High nucleosome occupancy is encoded at human regulatory sequences

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High nucleosome occupancy is encoded at human regulatory sequences is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2010PLoSO...5.9129T
P356DOI10.1371/JOURNAL.PONE.0009129
P932PMC publication ID2817738
P698PubMed publication ID20161746
P5875ResearchGate publication ID41453543

P50authorEran SegalQ5384865
Andrea J GossettQ57956292
Jason D LiebQ109084133
Noam KaplanQ42388921
P2093author name stringTimothy R Hughes
Jonathan Widom
Yvonne Fondufe-Mittendorf
Desiree Tillo
Yair Field
Irene K Moore
P2860cites workChromatin organization marks exon-intron structureQ57058000
Dynamics of Replication-Independent Histone Turnover in Budding YeastQ57233862
Digestion of nucleosomes with deoxyribonucleases I and IIQ69705452
A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sitesQ71093565
New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioningQ74352513
Mapping DNase-I hypersensitive sites on human isochoresQ81151992
Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeastQ81836844
The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genomeQ21092478
Genome-wide analysis of transcription factor binding sites based on ChIP-Seq dataQ24595121
Analysis of the vertebrate insulator protein CTCF-binding sites in the human genomeQ24648552
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioningQ24650871
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domainsQ24655087
FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatinQ24673476
The architecture of mammalian ribosomal protein promotersQ24802303
High-resolution profiling of histone methylations in the human genomeQ27860906
CpG islands in vertebrate genomesQ27861045
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genomeQ28131828
High-resolution mapping and characterization of open chromatin across the genomeQ28266995
Dynamic regulation of nucleosome positioning in the human genomeQ29615046
Substantial biases in ultra-short read data sets from high-throughput DNA sequencingQ29617050
Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq dataQ31169616
Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genomeQ33294656
All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissuesQ33318321
Visualizing chromatin dynamics in intact cells.Q33357197
G+C content dominates intrinsic nucleosome occupancyQ33520380
Organization of spacer DNA in chromatinQ33987425
Nucleosome-mediated cooperativity between transcription factorsQ34450175
A high-resolution atlas of nucleosome occupancy in yeastQ34688532
The DNA-encoded nucleosome organization of a eukaryotic genomeQ34907179
From DNA sequence to transcriptional behaviour: a quantitative approachQ34985690
GA-binding protein transcription factor: a review of GABP as an integrator of intracellular signaling and protein-protein interactionsQ35646271
Nucleosome positioning signals in genomic DNAQ35914766
A Human Globin Enhancer Causes both Discrete and Widespread Alterations in Chromatin StructureQ37057003
Poly(dA:dT) tracts: major determinants of nucleosome organizationQ37390093
Granulocyte-macrophage colony-stimulating factor enhancer activation requires cooperation between NFAT and AP-1 elements and is associated with extensive nucleosome reorganization.Q39962201
A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodelingQ42252373
Stable co-occupancy of transcription factors and histones at the HIV-1 enhancerQ42616749
DBTSS: database of transcription start sites, progress report 2008.Q43032565
DNA instructed displacement of histones H2A and H2B at an inducible promoterQ45138457
Re-cracking the nucleosome positioning codeQ46425585
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue2
P407language of work or nameEnglishQ1860
P304page(s)e9129
P577publication date2010-02-09
P1433published inPLOS OneQ564954
P1476titleHigh nucleosome occupancy is encoded at human regulatory sequences
P478volume5

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cites work (P2860)
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