PAML 4: phylogenetic analysis by maximum likelihood

scientific article (publication date: August 2007)

PAML 4: phylogenetic analysis by maximum likelihood is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/MOLBEV/MSM088
P3181OpenCitations bibliographic resource ID137567
P698PubMed publication ID17483113
P5875ResearchGate publication ID6348494

P2093author name stringZiheng Yang
P433issue8
P921main subjectphylogeneticsQ171184
P304page(s)1586-91
P577publication date2007-08-01
P1433published inMolecular Biology and EvolutionQ1992656
P1476titlePAML 4: phylogenetic analysis by maximum likelihood
P478volume24

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Q45101773Alignment errors strongly impact likelihood-based tests for comparing topologies
Q53278386Alignment modulates ancestral sequence reconstruction accuracy.
Q38695928Alignment-free inference of hierarchical and reticulate phylogenomic relationships.
Q36055315All 37 Mitochondrial Genes of Aphid Aphis craccivora Obtained from Transcriptome Sequencing: Implications for the Evolution of Aphids
Q95300548Allele-aware chromosome-level genome assembly and efficient transgene-free genome editing for the autotetraploid cultivated alfalfa
Q90440345Allele-specific nonstationarity in evolution of influenza A virus surface proteins
Q111629129Allopatric divergence and regional range expansion of Juniperus sabina in China
Q47246215Allopolyploid origin of highly invasive Centaurea stoebe s.l. (Asteraceae).
Q35863144Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy
Q60761608Alternative Splicing of the Delta-Opioid Receptor Gene Suggests Existence of New Functional Isoforms
Q59489578Alternative reproductive tactics and sex-biased gene expression: the study of the bulb mite transcriptome
Q55090212Amino acid compositions contribute to the proteins' evolution under the influence of their abundances and genomic GC content.
Q91995641Amino acid exchangeabilities vary across the tree of life
Q46434906An African Origin of the Eurylaimides (Passeriformes) and the Successful Diversification of the Ground-Foraging Pittas (Pittidae).
Q46286524An Evaluation of Different Partitioning Strategies for Bayesian Estimation of Species Divergence Times
Q47133467An Important Role for Purifying Selection in Archaeal Genome Evolution.
Q64241394An Insect Counteradaptation against Host Plant Defenses Evolved through Concerted Neofunctionalization
Q37254448An Intronless β-amyrin Synthase Gene is More Efficient in Oleanolic Acid Accumulation than its Paralog in Gentiana straminea
Q28597572An LTR Retrotransposon-Derived Gene Displays Lineage-Specific Structural and Putative Species-Specific Functional Variations in Eutherians
Q28602857An RNA-dependent RNA polymerase gene in bat genomes derived from an ancient negative-strand RNA virus
Q35935895An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.).
Q33355169An amphioxus orthologue of the estrogen receptor that does not bind estradiol: insights into estrogen receptor evolution
Q28730815An ancient genomic regulatory block conserved across bilaterians and its dismantling in tetrapods by retrogene replacement
Q51201666An artifact caused by undersampling optimal trees in supermatrix analyses of locally sampled characters.
Q27684465An atomic-resolution view of neofunctionalization in the evolution of apicomplexan lactate dehydrogenases
Q47353020An effector-targeted protease contributes to defense against Phytophthora infestans and is under diversifying selection in natural hosts.
Q89600864An efficient RNA-seq-based segregation analysis identifies the sex chromosomes of Cannabis sativa
Q34882043An endemic frog harbors multiple expression loci with different patterns of variation in the MHC class II B gene
Q37000525An epigenetic antimalarial resistance mechanism involving parasite genes linked to nutrient uptake
Q33595617An evaluation of phylogenetic informativeness profiles and the molecular phylogeny of diplazontinae (Hymenoptera, Ichneumonidae).
Q35133190An evolutionary analysis of antigen processing and presentation across different timescales reveals pervasive selection
Q33395835An evolutionary and structural characterization of mammalian protein complex organization
Q46160378An evolutionary genome scan for longevity-related natural selection in mammals
Q28661395An evolutionary screen highlights canonical and noncanonical candidate antiviral genes within the primate TRIM gene family
Q56828434An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations
Q37216261An expanded clade of rodent Trim5 genes
Q46141019An expansion of age constraints for microbial clades that lack a conventional fossil record using phylogenomic dating
Q64060985An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape
Q59337088An improved genome assembly for reveals hepcidin gene expansion with diversified regulation and function
Q43936048An improved likelihood ratio test for detecting site-specific functional divergence among clades of protein-coding genes
Q92327642An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi)
Q59793446An integrated omics analysis reveals molecular mechanisms that are associated with differences in seed oil content between Glycine max and Brassica napus
Q92280074An integrative phylogenomic approach illuminates the evolutionary history of Old World tree frogs (Anura: Rhacophoridae)
Q92963914An integrative phylogenomic approach illuminates the evolutionary history of cockroaches and termites (Blattodea)
Q35618307An original phylogenetic approach identified mitochondrial haplogroup T1a1 as inversely associated with breast cancer risk in BRCA2 mutation carriers
Q28752634An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants
Q57026593An underground burst of diversity - a new look at the phylogeny and taxonomy of the genusTalpaLinnaeus, 1758 (Mammalia: Talpidae) as revealed by nuclear and mitochondrial genes
Q59349981An upstream protein-coding region in enteroviruses modulates virus infection in gut epithelial cells
Q33988951Analyses of 32 loci clarify phylogenetic relationships among Trypanosoma cruzi lineages and support a single hybridization prior to human contact
Q34491821Analyses of expressed sequence tags in Neurospora reveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi
Q34369947Analyses of nuclearly encoded mitochondrial genes suggest gene duplication as a mechanism for resolving intralocus sexually antagonistic conflict in Drosophila
Q35791561Analysis of Arabidopsis genome-wide variations before and after meiosis and meiotic recombination by resequencing Landsberg erecta and all four products of a single meiosis
Q28729873Analysis of C3 suggests three periods of positive selection events and different evolutionary patterns between fish and mammals
Q33753976Analysis of Drosophila TRPA1 reveals an ancient origin for human chemical nociception.
Q36070793Analysis of Genetic Variation across the Encapsidated Genome of Microplitis demolitor Bracovirus in Parasitoid Wasps
Q98465781Analysis of Natural Selection of Immune Genes in Spinibarbus caldwelli by Transcriptome Sequencing
Q46286607Analysis of Phylogenomic Tree Space Resolves Relationships Among Marsupial Families.
Q50917214Analysis of a rare functional truncating mutation rs61757459 in vaspin (SERPINA12) on circulating vaspin levels.
Q58569939Analysis of bHLH genes from foxtail millet (Setaria italica) and their potential relevance to drought stress
Q28728594Analysis of complete nucleotide sequences of 12 Gossypium chloroplast genomes: origin and evolution of allotetraploids
Q33860365Analysis of host-parasite incongruence in papillomavirus evolution using importance sampling
Q34174184Analysis of hypoxia-inducible factor alpha polyploidization reveals adaptation to Tibetan Plateau in the evolution of schizothoracine fish
Q46639265Analysis of mitochondrial genome diversity identifies new and ancient maternal lineages in Cambodian aborigines
Q98891725Analysis of muntjac deer genome and chromatin architecture reveals rapid karyotype evolution
Q90887606Analysis of new retrogenes provides insight into dog adaptive evolution
Q43593536Analysis of polymorphism and transcription of the effector gene Avr1b in Phytophthora sojae isolates from China virulent to Rps1b.
Q35147686Analysis of prostate-specific antigen transcripts in chimpanzees, cynomolgus monkeys, baboons, and African green monkeys.
Q44498519Analysis of recombination and natural selection in human enterovirus 71.
Q91610799Analysis of substitution rates showed that TLR5 is evolving at different rates among mammalian groups
Q30834605Analysis of the FGF gene family provides insights into aquatic adaptation in cetaceans
Q64053354Analysis of the coding sequences of clownfish reveals molecular convergence in the evolution of lifespan
Q35180371Analysis of the complete mitochondrial genome of Pochonia chlamydosporia suggests a close relationship to the invertebrate-pathogenic fungi in Hypocreales
Q35894470Analysis of the erythropoietin of a Tibetan Plateau schizothoracine fish (Gymnocypris dobula) reveals enhanced cytoprotection function in hypoxic environments
Q40206564Analysis of the genetic diversity of ovine herpesvirus 2 in samples from livestock with malignant catarrhal fever.
Q44163783Analysis of the leader proteinase (L(pro)) region of type A foot-and-mouth disease virus with due emphasis on phylogeny and evolution of the emerging VP3(59)-deletion lineage from India
Q31157416Analysis of the population structure of Anaplasma phagocytophilum using multilocus sequence typing
Q90759165Analyzing the functional divergence of Slo1 and Slo3 channel subfamilies
Q41516129Ancestor of land plants acquired the DNA-3-methyladenine glycosylase (MAG) gene from bacteria through horizontal gene transfer.
Q35675368Ancestral Chromatin Configuration Constrains Chromatin Evolution on Differentiating Sex Chromosomes in Drosophila
Q50911929Ancestral Haloalkane Dehalogenases Show Robustness and Unique Substrate Specificity.
Q50674806Ancestral Protein Reconstruction and Circular Permutation for Improving the Stability and Dynamic Range of FRET Sensors.
Q28596371Ancestral Reconstruction
Q35787321Ancestral capture of syncytin-Car1, a fusogenic endogenous retroviral envelope gene involved in placentation and conserved in Carnivora
Q34380746Ancestral polymorphism at the major histocompatibility complex (MHCIIß) in the Nesospiza bunting species complex and its sister species (Rowettia goughensis).
Q46306295Ancestral resurrection of anthropoid estrogen receptor β demonstrates functional consequences of positive selection.
Q110697335Ancestral sequence reconstruction of ancient lipase from family I.3 bacterial lipolytic enzymes
Q99616771Ancestral sequence reconstruction produces thermally stable enzymes with mesophilic enzyme-like catalytic properties
Q92229907Ancestral-sequence reconstruction unveils the structural basis of function in mammalian FMOs
Q58337704Anchored Hybrid Enrichment-Based Phylogenomics of Leafhoppers and Treehoppers (Hemiptera: Cicadomorpha: Membracoidea)
Q30385499Ancient Duplications Have Led to Functional Divergence of Vitellogenin-Like Genes Potentially Involved in Inflammation and Oxidative Stress in Honey Bees
Q34668592Ancient Origin and Recent Innovations of RNA Polymerase IV and V.
Q42581794Ancient Origin of Chaperonin Gene Paralogs Involved in Ciliopathies
Q33556686Ancient and recent selective pressures shaped genetic diversity at AIM2-like nucleic acid sensors.
Q21091000Ancient antimicrobial peptides kill antibiotic-resistant pathogens: Australian mammals provide new options
Q89991977Ancient co-retention of paralogs of Cid centromeric histones and Cal1 chaperones in mosquito species
Q59485930Ancient convergent losses of Paraoxonase 1 yield potential risks for modern marine mammals
Q59357571Ancient evolutionary origin and positive selection of the retroviral restriction factor in muroid rodents
Q34394762Ancient expansion of the hox cluster in lepidoptera generated four homeobox genes implicated in extra-embryonic tissue formation
Q35129297Ancient gene duplication provided a key molecular step for anaerobic growth of Baker's yeast
Q35532485Ancient horizontal transfer of transaldolase-like protein gene and its role in plant vascular development
Q57288463Ancient mechanisms for the evolution of the bicoid homeodomain's function in fly development
Q90282241Ancient mtDNA from the extinct Indian cheetah supports unexpectedly deep divergence from African cheetahs
Q37428428Ancient origins of vertebrate-specific innate antiviral immunity
Q34626411Ancient orphan crop joins modern era: gene-based SNP discovery and mapping in lentil
Q33591519Angiosperm genome comparisons reveal early polyploidy in the monocot lineage
Q64100890Angiosperm-Wide and Family-Level Analyses of / Genes Reveal Differential Retention and Sequence Divergence After Whole-Genome Duplication
Q34689337Animal mitochondria, positive selection and cyto-nuclear coevolution: insights from pulmonates
Q57147613Anisogamy evolved with a reduced sex-determining region in volvocine green algae
Q56886401Annonaceae substitution rates: a codon model perspective
Q33529117Anopheles immune genes and amino acid sites evolving under the effect of positive selection
Q28474724Antagonistic changes in sensitivity to antifungal drugs by mutations of an important ABC transporter gene in a fungal pathogen
Q40227488Antagonistic evolution of an antibiotic and its molecular chaperone: how to maintain a vital ectosymbiosis in a highly fluctuating habitat.
