| scholarly article | Q13442814 |
| P50 | author | Gary Stacey | Q88395432 |
| P2093 | author name string | Scott A Jackson | |
| Paul L Auer | |||
| Andrew Farmer | |||
| Marc Libault | |||
| Rebecca W Doerge | |||
| Jessica Schlueter | |||
| Anne Roulin | |||
| Greg May | |||
| P2860 | cites work | Polyploid Incidence and Evolution | Q22065392 |
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| Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus | Q28740285 | ||
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| Sequence conservation of homeologous bacterial artificial chromosomes and transcription of homeologous genes in soybean (Glycine max L. Merr.). | Q38583451 | ||
| Organ and cell type-specific complementary expression patterns and regulatory neofunctionalization between duplicated genes in Arabidopsis thaliana | Q39935489 | ||
| Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus | Q39996455 | ||
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| Angiosperm diversification and paleolatitudinal gradients in cretaceous floristic diversity. | Q44958369 | ||
| Molecular and chromosomal evidence for allopolyploidy in soybean | Q45139934 | ||
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| Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids | Q46064782 | ||
| Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean. | Q46325461 | ||
| Genome duplication led to highly selective expansion of the Arabidopsis thaliana proteome. | Q47320719 | ||
| Testing the polyploid past of soybean using a low-copy nuclear gene--is Glycine (Fabaceae: Papilionoideae) an auto- or allopolyploid? | Q48106561 | ||
| Darwin's second 'abominable mystery': Why are there so many angiosperm species? | Q51164656 | ||
| Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). | Q51188785 | ||
| Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation. | Q51642803 | ||
| Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. | Q51848359 | ||
| i-ADHoRe 2.0: an improved tool to detect degenerated genomic homology using genomic profiles. | Q51902757 | ||
| Molecular investigations in populations of Spartina anglica C.E. Hubbard (Poaceae) invading coastal Brittany (France). | Q53145951 | ||
| The origins of genomic duplications in Arabidopsis. | Q53900352 | ||
| ACCESSORY COSTS OF SEED PRODUCTION AND THE EVOLUTION OF ANGIOSPERMS | Q58396302 | ||
| Quantitative analyses of the early angiosperm radiation | Q59088216 | ||
| Circos: an information aesthetic for comparative genomics | Q29547653 | ||
| Ancestral polyploidy in seed plants and angiosperms | Q29617362 | ||
| Neofunctionalization within the Omp85 protein superfamily during chloroplast evolution. | Q30155376 | ||
| Rapid divergence in expression between duplicate genes inferred from microarray data | Q30748127 | ||
| The evolution of the SEPALLATA subfamily of MADS-box genes: a preangiosperm origin with multiple duplications throughout angiosperm history | Q31145652 | ||
| Evidence of interaction network evolution by whole-genome duplications: a case study in MADS-box proteins | Q33266895 | ||
| Testing the ratio of two poisson rates | Q33321903 | ||
| Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution | Q33328698 | ||
| Genomic expression dominance in allopolyploids | Q33437873 | ||
| On the road to diploidization? Homoeolog loss in independently formed populations of the allopolyploid Tragopogon miscellus (Asteraceae) | Q33475177 | ||
| Statistical design and analysis of RNA sequencing data | Q33571320 | ||
| Angiosperm genome comparisons reveal early polyploidy in the monocot lineage | Q33591519 | ||
| Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia | Q33713226 | ||
| Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat | Q33880570 | ||
| Modeling gene and genome duplications in eukaryotes | Q33936694 | ||
| Extensive and continuous duplication facilitates rapid evolution and diversification of gene families | Q34160034 | ||
| Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana | Q34199941 | ||
| Dosage sensitivity and the evolution of gene families in yeast | Q34213245 | ||
| Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus | Q34306246 | ||
| Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication | Q34479450 | ||
