Bacteria-autophagy interplay: a battle for survival

scientific article published on 02 January 2014

Bacteria-autophagy interplay: a battle for survival is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1035745568
P356DOI10.1038/NRMICRO3160
P698PubMed publication ID24384599
P5875ResearchGate publication ID259566252

P2093author name stringJohn H Brumell
Ju Huang
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Beclin-1-interacting autophagy protein Atg14L targets the SNARE-associated protein Snapin to coordinate endocytic traffickingQ24293411
Structurally distinct bacterial TBC-like GAPs link Arf GTPase to Rab1 inactivation to counteract host defensesQ24297790
Starvation and ULK1-dependent cycling of mammalian Atg9 between the TGN and endosomesQ24301020
Galectin 8 targets damaged vesicles for autophagy to defend cells against bacterial invasionQ24301905
Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cellsQ24302858
A Tecpr1-dependent selective autophagy pathway targets bacterial pathogensQ24303088
Phosphorylation of the autophagy receptor optineurin restricts Salmonella growthQ24304447
The hairpin-type tail-anchored SNARE syntaxin 17 targets to autophagosomes for fusion with endosomes/lysosomesQ24305372
The LRR and RING domain protein LRSAM1 is an E3 ligase crucial for ubiquitin-dependent autophagy of intracellular Salmonella TyphimuriumQ24306249
The small GTPases Rab9A and Rab23 function at distinct steps in autophagy during Group A Streptococcus infectionQ24309638
Dynamic and transient interactions of Atg9 with autophagosomes, but not membrane integration, are required for autophagy.Q24310187
p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagyQ24312147
TMEM59 defines a novel ATG16L1-binding motif that promotes local activation of LC3Q24313405
Microtubule-associated protein 1 light chain 3 (LC3) interacts with Bnip3 protein to selectively remove endoplasmic reticulum and mitochondria via autophagyQ24314391
Mammalian Atg18 (WIPI2) localizes to omegasome-anchored phagophores and positively regulates LC3 lipidationQ24315722
A role for NBR1 in autophagosomal degradation of ubiquitinated substratesQ24316135
Autophagosome formation depends on the small GTPase Rab1 and functional ER exit sitesQ24320195
Extracellular M. tuberculosis DNA targets bacteria for autophagy by activating the host DNA-sensing pathwayQ24601311
p62 and NDP52 proteins target intracytosolic Shigella and Listeria to different autophagy pathwaysQ24629208
The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagyQ24647053
ULK-Atg13-FIP200 complexes mediate mTOR signaling to the autophagy machineryQ24649645
Atg8 controls phagophore expansion during autophagosome formationQ24653668
ULK1.ATG13.FIP200 complex mediates mTOR signaling and is essential for autophagyQ24654787
Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cellsQ24671346
Regulation of autophagy by extracellular signal-regulated protein kinases during 1-methyl-4-phenylpyridinium-induced cell deathQ24676936
Autophagic processes in yeast: mechanism, machinery and regulationQ26822642
Recruitment of the major vault protein by InlK: a Listeria monocytogenes strategy to avoid autophagyQ27349252
Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7Q27678837
The Atg12-Atg5 conjugate has a novel E3-like activity for protein lipidation in autophagyQ27933717
Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusionQ27933991
Dual roles of Atg8-PE deconjugation by Atg4 in autophagy.Q27937267
A genomic screen for yeast mutants defective in selective mitochondria autophagyQ27938385
A protein conjugation system essential for autophagyQ27940154
Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12-Apg5 conjugateQ28187453
Ubiquitin signals autophagic degradation of cytosolic proteins and peroxisomesQ37014368
Host and bacterial factors that regulate LC3 recruitment to Listeria monocytogenes during the early stages of macrophage infectionQ37043062
Cyclic AMP: master regulator of innate immune cell function.Q37103511
Activation of antibacterial autophagy by NADPH oxidasesQ37147170
Autophagosome-independent essential function for the autophagy protein Atg5 in cellular immunity to intracellular pathogensQ37193067