Q91907705Antarctic blackfin icefish genome reveals adaptations to extreme environments
Q35999500Antennal RNA-sequencing analysis reveals evolutionary aspects of chemosensory proteins in the carpenter ant, Camponotus japonicus
Q35030612Antennal transcriptome profiles of anopheline mosquitoes reveal human host olfactory specialization in Anopheles gambiae
Q90318229Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts
Q33601920Antigenic and genetic evolution of low-pathogenicity avian influenza viruses of subtype H7N3 following heterologous vaccination
Q36023942Antimicrobial Functions of Lactoferrin Promote Genetic Conflicts in Ancient Primates and Modern Humans
Q28595639Application of RNA-seq for mitogenome reconstruction, and reconsideration of long-branch artifacts in Hemiptera phylogeny
Q35182532Application of community phylogenetic approaches to understand gene expression: differential exploration of venom gene space in predatory marine gastropods
Q58582379Appropriate Assignment of Fossil Calibration Information Minimizes the Difference between Phylogenetic and Pedigree Mutation Rates in Humans
Q44948496Approximate likelihood calculation on a phylogeny for Bayesian estimation of divergence times
Q35869925Arabidopsis Cell Division Cycle 20.1 Is Required for Normal Meiotic Spindle Assembly and Chromosome Segregation.
Q36801829Are Convergent and Parallel Amino Acid Substitutions in Protein Evolution More Prevalent Than Neutral Expectations?
Q42398473Are Human Translated Pseudogenes Functional?
Q46655956Are Synonymous Substitutions in Flowering Plant Mitochondria Neutral?
Q36035025Are orphan genes protein-coding, prediction artifacts, or non-coding RNAs?
Q33744400Are substitution rates and RNA editing correlated?
Q21134907Armadillo 1.1: an original workflow platform for designing and conducting phylogenetic analysis and simulations
Q49595627Arms race of temporal partitioning between carnivorous and herbivorous mammals.
Q33583664Arrival and diversification of mabuyine skinks (Squamata: Scincidae) in the Neotropics based on a fossil-calibrated timetree
Q34512311Arrival of Paleo-Indians to the southern cone of South America: new clues from mitogenomes
Q35624883Arsenic rich Himalayan hot spring metagenomics reveal genetically novel predator-prey genotypes
Q93370861As Blind as a Bat? Opsin Phylogenetics Illuminates the Evolution of Color Vision in Bats
Q38414261Assembly of an evolutionarily new pathway for α-pyrone biosynthesis in Arabidopsis.
Q35242849Assessing associations between the AURKA-HMMR-TPX2-TUBG1 functional module and breast cancer risk in BRCA1/2 mutation carriers
Q33356601Assessing duplication and loss of APETALA1/FRUITFULL homologs in Ranunculales
Q28601923Assessing models of speciation under different biogeographic scenarios; an empirical study using multi-locus and RNA-seq analyses
Q59138004Assessing the Performance of Ks Plots for Detecting Ancient Whole Genome Duplications
Q28751162Assessing the genomic evidence for conserved transcribed pseudogenes under selection
Q28660123Assignment of Calibration Information to Deeper Phylogenetic Nodes is More Effective in Obtaining Precise and Accurate Divergence Time Estimates
Q46048864Association and evolutionary studies of the melatonin receptor 1B gene (MTNR1B) in the self-contained population of Sorbs from Germany
Q43893168Association between genomic heterogeneity of hepatitis B virus and intrauterine infection
Q33924790Association of intron loss with high mutation rate in Arabidopsis: implications for genome size evolution
Q46782698Assortative mating drives linkage disequilibrium between sperm and egg recognition protein loci in the sea urchin Strongylocentrotus purpuratus.
Q35765101Asymmetric Context-Dependent Mutation Patterns Revealed through Mutation-Accumulation Experiments
Q34142138Asymmetric and non-uniform evolution of recently duplicated human genes
Q44826041Asymmetric functional divergence of young, dispersed gene duplicates in Arabidopsis thaliana
Q83225728Asymmetrical diversification of the receptor-ligand interaction controlling self-incompatibility in Arabidopsis
Q33538087Atlantic cod piscidin and its diversification through positive selection
Q92325639Atlas of group A streptococcal vaccine candidates compiled using large-scale comparative genomics
Q35028345Atractaspis aterrima toxins: the first insight into the molecular evolution of venom in side-stabbers
Q39051864Atypical Protein Phosphatase 2A Gene Families Do Not Expand via Paleopolyploidization
Q119704586Australia’s hidden radiation: Phylogenomics analysis reveals rapid Miocene radiation of blindsnakes
Q57214653Authentication of Herbal Medicines and Using DNA Barcodes, Chloroplast Genome, and Sequence Characterized Amplified Region (SCAR) Marker
Q93170760AutoMLST: an automated web server for generating multi-locus species trees highlighting natural product potential
Q24633559Auxin response factor gene family in Brassica rapa: genomic organization, divergence, expression, and evolution
Q37696469AvrPm2 encodes an RNase-like avirulence effector which is conserved in the two different specialized forms of wheat and rye powdery mildew fungus
Q89693801Baby genomics: tracing the evolutionary changes that gave rise to placentation
Q33791214Back to the sea twice: identifying candidate plant genes for molecular evolution to marine life
Q33811797Background selection as baseline for nucleotide variation across the Drosophila genome
Q34557144Bacterial colonization and succession in a newly opened hospital.
Q37335459Bacterial intra-species gene loss occurs in a largely clocklike manner mostly within a pool of less conserved and constrained genes
Q40080922Baculovirus molecular evolution via gene turnover and recurrent positive selection of key genes.
Q30557269Baiji genomes reveal low genetic variability and new insights into secondary aquatic adaptations
Q34452823Balancing selection and genetic drift at major histocompatibility complex class II genes in isolated populations of golden snub-nosed monkey (Rhinopithecus roxellana).
Q28604136Balancing selection and recombination as evolutionary forces caused population genetic variations in golden pheasant MHC class I genes
Q41886370Base composition, selection, and phylogenetic significance of indels in the recombination activating gene-1 in vertebrates
Q51888987Basic Molecular Evolution Workshop--A trans-African virtual training course: "Virtual Workshops": Is Africa ready to embrace the concept?
Q92173264Bat adeno-associated viruses as gene therapy vectors with the potential to evade human neutralizing antibodies
Q64112083Bayesian Detection of Convergent Rate Changes of Conserved Noncoding Elements on Phylogenetic Trees
Q47262525Bayesian dating of shallow phylogenies with a relaxed clock.
Q41123113Bayesian estimation of nonsynonymous/synonymous rate ratios for pairwise sequence comparisons
Q38674782Bayesian molecular clock dating of species divergences in the genomics era.
Q41784345Bayesian phylogeny of sucrose transporters: ancient origins, differential expansion and convergent evolution in monocots and dicots.
Q28749030Bayesian random local clocks, or one rate to rule them all
Q46408804Bayesian relaxed clock estimation of divergence times in foraminifera
Q37300402Benign Rabbit Caliciviruses Exhibit Evolutionary Dynamics Similar to Those of Their Virulent Relatives
Q46126247Beta-keratins of turtle shell are glycine-proline-tyrosine rich proteins similar to those of crocodilians and birds
Q28685602Beyond reasonable doubt: evolution from DNA sequences
Q30986845BiDiBlast: comparative genomics pipeline for the PC.
Q102059103Biallelic variants in HPDL, encoding 4-hydroxyphenylpyruvate dioxygenase-like protein, lead to an infantile neurodegenerative condition
Q39831653Biases of tree-independent-character-subsampling methods
Q35927979Binding interface change and cryptic variation in the evolution of protein-protein interactions.
Q31117981Bio++: efficient extensible libraries and tools for computational molecular evolution.
Q27496491Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython
Q28601625Biochemical characterization of predicted Precambrian RuBisCO
Q28608324Biogeographic history and high-elevation adaptations inferred from the mitochondrial genome of Glyptosternoid fishes (Sisoridae, Siluriformes) from the southeastern Tibetan Plateau
Q38368734Bioinformatic Analyses of Whole-Genome Sequence Data in a Public Health Laboratory
Q35808594Bioinformatics-Aided Venomics
Q64924534Biological Processes Modulating Longevity across Primates: A Phylogenetic Genome-Phenome Analysis.
Q56395008Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
Q35204371Biophysical fitness landscapes for transcription factor binding sites
Q39549189Birt Hogg-Dubé syndrome-associated FLCN mutations disrupt protein stability
Q59352239Birth and death of Mx genes and the presence/absence of genes regulating Mx transcription are correlated with the diversity of anti-pathogenicity in vertebrate species
Q53250688Birth, death and horizontal transfer of the fumonisin biosynthetic gene cluster during the evolutionary diversification of Fusarium.
Q35919908Birth, death, and replacement of karyopherins in Drosophila
Q64911065Birth-and-Death Evolution of the Fatty Acyl-CoA Reductase (FAR) Gene Family and Diversification of Cuticular Hydrocarbon Synthesis in Drosophila.
Q42691232Birth-and-death of KLK3 and KLK2 in primates: evolution driven by reproductive biology
Q36092531Body mass-corrected molecular rate for bird mitochondrial DNA.
Q28602600Bone-associated gene evolution and the origin of flight in birds
Q60919605Both Intrinsically Disordered Regions and Structural Domains Evolve Rapidly in Immune-Related Mammalian Proteins
Q30398026Both Maintenance and Avoidance of RNA-Binding Protein Interactions Constrain Coding Sequence Evolution
Q28584521Both Male-Biased and Female-Biased Genes Evolve Faster in Fish Genomes
Q36243324Both mechanism and age of duplications contribute to biased gene retention patterns in plants
Q118162826BrRxLR11 – a new phylogenetic marker with high resolution in the downy mildew genus Bremia and related genera
Q30448467Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome.
Q30399739Bringing order to protein disorder through comparative genomics and genetic interactions
Q59789403Building an octaploid genome and transcriptome of the medicinal plant Pogostemon cablin from Lamiales
Q56975259Building trees of algae: some advances in phylogenetic and evolutionary analysis
Q33569824Burrowers from the past: mitochondrial signatures of Ordovician bivalve infaunalization
Q64115389Bursts of amino acid replacements in protein evolution
Q35848765Buying in to bioinformatics: an introduction to commercial sequence analysis software.
Q47254760C(4) eudicots are not younger than C(4) monocots
Q36393060COMPASS: The COMPletely Arbitrary Sequence Simulator
Q92824153CRL4-Cereblon complex in Thalidomide Embryopathy: a translational investigation
Q28650035Calibration uncertainty in molecular dating analyses: there is no substitute for the prior evaluation of time priors
Q39604668Camelid genomes reveal evolution and adaptation to desert environments
Q92872578Can Green Algal Plastid Genome Size Be Explained by DNA Repair Mechanisms?
Q90101969Can extreme MHC class I diversity be a feature of a wide geographic range? The example of Seba's short-tailed bat (Carollia perspicillata)
Q36215630Canine distemper virus in the Serengeti ecosystem: molecular adaptation to different carnivore species
Q41718969Capsid coding region diversity of re-emerging lineage C foot-and-mouth disease virus serotype Asia1 from India.
Q33900336Capture of syncytin-Mar1, a fusogenic endogenous retroviral envelope gene involved in placentation in the Rodentia squirrel-related clade
Q36653923Captured retroviral envelope syncytin gene associated with the unique placental structure of higher ruminants
Q46941832Cardamine hirsuta: a versatile genetic system for comparative studies.
Q30830482Cardiac myoglobin deficit has evolved repeatedly in teleost fishes
Q34669657Cardinal characters on a slippery slope--a re-evaluation of phylogeny, character evolution, and evolutionary rates in the jelly lichens (Collemataceae s. str).
