scholarly article | Q13442814 |
P356 | DOI | 10.1038/NSMB.1972 |
P2888 | exact match | https://scigraph.springernature.com/pub.10.1038/nsmb.1972 |
P932 | PMC publication ID | 3017233 |
P698 | PubMed publication ID | 21131980 |
P5875 | ResearchGate publication ID | 49658687 |
P50 | author | Julie Ahringer | Q15709495 |
Isabel Latorre | Q35703615 | ||
Andrey Gorchakov | Q37383150 | ||
Paulina Kolasinska-Zwierz | Q42458264 | ||
Andreas Rechtsteiner | Q56515002 | ||
Gary H. Karpen | Q64871727 | ||
Susan Strome | Q65088229 | ||
Peter V Kharchenko | Q87103783 | ||
Jason D Lieb | Q109084133 | ||
P2093 | author name string | Sarah C R Elgin | |
Bing Ren | |||
Nicole C Riddle | |||
Peter J Park | |||
Ying Luu | |||
R David Hawkins | |||
Daniela Linder-Basso | |||
Artyom A Alekseyenko | |||
Mitzi I Kuroda | |||
Ming-Sin Cheung | |||
Tingting Gu | |||
Aki Minoda | |||
Vincenzo Pirrotta | |||
Yuri B Schwartz | |||
Sarah Gadel | |||
Daniel S Day | |||
Marc Perry | |||
Samantha Kuan | |||
Anne Vielle | |||
Kyungjoon Lee | |||
Thea A Egelhofer | |||
Paulina Kolasinska-Zwierz | |||
Gregory A Shanower | |||
Sarit Klugman | |||
Queminh Ngo | |||
P2860 | cites work | ACETYLATION AND METHYLATION OF HISTONES AND THEIR POSSIBLE ROLE IN THE REGULATION OF RNA SYNTHESIS | Q24629431 |
Chromatin modifications and their function | Q27861067 | ||
ChIP-seq: advantages and challenges of a maturing technology | Q29615336 | ||
The NIH Roadmap Epigenomics Mapping Consortium | Q29619856 | ||
The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny. | Q33686906 | ||
Unlocking the secrets of the genome | Q33745487 | ||
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells. | Q33842527 | ||
Differential chromatin marking of introns and expressed exons by H3K36me3. | Q37111430 | ||
The organization of histone H3 modifications as revealed by a panel of specific monoclonal antibodies | Q40129996 | ||
Genome-wide analysis of Polycomb targets in Drosophila melanogaster | Q40274308 | ||
P433 | issue | 1 | |
P921 | main subject | antibody | Q79460 |
reproducibility | Q1425625 | ||
replication crisis | Q25303778 | ||
P304 | page(s) | 91-93 | |
P577 | publication date | 2010-12-05 | |
P1433 | published in | Nature Structural & Molecular Biology | Q1071739 |
P1476 | title | An assessment of histone-modification antibody quality | |
P478 | volume | 18 |
Q58002185 | A Basic Post-SET Extension of NSDs Is Essential for Nucleosome Binding In Vitro |
Q26776511 | A ChIP on the shoulder? Chromatin immunoprecipitation and validation strategies for ChIP antibodies |
Q38715835 | A Scalable Epitope Tagging Approach for High Throughput ChIP-Seq Analysis. |
Q50877542 | A UTX-MLL4-p300 Transcriptional Regulatory Network Coordinately Shapes Active Enhancer Landscapes for Eliciting Transcription. |
Q36340686 | A direct label-free MALDI-TOF mass spectrometry based assay for the characterization of inhibitors of protein lysine methyltransferases. |
Q36862579 | A general molecular affinity strategy for global detection and proteomic analysis of lysine methylation |
Q36094434 | A high-resolution imaging approach to investigate chromatin architecture in complex tissues |
Q38137567 | A journey toward Bioorthogonal Profiling of Protein Methylation inside living cells |
Q90197125 | A mass spectrometry-based assay using metabolic labeling to rapidly monitor chromatin accessibility of modified histone proteins |
Q89558573 | A native chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in strawberry fruits |
Q47098359 | A validated antibody panel for the characterization of tau post-translational modifications |
Q42422374 | Activator-induced spread of poly(ADP-ribose) polymerase promotes nucleosome loss at Hsp70. |
Q38295496 | Affinity reagents for studying histone modifications & guidelines for their quality control |
Q57146396 | An Integrated Platform for Genome-wide Mapping of Chromatin States Using High-throughput ChIP-sequencing in Tumor Tissues |
Q35931550 | An Interactive Database for the Assessment of Histone Antibody Specificity |
Q34331669 | An efficient method for quantitative, single-cell analysis of chromatin modification and nuclear architecture in whole-mount ovules in Arabidopsis |
Q38623884 | Analysis of Histone Antibody Specificity with Peptide Microarrays |
Q35642876 | Analysis of model replication origins in Drosophila reveals new aspects of the chromatin landscape and its relationship to origin activity and the prereplicative complex |
Q37679360 | Analytical Protein Microarrays: Advancements Towards Clinical Applications |
Q38968520 | Antibodies That Work Again and Again and Again |
Q51656760 | Antibody recognition of histone post-translational modifications: emerging issues and future prospects. |
