Differential Tandem Mass Spectrometry-Based Cross-Linker: A New Approach for High Confidence in Identifying Protein Cross-Linking.

scientific article published on 20 September 2016

Differential Tandem Mass Spectrometry-Based Cross-Linker: A New Approach for High Confidence in Identifying Protein Cross-Linking. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1021/ACS.ANALCHEM.6B02886
P932PMC publication ID5316473
P698PubMed publication ID27649375

P50authorMichael B FesslerQ63363549
P2093author name stringGerhard R Munske
Saiful M Chowdhury
Jayanta K Chakrabarty
Aishwarya G Naik
P2860cites workThe complete structure of the large subunit of the mammalian mitochondrial ribosomeQ27695673
Ribosome. The complete structure of the 55S mammalian mitochondrial ribosomeQ27700074
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Integrated Workflow for Structural Proteomics Studies Based on Cross-Linking/Mass Spectrometry with an MS/MS Cleavable Cross-LinkerQ30313996
Chromogenic cross-linker for the characterization of protein structure by infrared multiphoton dissociation mass spectrometry.Q30369707
Comprehensive identification of disulfide bonds using non-specific proteinase K digestion and CID-cleavable crosslinking analysis methodology for Orbitrap LC/ESI-MS/MS data.Q30372534
Trifunctional cross-linker for mapping protein-protein interaction networks and comparing protein conformational statesQ30385368
Combinatorial electrostatic collision-induced dissociative chemical cross-linking reagents for probing protein surface topology.Q30390493
Xlink-identifier: an automated data analysis platform for confident identifications of chemically cross-linked peptides using tandem mass spectrometryQ30397747
Identification of cross-linked peptides from complex samples.Q30418939
Identification of cross-linked peptides after click-based enrichment using sequential collision-induced dissociation and electron transfer dissociation tandem mass spectrometryQ34011047
A new in vivo cross-linking mass spectrometry platform to define protein-protein interactions in living cells.Q34634989
Analysis of protein complexes using mass spectrometryQ34642068
CD14 dependence of TLR4 endocytosis and TRIF signaling displays ligand specificity and is dissociable in endotoxin toleranceQ35845957
Cross-linking measurements of the Potato leafroll virus reveal protein interaction topologies required for virion stability, aphid transmission, and virus-plant interactionsQ36109023
An enhanced protein crosslink identification strategy using CID-cleavable chemical crosslinkers and LC/MS(n) analysisQ36185657
Dynamics of ribosomal protein S1 on a bacterial ribosome with cross-linking and mass spectrometryQ36455708
Visualization of Host-Polerovirus Interaction Topologies Using Protein Interaction Reporter TechnologyQ36523976
Characterization of Dynamic UbR-Proteasome Subcomplexes by In vivo Cross-linking (X) Assisted Bimolecular Tandem Affinity Purification (XBAP) and Label-free QuantitationQ37076872
Developing an Acidic Residue Reactive and Sulfoxide-Containing MS-Cleavable Homobifunctional Cross-Linker for Probing Protein-Protein InteractionsQ37185015
Identification of cross-linked peptides from large sequence databasesQ37286234
Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry.Q40492197
An isotopically coded CID-cleavable biotinylated cross-linker for structural proteomicsQ42589866
Collision-induced dissociative chemical cross-linking reagents and methodology: Applications to protein structural characterization using tandem mass spectrometry analysisQ44868630
Collisionally activated dissociation and electron capture dissociation of several mass spectrometry-identifiable chemical cross-linkers.Q51094319
Mass spectrometry identifiable cross-linking strategy for studying protein-protein interactionsQ81207959
Preferential cleavage of N-N hydrazone bonds for sequencing bis-arylhydrazone conjugated peptides by electron transfer dissociationQ84410721
P433issue20
P407language of work or nameEnglishQ1860
P304page(s)10215-10222
P577publication date2016-09-28
P1433published inAnalytical ChemistryQ485223
P1476titleDifferential Tandem Mass Spectrometry-Based Cross-Linker: A New Approach for High Confidence in Identifying Protein Cross-Linking
P478volume88

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cites work (P2860)
Q52372831Comparative and network-based proteomic analysis of low dose ethanol- and lipopolysaccharide-induced macrophages.
Q46525686Cross-Linking Mass Spectrometry: An Emerging Technology for Interactomics and Structural Biology.
Q58105967Cross-linking mass spectrometry: methods and applications in structural, molecular and systems biology
Q55515163Development of a Novel Sulfoxide-Containing MS-Cleavable Homobifunctional Cysteine-Reactive Cross-Linker for Studying Protein-Protein Interactions.
Q64290938Evaluation of Different Stationary Phases in the Separation of Inter-Cross-Linked Peptides
Q47215603Inflammatory Proteomic Network Analysis of Statin-treated and Lipopolysaccharide-activated Macrophages.
Q50107547Structural prediction of protein models using distance restraints derived from cross-linking mass spectrometry data

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