Q34980301Carving out turf in a biodiversity hotspot: multiple, previously unrecognized shrew species co-occur on Java Island, Indonesia.
Q28589525Catalysis and Structure of Zebrafish Urate Oxidase Provide Insights into the Origin of Hyperuricemia in Hominoids
Q103804462Cattle mitogenome variation reveals a post-glacial expansion of haplogroup P and an early incorporation into northeast Asian domestic herds
Q35702375Causes and consequences of genome expansion in fungi
Q37738686Causes and consequences of rapidly evolving mtDNA in a plant lineage
Q30855591Causes and evolutionary consequences of primordial germ-cell specification mode in metazoans
Q26771275Causes of evolutionary rate variation among protein sites
Q59357143Cell-Derived Viral Genes Evolve under Stronger Purifying Selection in Rhadinoviruses
Q37257612CenH3 evolution reflects meiotic symmetry as predicted by the centromere drive model.
Q51144970Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia).
Q36485079Centromere retention and loss during the descent of maize from a tetraploid ancestor
Q35765130Centromeres Off the Hook: Massive Changes in Centromere Size and Structure Following Duplication of CenH3 Gene in Fabeae Species
Q49461101Ceratocystis cacaofunesta genome analysis reveals a large expansion of extracellular phosphatidylinositol-specific phospholipase-C genes (PI-PLC).
Q89584460Cetacea are natural knockouts for IL20
Q28651049Cetaceans evolution: insights from the genome sequences of common minke whales
Q28757616Chaetognath transcriptome reveals ancestral and unique features among bilaterians
Q39032310Challenges in Species Tree Estimation Under the Multispecies Coalescent Model
Q92260714Challenges in funding and developing genomic software: roots and remedies
Q62486506Challenges of next-generation sequencing in conservation management: Insights from long-term monitoring of corridor effects on the genetic diversity of mouse lemurs in a fragmented landscape
Q42108069Chance and necessity in the genome evolution of endosymbiotic bacteria of insects
Q33883670Change of positive selection pressure on HIV-1 envelope gene inferred by early and recent samples
Q48065805Changes in Hox genes' structure and function during the evolution of the squamate body plan
Q36071293Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae.
Q28748272Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes
Q42069125Chaperonin-dependent accelerated substitution rates in prokaryotes
Q64892099Characterisation of major histocompatibility complex class IIa haplotypes in an island sheep population.
Q30385688Characteristic amino acid changes of influenza A(H1N1)pdm09 virus PA protein enhance A(H7N9) viral polymerase activity.
Q98177826Characteristics and Mutational Hotspots of Plastomes in Debregeasia (Urticaceae)
Q33838341Characteristics and expression patterns of the aldehyde dehydrogenase (ALDH) gene superfamily of foxtail millet (Setaria italica L.).
Q43954038Characteristics and significance of intergenic polyadenylated RNA transcription in Arabidopsis
Q38458907Characteristics of Plant Essential Genes Allow for within- and between-Species Prediction of Lethal Mutant Phenotypes
Q34269638Characterization and 454 pyrosequencing of major histocompatibility complex class I genes in the great tit reveal complexity in a passerine system
Q57073027Characterization and Expression Patterns of Auxin Response Factors in Wheat
Q46747776Characterization and evolutionary analysis of tributyltin-binding protein and pufferfish saxitoxin and tetrodotoxin-binding protein genes in toxic and nontoxic pufferfishes
Q27318359Characterization and evolutionary implications of the triad Asp-Xxx-Glu in group II phosphopantetheinyl transferases
Q96303724Characterization of Burkholderia cepacia Complex Core Genome and the Underlying Recombination and Positive Selection
Q31151468Characterization of CYCLOIDEA-like genes in Proteaceae, a basal eudicot family with multiple shifts in floral symmetry
Q50277352Characterization of MHC class I and II genes in a subantarctic seabird, the blue petrel, Halobaena caerulea (Procellariiformes).
Q34512002Characterization of MHC class I in a long-distance migrant shorebird suggests multiple transcribed genes and intergenic recombination.
Q39301740Characterization of MHC class II B polymorphism in bottlenecked New Zealand saddlebacks reveals low levels of genetic diversity.
Q33619325Characterization of S3Pvac anti-cysticercosis vaccine components: implications for the development of an anti-cestodiasis vaccine
Q41587100Characterization of VP1 gene of coxsackievirus A16 prevalent among hand foot mouth disease suffered children in Taizhou, P. R. China, between 2010 and 2013.
Q112305736Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition
Q90511974Characterization of a Saccharum spontaneum with a basic chromosome number of x = 10 provides new insights on genome evolution in genus Saccharum
Q27346921Characterization of a Single Genomic Locus Encoding the Clustered Protocadherin Receptor Diversity in Xenopus tropicalis.
Q90324319Characterization of a large sex determination region in Salix purpurea L. (Salicaceae)
Q37383299Characterization of a male reproductive transcriptome for Peromyscus eremicus (Cactus mouse).
Q59330316Characterization of a novel N-acylhomoserine lactonase, AidP, from Antarctic Planococcus sp
Q34637752Characterization of an ancient lepidopteran lateral gene transfer
Q28709549Characterization of hairless (Hr) and FGF5 genes provides insights into the molecular basis of hair loss in cetaceans
Q40074390Characterization of major histocompatibility complex class I, and class II DRB loci of captive and wild Indian leopards (Panthera pardus fusca).
Q27319430Characterization of multiple sequence alignment errors using complete-likelihood score and position-shift map
Q91510932Characterization of porcine tripartite motif genes as host restriction factors against PRRSV and PEDV infection
Q28656415Characterization of red-capped mangabey tetherin: implication for the co-evolution of primates and their lentiviruses
Q92313504Characterization of the Complete Chloroplast Genome of Acer truncatum Bunge (Sapindales: Aceraceae): A New Woody Oil Tree Species Producing Nervonic Acid
Q90194683Characterization of the Complete Mitochondrial Genome of Harpalus sinicus and Its Implications for Phylogenetic Analyses
Q28651688Characterization of the avian Trojan gene family reveals contrasting evolutionary constraints
Q57493951Characterization of the complete mitochondrial genome of Xi et al., 2018 (Cestoda, Caryophyllidea)
Q41538879Characterization of the duplicate L-SIGN and DC-SIGN genes in miiuy croaker and evolutionary analysis of L-SIGN in fishes
Q28661544Characterization of the heart transcriptome of the white shark (Carcharodon carcharias)
Q34013755Characterization of the major histocompatibility complex class II genes in miiuy croaker
Q92962393Characterization of the melanopsin gene (Opn4x) of diurnal and nocturnal snakes
Q64116291Characterization of the mitochondrial genome of an ancient amphipod Halice sp. MT-2017 (Pardaliscidae) from 10,908 m in the Mariana Trench
Q93199650Characterization of the mitochondrial genomes of two toads, Anaxyrus americanus (Anura: Bufonidae) and Bufotes pewzowi (Anura: Bufonidae), with phylogenetic and selection pressure analyses
Q38430313Characterization of the peripheral blood transcriptome and adaptive evolution of the MHC I and TLR gene families in the wolf (Canis lupus).
Q51745874Characterization of the sperm molecule bindin in the sea urchin genus Paracentrotus.
Q34440981Characterization of the transcriptome, nucleotide sequence polymorphism, and natural selection in the desert adapted mouse Peromyscus eremicus
Q28650841Characterization of the uncertainty of divergence time estimation under relaxed molecular clock models using multiple loci
Q35825327Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast
Q30396719Charting the host adaptation of influenza viruses
Q46403850Chasing ghosts: allopolyploid origin of Oxyria sinensis (Polygonaceae) from its only diploid congener and an unknown ancestor
Q90477505Chenopodium ficifolium flowers under long days without upregulation of FLOWERING LOCUS T (FT) homologs
Q55000435Chitinase genes (CHIAs) provide genomic footprints of a post-Cretaceous dietary radiation in placental mammals.
Q90193830Chloroplast Genomes and Comparative Analyses among Thirteen Taxa within Myrsinaceae s.str. Clade (Myrsinoideae, Primulaceae)
Q111629784Chloroplast genomes of key species shed light on the evolution of the ancient genus Isoetes
Q50662838Choosing BLAST options for better detection of orthologs as reciprocal best hits.
Q46284149Chromosomal Context Affects the Molecular Evolution of Sex-linked Genes and Their Autosomal Counterparts in Turtles and Other Vertebrates
Q34961982Chromosomal copy number variation, selection and uneven rates of recombination reveal cryptic genome diversity linked to pathogenicity.
Q33722055Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome
Q89891698Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
Q97883718Chromosome Level Genome Assembly of Andrographis paniculata
Q90207895Chromosome-level assembly of the mustache toad genome using third-generation DNA sequencing and Hi-C analysis
Q100736962Chromosome-level genome assembly of a parent species of widely cultivated azaleas
Q57159344Chromosome-level reference genome and alternative splicing atlas of moso bamboo (Phyllostachys edulis)
Q94595222Chromosome-scale assembly of the Kandelia obovata genome
Q104802892Chromosome-scale genome assembly provides insights into the evolution and flavor synthesis of passion fruit (Passiflora edulis Sims)
Q28710318Chronology of deep nodes in the neotropical primate phylogeny: insights from mitochondrial genomes
Q43076646Circadian input kinases and their homologs in cyanobacteria: evolutionary constraints versus architectural diversification
Q36461418Circulation of influenza B lineages in northern Viet Nam, 2007-2014.
Q41371417Cis-Regulatory Divergence in Gene Expression between Two Thermally Divergent Yeast Species
Q46573655Clade-specific positive selection on a developmental gene: BRANCHLESS TRICHOME and the evolution of stellate trichomes in Physaria (Brassicaceae).
Q48506094Cladogenesis and Genomic Streamlining in Extracellular Endosymbionts of Tropical Stink bugs.
Q44221689Class of multiple sequence alignment algorithm affects genomic analysis
Q56673023Climate-driven range shifts of the king penguin in a fragmented ecosystem
Q33967926Climbing the vertebrate branch of U1A/U2B″ protein evolution
Q35455573Clinical application of whole-genome sequencing to inform treatment for multidrug-resistant tuberculosis cases
Q28652901Clock model makes a large difference to age estimates of long-stemmed clades with no internal calibration: a test using Australian grasstrees
Q36290581Clonal Dissemination of Enterobacter cloacae Harboring blaKPC-3 in the Upper Midwestern United States
Q38861866Clonal relationship between human and avian ciprofloxacin-resistant Escherichia coli isolates in North-Eastern Algeria
Q33982609Cloning and characterisation of multiple ferritin isoforms in the Atlantic salmon (Salmo salar).
Q84325691Cloning and characterization of boron transporters in Brassica napus
Q30390203Cloning and characterization of wnt4a gene and evidence for positive selection in half-smooth tongue sole (Cynoglossus semilaevis).
Q50516675Cloning and expression analysis of an anti-lipopolysaccharide factor from giant freshwater prawn, Macrobrachium rosenbergii.
Q51548227Cloning and molecular evolution of the aldehyde dehydrogenase 2 gene (Aldh2) in bats (Chiroptera).
Q50551548Cloning, expression of, and evidence of positive selection for, the prolactin receptor gene in Chinese giant salamander (Andrias davidianus).
Q40827783Cloning, sequencing, and polymorphism analysis of novel classical MHC class I alleles in northern pig-tailed macaques (Macaca leonina).
Q33851402Clues to evolution of the SERA multigene family in 18 Plasmodium species
Q60915452Cluster expansion of apolipoprotein D (ApoD) genes in teleost fishes
Q34659294Clustering evolving proteins into homologous families
Q28603872Co-dispersal of the blood fluke Schistosoma japonicum and Homo sapiens in the Neolithic Age
Q28534758Co-evolution of Human Leukocyte Antigen (HLA) Class I Ligands with Killer-Cell Immunoglobulin-Like Receptors (KIR) in a Genetically Diverse Population of Sub-Saharan Africans
Q46512187Co-evolution of SNF spliceosomal proteins with their RNA targets in trans-splicing nematodes
Q30416610Co-evolution of primate SAMHD1 and lentivirus Vpx leads to the loss of the vpx gene in HIV-1 ancestor
Q34365634Co-evolution of transcriptional silencing proteins and the DNA elements specifying their assembly
Q90578211Co-expression clustering across flower development identifies modules for diverse floral forms in Achimenes (Gesneriaceae)
Q36183031Co-expression network analysis of duplicate genes in maize (Zea mays L.) reveals no subgenome bias
Q47208292Co-expression of soybean Dicer-like genes in response to stress and development
Q55395333Co-speciation in bedbug Wolbachia parallel the pattern in nematode hosts.