Noncanonical autophagy is required for type I interferon secretion in response to DNA-immune complexesQ37206862
Autophagy genes protect against Salmonella typhimurium infection and mediate insulin signaling-regulated pathogen resistanceQ37318302
The ubiquitin ligase parkin mediates resistance to intracellular pathogensQ37458253
Mechanism of cholera toxin action: Covalent modification of the guanyl nucleotide-binding protein of the adenylate cyclase systemQ37588093
Mechanisms and consequences of bacterial targeting by the autophagy pathwayQ37812984
Autophagy-independent function of MAP-LC3 during intracellular propagation of Chlamydia trachomatisQ37851054
Interaction of Chlamydia trachomatis serovar L2 with the host autophagic pathwayQ37866731
The role of 'eat-me' signals and autophagy cargo receptors in innate immunityQ38102385
Bacterial subversion of host innate immune pathwaysQ38105533
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NBR1 acts as an autophagy receptor for peroxisomesQ39226355
An autophagy-independent role for LC3 in equine arteritis virus replicationQ39238402
Involvement of the autophagy pathway in trafficking of Mycobacterium tuberculosis bacilli through cultured human type II epithelial cellsQ39361743
Autophagy favors Brucella melitensis survival in infected macrophages.Q39389686
Coronin-1a inhibits autophagosome formation around Mycobacterium tuberculosis-containing phagosomes and assists mycobacterial survival in macrophagesQ39410318
Porphyromonas gingivalis traffics to autophagosomes in human coronary artery endothelial cellsQ39521989
The adaptor protein p62/SQSTM1 targets invading bacteria to the autophagy pathway.Q39790194
Beta1 integrin-dependent engulfment of Yersinia enterocolitica by macrophages is coupled to the activation of autophagy and suppressed by type III protein secretionQ39790221
Listeria monocytogenes ActA-mediated escape from autophagic recognitionQ39800150
LC3 conjugation system in mammalian autophagyQ28278334
Entrapment of intracytosolic bacteria by septin cage-like structuresQ28298306
Simultaneous induction of non-canonical autophagy and apoptosis in cancer cells by ROS-dependent ERK and JNK activationQ28473548
Mycobacterium tuberculosis eis regulates autophagy, inflammation, and cell death through redox-dependent signalingQ28486495
Role of LAMP-2 in lysosome biogenesis and autophagyQ28585358
Anthrax toxin edema factor: a bacterial adenylate cyclase that increases cyclic AMP concentrations of eukaryotic cellsQ28609196
A role for Atg8-PE deconjugation in autophagosome biogenesisQ28728283
Autophagy-based unconventional secretory pathway for extracellular delivery of IL-1βQ29030555
Regulation mechanisms and signaling pathways of autophagyQ29547416
Autophagy is a defense mechanism inhibiting BCG and Mycobacterium tuberculosis survival in infected macrophagesQ29547420
Toll-like receptor signalling in macrophages links the autophagy pathway to phagocytosisQ29614481
The role of the Atg1/ULK1 complex in autophagy regulationQ29614497
Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulumQ29614500
Nod1 and Nod2 direct autophagy by recruiting ATG16L1 to the plasma membrane at the site of bacterial entryQ29615618
The TBK1 adaptor and autophagy receptor NDP52 restricts the proliferation of ubiquitin-coated bacteriaQ29615619
Autophagy defends cells against invading group A StreptococcusQ29615620
Role for Rab7 in maturation of late autophagic vacuolesQ30014819
Accumulation of autophagic vacuoles and cardiomyopathy in LAMP-2-deficient miceQ30080023
The LC3 recruitment mechanism is separate from Atg9L1-dependent membrane formation in the autophagic response against SalmonellaQ30502008
Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteinsQ30512856
Atg9 vesicles are an important membrane source during early steps of autophagosome formationQ30523963
Autophagosomes induced by a bacterial Beclin 1 binding protein facilitate obligatory intracellular infectionQ30530554
Phosphatidylinositol 3-phosphatase myotubularin-related protein 6 (MTMR6) is regulated by small GTPase Rab1B in the early secretory and autophagic pathwaysQ30532150
A Diacylglycerol-Dependent Signaling Pathway Contributes to Regulation of Antibacterial AutophagyQ30540202