Q36646360 | Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation |
Q42971611 | Application of histone modification-specific interaction domains as an alternative to antibodies |
Q39324061 | Application of recombinant TAF3 PHD domain instead of anti-H3K4me3 antibody. |
Q90202160 | Assaying epigenome functions of PRMTs and their substrates |
Q36021714 | Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA |
Q41615284 | Broad ranges of affinity and specificity of anti-histone antibodies revealed by a quantitative peptide immunoprecipitation assay |
Q28075872 | CRISPR-Mediated Epigenome Editing |
Q57425003 | Caenorhabditis elegans sperm carry a histone-based epigenetic memory of both spermatogenesis and oogenesis |
Q35690516 | Calibrating ChIP-Seq with Nucleosomal Internal Standards to Measure Histone Modification Density Genome Wide |
Q28547655 | Cancer Cells Hijack PRC2 to Modify Multiple Cytokine Pathways |
Q89000005 | Cell Lysate Microarray for Mapping the Network of Genetic Regulators for Histone Marks |
Q28070111 | Cell-based assays to support the profiling of small molecules with histone methyltransferase and demethylase modulatory activity |
Q39077976 | Cellular analysis of the action of epigenetic drugs and probes |
Q33616671 | ChIP-less analysis of chromatin states |
Q51417627 | ChIP-ping the branches of the tree: functional genomics and the evolution of eukaryotic gene regulation. |
Q34644399 | ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions |
Q51083207 | ChIP-seq for the Identification of Functional Elements in the Human Genome. |
Q28274448 | ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia |
Q38851252 | ChIP-seq in studying epigenetic mechanisms of disease and promoting precision medicine: progresses and future directions |
Q37589068 | Characterization of Individual Histone Posttranslational Modifications and Their Combinatorial Patterns by Mass Spectrometry-Based Proteomics Strategies |
Q48112811 | Characterizing steroid hormone receptor chromatin binding landscapes in male and female breast cancer. |
Q89175973 | Chemical and Biochemical Perspectives of Protein Lysine Methylation |
Q38698881 | Chromatin Immunoprecipitation (ChIP) in Mouse T-cell Lines |
Q34714919 | Chromatin immunoprecipitation for human monocyte derived macrophages |
Q40449640 | Chromatin immunoprecipitation of adult murine cardiomyocytes. |
Q35923097 | Chromatin modifications, epigenetics, and how protozoan parasites regulate their lives. |
Q37983159 | Chronic pain: emerging evidence for the involvement of epigenetics |
Q39563223 | Co-ChIP enables genome-wide mapping of histone mark co-occurrence at single-molecule resolution |
Q34486035 | Comparative analysis of metazoan chromatin organization |
Q36048559 | Complete Workflow for Analysis of Histone Post-translational Modifications Using Bottom-up Mass Spectrometry: From Histone Extraction to Data Analysis |
Q35030499 | Comprehensive analysis of the chromatin landscape in Drosophila melanogaster |
Q34120132 | Configuration of a high-content imaging platform for hit identification and pharmacological assessment of JMJD3 demethylase enzyme inhibitors |
Q38365443 | Contemporary proteomic strategies for clinical epigenetic research and potential impact for the clinic. |
Q34373648 | Copy-number-aware differential analysis of quantitative DNA sequencing data |
Q40222482 | DNA methylation changes in plasticity genes accompany the formation and maintenance of memory. |
Q35329614 | DOT1L inhibits SIRT1-mediated epigenetic silencing to maintain leukemic gene expression in MLL-rearranged leukemia. |
Q38080975 | Deciphering post-translational modification codes. |
Q52360880 | Designing Epigenome Editors: Considerations of Biochemical and Locus Specificities. |
Q36292168 | Detection of PHLPP1α/β in human and mouse brain by different anti-PHLPP1 antibodies |
Q35215986 | Development and mechanistic studies of an optimized receptor for trimethyllysine using iterative redesign by dynamic combinatorial chemistry |
Q38893465 | Developmental alterations in Huntington's disease neural cells and pharmacological rescue in cells and mice |
Q56889147 | Directed evolution of a picomolar-affinity, high-specificity antibody targeting phosphorylated tau |
Q36339151 | Distribution of histone H4 modifications as revealed by a panel of specific monoclonal antibodies |
Q44889465 | Drosophila Histone Demethylase KDM4A Has Enzymatic and Non-enzymatic Roles in Controlling Heterochromatin Integrity |
Q39690333 | Dynamic and Combinatorial Landscape of Histone Modifications during the Intraerythrocytic Developmental Cycle of the Malaria Parasite. |
Q35172633 | Dynamic regulation of Schwann cell enhancers after peripheral nerve injury |
