| human | Q5 |
| P106 | occupation | author | Q482980 |
| Q38307684 | A chromatin-mediated mechanism for specification of conditional transcription factor targets |
| Q43808956 | A detailed protocol for formaldehyde-assisted isolation of regulatory elements (FAIRE). |
| Q35113815 | A guanosine-centric mechanism for RNA chaperone function |
| Q27933656 | A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters |
| Q33687905 | A map of open chromatin in human pancreatic islets |
| Q41925429 | A positive but complex association between meiotic double-strand break hotspots and open chromatin in Saccharomyces cerevisiae |
| Q37789529 | Allele-specific and heritable chromatin signatures in humans |
| Q41027903 | Alterations to chromatin in intestinal macrophages link IL-10 deficiency to inappropriate inflammatory responses |
| Q34472347 | An assessment of histone-modification antibody quality |
| Q36511978 | An inverse relationship to germline transcription defines centromeric chromatin in C. elegans |
| Q21092436 | Analysis of the Basidiomycete Coprinopsis cinerea reveals conservation of the core meiotic expression program over half a billion years of evolution |
| Q34548272 | Broad chromosomal domains of histone modification patterns in C. elegans |
| Q37421554 | C. elegans dosage compensation: a window into mechanisms of domain-scale gene regulation |
| Q34613778 | Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2 |
| Q39996434 | Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells |
| Q28274448 | ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia |
| Q24813756 | ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data |
| Q34486035 | Comparative analysis of metazoan chromatin organization |
| Q42869231 | Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodology |
| Q42584369 | Correction: Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association |
| Q83488224 | DNA Immunoprecipitation (DIP) for the Determination of DNA-Binding Specificity |
| Q37274531 | DNA-binding specificity and in vivo targets of Caenorhabditis elegans nuclear factor I. |
| Q22066251 | Defining functional DNA elements in the human genome |
| Q36622852 | Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster |
| Q24673476 | FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin |
| Q42555768 | Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization |
| Q33741805 | Genome-wide analysis links emerin to neuromuscular junction activity in Caenorhabditis elegans. |
| Q44006423 | Genome-wide measurement of protein-DNA binding dynamics using competition ChIP. |
| Q35926498 | Genome-wide protein-DNA binding dynamics suggest a molecular clutch for transcription factor function |
| Q38316562 | Global analysis of the relationship between the binding of the Bas1p transcription factor and meiosis-specific double-strand DNA breaks in Saccharomyces cerevisiae |
| Q27331824 | H4K20me1 contributes to downregulation of X-linked genes for C. elegans dosage compensation |
| Q34087197 | Heritable individual-specific and allele-specific chromatin signatures in humans |
| Q42588662 | High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans |
| Q33531768 | High nucleosome occupancy is encoded at human regulatory sequences |
| Q41843323 | Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae |
| Q79767983 | How to find an opening (or lots of them) |
| Q21061203 | Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project |
| Q34318265 | In vivo effects of histone H3 depletion on nucleosome occupancy and position in Saccharomyces cerevisiae |
| Q42961294 | Integral nuclear pore proteins bind to Pol III-transcribed genes and are required for Pol III transcript processing in C. elegans |
| Q34869275 | Integrating regulatory motif discovery and genome-wide expression analysis |
| Q28301622 | Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project |
| Q35652767 | Loss of a histone deacetylase dramatically alters the genomic distribution of Spo11p-catalyzed DNA breaks in Saccharomyces cerevisiae. |
| Q79151096 | New evidence that DNA encodes its packaging |
| Q33535903 | Nucleoporins and transcription: new connections, new questions |
| Q34099759 | Nucleosome dynamics define transcriptional enhancers |
| Q37548517 | Nucleosome fragility is associated with future transcriptional response to developmental cues and stress in C. elegans |
| Q42388842 | Nucleosome sequence preferences influence in vivo nucleosome organization |
| Q34027627 | Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity |
| Q35942232 | Progress and challenges in profiling the dynamics of chromatin and transcription factor binding with DNA microarrays. |
| Q30537180 | Promoter- and RNA polymerase II-dependent hsp-16 gene association with nuclear pores in Caenorhabditis elegans |
| Q21563285 | Quantitative genetics of CTCF binding reveal local sequence effects and different modes of X-chromosome association |
| Q36406954 | Regulation of nucleosome stability as a mediator of chromatin function |
| Q37618160 | Regulation of the X chromosomes in Caenorhabditis elegans |
| Q42837860 | Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease |
| Q35185463 | STAT3 acts through pre-existing nucleosome-depleted regions bound by FOS during an epigenetic switch linking inflammation to cancer |
| Q40621656 | Single-cell ATAC-seq: strength in numbers |
| Q34241267 | Systematic evaluation of factors influencing ChIP-seq fidelity |
| Q40125902 | Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets |
| Q33463258 | Systematic identification of balanced transposition polymorphisms in Saccharomyces cerevisiae |
| Q37218490 | TRA-1 ChIP-seq reveals regulators of sexual differentiation and multilevel feedback in nematode sex determination |
| Q37437773 | The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence |
| Q34907179 | The DNA-encoded nucleosome organization of a eukaryotic genome |
| Q24595581 | The accessible chromatin landscape of the human genome |
| Q33369072 | The genomic distribution and function of histone variant HTZ-1 during C. elegans embryogenesis |
| Q33686906 | The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny. |
| Q37252776 | The open chromatin landscape of Kaposi's sarcoma-associated herpesvirus |
| Q27930306 | The stress response factors Yap6, Cin5, Phd1, and Skn7 direct targeting of the conserved co-repressor Tup1-Ssn6 in S. cerevisiae. |
| Q50078841 | Tissue- and strain-specific effects of a genotoxic carcinogen 1,3-butadiene on chromatin and transcription. |
| Q57063811 | Tu1927 Genetically Driven Chromatin Organization Identifies Regulatory SNPs Associated With Crohn's Disease |
| Q39442604 | Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription. |
| Q33745487 | Unlocking the secrets of the genome |
| Q34030307 | Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA. |
| Q47439130 | Variation in DNA-Damage Responses to an Inhalational Carcinogen (1,3-Butadiene) in Relation to Strain-Specific Differences in Chromatin Accessibility and Gene Transcription Profiles in C57BL/6J and CAST/EiJ Mice |
| Q37550216 | Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects |
| Q34455951 | What are super-enhancers? |
| Q37367035 | X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiation |
| Q33970447 | ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions |
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