Bacterial invasion: Force feeding by Salmonella.Q33606853
Roles of the lipid-binding motifs of Atg18 and Atg21 in the cytoplasm to vacuole targeting pathway and autophagyQ33799778
The Burkholderia pseudomallei type III secretion system and BopA are required for evasion of LC3-associated phagocytosisQ33849013
Autophagy, cytoplasm-to-vacuole targeting pathway, and pexophagy in yeast and mammalian cells.Q33916012
Specific behavior of intracellular Streptococcus pyogenes that has undergone autophagic degradation is associated with bacterial streptolysin O and host small G proteins Rab5 and Rab7Q33991299
Serratia marcescens is able to survive and proliferate in autophagic-like vacuoles inside non-phagocytic cellsQ34013810
Coxiella burnetii localizes in a Rab7-labeled compartment with autophagic characteristicsQ34132094
Autophagosome precursor maturation requires homotypic fusionQ34203070
cAMP and EPAC are key players in the regulation of the signal transduction pathway involved in the α-hemolysin autophagic responseQ34288762
In vivo requirement for Atg5 in antigen presentation by dendritic cellsQ34376166
Actin-based motility of intracellular pathogensQ34391509
Orientia tsutsugamushi subverts dendritic cell functions by escaping from autophagy and impairing their migrationQ34542637
Antibacterial autophagy occurs at PI(3)P-enriched domains of the endoplasmic reticulum and requires Rab1 GTPaseQ34577239
Discovery of Atg5/Atg7-independent alternative macroautophagyQ34612369
Endosome-mediated autophagy: an unconventional MIIC-driven autophagic pathway operational in dendritic cellsQ34617225
Streptolysin O and its co-toxin NAD-glycohydrolase protect group A Streptococcus from Xenophagic killing.Q34769265
An Atg9-containing compartment that functions in the early steps of autophagosome biogenesisQ35005592
Autophagy is an immediate macrophage response to Legionella pneumophilaQ35060246
Macrophages rapidly transfer pathogens from lipid raft vacuoles to autophagosomesQ35060254
Autophagy-mediated reentry of Francisella tularensis into the endocytic compartment after cytoplasmic replicationQ35080775
Ammonia-induced autophagy is independent of ULK1/ULK2 kinasesQ35091072
Role for the Burkholderia pseudomallei type three secretion system cluster 1 bpscN gene in virulenceQ35191913
Regulation of chlamydial infection by host autophagy and vacuolar ATPase-bearing organelles.Q35272942
Microtubule-associated protein 1 light chain 3 alpha (LC3)-associated phagocytosis is required for the efficient clearance of dead cellsQ35409371
Autophagy machinery mediates macroendocytic processing and entotic cell death by targeting single membranesQ35571232
Selective subversion of autophagy complexes facilitates completion of the Brucella intracellular cycleQ35697369
Molecular determinants of Listeria monocytogenes virulenceQ35919880
The Atg5 Atg12 conjugate associates with innate antiviral immune responsesQ35956883
Listeriolysin O suppresses phospholipase C-mediated activation of the microbicidal NADPH oxidase to promote Listeria monocytogenes infectionQ35965356
Atg16L1 deficiency confers protection from uropathogenic Escherichia coli infection in vivoQ36079542
Cytosolic clearance of replication-deficient mutants reveals Francisella tularensis interactions with the autophagic pathwayQ36235471
ESX-1 dependent impairment of autophagic flux by Mycobacterium tuberculosis in human dendritic cellsQ36235479
Dectin-1-triggered recruitment of light chain 3 protein to phagosomes facilitates major histocompatibility complex class II presentation of fungal-derived antigens.Q36298354
Atg7 modulates p53 activity to regulate cell cycle and survival during metabolic stressQ36486911
Beclin 1 is required for starvation-enhanced, but not rapamycin-enhanced, LC3-associated phagocytosis of Burkholderia pseudomallei in RAW 264.7 cellsQ36506082
Recombinant protein rVP1 upregulates BECN1-independent autophagy, MAPK1/3 phosphorylation and MMP9 activity via WIPI1/WIPI2 to promote macrophage migrationQ36524168
Active escape of Orientia tsutsugamushi from cellular autophagyQ36558745
The autophagic induction in Helicobacter pylori-infected macrophageQ39907723
Beclin1-binding UVRAG targets the class C Vps complex to coordinate autophagosome maturation and endocytic trafficking.Q39972493