Q84230531Co-variation among major classes of LRR-encoding genes in two pairs of plant species
Q33688850Coalescent simulation of intracodon recombination
Q94590251Coding potential and sequence conservation of SARS-CoV-2 and related animal viruses
Q37409271Codon 104 variation of p53 gene provides adaptive apoptotic responses to extreme environments in mammals of the Tibet plateau
Q39999890Codon Usage Selection Can Bias Estimation of the Fraction of Adaptive Amino Acid Fixations.
Q36245830Codon and Amino Acid Usage Are Shaped by Selection Across Divergent Model Organisms of the Pancrustacea
Q34665129Codon pairs of the HIV-1 vif gene correlate with CD4+ T cell count
Q50082036Codon usage variation of Zika virus: The potential roles of NS2B and NS4A in its global pandemic.
Q91724379Codon use and aversion is largely phylogenetically conserved across the tree of life
Q33932964Codon-by-codon modulation of translational speed and accuracy via mRNA folding.
Q36830858CodonPhyML: fast maximum likelihood phylogeny estimation under codon substitution models.
Q41931187Codons support the maintenance of intrinsic DNA polymer flexibility over evolutionary timescales
Q41890755Coestimation of recombination, substitution and molecular adaptation rates by approximate Bayesian computation
Q35849187Coev-web: a web platform designed to simulate and evaluate coevolving positions along a phylogenetic tree
Q36775434Coevolution between Nuclear-Encoded DNA Replication, Recombination, and Repair Genes and Plastid Genome Complexity
Q42006136Coevolution in RNA molecules driven by selective constraints: evidence from 5S rRNA.
Q41693755Coevolution of URAT1 and Uricase during Primate Evolution: Implications for Serum Urate Homeostasis and Gout
Q34028838Coevolution of amino acid residues in the key photosynthetic enzyme Rubisco
Q33572801Coevolution of axon guidance molecule Slit and its receptor Robo
Q33486468Coevolution of interacting fertilization proteins
Q46913907Coevolution of positively selected IZUMO1 and CD9 in rodents: evidence of interaction between gamete fusion proteins?
Q36245641Coevolutionary dynamics between tribe Cercopithecini tetherins and their lentiviruses.
Q90145752Coexpression network revealing the plasticity and robustness of population transcriptome during the initial stage of domesticating energy crop Miscanthus lutarioriparius
Q28589825Cognitive Function Related to the Sirh11/Zcchc16 Gene Acquired from an LTR Retrotransposon in Eutherians
Q96022750Cold climate adaptation is a plausible cause for evolution of multicellular sporulation in Dictyostelia
Q28648435Collembolan Transcriptomes Highlight Molecular Evolution of Hexapods and Provide Clues on the Adaptation to Terrestrial Life
Q90134476Colletotrichum shisoi sp. nov., an anthracnose pathogen of Perilla frutescens in Japan: molecular phylogenetic, morphological and genomic evidence
Q24621695Collodictyon--an ancient lineage in the tree of eukaryotes
Q34334316Colon cancer associated genes exhibit signatures of positive selection at functionally significant positions
Q41896733Combination of immune and viral factors distinguishes low-risk versus high-risk HIV-1 disease progression in HLA-B*5701 subjects
Q40575939Combinatorial DNA Rearrangement Facilitates the Origin of New Genes in Ciliates
Q28744365Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation
Q30665739Combining fossil and molecular data to date the diversification of New World Primates
Q37594687Combining molecular evolution and environmental genomics to unravel adaptive processes of MHC class IIB diversity in European minnows (Phoxinus phoxinus)
Q28681243Combining phylogenetic and syntenic analyses for understanding the evolution of TCP ECE genes in eudicots
Q41884762Comment on "The Molecular Evolutionary Patterns of the Insulin/FOXO Signaling Pathway".
Q92295462Common Variants in the Glycerol Kinase Gene Reduce Tuberculosis Drug Efficacy
Q38667737Common and phylogenetically widespread coding for peptides by bacterial small RNAs
Q95616063Comparative ACE2 variation and primate COVID-19 risk
Q101038877Comparative ACE2 variation and primate COVID-19 risk
Q58691929Comparative Analyses of Chloroplast Genomes of Cucurbitaceae Species: Lights into Selective Pressures and Phylogenetic Relationships
Q38916453Comparative Analyses of Selection Operating on Nontranslated Intergenic Regions of Diverse Bacterial Species.
Q37592657Comparative Analysis of Six Lagerstroemia Complete Chloroplast Genomes.
Q33690018Comparative Analysis of Transcriptomes in Rhizophoraceae Provides Insights into the Origin and Adaptive Evolution of Mangrove Plants in Intertidal Environments
Q89186588Comparative Analysis of the Chloroplast Genomes of the Chinese Endemic Genus Urophysa and Their Contribution to Chloroplast Phylogeny and Adaptive Evolution
Q33608529Comparative Analysis of the Complete Chloroplast Genome of Four Endangered Herbals of Notopterygium
Q46251846Comparative Analysis of the Complete Chloroplast Genome of Four Known Ziziphus Species
Q37043063Comparative Analysis of the Complete Chloroplast Genomes of Five Quercus Species
Q42372811Comparative Analysis of the Complete Plastomes of Apostasia wallichii and Neuwiedia singapureana (Apostasioideae) Reveals Different Evolutionary Dynamics of IR/SSC Boundary among Photosynthetic Orchids
Q89434366Comparative Chloroplast Genome Analyses of Species in Gentiana section Cruciata (Gentianaceae) and the Development of Authentication Markers
Q39716212Comparative Chloroplast Genome Analyses of Streptophyte Green Algae Uncover Major Structural Alterations in the Klebsormidiophyceae, Coleochaetophyceae and Zygnematophyceae
Q91639157Comparative Chloroplast Genomics at Low Taxonomic Levels: A Case Study Using Amphilophium (Bignonieae, Bignoniaceae)
Q35926447Comparative Evolution of Duplicated Ddx3 Genes in Teleosts: Insights from Japanese Flounder, Paralichthys olivaceus
Q93387142Comparative Genome Analysis and Evaluation of Probiotic Characteristics of Lactobacillus plantarum Strain JDFM LP11
Q61798706Comparative Genomic Analyses Reveal Core-Genome-Wide Genes Under Positive Selection and Major Regulatory Hubs in Outlier Strains of Pseudomonas aeruginosa
Q37297969Comparative Genomic Analysis among Four Representative Isolates of Phytophthora sojae Reveals Genes under Evolutionary Selection
Q93030557Comparative Genomic Analysis of Trichinella spiralis Reveals Potential Mechanisms of Adaptive Evolution
Q90294988Comparative Genomic Analysis of the Pheromone Receptor Class 1 Family (V1R) Reveals Extreme Complexity in Mouse Lemurs (Genus, Microcebus) and a Chromosomal Hotspot across Mammals
Q37306373Comparative Genomics Analysis of Rice and Pineapple Contributes to Understand the Chromosome Number Reduction and Genomic Changes in Grasses
Q64097826Comparative Genomics Between and Applied to Identify Mechanisms Involved in Adaptation
Q92794736Comparative Genomics Identifies Putative Signatures of Sociality in Spiders
Q35757822Comparative Genomics Including the Early-Diverging Smut Fungus Ceraceosorus bombacis Reveals Signatures of Parallel Evolution within Plant and Animal Pathogens of Fungi and Oomycetes
Q49558433Comparative Genomics Reveals Accelerated Evolution in Conserved Pathways during the Diversification of Anole Lizards.
Q92539646Comparative Genomics Reveals Accelerated Evolution of Fright Reaction Genes in Ostariophysan Fishes
Q64058391Comparative Genomics Reveals the Genetic Mechanisms of Musk Secretion and Adaptive Immunity in Chinese Forest Musk Deer
Q64247288Comparative Genomics Reveals the High Copy Number Variation of a Retro Transposon in Different Isolates
Q26314585Comparative Genomics Uncovers Unique Gene Turnover and Evolutionary Rates in a Gene Family Involved in the Detection of Insect Cuticular Pheromones
Q47249202Comparative Genomics in Drosophila
Q41440455Comparative Genomics of Burkholderia singularis sp. nov., a Low G+C Content, Free-Living Bacterium That Defies Taxonomic Dissection of the Genus Burkholderia
Q58556896Comparative Genomics of S and L Morphotypes Yield Insights into Niche Adaptation
Q52313193Comparative Genomics of Smut Pathogens: Insights From Orphans and Positively Selected Genes Into Host Specialization.
Q36983148Comparative Genomics of Two Closely Related Wolbachia with Different Reproductive Effects on Hosts
Q93054099Comparative Genomics of Wild Bee and Flower Isolated Lactobacillus Reveals Potential Adaptation to the Bee Host
Q36440371Comparative Genomics of an Emerging Amphibian Virus
Q28830518Comparative Genomics of the Sigatoka Disease Complex on Banana Suggests a Link between Parallel Evolutionary Changes in Pseudocercospora fijiensis and Pseudocercospora eumusae and Increased Virulence on the Banana Host
Q28596339Comparative Large-Scale Mitogenomics Evidences Clade-Specific Evolutionary Trends in Mitochondrial DNAs of Bivalvia
Q35973555Comparative Phylodynamics of Rabbit Hemorrhagic Disease Virus in Australia and New Zealand
Q36273081Comparative Phylogenomic Assessment of Mitochondrial Introgression among Several Species of Chipmunks (Tamias)
Q92548409Comparative Plastid Genomics of Cryptomonas Species Reveals Fine-Scale Genomic Responses to Loss of Photosynthesis
Q28730817Comparative RNA sequencing reveals substantial genetic variation in endangered primates
Q35091254Comparative RNAi screens in C. elegans and C. briggsae reveal the impact of developmental system drift on gene function
Q33698622Comparative Sperm Proteomics in Mouse Species with Divergent Mating Systems
Q91972025Comparative Transcriptome Analysis Reveals Molecular Basis Underlying Fast Growth of the Selectively Bred Pacific Oyster, Crassostrea gigas
Q89495320Comparative Transcriptome Profiling of the Loaches Triplophysa bleekeri and Triplophysa rosa Reveals Potential Mechanisms of Eye Degeneration
Q57817627Comparative Transcriptomic Analysis of Two Actinorhizal Plants and the Legume Supports the Homology of Root Nodule Symbioses and Is Congruent With a Two-Step Process of Evolution in the Nitrogen-Fixing Clade of Angiosperms
Q51146264Comparative Transcriptomics Among Four White Pine Species.
Q90095615Comparative Transcriptomics Provides Insights into Reticulate and Adaptive Evolution of a Butterfly Radiation
Q52558715Comparative Transcriptomics and Genomic Patterns of Discordance in Capsiceae (Solanaceae).
Q36233142Comparative Transcriptomics of Strawberries (Fragaria spp.) Provides Insights into Evolutionary Patterns
Q42672749Comparative Vertebrate Evolutionary Analyses of Type I Collagen: Potential of COL1a1 Gene Structure and Intron Variation for Common Bone-Related Diseases
Q64239166Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise
Q35548157Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes
Q46245808Comparative analyses of plastid genomes from fourteen Cornales species: inferences for phylogenetic relationships and genome evolution.
