scholarly article | Q13442814 |
review article | Q7318358 |
P356 | DOI | 10.1016/J.SBI.2009.01.004 |
P8608 | Fatcat ID | release_xmmqch6rmfbudnsvofjsg7pgwe |
P932 | PMC publication ID | 2673466 |
P698 | PubMed publication ID | 19208466 |
P5875 | ResearchGate publication ID | 23998883 |
P50 | author | Eran Segal | Q5384865 |
P2093 | author name string | Jonathan Widom | |
P2860 | cites work | DNA bending by an adenine-thymine tract and its role in gene regulation | Q27633005 |
Structural origins of adenine-tract bending | Q27640492 | ||
DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum | Q27643016 | ||
The structure of an oligo(dA).oligo(dT) tract and its biological implications | Q27728751 | ||
A DNA dodecamer containing an adenine tract crystallizes in a unique lattice and exhibits a new bend | Q27732186 | ||
Chromatin remodelling at promoters suppresses antisense transcription | Q27932684 | ||
Different roles for abf1p and a T-rich promoter element in nucleosome organization of the yeast RPS28A gene | Q27938874 | ||
A DNA binding protein that recognizes oligo(dA).oligo(dT) tracts | Q27939932 | ||
DNA sequence-dependent deformability deduced from protein-DNA crystal complexes | Q29616629 | ||
Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome | Q29618064 | ||
Localization of ammonium ions in the minor groove of DNA duplexes in solution and the origin of DNA A-tract bending | Q30558409 | ||
NMR observation of individual molecules of hydration water bound to DNA duplexes: direct evidence for a spine of hydration water present in aqueous solution | Q30894628 | ||
Distinct modes of regulation by chromatin encoded through nucleosome positioning signals | Q33383211 | ||
Poly(dA.dT) sequences exist as rigid DNA structures in nucleosome-free yeast promoters in vivo | Q33825895 | ||
Activation of yeast RNA polymerase II transcription by a thymidine-rich upstream element in vitro | Q33831257 | ||
Nucleosome reconstitution on plasmid-inserted poly(dA) . poly(dT) | Q33927820 | ||
The structure of DNA in the nucleosome core | Q33965908 | ||
Multimerization-cyclization of DNA fragments as a method of conformational analysis | Q34174353 | ||
Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique dinucleotide steps | Q34352331 | ||
Predicting indirect readout effects in protein-DNA interactions | Q34375170 | ||
Genome-scale identification of nucleosome positions in S. cerevisiae | Q34427114 | ||
A high-resolution atlas of nucleosome occupancy in yeast | Q34688532 | ||
Chromatin and core particles formed from the inner histones and synthetic polydeoxyribonucleotides of defined sequence | Q35751750 | ||
Poly(dA).poly(dT) rich sequences are not sufficient to exclude nucleosome formation in a constitutive yeast promoter | Q35845644 | ||
Statistical distributions of nucleosomes: nonrandom locations by a stochastic mechanism | Q36058611 | ||
Formation of boundaries of transcriptionally silent chromatin by nucleosome-excluding structures | Q36420584 | ||
Constitutive and inducible Saccharomyces cerevisiae promoters: evidence for two distinct molecular mechanisms | Q36899311 | ||
Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast | Q37539289 | ||
Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure. | Q37697997 | ||
Chromatin remodeling during Saccharomyces cerevisiae ADH2 gene activation | Q38358518 | ||
Poly(dA-dT) promoter elements increase the equilibrium accessibility of nucleosomal DNA target sites | Q39459477 | ||
Distinct frequency-distributions of homopolymeric DNA tracts in different genomes | Q39724816 | ||
Energetics of base pair opening in a DNA dodecamer containing an A3T3tract | Q40394306 | ||
Wrapping of genomic polydA.polydT tracts around nucleosome core particles | Q40421099 | ||
Destabilization of nucleosomes by an unusual DNA conformation adopted by poly(dA) small middle dotpoly(dT) tracts in vivo | Q40429996 | ||
Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA. | Q40500880 | ||
Nucleosome cores reconstituted from poly (dA-dT) and the octamer of histones | Q40501724 | ||
Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences. | Q40813511 | ||
A poly(dA.dT) tract is a component of the recombination initiation site at the ARG4 locus in Saccharomyces cerevisiae | Q41177000 | ||
A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome | Q41336121 | ||
Dual role of sequence-dependent DNA curvature in nucleosome stability: the critical test of highly bent Crithidia fasciculata DNA tract | Q42619443 | ||
High-resolution structure of an extended A-tract: [d(CGCAAATTTGCG)]2. | Q45162198 | ||
Datin, a yeast poly(dA:dT)-binding protein, behaves as an activator of the wild-type ILV1 promoter and interacts synergistically with Reb1p. | Q48012467 | ||
Sequence-dependent DNA structure: a database of octamer structural parameters | Q48227488 | ||
Functional analysis of a homopolymeric (dA-dT) element that provides nucleosomal access to yeast and mammalian transcription factors. | Q50143851 | ||
Dependence of DNA helix flexibility on base composition. | Q50927607 | ||
High-throughput mapping of the chromatin structure of human promoters. | Q51582234 | ||
Thermodynamics and premelting conformational changes of phased (dA)5 tracts. | Q52387977 | ||
Imino proton exchange in DNA catalyzed by ammonia and trimethylamine: evidence for a secondary long-lived open state of the base pair. | Q53918752 | ||
Sequence dependence of the helical repeat of DNA in solution | Q59085719 | ||
Helical periodicity of DNA determined by enzyme digestion | Q59097842 | ||
Cooperativity in A-tract structure and the bending properties of composite TnAn blocks | Q60357634 | ||
Evidence from base-pair kinetics for two types of adenine tract structures in solution: their relation to DNA curvature | Q68045082 | ||
Distinguishing between mechanisms of eukaryotic transcriptional activation with bacteriophage T7 RNA polymerase | Q68180560 | ||
The unusual conformation adopted by the adenine tracts in kinetoplast DNA | Q70169579 | ||
Modulation of cyclobutane pyrimidine dimer formation in a positioned nucleosome containing poly(dA.dT) tracts | Q71165671 | ||
Dual role of DNA intrinsic curvature and flexibility in determining nucleosome stability | Q74579910 | ||
Nucleosome core particles containing a poly(dA.dT) sequence element exhibit a locally distorted DNA structure | Q79964154 | ||
P433 | issue | 1 | |
P304 | page(s) | 65-71 | |
P577 | publication date | 2009-02-07 | |
P1433 | published in | Current Opinion in Structural Biology | Q15758416 |
P1476 | title | Poly(dA:dT) tracts: major determinants of nucleosome organization | |
P478 | volume | 19 |
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