| Genome duplication and the origin of angiosperms | Q34526229 | ||
| Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing | Q34532390 | ||
| Wheat hybridization and polyploidization results in deregulation of small RNAs | Q35065506 | ||
| Molecular evolution of vertebrate sex-determining genes | Q35757473 | ||
| The evolutionary dynamics of plant duplicate genes | Q36064243 | ||
| Global studies of cell type-specific gene expression in plants | Q36466534 | ||
| Preferential subfunctionalization of slow-evolving genes after allopolyploidization in Xenopus laevis | Q36751501 | ||
| When gene marriages don't work out: divorce by subfunctionalization | Q36785418 | ||
| Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium) | Q37215199 | ||
| Evolutionary genetics of genome merger and doubling in plants | Q37317018 | ||
| Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition | Q37539972 | ||
| Genome evolution in allopolyploid wheat--a revolutionary reprogramming followed by gradual changes | Q37603878 | ||
| The flowering world: a tale of duplications | Q37612237 | ||
| Polyploidy and genome restructuring: a variety of outcomes | Q37630019 | ||
| Genome and gene duplications and gene expression divergence: a view from plants | Q37976849 | ||
| P433 | issue | 1 | |
| P921 | main subject | polyploidy | Q213410 |
| P304 | page(s) | 143-153 | |
| P577 | publication date | 2012-10-22 | |
| P1433 | published in | The Plant Journal | Q15766987 |
| P1476 | title | The fate of duplicated genes in a polyploid plant genome | |
| P478 | volume | 73 |
| Q38461079 | A Comparative Epigenomic Analysis of Polyploidy-Derived Genes in Soybean and Common Bean |
| Q88294881 | A Y-Encoded Suppressor of Feminization Arose via Lineage-Specific Duplication of a Cytokinin Response Regulator in Kiwifruit |
| Q46339016 | A comparative genomic and transcriptomic analysis at the level of isolated root hair cells reveals new conserved root hair regulatory elements |
| Q26809969 | A criticism of the value of midparent in polyploidization |
| Q46606470 | A high frequency of allopolyploid speciation in the gymnospermous genus Ephedra and its possible association with some biological and ecological features. |
| Q64068751 | A likelihood ratio test for changes in homeolog expression bias |
| Q35683685 | A roadmap for functional structural variants in the soybean genome |
| Q37677299 | Ancient gene duplicates in Gossypium (cotton) exhibit near-complete expression divergence |
| Q64108874 | Characterization of the Spatial and Temporal Expression of Two Soybean miRNAs Identifies SCL6 as a Novel Regulator of Soybean Nodulation |
| Q28686904 | Circadian rhythms of sense and antisense transcription in sugarcane, a highly polyploid crop |
| Q57295862 | Comparative analysis of selection mode reveals different evolutionary rate and expression pattern in Arachis duranensis and Arachis ipaënsis duplicated genes |
| Q33732246 | Comparative transcript profiling of the fertile and sterile flower buds of pol CMS in B. napus |
| Q92526886 | Comparing time series transcriptome data between plants using a network module finding algorithm |
| Q36517664 | Comprehensive Comparative Genomic and Transcriptomic Analyses of the Legume Genes Controlling the Nodulation Process |
| Q50732704 | Comprehensive analyses of microRNA gene evolution in paleopolyploid soybean genome. |
| Q97066835 | Computational identification of receptor-like kinases "RLK" and receptor-like proteins "RLP" in legumes |
| Q46953767 | Concerted evolution of D1 and D2 to regulate chlorophyll degradation in soybean |
| Q38887728 | Conservation and diversification of polycomb repressive complex 2 (PRC2) proteins in the green lineage. |
| Q35084451 | Conserved CO-FT regulons contribute to the photoperiod flowering control in soybean |
| Q35853725 | Construction of a high-density mutant library in soybean and development of a mutant retrieval method using amplicon sequencing |
| Q38730733 | Creating Order from Chaos: Epigenome Dynamics in Plants with Complex Genomes. |
| Q35863502 | Cytonuclear Coordination Is Not Immediate upon Allopolyploid Formation in Tragopogon miscellus (Asteraceae) Allopolyploids |
| Q35626658 | Differential gene expression and alternative splicing between diploid and tetraploid watermelon. |