Q33633423Comparative analyses of the Conserved Oligomeric Golgi (COG) complex in vertebrates
Q44756511Comparative analysis between homoeologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence
Q47318519Comparative analysis of Gossypium and Vitis genomes indicates genome duplication specific to the Gossypium lineage
Q34209393Comparative analysis of Mycobacterium and related Actinomycetes yields insight into the evolution of Mycobacterium tuberculosis pathogenesis
Q36269729Comparative analysis of NBS-LRR genes and their response to Aspergillus flavus in Arachis
Q89769045Comparative analysis of chloroplast genomes for five Dicliptera species (Acanthaceae): molecular structure, phylogenetic relationships, and adaptive evolution
Q91718295Comparative analysis of corrected tiger genome provides clues to its neuronal evolution
Q47270291Comparative analysis of evolutionary dynamics of genes encoding leucine-rich repeat receptor-like kinase between rice and Arabidopsis
Q47142651Comparative analysis of inverted repeats of polypod fern (Polypodiales) plastomes reveals two hypervariable regions.
Q34540705Comparative analysis of kabuli chickpea transcriptome with desi and wild chickpea provides a rich resource for development of functional markers
Q41853704Comparative analysis of mammalian Y chromosomes illuminates ancestral structure and lineage-specific evolution
Q33714068Comparative analysis of nuclear tRNA genes of Nasonia vitripennis and other arthropods, and relationships to codon usage bias
Q42407141Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives.
Q33628150Comparative analysis of secreted protein evolution using expressed sequence tags from four poplar leaf rusts (Melampsora spp.).
Q57295862Comparative analysis of selection mode reveals different evolutionary rate and expression pattern in Arachis duranensis and Arachis ipaënsis duplicated genes
Q59203365Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat
Q111349027Comparative analysis of testis transcriptomes in laboratory cohorts of recently diverged allopatric Drosophila nasuta nasuta and Drosophila nasuta albomicans
Q89713399Comparative analysis of the P-type ATPase gene family in seven Rosaceae species and an expression analysis in pear (Pyrus bretschneideri Rehd.).
Q34447196Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication
Q38474512Comparative analysis of the radish genome based on a conserved ortholog set (COS) of Brassica.
Q37073033Comparative and evolutionary genomics of globin genes in fish
Q88442960Comparative chloroplast genomics between the invasive weed Mikania micrantha and its indigenous congener Mikania cordata: Structure variation, identification of highly divergent regions, divergence time estimation, and phylogenetic analysis
Q45366299Comparative complete genome analysis of Indian type A foot-and-mouth disease virus field isolates
Q53062417Comparative gene evolution in haemosporidian (apicomplexa) parasites of birds and mammals.
Q58698269Comparative genome analyses reveal sequence features reflecting distinct modes of host-adaptation between dicot and monocot powdery mildew
Q35934798Comparative genome analysis and genome evolution of members of the magnaporthaceae family of fungi
Q50074916Comparative genome and transcriptome analyses reveal adaptations to opportunistic infections in woody plant degrading pathogens of Botryosphaeriaceae.
Q118162932Comparative genome and transcriptome analysis reveal the medicinal basis and environmental adaptation of artificially cultivated Taiwanofungus camphoratus
Q99613916Comparative genomic analyses illuminate the distinct evolution of megabats within Chiroptera
Q35775316Comparative genomic analyses of freshly isolated Giardia intestinalis assemblage A isolates
Q50120487Comparative genomic analyses reveal the features for adaptation to nematodes in fungi.
Q53077639Comparative genomic analysis of Lactobacillus plantarum GB-LP4 and identification of evolutionarily divergent genes in high-osmolarity environment.
Q38819225Comparative genomic analysis of SET domain family reveals the origin, expansion, and putative function of the arthropod-specific SmydA genes as histone modifiers in insects
Q27335503Comparative genomic analysis of retrogene repertoire in two green algae Volvox carteri and Chlamydomonas reinhardtii
Q93060732Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
Q34851417Comparative genomic analysis of teleost fish bmal genes.
Q34665756Comparative genomic analysis of the Streptococcus dysgalactiae species group: gene content, molecular adaptation, and promoter evolution
Q30664052Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice
Q33692261Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013.
Q49776792Comparative genomic analysis reveals the evolution and environmental adaptation strategies of vibrios.
Q37317927Comparative genomic and population genetic analyses indicate highly porous genomes and high levels of gene flow between divergent helianthus species
Q35067318Comparative genomic data of the Avian Phylogenomics Project
Q90671793Comparative genomic investigation of high-elevation adaptation in ectothermic snakes
Q50467590Comparative genomic organization and tissue-specific transcription of the duplicated fabp7 and fabp10 genes in teleost fishes.
Q35867031Comparative genomics Lactobacillus reuteri from sourdough reveals adaptation of an intestinal symbiont to food fermentations
Q90164211Comparative genomics analysis of c-di-GMP metabolism and regulation in Microcystis aeruginosa
Q34310619Comparative genomics and evolution of the alpha-defensin multigene family in primates
Q41205126Comparative genomics and phylogenetic discordance of cultivated tomato and close wild relatives
Q64101036Comparative genomics and transcriptomics analysis reveals evolution patterns of selection in the Salix phylogeny
Q28655824Comparative genomics and transcriptomics in ants provide new insights into the evolution and function of odorant binding and chemosensory proteins
Q58760482Comparative genomics and transcriptomics of Chrysolophus provide insights into the evolution of complex plumage coloration
Q33998296Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species
Q35465170Comparative genomics in the Asteraceae reveals little evidence for parallel evolutionary change in invasive taxa
Q99710906Comparative genomics of Alexander Fleming's original Penicillium isolate (IMI 15378) reveals sequence divergence of penicillin synthesis genes
Q28704917Comparative genomics of Blattabacterium cuenoti: the frozen legacy of an ancient endosymbiont genome
Q35273109Comparative genomics of Esx genes from clinical isolates of Mycobacterium tuberculosis provides evidence for gene conversion and epitope variation
Q36266064Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi clade
Q34671940Comparative genomics of Wolbachia and the bacterial species concept
Q46236426Comparative genomics of an unusual biogeographic disjunction in the cotton tribe (Gossypieae) yields insights into genome downsizing
Q34474862Comparative genomics of bacteria in the genus Providencia isolated from wild Drosophila melanogaster
Q30365464Comparative genomics of canine-isolated Leishmania (Leishmania) amazonensis from an endemic focus of visceral leishmaniasis in Governador Valadares, southeastern Brazil.
Q47229749Comparative genomics of chemosensory protein genes (CSPs) in twenty-two mosquito species (Diptera: Culicidae): Identification, characterization, and evolution
Q40786593Comparative genomics of chemosensory protein genes reveals rapid evolution and positive selection in ant-specific duplicates
Q21266666Comparative genomics of emerging pathogens in the Candida glabrata clade
Q35555385Comparative genomics of grass EST libraries reveals previously uncharacterized splicing events in crop plants
Q44845313Comparative genomics of mammalian hibernators using gene networks.
Q37105964Comparative genomics of mutualistic viruses of Glyptapanteles parasitic wasps
Q34622109Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation
Q46251971Comparative genomics of pathogenic and non-pathogenic beetle-vectored fungi in the genus Geosmithia
Q30855343Comparative genomics of planktonic Flavobacteriaceae from the Gulf of Maine using metagenomic data
Q28478477Comparative genomics of the anopheline glutathione S-transferase epsilon cluster
Q21090491Comparative genomics of the apicomplexan parasites Toxoplasma gondii and Neospora caninum: Coccidia differing in host range and transmission strategy
Q21266694Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens
Q46171521Comparative genomics of the pine pathogens and beetle symbionts in the genus Grosmannia
Q35286224Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum
Q34866432Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal
Q35164823Comparative genomics of xylose-fermenting fungi for enhanced biofuel production
Q36231088Comparative genomics provides a timeframe for Wolbachia evolution and exposes a recent biotin synthesis operon transfer
Q64921800Comparative genomics provides new insights into the remarkable adaptations of the African wild dog (Lycaon pictus).
Q28598366Comparative genomics reveals adaptive evolution of Asian tapeworm in switching to a new intermediate host
Q39016128Comparative genomics reveals convergent evolution between the bamboo-eating giant and red pandas.
Q36112052Comparative genomics reveals convergent rates of evolution in ant-plant mutualisms
Q28650043Comparative genomics reveals insights into avian genome evolution and adaptation
Q64258395Comparative genomics sheds light on the predatory lifestyle of accipitrids and owls
Q38486098Comparative genomics suggests that an ancestral polyploidy event leads to enhanced root nodule symbiosis in the Papilionoideae.
Q33987415Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens
Q28660874Comparative inner ear transcriptome analysis between the Rickett's big-footed bats (Myotis ricketti) and the greater short-nosed fruit bats (Cynopterus sphinx).
Q46776315Comparative interrogation of the developing xylem transcriptomes of two wood-forming species: Populus trichocarpa and Eucalyptus grandis
Q33471287Comparative metagenomic analysis of a microbial community residing at a depth of 4,000 meters at station ALOHA in the North Pacific subtropical gyre
Q96961156Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny
Q37074303Comparative mitochondrial genomics within and among species of killifish
Q34462333Comparative mitochondrial genomics within and among yeast species of the Lachancea genus
Q36286644Comparative mitogenomics indicates respiratory competence in parasitic Viscum despite loss of complex I and extreme sequence divergence, and reveals horizontal gene transfer and remarkable variation in genome size
Q111629564Comparative plastid genomics of Pinus species: Insights into sequence variations and phylogenetic relationships
Q47239102Comparative population genomics in Collinsia sister species reveals evidence for reduced effective population size, relaxed selection, and evolution of biased gene conversion with an ongoing mating system shift
Q47793749Comparative population genomics of the ejaculate in humans and the great apes
Q30383372Comparative sequence analyses of rhodopsin and RPE65 reveal patterns of selective constraint across hereditary retinal disease mutations.
Q34491196Comparative sequence analysis of the Ghd7 orthologous regions revealed movement of Ghd7 in the grass genomes
Q92134518Comparative structural and evolutionary analyses predict functional sites in the artemisinin resistance malaria protein K13
Q36315212Comparative transcriptome analyses of flower development in four species of Achimenes (Gesneriaceae).
Q28601381Comparative transcriptome analyses of seven anurans reveal functions and adaptations of amphibian skin
Q35213609Comparative transcriptome analyses on silk glands of six silkmoths imply the genetic basis of silk structure and coloration
Q30301080Comparative transcriptome analyses reveal core parasitism genes and suggest gene duplication and repurposing as sources of structural novelty.
Q38368053Comparative transcriptome analysis and identification of candidate effectors in two related rust species (Gymnosporangium yamadae and Gymnosporangium asiaticum).
Q28688519Comparative transcriptome analysis and marker development of two closely related Primrose species (Primula poissonii and Primula wilsonii)
Q28657694Comparative transcriptome analysis of eggplant (Solanum melongena L.) and turkey berry (Solanum torvum Sw.): phylogenomics and disease resistance analysis
Q55333761Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion.
Q35317169Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation.
Q35268761Comparative transcriptome resources of eleven Primulina species, a group of 'stone plants' from a biodiversity hot spot
Q50285185Comparative transcriptome reveal the potential adaptive evolutionary genes in Andrias davidianus.
Q46247359Comparative transcriptomic analysis of Tibetan Gynaephora to explore the genetic basis of insect adaptation to divergent altitude environments
Q35648724Comparative transcriptomic analysis revealed adaptation mechanism of Phrynocephalus erythrurus, the highest altitude Lizard living in the Qinghai-Tibet Plateau
Q35943370Comparative transcriptomics and proteomics of three different aphid species identifies core and diverse effector sets.
Q60936066Comparative transcriptomics identifies patterns of selection in roses
Q92282150Comparative transcriptomics of 3 high-altitude passerine birds and their low-altitude relatives
Q35811399Comparative transcriptomics of Eastern African cichlid fishes shows signs of positive selection and a large contribution of untranslated regions to genetic diversity
Q36335799Comparative transcriptomics of Entelegyne spiders (Araneae, Entelegynae), with emphasis on molecular evolution of orphan genes
Q36263368Comparative transcriptomics of elasmobranchs and teleosts highlight important processes in adaptive immunity and regional endothermy
Q64083708Comparative transcriptomics of sympatric species of coral reef fishes (genus: )
Q36244550Comparative transcriptomics provide insight into the morphogenesis and evolution of fistular leaves in Allium.