Q36212876 | Ectopic assembly of heterochromatin in Drosophila melanogaster triggered by transposable elements |
Q45932840 | Effect of Polymer Hydration State on In-Gel Immunoassays. |
Q33902853 | Elimination of undifferentiated human embryonic stem cells by cardiac glycosides |
Q36378096 | Enhanced top-down characterization of histone post-translational modifications |
Q34426602 | Enrichment of HP1a on Drosophila chromosome 4 genes creates an alternate chromatin structure critical for regulation in this heterochromatic domain |
Q88782463 | EpiProfile 2.0: A Computational Platform for Processing Epi-Proteomics Mass Spectrometry Data |
Q38018580 | Epigenetic modifications of the neuroproteome |
Q61863996 | Epigenetics of eu- and heterochromatin in inverted and conventional nuclei from mouse retina |
Q26782740 | Epigenomics and the structure of the living genome |
Q35557622 | Epigenomics of human embryonic stem cells and induced pluripotent stem cells: insights into pluripotency and implications for disease. |
Q34458535 | Euchromatin islands in large heterochromatin domains are enriched for CTCF binding and differentially DNA-methylated regions |
Q57029706 | Examining the Roles of H3K4 Methylation States with Systematically Characterized Antibodies |
Q58080272 | Extensive Characterization of Heavily Modified Histone Tails by 193 nm Ultraviolet Photodissociation Mass Spectrometry via a Middle–Down Strategy |
Q33562019 | Fluorogenic sensor platform for the histone code using receptors from dynamic combinatorial libraries |
Q39757066 | Fully Automated RNAscope In Situ Hybridization Assays for Formalin-Fixed Paraffin-Embedded Cells and Tissues |
Q39177202 | Fully automated high-throughput chromatin immunoprecipitation for ChIP-seq: identifying ChIP-quality p300 monoclonal antibodies |
Q39067631 | Functions of bromodomain-containing proteins and their roles in homeostasis and cancer. |
Q43015490 | Gene repression. H3K27me and PRC2 transmit a memory of repression across generations and during development |
Q30358248 | Generation and purification of highly specific antibodies for detecting post-translationally modified proteins in vivo. |
Q36446270 | Genome-Wide Epigenetic Studies in Human Disease: A Primer on -Omic Technologies |
Q30820486 | Genome-wide chromatin and gene expression profiling during memory formation and maintenance in adult mice |
Q34215626 | Genome-wide localization of replication factors |
Q30252934 | Genome-wide mapping of histone H3K9me2 in acute myeloid leukemia reveals large chromosomal domains associated with massive gene silencing and sites of genome instability. |
Q34864845 | Genomic architecture of histone 3 lysine 27 trimethylation during late ovine skeletal muscle development |
Q35694382 | Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer |
Q48262742 | H3K36ac Is an Evolutionary Conserved Plant Histone Modification That Marks Active Genes. |
Q34393141 | H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells |
Q27331824 | H4K20me1 contributes to downregulation of X-linked genes for C. elegans dosage compensation |
Q36520900 | HIV Tat controls RNA Polymerase II and the epigenetic landscape to transcriptionally reprogram target immune cells |
Q52769129 | Heterogeneous Antibody-Based Activity Assay for Lysine Specific Demethylase 1 (LSD1) on a Histone Peptide Substrate. |
Q64069347 | HiBiT-qIP, HiBiT-based quantitative immunoprecipitation, facilitates the determination of antibody affinity under immunoprecipitation conditions |
Q42848600 | HiHiMap: single-cell quantitation of histones and histone posttranslational modifications across the cell cycle by high-throughput imaging |
Q35037464 | High-throughput approaches for plant epigenomic studies |
Q41393964 | Histone 3 lysine 9 acetylation is a biomarker of the effects of culture on zygotes |
Q42024732 | Histone Adduction and Its Functional Impact on Epigenetics |
Q48114031 | Histone Deacetylase 1 Is Essential for Rod Photoreceptor Differentiation by Regulating Acetylation at Histone H3 Lysine 9 and Histone H4 Lysine 12 in the Mouse Retina |
Q90387740 | Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis |
Q36968977 | Histone H4 lysine 20 of Saccharomyces cerevisiae is monomethylated and functions in subtelomeric silencing |
Q37995722 | Histone marks: repairing DNA breaks within the context of chromatin |
Q34481942 | Histone methyltransferases MES-4 and MET-1 promote meiotic checkpoint activation in Caenorhabditis elegans |
Q26823316 | Histone modifications and a choice of variant: a language that helps the genome express itself |
Q38112246 | Histone modifications for human epigenome analysis |
Q26829142 | Histone regulation in the CNS: basic principles of epigenetic plasticity |
Q38212003 | Histone target selection within chromatin: an exemplary case of teamwork. |
