyloChip and machine-learning classification |
Q57155462 | Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians |
Q90665292 | Microbiome analyses of blood and tissues suggest cancer diagnostic approach |
Q92686610 | Microbiome applications for pathology: challenges of low microbial biomass samples during diagnostic testing |
Q87790546 | Microbiome assembly of avian eggshells and their potential as transgenerational carriers of maternal microbiota |
Q94563497 | Microbiome profile associated with malignant pleural effusion |
Q36069076 | Microbiome-wide association studies link dynamic microbial consortia to disease |
Q39021545 | Microbiota fingerprints lose individually identifying features over time. |
Q35803878 | Microbiota of the indoor environment: a meta-analysis |
Q115463763 | Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments |
Q39297788 | Multiple approaches to microbial source tracking in tropical northern Australia |
Q49838384 | Multiple colonist pools shape fiddler crab-associated bacterial communities |
Q38908458 | Multiple lines of evidence to identify sewage as the cause of water quality impairment in an urbanized tropical watershed. |
Q93179711 | Natural diets promote retention of the native gut microbiota in captive rodents |
Q41126180 | Natural mummification of the human gut preserves bacteriophage DNA. |
Q89723378 | Network analysis infers the wilt pathogen invasion associated with non-detrimental bacteria |
Q27009313 | New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches |
Q46375117 | Not just browsing: an animal that grazes phyllosphere microbes facilitates community heterogeneity. |
Q34494636 | Ocean currents shape the microbiome of Arctic marine sediments |
Q29994526 | Optimizing methods and dodging pitfalls in microbiome research |
Q64063373 | Oral bacteria colonize and compete with gut microbiota in gnotobiotic mice |
Q89149012 | PERFect: PERmutation Filtering test for microbiome data |
Q37277207 | Paneth cell defects in Crohn's disease patients promote dysbiosis |
Q34511597 | Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer |
Q28660564 | Pathogens and host immunity in the ancient human oral cavity |
Q33944190 | Pediatric Crohn disease patients exhibit specific ileal transcriptome and microbiome signature |
Q35799728 | Phylogenetic approaches to microbial community classification |
Q35106069 | Polyphasic analysis of a middle ages coprolite microbiota, Belgium |
Q40045156 | Potential role of intratumor bacteria in mediating tumor resistance to the chemotherapeutic drug gemcitabine |
Q57603334 | Predicting recurrence of Clostridium difficile infection following encapsulated fecal microbiota transplantation |
Q49859104 | Prevalence and Source of Fecal and Oral Bacteria on Infant, Child, and Adult Hands |
Q34566765 | Prolonged use of a proton pump inhibitor reduces microbial diversity: implications for Clostridium difficile susceptibility |
Q93339281 | QIIME 2 Enables Comprehensive End-to-End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data |
Q93024072 | Quantifying and Understanding Well-to-Well Contamination in Microbiome Research |
Q57104783 | Quantifying the Relative Contributions of Environmental Sources to the Microbial Community in an Urban Stream under Dry and Wet Weather Conditions |
Q40340982 | Rapid assemblage of diverse environmental fungal communities on public restroom floors |
Q21146690 | Reagent and laboratory contamination can critically impact sequence-based microbiome analyses |
Q35865216 | Relative and contextual contribution of different sources to the composition and abundance of indoor air bacteria in residences |
Q47280317 | Resolution of habitat-associated ecogenomic signatures in bacteriophage genomes and application to microbial source tracking. |
Q37122169 | Restructuring of the Aquatic Bacterial Community by Hydric Dynamics Associated with Superstorm Sandy |
Q92565316 | Revealing Cues for Fungal Interplay in the Plant-Air Interface in Vineyards |
Q92404384 | Seasonal Changes of Airborne Bacterial Communities Over Tokyo and Influence of Local Meteorology |
Q55485799 | Sediment Microbial Communities Influenced by Cool Hydrothermal Fluid Migration. |