Q58802437Comparative transcriptomics provides insight into the molecular basis of species diversification of section Trigonopedia (Cypripedium) on the Qinghai-Tibetan Plateau
Q46480461Comparative transcriptomics reveal host-specific nucleotide variation in entomophthoralean fungi
Q36657352Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants
Q92406594Comparative transcriptomics reveals the selection patterns of domesticated ramie
Q33927257Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks
Q89885305Comparison of Arachis monticola with Diploid and Cultivated Tetraploid Genomes Reveals Asymmetric Subgenome Evolution and Improvement of Peanut
Q28596354Comparison of a Modern and Fossil Pithovirus Reveals Its Genetic Conservation and Evolution
Q28596639Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly
Q38678322Comparison of different strategies for using fossil calibrations to generate the time prior in Bayesian molecular clock dating
Q34261807Comparison of genotypes I and III in Japanese encephalitis virus reveals distinct differences in their genetic and host diversity
Q28744564Comparison of homoeolocus organisation in paired BAC clones from white clover (Trifolium repens L.) and microcolinearity with model legume species
Q54962715Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution.
Q34342017Compensatory evolution of net-charge in influenza A virus hemagglutinin
Q85968993Compensatory mutations occur within the electrostatic interaction range of deleterious mutations in protein structure
Q33580127Competition between Phytophthora infestans effectors leads to increased aggressiveness on plants containing broad-spectrum late blight resistance
Q83509035Competitive oxidation and ubiquitylation on the evolutionarily conserved cysteine confer tissue-specific stabilization of Insig-2
Q33862313Complete Chloroplast Genome Sequence of Coptis chinensis Franch. and Its Evolutionary History.
Q38601566Complete Chloroplast Genome Sequence of Decaisnea insignis: Genome Organization, Genomic Resources and Comparative Analysis
Q64088586Complete Chloroplast Genomes and Comparative Analysis of Sequences Evolution among Seven (Aristolochiaceae) Medicinal Species
Q90724102Complete Chloroplast Genomes of Ampelopsis humulifolia and Ampelopsis japonica: Molecular Structure, Comparative Analysis, and Phylogenetic Analysis
Q35943231Complete Plastid Genome of the Recent Holoparasite Lathraea squamaria Reveals Earliest Stages of Plastome Reduction in Orobanchaceae.
Q52676491Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals.
Q64060672Complete chloroplast genome of Camellia japonica genome structures, comparative and phylogenetic analysis
Q35035851Complete chloroplast genome of Sedum sarmentosum and chloroplast genome evolution in Saxifragales
Q58770795Complete chloroplast genome sequence of Fagopyrum dibotrys: genome features, comparative analysis and phylogenetic relationships
Q47767430Complete genome analysis of Lactobacillus fermentum SK152 from kimchi reveals genes associated with its antimicrobial activity.
Q33526331Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042
Q42644059Complete genome sequence of an Argentinean isolate of Solenopsis invicta virus 3.
Q39187300Complete mitochondrial genome and evolutionary analysis of Turritopsis dohrnii, the "immortal" jellyfish with a reversible life-cycle
Q60048678Complete mitochondrial genome of Benthodytes marianensis (Holothuroidea: Elasipodida: Psychropotidae): Insight into deep sea adaptation in the sea cucumber
Q64902174Complete mitochondrial genomes of eight seahorses and pipefishes (Syngnathiformes: Syngnathidae): insight into the adaptive radiation of syngnathid fishes.
Q28596925Complete mitochondrial genomes of living and extinct pigeons revise the timing of the columbiform radiation
Q90066734Complete mtDNA genome of Otus sunia (Aves, Strigidae) and the relaxation of selective constrains on Strigiformes mtDNA following evolution
Q35085675Complete plastome sequence of Thalictrum coreanum (Ranunculaceae) and transfer of the rpl32 gene to the nucleus in the ancestor of the subfamily Thalictroideae
Q33445410Complete sequence determination of a novel reptile iridovirus isolated from soft-shelled turtle and evolutionary analysis of Iridoviridae
Q21135580Complete sequencing and pan-genomic analysis of Lactobacillus delbrueckii subsp. bulgaricus reveal its genetic basis for industrial yogurt production
Q34549835Completion of the Chloroplast Genomes of Five Chinese Juglans and Their Contribution to Chloroplast Phylogeny
Q33590771Complex Evolutionary History of the Mammalian Histone H1.1-H1.5 Gene Family
Q37521835Complex Patterns of Association between Pleiotropy and Transcription Factor Evolution.
Q33952201Complex deleterious interactions associated with malic enzyme may contribute to reproductive isolation in the copepod Tigriopus californicus
Q28479019Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility
Q51617102Complex evolutionary transitions and the significance of c(3)-c(4) intermediate forms of photosynthesis in Molluginaceae.
Q31028671Complex interplay of evolutionary forces in the ladybird homeobox genes of Drosophila melanogaster
Q30528935Complex patterns of divergence among green-sensitive (RH2a) African cichlid opsins revealed by Clade model analyses
Q45088573Complex positive selection pressures drive the evolution of HIV-1 with different co-receptor tropisms.
Q41139836Comprehensive Analysis of Codon Usage Bias in Seven Epichloë Species and Their Peramine-Coding Genes.
Q35845225Comprehensive Analysis of a Yeast Lipase Family in the Yarrowia Clade
Q89578375Comprehensive Profiling of Tubby-Like Protein Expression Uncovers Ripening-Related TLP Genes in Tomato (Solanum lycopersicum)
Q37534487Comprehensive Transcriptome Analysis Provides Evidence of Local Thermal Adaptation in Three Loaches (Genus: Misgurnus).
Q35840471Comprehensive Transcriptome Analysis of Six Catfish Species from an Altitude Gradient Reveals Adaptive Evolution in Tibetan Fishes
Q64923598Comprehensive analysis of NAC transcription factors uncovers their roles during fiber development and stress response in cotton.
Q43522759Comprehensive analysis of correlations among codon usage bias, gene expression, and substitution rate in Arachis duranensis and Arachis ipaënsis orthologs
Q28661795Comprehensive analysis of expressed sequence tags from cultivated and wild radish (Raphanus spp.)
Q34111221Comprehensive analysis of tandem amino acid repeats from ten angiosperm genomes
Q33565500Comprehensive bioinformatics analysis of Mycoplasma pneumoniae genomes to investigate underlying population structure and type-specific determinants
Q99608935Comprehensive genomic analysis reveals dynamic evolution of endogenous retroviruses that code for retroviral-like protein domains
Q21132676Comprehensive phylogenetic reconstructions of African swine fever virus: proposal for a new classification and molecular dating of the virus
Q104076063Comprehensive phylogeny of Myrmecocystus honey ants highlights cryptic diversity and infers evolution during aridification of the American Southwest
Q57128858Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data
Q111629662Comprehensive transcriptome analyses of two Oocystis algae provide insights into the adaptation to Qinghai–Tibet Plateau
Q35047556Comprehensive transcriptome analysis reveals accelerated genic evolution in a Tibet fish, Gymnodiptychus pachycheilus
Q36301167Comprehensive transcriptomic analysis of Tibetan Schizothoracinae fish Gymnocypris przewalskii reveals how it adapts to a high altitude aquatic life
Q64994296Computational Characterization of the mtORF of Pocilloporid Corals: Insights into Protein Structure and Function in Stylophora Lineages from Contrasting Environments.
Q36305692Computational Identification of Amino-Acid Mutations that Further Improve the Activity of a Chalcone-Flavonone Isomerase from Glycine max
Q40073359Computational Methods for Predicting Effectors in Rust Pathogens
Q31137725Computational analyses of an evolutionary arms race between mammalian immunity mediated by immunoglobulin A and its subversion by bacterial pathogens.
Q28710416Computational analysis and characterization of UCE-like elements (ULEs) in plant genomes
Q64110130Computational analysis of the evolutionarily conserved Missing In Metastasis/Metastasis Suppressor 1 gene predicts novel interactions, regulatory regions and transcriptional control
Q38442739Computational analysis of the glutamate receptor gene family of Arabidopsis thaliana.
Q41948034Computational analysis suggests that lyssavirus glycoprotein gene plays a minor role in viral adaptation
Q28478221Computational and biochemical analysis of the Xanthomonas effector AvrBs2 and its role in the modulation of Xanthomonas type three effector delivery
Q30429273Computational evolutionary analysis of the overlapped surface (S) and polymerase (P) region in hepatitis B virus indicates the spacer domain in P is crucial for survival
Q48247773Computational prediction of the phenotypic effects of genetic variants: basic concepts and some application examples in Drosophila nervous system genes.
Q36085083Computational studies of human class V alcohol dehydrogenase - the odd sibling
Q33541016Computational study of evolutionary selection pressure on rainbow trout estrogen receptors
Q56879918ConSurf: Using Evolutionary Data to Raise Testable Hypotheses about Protein Function
Q46374791Concerted Divergence after Gene Duplication in Polycomb Repressive Complexes.
Q30393522Concomitant emergence of the antisense protein gene of HIV-1 and of the pandemic.
Q38930163Concomitant loss of NDH complex-related genes within chloroplast and nuclear genomes in some orchids
Q89208011Concurrent Duplication of Drosophila Cid and Cenp-C Genes Resulted in Accelerated Evolution and Male Germline-Biased Expression of the New Copies
Q46020251Congruence between nuclear and mitochondrial DNA: combination of multiple nuclear introns resolves a well-supported phylogeny of New World orioles (Icterus).
Q52880811Consequences of asexuality in natural populations: insights from stick insects.
Q106700913Consequences of parallel miniaturisation in Microhylinae (Anura, Microhylidae), with the description of a new genus of diminutive South East Asian frogs
Q92169262Conservation and innovation: Plastome evolution during rapid radiation of Rhodiola on the Qinghai-Tibetan Plateau
Q90288197Conservation and novelty in the microRNA genomic landscape of hyperdiverse cichlid fishes
Q43874069Conservation and purifying selection of transcribed genes located in a rice centromere
Q36132295Conservation of Regional Variation in Sex-Specific Sex Chromosome Regulation
Q46241352Conservation of specificity in two low-specificity proteins.
Q39952292Conservation, Duplication, and Divergence of Five Opsin Genes in Insect Evolution
Q36469817Conservative and compensatory evolution in oxidative phosphorylation complexes of angiosperms with highly divergent rates of mitochondrial genome evolution
Q102060902Conserved keratin gene clusters in ancient fish: An evolutionary seed for terrestrial adaptation
Q34668559Conserved microstructure of the Brassica B Genome of Brassica nigra in relation to homologous regions of Arabidopsis thaliana, B. rapa and B. oleracea
Q30427130Conserved or lost: molecular evolution of the key gene GULO in vertebrate vitamin C biosynthesis
Q37532829Conserved proteins are fragile
Q36377995Conserved rules govern genetic interaction degree across species
Q92493641Conserved sequences identify the closest living relatives of primates
Q35053021Conserved substitution patterns around nucleosome footprints in eukaryotes and Archaea derive from frequent nucleosome repositioning through evolution
Q34137744Considerable MHC diversity suggests that the functional extinction of baiji is not related to population genetic collapse
Q28754878Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium and Theileria
Q53733940Constraining the timing of whole genome duplication in plant evolutionary history.
Q48108471Constraining uncertainty in the timescale of angiosperm evolution and the veracity of a Cretaceous Terrestrial Revolution
Q35047505Constraint and adaptation in newt toll-like receptor genes.
Q36061551Construction of a robust and sensitive arginine biosensor through ancestral protein reconstruction
Q39126061Continental monophyly of cichlid fishes and the phylogenetic position of Heterochromis multidens
Q90557669Continued Adaptation of C4 Photosynthesis After an Initial Burst of Changes in the Andropogoneae Grasses
Q92050240Contraction of the ROS Scavenging Enzyme Glutathione S-Transferase Gene Family in Cetaceans
Q28602705Contraction of the type I IFN locus and unusual constitutive expression of IFN-α in bats
Q34814768Contrasted evolutionary constraints on secreted and non-secreted proteomes of selected Actinobacteria
Q54634210Contrasted patterns of selection since maize domestication on duplicated genes encoding a starch pathway enzyme.
Q42363565Contrasting Levels of Molecular Evolution on the Mouse X Chromosome.
