Promoter occupancy of the basal class I transcription factor A differs strongly between active and silent VSG expression sites in Trypanosoma brucei.

scientific article published on 17 December 2013

Promoter occupancy of the basal class I transcription factor A differs strongly between active and silent VSG expression sites in Trypanosoma brucei. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKT1301
P932PMC publication ID3950698
P698PubMed publication ID24353315
P5875ResearchGate publication ID259388020

P50authorTim Nicolai SiegelQ52786598
Laura S M MüllerQ86977344
P2093author name stringArthur Günzl
Sung Hee Park
Tu N Nguyen
P2860cites workA pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma bruceiQ58846342
A ribosomal DNA promoter replacing the promoter of a telomeric VSG gene expression site can be efficiently switched on and off in T. bruceiQ71806491
Differential RNA elongation controls the variant surface glycoprotein gene expression sites of Trypanosoma bruceiQ73739230
Telomeric expression sites are highly conserved in Trypanosoma bruceiQ21144222
Active VSG expression sites in Trypanosoma brucei are depleted of nucleosomesQ24647409
Stochastic gene expression in mammals: lessons from olfactionQ26825561
The Aurora Kinase in Trypanosoma brucei plays distinctive roles in metaphase-anaphase transition and cytokinetic initiationQ27316300
Fast gapped-read alignment with Bowtie 2Q27860699
Antigenic variation in Plasmodium falciparumQ27972540
Interchromosomal interactions and olfactory receptor choiceQ28254529
Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparumQ30046035
In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genesQ30310526
Purification of an eight subunit RNA polymerase I complex in Trypanosoma bruceiQ33244923
A histone methyltransferase modulates antigenic variation in African trypanosomes.Q33348749
Nucleosomes are depleted at the VSG expression site transcribed by RNA polymerase I in African trypanosomesQ33585929
A step subsequent to preinitiation complex assembly at the ribosomal RNA gene promoter is rate limiting for human RNA polymerase I-dependent transcriptionQ33967873
Histone deacetylases play distinct roles in telomeric VSG expression site silencing in African trypanosomes.Q34138783
Highly efficient tandem affinity purification of trypanosome protein complexes based on a novel epitope combinationQ34144027
Histone H1 plays a role in heterochromatin formation and VSG expression site silencing in Trypanosoma brucei.Q34469008
MCM-BP is required for repression of life-cycle specific genes transcribed by RNA polymerase I in the mammalian infectious form of Trypanosoma brucei.Q34602897
An epigenetic signature for monoallelic olfactory receptor expressionQ34981252
Active RNA polymerase I of Trypanosoma brucei harbors a novel subunit essential for transcriptionQ35950281
Multifunctional class I transcription in Trypanosoma brucei depends on a novel protein complexQ36177213
Characterization of a novel class I transcription factor A (CITFA) subunit that is indispensable for transcription by the multifunctional RNA polymerase I of Trypanosoma bruceiQ36506502
Subnuclear localization of the active variant surface glycoprotein gene expression site in Trypanosoma brucei.Q36523556
Genome-wide analysis reveals extensive functional interaction between DNA replication initiation and transcription in the genome of Trypanosoma brucei.Q36713460
Nuclear architecture underlying gene expression in Trypanosoma bruceiQ36811798
RNA turnover in Trypanosoma bruceiQ36837564
Nucleolar targeting: the hub of the matterQ37135320
RAP1 is essential for silencing telomeric variant surface glycoprotein genes in Trypanosoma brucei.Q37169037
Epigenetics and transcriptional control in African trypanosomesQ37786003
Molecular mechanisms underlying the control of antigenic variation in African trypanosomesQ37795350
Transcription by the multifunctional RNA polymerase I in Trypanosoma brucei functions independently of RPB7.Q38381579
Cell-cycle-regulated control of VSG expression site silencing by histones and histone chaperones ASF1A and CAF-1b in Trypanosoma brucei.Q38870836
In vitro analysis of alpha-amanitin-resistant transcription from the rRNA, procyclic acidic repetitive protein, and variant surface glycoprotein gene promoters in Trypanosoma bruceiQ39446620
RNA polymerase I transcribes procyclin genes and variant surface glycoprotein gene expression sites in Trypanosoma bruceiQ39774504
TDP1 is an HMG chromatin protein facilitating RNA polymerase I transcription in African trypanosomesQ41123793
The VSG C-terminal domain is inaccessible to antibodies on live trypanosomesQ41843856
A TFIIH-associated mediator head is a basal factor of small nuclear spliced leader RNA gene transcription in early-diverged trypanosomes.Q41988140
The FACT subunit TbSpt16 is involved in cell cycle specific control of VSG expression sites in Trypanosoma bruceiQ42254608
Control of variant surface glycoprotein gene-expression sites in Trypanosoma bruceiQ42680578
NLP is a novel transcription regulator involved in VSG expression site control in Trypanosoma bruceiQ42704211
A novel ISWI is involved in VSG expression site downregulation in African trypanosomesQ42805612
Characterization of subunits of the RNA polymerase I complex in Trypanosoma bruceiQ45234049
In vitro cloning of animal-infective bloodstream forms of Trypanosoma bruceiQ46191798
Heterochromatin silencing and locus repositioning linked to regulation of virulence genes in Plasmodium falciparumQ46429981
Transcription of 'inactive' expression sites in African trypanosomes leads to expression of multiple transferrin receptor RNAs in bloodstream formsQ47945678
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesImageJQ1659584
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectTrypanosoma bruceiQ33244
P304page(s)3164-3176
P577publication date2013-12-17
P1433published inNucleic Acids ResearchQ135122
P1476titlePromoter occupancy of the basal class I transcription factor A differs strongly between active and silent VSG expression sites in Trypanosoma brucei
P478volume42

