Unraveling Prion Protein Interactions with Aptamers and Other PrP-Binding Nucleic Acids

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Unraveling Prion Protein Interactions with Aptamers and Other PrP-Binding Nucleic Acids is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.3390/IJMS18051023
P932PMC publication ID5454936
P698PubMed publication ID28513534

P50authorBruno MacedoQ58946735
Yraima CordeiroQ37838157
P2860cites workQuadruplex DNA: sequence, topology and structureQ22065978
Base-stacking and base-pairing contributions into thermal stability of the DNA double helixQ22065979
Prion hypothesis: the end of the controversy?Q24599702
PrionsQ24633319
Formation of native prions from minimal components in vitroQ24676353
Prion diseases: immunotargets and therapyQ26741258
Molecular Selection, Modification and Development of Therapeutic Oligonucleotide AptamersQ26765458
Self-propagation of pathogenic protein aggregates in neurodegenerative diseasesQ26996441
Relative influence of hydrophobicity and net charge in the aggregation of two homologous proteins.Q51728894
Self-propagating beta-sheet polypeptide structures as prebiotic informational molecular entities: the amyloid world.Q51757971
Targeting amyloid-beta peptide (Abeta) oligomers by passive immunization with a conformation-selective monoclonal antibody improves learning and memory in Abeta precursor protein (APP) transgenic mice.Q51811574
The prion protein has DNA strand transfer properties similar to retroviral nucleocapsid protein.Q54014038
Production and Characterization of RNA Aptamers Specific for Amyloid Fibril EpitopesQ54806579
Heparin Binding by Murine Recombinant Prion Protein Leads to Transient Aggregation and Formation of RNA-Resistant SpeciesQ57084698
Selection and characterization of DNA aptamers against PrPScQ60654526
RNA and CuCl2 induced conformational changes of the recombinant ovine prion proteinQ79950620
A large ribonucleoprotein particle induced by cytoplasmic PrP shares striking similarities with the chromatoid body, an RNA granule predicted to function in posttranscriptional gene regulationQ39915581
Scrapie-like prion protein is translocated to the nuclei of infected cells independently of proteasome inhibition and interacts with chromatin.Q40558969
The prion protein has RNA binding and chaperoning properties characteristic of nucleocapsid protein NCP7 of HIV-1.Q40817022
Cofactor molecules induce structural transformation during infectious prion formationQ41820269
Screening of DNA aptamer against mouse prion protein by competitive selectionQ43189229
BetaAPP and furin mRNA concentrates in immature senile plaques in the brain of Alzheimer patientsQ44135809
Concentration and removal of prion proteins from biological solutionsQ44358317
In vitro amplification of protease-resistant prion protein requires free sulfhydryl groupsQ44393768
Binding of prion proteins to lipid membranesQ44707244
Structural determinants of conformationally selective, prion-binding aptamers.Q44719244
Nuclease resistant circular DNAs copurify with infectivity in scrapie and CJD.Q45134169
Biophysical and morphological studies on the dual interaction of non-octarepeat prion protein peptides with copper and nucleic acidsQ45144712
Polymerization of murine recombinant prion protein in nucleic acid solutionQ46243624
Preparation of aggregate-free, low molecular weight amyloid-beta for assembly and toxicity assays.Q47376910
Interaction of prion peptide HuPrP106-126 with nucleic acidQ47808057
RNA molecules stimulate prion protein conversionQ48170423
Small, highly structured RNAs participate in the conversion of human recombinant PrP(Sen) to PrP(Res) in vitroQ48214478
Predominance of neuronal mRNAs in individual Alzheimer's disease senile plaquesQ48283039
RNA sequestration to pathological lesions of neurodegenerative diseases.Q48342254
Monoclonal antibodies that target pathological assemblies of AbetaQ48363878
Polymerization of human prion peptide HuPrP 106-126 to amyloid in nucleic acid solutionQ48402933
Characterization and application of a novel RNA aptamer against the mouse prion proteinQ38314743
DNA aptamers that bind to PrP(C) and not PrP(Sc) show sequence and structure specificityQ38316301
Nonspecific prion protein-nucleic acid interactions lead to different aggregates and cytotoxic speciesQ38324510
Analysis of nucleic acid chaperoning by the prion protein and its inhibition by oligonucleotides.Q38333624