Q26770526 | Histones and histone modifications in perinuclear chromatin anchoring: from yeast to man |
Q30693043 | Hitchhiker antigens: inconsistent ChIP results, questionable immunohistology data, and poor antibody performance may have a common factor |
Q51666157 | Host-guest chemistry that directly targets lysine methylation: synthetic host molecules as alternatives to bio-reagents. |
Q36489741 | How to avoid pitfalls in antibody use |
Q28679909 | Human Transcriptome and Chromatin Modifications: An ENCODE Perspective |
Q92758663 | Identification of dual histone modification-binding protein interaction by combining mass spectrometry and isothermal titration calorimetric analysis |
Q51581505 | Identification of lysine K18 acetylation on histone H3 peptide using gold nanoparticles' aggregation behaviour. |
Q37508182 | Identifying and characterizing regulatory sequences in the human genome with chromatin accessibility assays |
Q36519000 | Immunocapture strategies in translational proteomics. |
Q33635590 | Impact of sequencing depth in ChIP-seq experiments. |
Q50583988 | Intact Transition Epitope Mapping (ITEM). |
Q64228786 | Integrated Analysis of Acetyl-CoA and Histone Modification via Mass Spectrometry to Investigate Metabolically Driven Acetylation |
Q87987017 | Integrating Proteomics and Targeted Metabolomics to Understand Global Changes in Histone Modifications |
Q28301622 | Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project |
Q55061779 | Introducing the Affinity Binder Knockdown InitiativeA publicprivate partnership for validation of affinity reagents. |
Q85951343 | LSD1-Mediated Demethylation of H3K4me2 Is Required for the Transition from Late Progenitor to Differentiated Mouse Rod Photoreceptor |
Q26998850 | Linking genome to epigenome |
Q35903773 | MALDI imaging mass spectrometry as a novel tool for detecting histone modifications in clinical tissue samples |
Q40744514 | MARCC (Matrix-Assisted Reader Chromatin Capture): An Antibody-Free Method to Enrich and Analyze Combinatorial Nucleosome Modifications |
Q47344805 | MS Western, a method of multiplexed absolute protein quantification is a practical alternative to Western blotting. |
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Q37338498 | Mapping human epigenomes |
Q39407451 | Mass spectrometric quantification of histone post-translational modifications by a hybrid chemical labeling method |
Q34037729 | Methods for Activity Analysis of the Proteins that Regulate Histone Methylation |
Q37228815 | Methylation of histone H4 lysine 20 by PR-Set7 ensures the integrity of late replicating sequence domains in Drosophila |
Q41050244 | MicroRNA-302 switch to identify and eliminate undifferentiated human pluripotent stem cells |
Q39398080 | Middle-down proteomics: a still unexploited resource for chromatin biology |
Q28728358 | Molecular genomic research designs |
Q92949397 | Monitoring Histone Methylation (H3K9me3) Changes in Live Cells |
Q47659155 | Multiplexed ChIP-Seq Using Direct Nucleosome Barcoding: A Tool for High-Throughput Chromatin Analysis. |
Q46046104 | Multiplexing and Beyond in Biobehavioral Research |
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Q91272689 | Native internally calibrated chromatin immunoprecipitation for quantitative studies of histone post-translational modifications |
Q34680417 | Neural crest specification and migration independently require NSD3-related lysine methyltransferase activity. |
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Q57266577 | Next-generation antibodies for post-translational modifications |
Q41320670 | Novel detection of post-translational modifications in human monocyte-derived dendritic cells after chronic alcohol exposure: Role of inflammation regulator H4K12ac |
Q34115619 | Nucleosome surface containing nucleosomal DNA entry/exit site regulates H3-K36me3 via association with RNA polymerase II and Set2. |
Q64085082 | On the Necessity of Validating Antibodies in the Immunohistochemistry Literature |
Q37832806 | Operating on chromatin, a colorful language where context matters |
Q46533544 | Parallel evolution of male germline epigenetic poising and somatic development in animals. |
Q40984243 | Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution. |
Q36072539 | Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies |
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Q36444448 | Quality of histone modification antibodies undermines chromatin biology research |
Q37641967 | Quantitative Analysis and Discovery of Lysine and Arginine Modifications. |
Q36745120 | Quantitative Histone Mass Spectrometry Identifies Elevated Histone H3 Lysine 27 (Lys27) Trimethylation in Melanoma |
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