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cites work (P2860)
Q38625365A Host-Pathogen Interaction Reduced to First Principles: Antigenic Variation in T. brucei
Q33743574A new strategy of RNA interference that targets heterologous sequences reveals CITFA1 as an essential component of class I transcription factor A in Trypanosoma brucei.
Q61496438A single-point mutation in the RNA-binding protein 6 generates Trypanosoma brucei metacyclics that are able to progress to bloodstream forms in vitro
Q40402942A transcription-independent epigenetic mechanism is associated with antigenic switching in Trypanosoma brucei
Q34136433Antigenic variation in African trypanosomes
Q38313497DNA double-strand breaks and telomeres play important roles in trypanosoma brucei antigenic variation
Q36434044Dynein Light Chain LC8 Is Required for RNA Polymerase I-Mediated Transcription in Trypanosoma brucei, Facilitating Assembly and Promoter Binding of Class I Transcription Factor A
Q87914242Epigenetic Regulation of Transcription in Trypanosomatid Protozoa
Q36166592High-resolution analysis of multi-copy variant surface glycoprotein gene expression sites in African trypanosomes
Q37098846Mapping replication dynamics in Trypanosoma brucei reveals a link with telomere transcription and antigenic variation.
Q40119456Metacyclic VSG expression site promoters are recognized by the same general transcription factor that is required for RNA polymerase I transcription of bloodstream expression sites
Q34747163Mono-allelic VSG expression by RNA polymerase I in Trypanosoma brucei: expression site control from both ends?
Q93015093Nuclear Phosphatidylinositol 5-Phosphatase Is Essential for Allelic Exclusion of Variant Surface Glycoprotein Genes in Trypanosomes
Q58842888Recent advances in trypanosomatid research: genome organization, expression, metabolism, taxonomy and evolution
Q38211767Ribosomal RNA gene transcription in trypanosomes.
Q36298245Selective inhibition of RNA polymerase I transcription as a potential approach to treat African trypanosomiasis
Q35751982Synchronous expression of individual metacyclic variant surface glycoprotein genes in Trypanosoma brucei
Q58614568Temperature shift activates bloodstream VSG expression site promoters in Trypanosoma brucei
Q40109240The proteome and transcriptome of the infectious metacyclic form of Trypanosoma brucei define quiescent cells primed for mammalian invasion.
Q33790035Transcription is initiated on silent variant surface glycoprotein expression sites despite monoallelic expression in Trypanosoma brucei
Q50421480Transcriptional Regulation of Telomeric Expression Sites and Antigenic Variation in Trypanosomes
Q41934797Trypanosoma brucei histone H1 inhibits RNA polymerase I transcription and is important for parasite fitness in vivo

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