Q41510650Contrasting Patterns of Nucleotide Substitution Rates Provide Insight into Dynamic Evolution of Plastid and Mitochondrial Genomes of Geranium
Q64244202Contrasting Patterns of Rapid Molecular Evolution within the p53 Network across Mammal and Sauropsid Lineages
Q38883835Contrasting Rates of Molecular Evolution and Patterns of Selection among Gymnosperms and Flowering Plants
Q33916595Contrasting codon usage patterns and purifying selection at the mating locus in putatively asexual alternaria fungal species
Q42241472Contrasting evolutionary genome dynamics between domesticated and wild yeasts
Q90749052Contrasting patterns of diversification between Amazonian and Atlantic forest clades of Neotropical lianas (Amphilophium, Bignonieae) inferred from plastid genomic data
Q39996455Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus
Q46249551Contrasting patterns of evolutionary constraint and novelty revealed by comparative sperm proteomic analysis in Lepidoptera.
Q64237235Contrasting patterns of molecular evolution in metazoan germ line genes
Q44221226Contrasting patterns of selection acting on MHC class I and class II DRB genes in the Alpine marmot (Marmota marmota).
Q33663931Contrasting patterns of selective constraints in nuclear-encoded genes of the oxidative phosphorylation pathway in holometabolous insects and their possible role in hybrid breakdown in Nasonia
Q92072754Contribution of Functional Divergence Through Copy Number Variations to the Inter-Species and Intra-Species Diversity in Specialized Metabolites
Q36133560Contribution of Multiple Inter-Kingdom Horizontal Gene Transfers to Evolution and Adaptation of Amphibian-Killing Chytrid, Batrachochytrium dendrobatidis
Q41430785Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis
Q52309955Control of yeast retrotransposons mediated through nucleoporin evolution.
Q35204122Control region length dynamics potentially drives amino acid evolution in tarsier mitochondrial genomes.
Q28681759Conventional simulation of biological sequences leads to a biased assessment of multi-Loci phylogenetic analysis
Q34566268Convergence and divergence in the evolution of the APOBEC3G-Vif interaction reveal ancient origins of simian immunodeficiency viruses
Q58692363Convergent Plastome Evolution and Gene Loss in Holoparasitic Lennoaceae
Q30252741Convergent adaptation to dangerous prey proceeds through the same first-step mutation in the garter snake Thamnophis sirtalis
Q28606800Convergent capture of retroviral superantigens by mammalian herpesviruses
Q92015493Convergent degeneration of olfactory receptor gene repertoires in marine mammals
Q92761174Convergent eusocial evolution is based on a shared reproductive groundplan plus lineage-specific plastic genes
Q91038183Convergent evolution misled taxonomy in schizothoracine fishes (Cypriniformes: Cyprinidae)
Q33554338Convergent evolution of SWS2 opsin facilitates adaptive radiation of threespine stickleback into different light environments.
Q63071890Convergent evolution of bird-mammal shared characteristics for adapting to nocturnality
Q34540520Convergent evolution of caffeine in plants by co-option of exapted ancestral enzymes
Q57041182Convergent evolution of complex structures for ant-bacterial defensive symbiosis in fungus-farming ants
Q28731324Convergent evolution of escape from hepaciviral antagonism in primates
Q93146984Convergent evolution of linked mating-type loci in basidiomycete fungi
Q28607668Convergent evolution of marine mammals is associated with distinct substitutions in common genes
Q28751668Convergent evolution of metabolic roles in bacterial co-symbionts of insects
Q55282337Convergent evolution of tertiary structure in rhodopsin visual proteins from vertebrates and box jellyfish.
Q35549129Convergent evolution of the genomes of marine mammals
Q64961995Convergent genomic signatures of flight loss in birds suggest a switch of main fuel.
Q92093355Convergent horizontal gene transfer and cross-talk of mobile nucleic acids in parasitic plants
Q95831841Convergent molecular evolution among ash species resistant to the emerald ash borer
Q57139263Convergent phenotypic evolution of the visual system via different molecular routes: How Neotropical cichlid fishes adapt to novel light environments
Q91674386Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi
Q37622591Convergent recombination suppression suggests role of sexual selection in guppy sex chromosome formation.
Q47397497Convergent selection pressures drive the evolution of rhodopsin kinetics at high altitudes via nonparallel mechanisms.
Q33834930Convergently recruited nuclear transport retrogenes are male biased in expression and evolving under positive selection in Drosophila
Q47630787Coordinated Functional Divergence of Genes after Genome Duplication in Arabidopsis thaliana
Q41338193Coordinated rates of evolution between interacting plastid and nuclear genes in Geraniaceae
Q33842985Coordination of Bactericidal and Iron Regulatory Functions of Hepcidin in Innate Antimicrobial Immunity in a Zebrafish Model
Q47319055Copia retrotransposon in the Zaprionus genus: another case of transposable element sharing with the Drosophila melanogaster subgroup.
Q39751160Coregulation of tandem duplicate genes slows evolution of subfunctionalization in mammals
Q33839433Correlated evolution of nearby residues in Drosophilid proteins
Q31110939Correlated evolution of positions within mammalian cis elements.
Q36391898Correlated evolutionary rates across genomic compartments in Annonaceae.
Q35839562Correlated expression of retrocopies and parental genes in zebrafish.
Q35774460Correlates of virulence in a frog-killing fungal pathogen: evidence from a California amphibian decline
Q43989333Correlation between Ka/Ks and Ks is related to substitution model and evolutionary lineage.
Q29959614Correlation between sequence divergence and polymorphism reveals similar evolutionary mechanisms acting across multiple timescales in a rapidly evolving plastid genome
Q37461443Coupled enhancer and coding sequence evolution of a homeobox gene shaped leaf diversity.
Q35131298Coupling between protein level selection and codon usage optimization in the evolution of bacteria and archaea
Q34036225CpG site degeneration triggered by the loss of functional constraint created a highly polymorphic macaque drug-metabolizing gene, CYP1A2.
Q33675328Cross species selection scans identify components of C4 photosynthesis in the grasses.
Q28607524Cross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal Lineages
Q33759445Cross-border spread, lineage displacement and evolutionary rate estimation of rabies virus in Yunnan Province, China
Q52678288Crystal structure of an inferred ancestral bacterial pyruvate decarboxylase.
Q26740066Current analysis of host-parasite interactions with a focus on next generation sequencing data
Q92519431Cuscuta Species Identification Based on the Morphology of Reproductive Organs and Complete Chloroplast Genome Sequences
Q28604242Cyanobacteria and the Great Oxidation Event: evidence from genes and fossils
Q28602142Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton
Q46959709Cytonuclear interactions and relaxed selection accelerate sequence evolution in organelle ribosomes
Q64250370DNA Methylation Patterns in the Social Spider,
Q33313446DNA evidence for a Paleocene origin of the Alcidae (Aves: Charadriiformes) in the Pacific and multiple dispersals across northern oceans
Q47912883DNA helix: the importance of being AT-rich.
Q37725308DNA methylation and evolution of duplicate genes
Q48537696DNA methylation changes and evolution of RNA-based duplication in Sus scrofa: based on a two-step strategy.
Q36875810DNA methylation changes facilitated evolution of genes derived from Mutator-like transposable elements
Q36016937DNA polymorphism and selection at the bindin locus in three Strongylocentrotus sp. (Echinoidea).
Q39484230DOMINO: development of informative molecular markers for phylogenetic and genome-wide population genetic studies in non-model organisms
Q46243619Daily activity patterns influence retinal morphology, signatures of selection, and spectral tuning of opsin genes in colubrid snakes
Q91907897Dampened NLRP3-mediated inflammation in bats and implications for a special viral reservoir host
Q61805386Dataset on evolution analysis of splenic transcriptome in bighead carp and silver carp
Q64252186Dating Whole Genome Duplication in and Potential Adaptive Values of Retained Gene Duplicates
Q34234314Dating cryptodiran nodes: origin and diversification of the turtle superfamily Testudinoidea
Q42264847Dating phylogenies with sequentially sampled tips
Q28744434Dating primate divergences through an integrated analysis of palaeontological and molecular data
Q41536067Dating the origin of hepatitis B virus reveals higher substitution rate and adaptation on the branch leading to F/H genotypes.
Q90100008De Novo Assembly and Annotation from Parental and F1 Puma Genomes of the Florida Panther Genetic Restoration Program
Q28603939De Novo Assembly of Coding Sequences of the Mangrove Palm (Nypa fruticans) Using RNA-Seq and Discovery of Whole-Genome Duplications in the Ancestor of Palms
Q90243936De Novo Genome Assembly of the Meadow Brown Butterfly, Maniola jurtina
Q28829132De Novo Transcriptome Analysis of the Common New Zealand Stick Insect Clitarchus hookeri (Phasmatodea) Reveals Genes Involved in Olfaction, Digestion and Sexual Reproduction
Q28607000De Novo Transcriptome Assembly in Firmiana danxiaensis, a Tree Species Endemic to the Danxia Landform
Q92020761De Novo, Divergence, and Mixed Origin Contribute to the Emergence of Orphan Genes in Pristionchus Nematodes
Q33786899De novo analysis of transcriptome dynamics in the migratory locust during the development of phase traits
Q48155279De novo assembly and characterization of the Hucho taimen transcriptome.
Q45022016De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome
Q57930216De novo assembly of mitochondrial genomes provides insights into genetic diversity and molecular evolution in wild boars and domestic pigs
Q64930571De novo assembly of the goldfish (Carassius auratus) genome and the evolution of genes after whole-genome duplication.
Q57143096De novo genome assembly of reveals rapid genome expansion and adaptive evolution
Q54916852De novo genome assembly of the red silk cotton tree (Bombax ceiba).
Q55035213De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish.
Q33458694De novo transcriptome assembly facilitates characterisation of fast-evolving gene families, MHC class I in the bank vole (Myodes glareolus).
Q30589178De novo transcriptomic analyses for non-model organisms: an evaluation of methods across a multi-species data set.
Q21092466Death and resurrection of the human IRGM gene
Q28652639Decelerated genome evolution in modern vertebrates revealed by analysis of multiple lancelet genomes
Q36280844Decipher the ancestry of the plant-specific LBD gene family
Q44456010Deciphering and dating the red panda's ancestry and early adaptive radiation of Musteloidea.
Q57159843Deciphering evolutionary dynamics of SWEET genes in diverse plant lineages
Q91854291Deciphering protein evolution and fitness landscapes with latent space models
Q34382999Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective
Q47110669Deciphering the emergence, genetic diversity and evolution of classical swine fever virus.
Q59340331Deciphering the evolutionary signatures of pinnipeds using novel genome sequences: The first genomes of Phoca largha, Callorhinus ursinus, and Eumetopias jubatus
Q35174587Declining transition/transversion ratios through time reveal limitations to the accuracy of nucleotide substitution models.
Q36072796Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants
Q28597708Deep phylogenomics of a tandem-repeat galectin regulating appendicular skeletal pattern formation
Q57154624Deep taxon sampling reveals the evolutionary dynamics of novel gene families in Pristionchus nematodes
Q41620930Deep-level phylogeny of Cicadomorpha inferred from mitochondrial genomes sequenced by NGS.
Q37217939Degeneration of aflatoxin gene clusters in Aspergillus flavus from Africa and North America
Q28650986Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi
Q97526218Degradation of key photosynthetic genes in the critically endangered semi-aquatic flowering plant Saniculiphyllum guangxiense (Saxifragaceae)
Q92827485Deleterious Mutation Accumulation in Arabidopsis thaliana Pollen Genes: A Role for a Recent Relaxation of Selection
Q51410801Deleterious mutation accumulation in asexual Timema stick insects.
Q33755463Delineation of plant caleosin residues critical for functional divergence, positive selection and coevolution
Q90668813Delineation of the Crucial Evolutionary Amino Acid Sites in Trehalose-6-Phosphate Synthase From Higher Plants
Q35620289Demographic History, Population Structure, and Local Adaptation in Alpine Populations of Cardamine impatiens and Cardamine resedifolia
Q102089956Description of Malenchus sexlineatus n. sp., new records of three known species of Malenchus Andrássy, 1968 (Nematoda: Tylenchidae) and notes on amphidial aperture development
Q116672803Description of a new species of Histampica (Ophiuroidea: Ophiothamnidae) from cold seeps in the South China Sea and analysis of its mitochondrial genome
Q61808462Designing and running an advanced Bioinformatics and genome analyses course in Tunisia
Q39287745Detecting Adaptation in Protein-Coding Genes Using a Bayesian Site-Heterogeneous Mutation-Selection Codon Substitution Model
Q28603252Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae)
Q46917154Detecting coevolution in mammalian sperm-egg fusion proteins
Q35934786Detecting false positive sequence homology: a machine learning approach
Q35488841Detecting functional divergence after gene duplication through evolutionary changes in posttranslational regulatory sequences
Q42129858Detecting genetic introgression: high levels of intersubspecific recombination found in Xylella fastidiosa in Brazil.