Q35924484 | Sediments and Soils Act as Reservoirs for Taxonomic and Functional Bacterial Diversity in the Upper Mississippi River |
Q93161105 | Selective colonization ability of human fecal microbes in different mouse gut environments |
Q36995695 | Separating Putative Pathogens from Background Contamination with Principal Orthogonal Decomposition: Evidence for Leptospira in the Ugandan Neonatal Septisome |
Q90179417 | Sequence-Based Characterization of Intratumoral Bacteria-A Guide to Best Practice |
Q90630019 | Sex Bias in Gut Microbiome Transmission in Newly Paired Marmosets (Callithrix jacchus) |
Q64257471 | Sex-Specific Changes in Gut Microbiome Composition following Blueberry Consumption in C57BL/6J Mice |
Q96305494 | Shared bacterial communities between soil, stored drinking water, and hands in rural Bangladeshi households |
Q28603423 | Shifts in diversity and function of lake bacterial communities upon glacier retreat |
Q34584677 | Short-read assembly of full-length 16S amplicons reveals bacterial diversity in subsurface sediments |
Q60044487 | Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data |
Q104473912 | Simultaneous allergic traits in dogs and their owners are associated with living environment, lifestyle and microbial exposures |
Q33709446 | Skin microbiome imbalance in patients with STAT1/STAT3 defects impairs innate host defense responses |
Q38782323 | Soil DNA metabarcoding and high-throughput sequencing as a forensic tool: considerations, potential limitations and recommendations |
Q64263821 | Source Environments of the Microbiome in Perennially Ice-Covered Lake Untersee, Antarctica |
Q90415836 | Source identification of antibiotic resistance genes in a peri-urban river using novel crAssphage marker genes and metagenomic signatures |
Q100759099 | Source tracking of antibiotic resistance genes in the environment - Challenges, progress, and prospects |
Q40425514 | Source tracking using microbial community fingerprints: Method comparison with hydrodynamic modelling. |
Q113307799 | Sourcepredict: Prediction of metagenomic sample sources using dimension reduction followed by machine learning classification |
Q28397267 | Sources of airborne microorganisms in the built environment |
Q50948793 | Soy compared with milk protein in a Western diet changes fecal microbiota and decreases hepatic steatosis in obese OLETF rats. |
Q35867245 | Spatial Homogeneity of Bacterial Communities Associated with the Surface Mucus Layer of the Reef-Building Coral Acropora palmata |
Q91799901 | Spatial ecology of a wastewater network defines the antibiotic resistance genes in downstream receiving waters |
Q41195942 | Stable engraftment of human microbiota into mice with a single oral gavage following antibiotic conditioning. |
Q96022924 | Station and train surface microbiomes of Mexico City's metro (subway/underground) |
Q57210512 | Stationary and portable sequencing-based approaches for tracing wastewater contamination in urban stormwater systems |
Q64889124 | Strong Multivariate Relations Exist Among Milk, Oral, and Fecal Microbiomes in Mother-Infant Dyads During the First Six Months Postpartum. |
Q30392209 | Studying the microbiology of the indoor environment |
Q35275819 | Subsistence strategies in traditional societies distinguish gut microbiomes |
Q40333936 | Successful Resolution of Recurrent Clostridium difficile Infection using Freeze-Dried, Encapsulated Fecal Microbiota; Pragmatic Cohort Study |
Q90800513 | Surf zone microbiological water quality following emergency beach nourishment using sediments from a catastrophic debris flow |
Q91801572 | Systematic processing of ribosomal RNA gene amplicon sequencing data |
Q37720915 | Temporal dynamics of the gut microbiota in people sharing a confined environment, a 520-day ground-based space simulation, MARS500 |
Q35134178 | Temporal stability of the microbial community in sewage-polluted seawater exposed to natural sunlight cycles and marine microbiota |
Q98158320 | The Behavior of Amphibians Shapes Their Symbiotic Microbiomes |
Q92494862 | The Biodiversity and Geochemistry of Cryoconite Holes in Queen Maud Land, East Antarctica |
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