Solution structure of family 21 carbohydrate-binding module from Rhizopus oryzae glucoamylase

scientific article published on April 2007

Solution structure of family 21 carbohydrate-binding module from Rhizopus oryzae glucoamylase is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1042/BJ20061312
P932PMC publication ID1828892
P698PubMed publication ID17117925
P5875ResearchGate publication ID6679942

P2093author name stringPing-Chiang Lyu
Yen-Ting Lai
Margaret Dah-Tsyr Chang
Wei-I Chou
Yu-Nan Liu
P2860cites workThe molecular mechanism by which insulin stimulates glycogen synthesis in mammalian skeletal muscleQ59069709
A new clan of CBM families based on bioinformatics of starch-binding domains from families CBM20 and CBM21Q59462274
Different behavior towards raw starch of three forms of glucoamylase from a Rhizopus spQ69978933
The role of glucosamine sulfate and chondroitin sulfates in the treatment of degenerative joint diseaseQ74585816
What Controls the Amount and Structure of Starch in Storage Organs?Q74781283
V-Amylose at atomic resolution: X-ray structure of a cycloamylose with 26 glucose residues (cyclomaltohexaicosaose)Q27617891
Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 1 with malto-oligosaccharides demonstrate the role of domain N acting as a starch-binding domainQ27642833
Solution structure of the granular starch binding domain of glucoamylase from Aspergillus niger by nuclear magnetic resonance spectroscopyQ27733149
Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrinQ27739804
Three-dimensional structure of Pseudomonas isoamylase at 2.2 A resolutionQ27765170
Refinement of protein structures in explicit solventQ27860639
Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutionsQ27860828
Protein backbone angle restraints from searching a database for chemical shift and sequence homologyQ27861108
The solution structure of HIV-1 Nef reveals an unexpected fold and permits delineation of the binding surface for the SH3 domain of Hck tyrosine protein kinaseQ28647550
Carbohydrate-binding modules: fine-tuning polysaccharide recognitionQ29547768
Assignment validation software suite for the evaluation and presentation of protein resonance assignment dataQ30899668
A census of carbohydrate-active enzymes in the genome of Arabidopsis thaliana.Q34091034
Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.Q34363664
A structural and functional analysis of alpha-glucan recognition by family 25 and 26 carbohydrate-binding modules reveals a conserved mode of starch recognitionQ34460357
Identification of the separate domains in the hepatic glycogen-targeting subunit of protein phosphatase 1 that interact with phosphorylase a, glycogen and protein phosphatase 1.Q34482352
Structural enzymology of carbohydrate-active enzymes: implications for the post-genomic era.Q34649962
Biofilm formation and dispersal in Xanthomonas campestris.Q35781378
Determination of three-dimensional structures of proteins from interproton distance data by dynamical simulated annealing from a random array of atoms. Circumventing problems associated with foldingQ36437269
Transcriptional regulation by antitermination. Interaction of RNA with NusB protein and NusB/NusE protein complex of Escherichia coliQ38291392
Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site.Q38313746
The family 21 carbohydrate-binding module of glucoamylase from Rhizopus oryzae consists of two sites playing distinct roles in ligand bindingQ38315360
Pseudomonas cellulose-binding domains mediate their effects by increasing enzyme substrate proximityQ38338200
Aromatic stacking in the sugar binding site of the lactose permeaseQ38357850
Analysis of the raw starch-binding domain by mutation of a glucoamylase from Aspergillus awamori var. kawachi expressed in Saccharomyces cerevisiaeQ39916526
Structure of the human glycogen-associated protein phosphatase 1 regulatory subunit hGM: homology modeling revealed an (alpha/beta)8-barrel-like fold in the multidomain proteinQ42247894
A common variant in PPP1R3 associated with insulin resistance and type 2 diabetesQ43506039
Role of hydrogen bonding in the interaction between a xylan binding module and xylanQ43600298
Importance of hydrophobic and polar residues in ligand binding in the family 15 carbohydrate-binding module from Cellvibrio japonicus Xyn10C.Q44537513
NMR chemical shift perturbation study of the N-terminal domain of Hsp90 upon binding of ADP, AMP-PNP, geldanamycin, and radicicolQ44578581
Structural perturbations in human ADP ribosylation factor-1 accompanying the binding of phosphatidylinositidesQ45174837
The starch-binding domain from glucoamylase disrupts the structure of starchQ46793976
Function of conserved tryptophans in the Aspergillus niger glucoamylase 1 starch binding domain.Q52261990
Both binding sites of the starch-binding domain of Aspergillus niger glucoamylase are essential for inducing a conformational change in amylose 1 1Edited by R. HuberQ54510731
Identification by NMR of the binding surface for the histidine-containing phosphocarrier protein HPr on the N-terminal domain of enzyme I of the Escherichia coli phosphotransferase system.Q54567671
Trp22, Trp24, and Tyr8 Play a Pivotal Role in the Binding of the Family 10 Cellulose-Binding Module fromPseudomonasXylanase A to Insoluble Ligands+Q57970653
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectRhizopus oryzaeQ3024179
solution structureQ99235426
P304page(s)21-30
P577publication date2007-04-01
P1433published inBiochemical JournalQ864221
P1476titleSolution structure of family 21 carbohydrate-binding module from Rhizopus oryzae glucoamylase
P478volume403