Role of non-canonical Beclin 1-independent autophagy in cell death induced by resveratrol in human breast cancer cellsQ39990852
Subversion of cellular autophagy by Anaplasma phagocytophilumQ40057648
Listeria monocytogenes evades killing by autophagy during colonization of host cellsQ40120029
Coxiella burnetii modulates Beclin 1 and Bcl-2, preventing host cell apoptosis to generate a persistent bacterial infectionQ40378276
The autophagic pathway is actively modulated by phase II Coxiella burnetii to efficiently replicate in the host cell.Q40465371
Escape of intracellular Shigella from autophagyQ40485419
Autophagy induction favours the generation and maturation of the Coxiella-replicative vacuoles.Q40506373
The cAMP-dependent protein kinases and cAMP signal transduction.Q40558061
Autophagosomes can support Yersinia pseudotuberculosis replication in macrophagesQ41435158
Yersinia pestis can reside in autophagosomes and avoid xenophagy in murine macrophages by preventing vacuole acidificationQ41439631
Vacuolating cytotoxin and variants in Atg16L1 that disrupt autophagy promote Helicobacter pylori infection in humans.Q42134594
The Legionella effector RavZ inhibits host autophagy through irreversible Atg8 deconjugationQ42155652
Autophagy induction by the pathogen receptor CD46.Q42461485
icsB: a Shigella flexneri virulence gene necessary for the lysis of protrusions during intercellular spreadQ42607219
TRAPP stimulates guanine nucleotide exchange on Ypt1pQ42943581
Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella entericaQ43533379
Phosphorylation of p47phox sites by PKC alpha, beta II, delta, and zeta: effect on binding to p22phox and on NADPH oxidase activationQ44022525
Cytoplasmic bacteria can be targets for autophagyQ44482822
Recognition of bacteria in the cytosol of Mammalian cells by the ubiquitin systemQ44877986
Coronaviruses Hijack the LC3-I-positive EDEMosomes, ER-derived vesicles exporting short-lived ERAD regulators, for replicationQ44986570
The Hansenula polymorpha PDD7 gene is essential for macropexophagy and microautophagyQ47965693
Amino acid starvation induced by invasive bacterial pathogens triggers an innate host defense programQ50026118
Bacterial toxins can inhibit host cell autophagy through cAMP generationQ50041777
Autophagy controls Salmonella infection in response to damage to the Salmonella-containing vacuoleQ50083524
Defects in autophagy favour adherent-invasive Escherichia coli persistence within macrophages leading to increased pro-inflammatory response.Q50503026
Alpha-hemolysin is required for the activation of the autophagic pathway in Staphylococcus aureus-infected cells.Q51775038
How shall I eat thee?Q51983235
Calpain-mediated cleavage of Atg5 switches autophagy to apoptosis.Q53597468
Staphylococcus aureusSubvert Autophagy for Induction of Caspase-independent Host Cell DeathQ56777113
Beclin 1-independent autophagy contributes to apoptosis in cortical neuronsQ57652033
Role of cAMP in the regulation of hepatocytic autophagyQ71047825
IcsB, secreted via the type III secretion system, is chaperoned by IpgA and required at the post-invasion stage of Shigella pathogenicityQ73406278
Autophagy limits Listeria monocytogenes intracellular growth in the early phase of primary infectionQ79495029
Mycobacterium marinum induces a marked LC3 recruitment to its containing phagosome that depends on a functional ESX-1 secretion systemQ83742332
Shigella phagocytic vacuolar membrane remnants participate in the cellular response to pathogen invasion and are regulated by autophagyQ84410016
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectautophagyQ288322
bacteriaQ10876
P304page(s)101-114
P577publication date2014-01-02
P1433published inNature Reviews MicrobiologyQ1071797
P1476titleBacteria-autophagy interplay: a battle for survival
P478volume12

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Q35701678Small-molecule enhancers of autophagy modulate cellular disease phenotypes suggested by human genetics
Q56340683Spatial, Temporal, and Functional Assessment of LC3-Dependent Autophagy in Shigella flexneri Dissemination
Q37041854Strategies Used by Bacteria to Grow in Macrophages
Q38658928Studying Autophagy in Zebrafish.