Sensitive discrimination and detection of prion disease-associated isoform with a dual-aptamer strategy by developing a sandwich structure of magnetic microparticles and quantum dotsQ38339688
RNA aptamers specifically interact with the prion protein PrP.Q38342284
Selection of aptamers for amyloid beta-protein, the causative agent of Alzheimer's disease.Q38342641
Prion-protein-specific aptamer reduces PrPSc formationQ38363420
New approaches for the selection and evaluation of anti-prion organic compoundsQ38365829
Prions: what are they good for?Q38592888
Cell Biology of Prions and Prionoids: A Status ReportQ38603988
Trends in the Design and Development of Specific Aptamers Against Peptides and Proteins.Q38777639
Therapeutic nucleic acids: current clinical status.Q38816703
The "Jekyll and Hyde" Actions of Nucleic Acids on the Prion-like Aggregation of ProteinsQ38861978
Aptamer and its applications in neurodegenerative diseasesQ38937721
Pathological implications of nucleic acid interactions with proteins associated with neurodegenerative diseasesQ39310077
Prion protein complexed to N2a cellular RNAs through its N-terminal domain forms aggregates and is toxic to murine neuroblastoma cellsQ39680285
Crystal structure of the human prion protein reveals a mechanism for oligomerizationQ27634441
Unique quadruplex structure and interaction of an RNA aptamer against bovine prion proteinQ27656952
Anti-prion activity of an RNA aptamer and its structural basisQ27675235
Binding of an RNA aptamer and a partial peptide of a prion protein: crucial importance of water entropy in molecular recognitionQ27683664
NMR structure of the mouse prion protein domain PrP(121-231)Q27733163
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymeraseQ27860794
In vitro selection of RNA molecules that bind specific ligandsQ27861109
Protein misfolding, functional amyloid, and human diseaseQ28131732
Prion diseases of humans and animals: their causes and molecular basisQ28209943
Cellular prion protein localizes to the nucleus of endocrine and neuronal cells and interacts with structural chromatin componentsQ29347112
Fast, reversible interaction of prion protein with RNA aptamers containing specific sequence patternsQ29392099
Common structure of soluble amyloid oligomers implies common mechanism of pathogenesisQ29547501
Molecular chaperones in protein folding and proteostasisQ29547715
Charge neutralization of the central lysine cluster in prion protein (PrP) promotes PrP(Sc)-like folding of recombinant PrP amyloids.Q30368863
Effect of additives on protein aggregation.Q30377982
Understanding protein non-folding.Q30385084
Getting a grip on prions: oligomers, amyloids, and pathological membrane interactionsQ30492360
Live imaging of prions reveals nascent PrPSc in cell-surface, raft-associated amyloid strings and websQ30570683
The multivesicular body is the major internal site of prion conversionQ30633753
Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigenQ30739257
RNA aptamers generated against oligomeric Abeta40 recognize common amyloid aptatopes with low specificity but high sensitivityQ30879431
Selection of RNA aptamers to the Alzheimer's disease amyloid peptideQ31037042
Characterization of 2'-fluoro-RNA aptamers that bind preferentially to disease-associated conformations of prion protein and inhibit conversion.Q31151988
Thioaptamer interactions with prion proteins: sequence-specific and non-specific binding sitesQ33283775
Selection of aptamers for molecular recognition and characterization of cancer cellsQ33285855
Synaptic targeting by Alzheimer's-related amyloid beta oligomers.Q33288786
The amino-terminal PrP domain is crucial to modulate prion misfolding and aggregationQ33433749
RNA aptamers selected against amyloid beta-peptide (Abeta) inhibit the aggregation of AbetaQ33492388
Aptamers to explore prion protein interactions with nucleic acidsQ33520894
Conformational Abs recognizing a generic amyloid fibril epitopeQ34009881
Sensitive detection of pathological prion protein by cyclic amplification of protein misfoldingQ34084209
A new paradigm for aptamer therapeutic AS1411 action: uptake by macropinocytosis and its stimulation by a nucleolin-dependent mechanismQ34268342
The amyloid state and its association with protein misfolding diseases.Q34421102
Mouse-adapted scrapie infection of SN56 cells: greater efficiency with microsome-associated versus purified PrP-resQ34434726
Synthetic scrapie infectivity: interaction between recombinant PrP and scrapie brain-derived RNA.Q34458035