| Q41440292 | Distribution and evolution of the lectin family in soybean (Glycine max). |
| Q36295367 | Divergence in Enzymatic Activities in the Soybean GST Supergene Family Provides New Insight into the Evolutionary Dynamics of Whole-Genome Duplicates. |
| Q33799824 | Drought Stress Causes a Reduction in the Biosynthesis of Ascorbic Acid in Soybean Plants. |
| Q48120681 | Duplicated RGS (Regulator of G-protein signaling) proteins exhibit conserved biochemical but differential transcriptional regulation of heterotrimeric G-protein signaling in Brassica species. |
| Q67213170 | Duplication history and molecular evolution of the rbcS multigene family in angiosperms |
| Q37207914 | Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population. |
| Q60909344 | Evolution and Expression Divergence of the CYP78A Subfamily Genes in Soybean |
| Q50420356 | Evolution and Stress Responses of Gossypium hirsutum SWEET Genes |
| Q39021030 | Evolution and structural diversification of Nictaba-like lectin genes in food crops with a focus on soybean (Glycine max). |
| Q42121757 | Evolution of Gene Expression Balance Among Homeologs of Natural Polyploids |
| Q34060855 | Evolution of physiological responses to salt stress in hexaploid wheat |
| Q47585207 | Evolution of the Aux/IAA Gene Family in Hexaploid Wheat |
| Q38475267 | Evolution of the BBAA component of bread wheat during its history at the allohexaploid level |
| Q57532051 | Evolutionarily conserved partial gene duplication in the Triticeae tribe of grasses confers pathogen resistance |
| Q48054445 | Evolutionary and Functional Analysis of Membrane-Bound NAC Transcription Factor Genes in Soybean |
| Q41276536 | Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean |
| Q36265305 | Expansion and stress responses of the AP2/EREBP superfamily in cotton |
| Q35775820 | Extensive Analysis of GmFTL and GmCOL Expression in Northern Soybean Cultivars in Field Conditions |
| Q64981422 | Fine-Tuning the Expression of Duplicate Genes by Translational Regulation in Arabidopsis and Maize. |
| Q50495828 | Functional conservation and divergence of GmCHLI genes in polyploid soybean. |
| Q33984567 | Functional innovations of three chronological mesohexaploid Brassica rapa genomes |
| Q46269607 | Gene expression differs in codominant prairie grasses under drought. |
| Q33752756 | Gene-body CG methylation and divergent expression of duplicate genes in rice |
| Q42648407 | Genome rearrangements derived from homoeologous recombination following allopolyploidy speciation in coffee |
| Q37277395 | Genome-Wide Gene/Genome Dosage Imbalance Regulates Gene Expressions in Synthetic Brassica napus and Derivatives (AC, AAC, CCA, CCAA). |
| Q35154687 | Genome-wide analysis of homeobox gene family in legumes: identification, gene duplication and expression profiling |
| Q42121646 | Genome-wide annotation and characterization of CLAVATA/ESR (CLE) peptide hormones of soybean (Glycine max) and common bean (Phaseolus vulgaris), and their orthologues of Arabidopsis thaliana. |
| Q90611314 | Genome-wide characterization and expression analysis of soybean trihelix gene family |
| Q34701176 | Genome-wide expression analysis of soybean MADS genes showing potential function in the seed development. |
| Q58802488 | Genome-wide identification and analysis of the ALTERNATIVE OXIDASE gene family in diploid and hexaploid wheat |
| Q35219067 | Genome-wide identification of evolutionarily conserved alternative splicing events in flowering plants |
| Q36210427 | Genome-wide survey and comprehensive expression profiling of Aux/IAA gene family in chickpea and soybean |
| Q35106454 | Genomic survey, gene expression analysis and structural modeling suggest diverse roles of DNA methyltransferases in legumes. |
| Q57092959 | Genomic, molecular evolution, and expression analysis of NOX genes in soybean (Glycine max) |
| Q46893760 | GhAGL15s, preferentially expressed during somatic embryogenesis, promote embryogenic callus formation in cotton (Gossypium hirsutum L.). |
| Q46912463 | Global dissection of alternative splicing in paleopolyploid soybean |
| Q57431332 | Heterosis and Genetic Variance in Soybean Recombinant Inbred Line Populations |
