The insect-phase gRNA transcriptome in Trypanosoma brucei

scientific article published on 29 October 2013

The insect-phase gRNA transcriptome in Trypanosoma brucei is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKT973
P932PMC publication ID3919587
P698PubMed publication ID24174546
P5875ResearchGate publication ID258204760

P50authorYanni SunQ63368381
Terence C TheisenQ89936018
P2093author name stringDonna Koslowsky
Jasmin Lucas
Jordan Hindenach
P2860cites workSequence heterogeneity in kinetoplast DNA: Reassociation kineticsQ71090084
A theoretical study of random segregation of minicircles in trypanosomatidsQ77354478
Genomic organization of Trypanosoma brucei kinetoplast DNA minicirclesQ78752781
Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform ExtractionQ25938986
Alternative mRNA editing in trypanosomes is extensive and may contribute to mitochondrial protein diversityQ33319555
Identification of novel guide RNAs from the mitochondria of Trypanosoma bruceiQ33328798
Evolution of RNA editing in trypanosome mitochondriaQ33946972
Unique aspects of mitochondrial biogenesis in trypanosomatidsQ34397862
Editing of Trypanosoma brucei maxicircle CR5 mRNA generates variable carboxy terminal predicted protein sequencesQ34823171
The MURF3 gene of T. brucei contains multiple domains of extensive editing and is homologous to a subunit of NADH dehydrogenaseQ34933043
Trypanosoma brucei minicircles encode multiple guide RNAs which can direct editing of extensively overlapping sequencesQ35001485
Mitochondrial RNA processing in trypanosomesQ35141535
Uridine insertion/deletion editing in trypanosomes: a playground for RNA-guided information transferQ35158070
Alternative editing of cytochrome c oxidase III mRNA in trypanosome mitochondria generates protein diversityQ35191171
KISS: the kinetoplastid RNA editing sequence search toolQ35230520
Guide RNAs for transcripts with developmentally regulated RNA editing are present in both life cycle stages of Trypanosoma bruceiQ36814583
Extensive editing of CR2 maxicircle transcripts of Trypanosoma brucei predicts a protein with homology to a subunit of NADH dehydrogenaseQ36825292
Creation of AUG initiation codons by addition of uridines within cytochrome b transcripts of kinetoplastidsQ37483517
An intragenic guide RNA location suggests a complex mechanism for mitochondrial gene expression in Trypanosoma bruceiQ39601561
SP6 RNA polymerase stutters when initiating from an AAA... sequenceQ40506546
Maxicircle CR1 transcripts of Trypanosoma brucei are edited and developmentally regulated and encode a putative iron-sulfur protein homologous to an NADH dehydrogenase subunitQ40654645
The genomic organization of guide RNA genes in kinetoplastid protozoa: several conundrums and their solutionsQ41512803
Trypanosoma brucei mitochondrial CR4 gene encodes an extensively edited mRNA with completely edited sequence only in bloodstream formsQ42600621
Extensive editing of both processed and preprocessed maxicircle CR6 transcripts in Trypanosoma bruceiQ42617615
An extensively edited mitochondrial transcript in kinetoplastids encodes a protein homologous to ATPase subunit 6.Q42630911
RNA editing in kinetoplastidsQ43134637
The polarity of editing within a multiple gRNA-mediated domain is due to formation of anchors for upstream gRNAs by downstream editingQ44303968
Editing of kinetoplastid mitochondrial mRNAs by uridine addition and deletion generates conserved amino acid sequences and AUG initiation codonsQ46359239
Pseudo-templated transcription by Escherichia coli RNA polymerase at a mutant promoterQ46846962
Identification and characterization of trypanosome RNA-editing complex componentsQ47716851
Multiple guide RNAs for identical editing of Trypanosoma brucei apocytochrome b mRNA have an unusual minicircle location and are developmentally regulatedQ48084875
RNA editing as a source of genetic variationQ48120358
Organization of minicircle genes for guide RNAs in Trypanosoma bruceiQ48247958
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectinsectQ1390
Trypanosoma bruceiQ33244
transcriptomeQ252857
P304page(s)1873-1886
P577publication date2013-10-29
P1433published inNucleic Acids ResearchQ135122
P1476titleThe insect-phase gRNA transcriptome in Trypanosoma brucei
P478volume42

Reverse relations

cites work (P2860)
Q36340052A leucine aminopeptidase is involved in kinetoplast DNA segregation in Trypanosoma brucei.
Q36072564Analysis of the Trypanosoma brucei EATRO 164 Bloodstream Guide RNA Transcriptome
Q34761609Bloodstream form Trypanosoma brucei do not require mRPN1 for gRNA processing.
Q91996639Cell-line specific RNA editing patterns in Trypanosoma brucei suggest a unique mechanism to generate protein variation in a system intolerant to genetic mutations
Q35708189Comparison of the Mitochondrial Genomes and Steady State Transcriptomes of Two Strains of the Trypanosomatid Parasite, Leishmania tarentolae
Q38974952Constructive edge of uridylation-induced RNA degradation
Q57752787Dynamic RNA holo-editosomes with subcomplex variants: Insights into the control of trypanosome editing
Q26750664From simple to supercomplex: mitochondrial genomes of euglenozoan protists
Q36346028Gene Loss and Error-Prone RNA Editing in the Mitochondrion of Perkinsela, an Endosymbiotic Kinetoplastid.
Q57210417High throughput sequencing revolution reveals conserved fundamentals of U-indel editing
Q36812711High-throughput sequencing of partially edited trypanosome mRNAs reveals barriers to editing progression and evidence for alternative editing
Q36072312In vivo analysis of trypanosome mitochondrial RNA function by artificial site-specific RNA endonuclease-mediated knockdown.
Q64230074Intrinsic and regulated properties of minimally edited trypanosome mRNAs
Q90459807Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes
Q50059602MRB7260 is essential for productive protein-RNA interactions within the RNA Editing Substrate Binding Complex during trypanosome RNA editing
Q46844300Mitochondrial dual-coding genes in Trypanosoma brucei
Q37110947Multiple G-quartet structures in pre-edited mRNAs suggest evolutionary driving force for RNA editing in trypanosomes
Q35557665Native Variants of the MRB1 Complex Exhibit Specialized Functions in Kinetoplastid RNA Editing
Q33967980Native mitochondrial RNA-binding complexes in kinetoplastid RNA editing differ in guide RNA composition
Q64082460Protein features for assembly of the RNA editing helicase 2 subcomplex (REH2C) in Trypanosome holo-editosomes
Q34592918RNA binding and core complexes constitute the U-insertion/deletion editosome
Q58842888Recent advances in trypanosomatid research: genome organization, expression, metabolism, taxonomy and evolution
Q92026081Separating the Wheat from the Chaff: RNA Editing and Selection of Translatable mRNA in Trypanosome Mitochondria
Q59335706The 27 kDa Trypanosoma brucei Pentatricopeptide Repeat Protein is a G-tract Specific RNA Binding Protein
Q46245200Trypanosomatid mitochondrial RNA editing: dramatically complex transcript repertoires revealed with a dedicated mapping tool.
Q38768933Trypanosome RNA Editing Mediator Complex proteins have distinct functions in gRNA utilization
Q26777576Trypanosome RNA editing: the complexity of getting U in and taking U out
Q36535105U-Insertion/Deletion mRNA-Editing Holoenzyme: Definition in Sight

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