CJD and Scrapie Require Agent-Associated Nucleic Acids for InfectionQ34509317
Potent antiscrapie activities of degenerate phosphorothioate oligonucleotidesQ34509751
In vivo SELEX for Identification of Brain-penetrating Aptamers.Q34539526
Aptamers evolved from live cells as effective molecular probes for cancer studyQ35033059
Phosphorothioate oligonucleotides reduce PrP levels and prion infectivity in cultured cellsQ35844090
Identification and characterization of a cell membrane nucleic acid channelQ35896079
Antibody to DNA detects scrapie but not normal prion proteinQ36018267
The hypothesis of the catalytic action of nucleic acid on the conversion of prion proteinQ36074709
Copper-induced structural conversion templates prion protein oligomerization and neurotoxicity.Q36078399
Fibril specific, conformation dependent antibodies recognize a generic epitope common to amyloid fibrils and fibrillar oligomers that is absent in prefibrillar oligomersQ36178075
Bioactive and nuclease-resistant L-DNA ligand of vasopressinQ36591985
Conformation-dependent anti-amyloid oligomer antibodiesQ36625938
Cross-talk between prion protein and quadruplex-forming nucleic acids: a dynamic complex formationQ36668697
Anti-bovine prion protein RNA aptamer containing tandem GGA repeat interacts both with recombinant bovine prion protein and its beta isoform with high affinityQ37080546
Identification of an intracellular site of prion conversionQ37170450
The emerging concept of functional amyloidQ37389642
Aptamer identification of brain tumor-initiating cellsQ37601425
PrP interactions with nucleic acids and glycosaminoglycans in function and diseaseQ37663171
Aptamer-based molecular recognition for biosensor development.Q37774275
Nucleic acid-mediated protein aggregation and assemblyQ37918635
The amyloid state of proteins in human diseasesQ37994283
Elucidating the role of cofactors in mammalian prion propagationQ38173629
Cell-to-cell transmission of pathogenic proteins in neurodegenerative diseasesQ38185934
Dialysis: a characterization method of aggregation tendency.Q38275238
Aptamers as targeted therapeutics: current potential and challengesQ38290290
Application of a novel in vitro selection technique to isolate and characterise high affinity DNA aptamers binding mammalian prion proteinsQ38291515
A label-free and cascaded dual-signaling amplified electrochemical aptasensing platform for sensitive prion assayQ38292391
DNA converts cellular prion protein into the beta-sheet conformation and inhibits prion peptide aggregationQ38295713
Aptamer-mediated magnetic and gold-coated magnetic nanoparticles as detection assay for prion protein assessment.Q38298184
G-quadruplexes within prion mRNA: the missing link in prion disease?Q38305734
In vitro selection of RNA aptamers against cellular and abnormal isoform of mouse prion proteinQ38306813
Structural insights into the interaction between prion protein and nucleic acidQ38311203
P275copyright licenseCreative Commons AttributionQ6905323
P6216copyright statuscopyrightedQ50423863
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectnucleotideQ28745
membrane proteinQ423042
transport proteinQ2111029
prionQ47051
prion protein familyQ24724413
nucleotide aptamersQ49849144
P577publication date2017-05-17
P1433published inInternational Journal of Molecular SciencesQ3153277
P1476titleUnraveling Prion Protein Interactions with Aptamers and Other PrP-Binding Nucleic Acids
P478volume18

Reverse relations

cites work (P2860)
Q52351526Amyloid and the origin of life: self-replicating catalytic amyloids as prebiotic informational and protometabolic entities.
Q55007427Aptamers Selected for Recognizing Amyloid β-Protein-A Case for Cautious Optimism.
Q50066811Aptamers in HIV research diagnosis and therapy.
Q92152821Characterization of the Prion Protein Binding Properties of Antisense Oligonucleotides
Q92150816Mutations in Prion Protein Gene: Pathogenic Mechanisms in C-Terminal vs. N-Terminal Domain, a Review
Q47104247Nucleic Acid Aptamers: Emerging Applications in Medical Imaging, Nanotechnology, Neurosciences, and Drug Delivery.
Q93332846Prion Protein PRNP: A New Player in Innate Immunity? The Aβ Connection
Q89563089Prion protein PrP nucleic acid binding and mobilization implicates retroelements as the replicative component of transmissible spongiform encephalopathy
Q46756184Prion-Like Domains in Phagobiota

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