| Q88646343 | Highly preserved roles of Brassica MIR172 in polyploid Brassicas: ectopic expression of variants of Brassica MIR172 accelerates floral transition |
| Q89999329 | Homeologs of Brassica SOC1, a central regulator of flowering time, are differentially regulated due to partitioning of evolutionarily conserved transcription factor binding sites in promoters |
| Q47130754 | Homoeologous Recombination of the V1r1-V1r2 Gene Cluster of Pheromone Receptors in an Allotetraploid Lineage of Teleosts. |
| Q55446430 | Hybridity has a greater effect than paternal genome dosage on heterosis in sugar beet (Beta vulgaris). |
| Q60934886 | Identification and Characterization of the Gene Family in Polyploid Wheat and Related Species |
| Q42422646 | Identification and characterization of large DNA deletions affecting oil quality traits in soybean seeds through transcriptome sequencing analysis |
| Q46477729 | Identification and functional characterization of silicon transporters in soybean using comparative genomics of major intrinsic proteins in Arabidopsis and rice |
| Q48338535 | Identification of Homogentisate Dioxygenase as a Target for Vitamin E Biofortification in Oilseeds. |
| Q47749598 | Identification, characterisation and molecular modelling of two AP endonucleases from base excision repair pathway in sugarcane provide insights on the early evolution of green plants |
| Q60557494 | Immediate vs. evolutionary consequences of polyploidy on clonal reproduction in an autopolyploid plant |
| Q65002465 | In silico genome-wide identification and comprehensive characterization of the BES1 gene family in soybean. |
| Q37025079 | Independent and Parallel Evolution of New Genes by Gene Duplication in Two Origins of C4 Photosynthesis Provides New Insight into the Mechanism of Phloem Loading in C4 Species |
| Q38793458 | Insights into the Ecology and Evolution of Polyploid Plants through Network Analysis |
| Q46059074 | Insights into the Prunus-Specific S-RNase-Based Self-Incompatibility System from a Genome-Wide Analysis of the Evolutionary Radiation of S Locus-Related F-box Genes |
| Q41503555 | Karyotype and gene order evolution from reconstructed extinct ancestors highlight contrasts in genome plasticity of modern rosid crops |
| Q35653862 | Large-Scale Evolutionary Analysis of Genes and Supergene Clusters from Terpenoid Modular Pathways Provides Insights into Metabolic Diversification in Flowering Plants |
| Q41760774 | MYB31/MYB42 Syntelogs Exhibit Divergent Regulation of Phenylpropanoid Genes in Maize, Sorghum and Rice |
| Q47554575 | Mapping and Identifying a Candidate Gene (Bnmfs) for Female-Male Sterility through Whole-Genome Resequencing and RNA-Seq in Rapeseed (Brassica napus L.). |
| Q36305714 | Mechanism-Based Post-Translational Modification and Inactivation in Terpene Synthases |
| Q37512758 | Metabolic and Transcriptional Reprogramming in Developing Soybean (Glycine max) Embryos |
| Q28600888 | MicroRNA Maturation and MicroRNA Target Gene Expression Regulation Are Severely Disrupted in Soybean dicer-like1 Double Mutants |
| Q36735194 | Microsomal Omega-3 Fatty Acid Desaturase Genes in Low Linolenic Acid Soybean Line RG10 and Validation of Major Linolenic Acid QTL |
| Q43760431 | Molecular characterization of Als1, an acetohydroxyacid synthase mutation conferring resistance to sulfonylurea herbicides in soybean |
| Q46543457 | Morphological Convergence Between an Allopolyploid and One of its Parental Species Correlates with Biased Gene Expression and DNA Loss. |
| Q35496794 | New insights into the evolutionary history of plant sorbitol dehydrogenase |
| Q36750091 | Origin and genome evolution of polyploid green toads in Central Asia: evidence from microsatellite markers |
| Q36847270 | Overexpression of the Transcription Factors GmSHN1 and GmSHN9 Differentially Regulates Wax and Cutin Biosynthesis, Alters Cuticle Properties, and Changes Leaf Phenotypes in Arabidopsis |
| Q38238098 | Parasitic success without sex – the nematode experience |
| Q46253271 | Patterns and Consequences of Subgenome Differentiation Provide Insights into the Nature of Paleopolyploidy in Plants. |
| Q38415587 | Proteomic analysis of the soybean symbiosome identifies new symbiotic proteins |
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