Q38905142Superoxide dismutase of Streptococcus suis serotype 2 plays a role in anti-autophagic response by scavenging reactive oxygen species in infected macrophages
Q92607375Targeted interplay between bacterial pathogens and host autophagy
Q38643178Targeting of host organelles by pathogenic bacteria: a sophisticated subversion strategy
Q36387165The IL-12 Response of Primary Human Dendritic Cells and Monocytes to Toxoplasma gondii Is Stimulated by Phagocytosis of Live Parasites Rather Than Host Cell Invasion.
Q64082372The Intracellular Life Cycle of spp
Q36125882The Legionella Anti-autophagy Effector RavZ Targets the Autophagosome via PI3P- and Curvature-Sensing Motifs
Q90395959The Lipid Virulence Factors of Mycobacterium tuberculosis Exert Multilayered Control over Autophagy-Related Pathways in Infected Human Macrophages
Q26742170The Mucosal Immune System and Its Regulation by Autophagy
Q37194679The Noncanonical Role of ULK/ATG1 in ER-to-Golgi Trafficking Is Essential for Cellular Homeostasis
Q35128752The autophagic machinery ensures nonlytic transmission of mycobacteria
Q38263749The bacterial pathogen-ubiquitin interface: lessons learned from Shigella
Q26796274The cytoskeleton in cell-autonomous immunity: structural determinants of host defence
Q26785503The different roles of selective autophagic protein degradation in mammalian cells
Q37464141The distinct fate of smooth and rough Mycobacterium abscessus variants inside macrophages.
Q93381832The double life of autophagy proteins
Q35235115The impact of host diet on Wolbachia titer in Drosophila
Q34165387The proteasome-ubiquitin system is required for efficient killing of intracellular Streptococcus pneumoniae by brain endothelial cells
Q64121264The responses of lungs and adjacent lymph nodes in responding to Yersinia pestis infection: A transcriptomic study using a non-human primate model
Q37454649The rodent malaria liver stage survives in the rapamycin-induced autophagosome of infected Hepa1-6 cells
Q34774424The role of autophagy during group B Streptococcus infection of blood-brain barrier endothelium
Q64950112The role of autophagy in the pathogenesis of exposure keratitis.
Q33730778The small GTPase RAB-11 directs polarized exocytosis of the intracellular pathogen N. parisii for fecal-oral transmission from C. elegans
Q27021382Therapeutic targeting of autophagy in neurodegenerative and infectious diseases
Q38731005Toxoplasma Effectors Targeting Host Signaling and Transcription
Q54211356Tuberculosis and the art of macrophage manipulation.
Q35726269Ubiquilin 1 Promotes IFN-γ-Induced Xenophagy of Mycobacterium tuberculosis
Q38413475Viruses and the autophagy pathway
Q38252275WIPI2b and Atg16L1: setting the stage for autophagosome formation
Q42638371Why should cell biologists study microbial pathogens?
Q35818586Yersinia pestis Requires Host Rab1b for Survival in Macrophages.
Q90002304ZFP36L1 and AUF1 Induction Contribute to the Suppression of Inflammatory Mediators Expression by Globular Adiponectin via Autophagy Induction in Macrophages
Q52590768miRNAs in Tuberculosis: New Avenues for Diagnosis and Host-Directed Therapy.

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