Q34094091Detecting genomic regions associated with a disease using variability functions and Adjusted Rand Index
Q33308301Detecting groups of coevolving positions in a molecule: a clustering approach
Q33905492Detecting novel genetic variants associated with isoniazid-resistant Mycobacterium tuberculosis
Q48059167Detecting signatures of positive selection in partial sequences generated on a large scale: pitfalls, procedures and resources
Q41984591Detecting species-site dependencies in large multiple sequence alignments
Q34358251Detecting the immune system response of a 500 year-old Inca mummy.
Q45395096Detecting the signatures of adaptive evolution in protein-coding genes
Q61800492Detecting useful genetic markers and reconstructing the phylogeny of an important medicinal resource plant, Artemisia selengensis, based on chloroplast genomics
Q38416300Detection and Phylogenetic Analysis of Porcine Deltacoronavirus in Korean Swine Farms, 2015.
Q48148409Detection and analysis of methicillin-resistant human-adapted sequence type 398 allows insight into community-associated methicillin-resistant Staphylococcus aureus evolution
Q33698714Detection of Pathways Affected by Positive Selection in Primate Lineages Ancestral to Humans
Q42839822Detection of lineage-specific evolutionary changes among primate species
Q36102373Determinants of exon-level evolutionary rates in Arabidopsis species
Q46281390Determinants of the Efficacy of Natural Selection on Coding and Noncoding Variability in Two Passerine Species
Q30394447Determination of antigenicity-altering patches on the major surface protein of human influenza A/H3N2 viruses
Q28648492Determining the Null Model for Detecting Adaptive Convergence from Genomic Data: A Case Study using Echolocating Mammals
Q34785748Development of eSSR-Markers in Setaria italica and Their Applicability in Studying Genetic Diversity, Cross-Transferability and Comparative Mapping in Millet and Non-Millet Species
Q34440665Developmental decoupling of alternative phenotypes: insights from the transcriptomes of horn-polyphenic beetles
Q92890337Developmental expression and evolution of hexamerin and haemocyanin from Folsomia candida (Collembola)
Q50764408Dictyostelium development shows a novel pattern of evolutionary conservation.
Q43242277Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift?
Q34757583Did androgen-binding protein paralogs undergo neo- and/or Subfunctionalization as the Abp gene region expanded in the mouse genome?
Q28680791Did terrestrial diversification of amoebas (amoebozoa) occur in synchrony with land plants?
Q36896333Differences in environmental stress response among yeasts is consistent with species-specific lifestyles
Q35050729Different evolutionary patterns of hypoxia-inducible factor α (HIF-α) isoforms in the basal branches of Actinopterygii and Sarcopterygii
Q46643721Different gene expressions between cattle and yak provide insights into high-altitude adaptation
Q28743897Different patterns of evolution in the centromeric and telomeric regions of group A and B haplotypes of the human killer cell Ig-like receptor locus
Q33364878Different strategies to persist: the pogo-like Lemi1 transposon produces miniature inverted-repeat transposable elements or typical defective elements in different plant genomes.
Q33886398Differential Evolution between Monotocous and Polytocous Species
Q37349241Differential Functional Constraints Cause Strain-Level Endemism in Polynucleobacter Populations
Q29543946Differential Strengths of Positive Selection Revealed by Hitchhiking Effects at Small Physical Scales in Drosophila melanogaster
Q36666341Differential evolution and neofunctionalization of snake venom metalloprotease domains
Q28714314Differential evolution of MAGE genes based on expression pattern and selection pressure
Q34649969Differential evolutionary fate of an ancestral primate endogenous retrovirus envelope gene, the EnvV syncytin, captured for a function in placentation
Q41484243Differential evolutionary patterns and expression levels between sex-specific and somatic tissue-specific genes in peanut.
Q89715341Differential gene expression between fungal mating types is associated with sequence degeneration
Q34029785Differential gene retention in plastids of common recent origin.
Q39741137Differential genomic variation between short- and long-term bacterial evolution revealed by ultradeep sequencing
Q28741401Differential loss and retention of cytoglobin, myoglobin, and globin-E during the radiation of vertebrates
Q46820604Differential patterns of molecular evolution among Haemosporidian parasite groups
Q36637572Differential requirements for mRNA folding partially explain why highly expressed proteins evolve slowly
Q34350098Differential retention and divergent resolution of duplicate genes following whole-genome duplication
Q33984678Differential retention and expansion of the ancestral genes associated with the paleopolyploidies in modern rosid plants, as revealed by analysis of the extensins super-gene family
Q24810365Differential selection on carotenoid biosynthesis genes as a function of gene position in the metabolic pathway: a study on the carrot and dicots
Q36208545Differential variation patterns between hubs and bottlenecks in human protein-protein interaction networks
Q38667246Differentially Regulated Orthologs in Sorghum and the Subgenomes of Maize.
Q28652425Differentiated adaptive evolution, episodic relaxation of selective constraints, and pseudogenization of umami and sweet taste genes TAS1Rs in catarrhine primates
Q33548494Digital gene expression analysis of the zebra finch genome
Q30435492Direct amplification, sequencing and profiling of Chlamydia trachomatis strains in single and mixed infection clinical samples
Q34729654Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
Q30355905Directional Darwinian Selection in proteins.
Q36363498Directional evolution of Chlamydia trachomatis towards niche-specific adaptation.
Q47552724Discovery of Culex pipiens associated tunisia virus: a new ssRNA(+) virus representing a new insect associated virus family
Q28650068Discovery of prosimian and afrotherian foamy viruses and potential cross species transmissions amidst stable and ancient mammalian co-evolution
Q53283886Discovery of the First Germline-Restricted Gene by Subtractive Transcriptomic Analysis in the Zebra Finch, Taeniopygia guttata.
Q90362715Discovery of the Gene Encoding a Novel Small Serum Protein (SSP) of Protobothrops flavoviridis and the Evolution of SSPs
Q92667313Disease Resistance Genetics and Genomics in Octoploid Strawberry
Q33913662Disentangling the effects of selection and loss bias on gene dynamics
Q46894857Disparate parametric branch-support values from ambiguous characters
Q46309136Disparity, diversity, and duplications in the Caryophyllales
Q34470042Dissecting Molecular Evolution in the Highly Diverse Plant Clade Caryophyllales Using Transcriptome Sequencing
Q47367980Dissecting the complex molecular evolution and expression of polygalacturonase gene family in Brassica rapa ssp. chinensis
Q90910827Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei
Q37648621Dissection of genomic features and variations of three pathotypes of Puccinia striiformis through whole genome sequencing
Q49905783Distinct domains of the AVRPM3A2/F2 avirulence protein from wheat powdery mildew are involved in immune receptor recognition and putative effector function.
Q36384449Distinct effects on diversifying selection by two mechanisms of immunity against Streptococcus pneumoniae.
Q90173905Distinct evolution of toll-like receptor signaling pathway genes in cetaceans
Q33511269Distinct evolutionary patterns between two duplicated color vision genes within cyprinid fishes
Q33725667Distinct hepatitis B virus dynamics in the immunotolerant and early immunoclearance phases.
Q42280575Distinct quasispecies characteristics and positive selection within precore/core gene in hepatitis B virus HBV associated acute-on-chronic liver failure
Q46897066Distinct roles for SOS1 in the convergent evolution of salt tolerance in Eutrema salsugineum and Schrenkiella parvula
Q38653477Distinct selective forces and Neanderthal introgression shaped genetic diversity at genes involved in neurodevelopmental disorders
Q92459475Distinct types of short open reading frames are translated in plant cells
Q28742597Distinctive mitochondrial genome of Calanoid copepod Calanus sinicus with multiple large non-coding regions and reshuffled gene order: useful molecular markers for phylogenetic and population studies
Q35597561Distinctive patterns of evolution of the δ-globin gene (HBD) in primates
Q52339977Distinguishing Among Evolutionary Forces Acting on Genome-Wide Base Composition: Computer Simulation Analysis of Approximate Methods for Inferring Site Frequency Spectra of Derived Mutations in Recombining Regions.
Q34734176Distribution of the sex-determining gene MID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta).
Q37446470Distribution, diversity, evolution, and survival of Helitrons in the maize genome
Q51041779Disulfide Bonds Enable Accelerated Protein Evolution.
Q35791065Divergence and adaptive evolution of the gibberellin oxidase genes in plants
Q35678912Divergence at the edges: peripatric isolation in the montane spiny throated reed frog complex
Q90046179Divergence between genes but limited allelic polymorphism in two MHC class II A genes in Leach's storm-petrels Oceanodroma leucorhoa
Q36295367Divergence in Enzymatic Activities in the Soybean GST Supergene Family Provides New Insight into the Evolutionary Dynamics of Whole-Genome Duplicates.
Q33482456Divergence in function and expression of the NOD26-like intrinsic proteins in plants
Q36933775Divergence in gene expression within and between two closely related flycatcher species
Q36806454Divergence of RNA polymerase α subunits in angiosperm plastid genomes is mediated by genomic rearrangement
Q30367702Divergence of dim-light vision among bats (order: Chiroptera) as estimated by molecular and electrophysiological methods.
Q34332230Divergence of gene body DNA methylation and evolution of plant duplicate genes
Q30981938Divergence of imprinted genes during mammalian evolution
Q47340789Divergence of protein sensing (TLR 4, 5) and nucleic acid sensing (TLR 3, 7) within the reptilian lineage
Q41692215Divergence of the Venom Exogene Repertoire in Two Sister Species of Turriconus.
Q47923556Divergence of the mitochondrial genome structure in the apicomplexan parasites, Babesia and Theileria
Q43701641Divergence times and colonization of the Canary Islands by Gallotia lizards
Q34308403Divergences of MPF2-like MADS-domain proteins have an association with the evolution of the inflated calyx syndrome within Solanaceae
Q37401521Divergent DNA Methylation Provides Insights into the Evolution of Duplicate Genes in Zebrafish.
Q64249705Divergent Evolution of E1A CR3 in Human Adenovirus Species D
Q64093182Divergent Evolution of TRC Genes in Mammalian Niche Adaptation
Q37054466Divergent Evolutionary Pattern of Sugar Transporter Genes is Associated with the Difference in Sugar Accumulation between Grasses and Eudicots
Q33858499Divergent Evolutionary Patterns of NAC Transcription Factors Are Associated with Diversification and Gene Duplications in Angiosperm
Q50063680Divergent and parallel routes of biochemical adaptation in high-altitude passerine birds from the Qinghai-Tibet Plateau.
Q27487785Divergent evolution and molecular adaptation in the Drosophila odorant-binding protein family: inferences from sequence variation at the OS-E and OS-F genes
Q30379132Divergent evolution and purifying selection of the flaA gene sequences in Aeromonas.
Q64120048Divergent evolution in the genomes of closely related lacertids, Lacerta viridis and L. bilineata, and implications for speciation
Q40986405Divergent evolution of Di-lysine ER retention vs. farnesylation motif-mediated anchoring of the AnkB virulence effector to the Legionella-containing vacuolar membrane.
Q42723094Divergent evolution of oxidosqualene cyclases in plants.
Q34979523Divergent evolutionary and expression patterns between lineage specific new duplicate genes and their parental paralogs in Arabidopsis thaliana
Q44107817Divergent evolutionary pattern of starch biosynthetic pathway genes in grasses and dicots
Q28651719Divergent evolutionary rates in vertebrate and mammalian specific conserved non-coding elements (CNEs) in echolocating mammals
Q92023401Divergent evolutionary trajectories of influenza B viruses underlie their contemporaneous epidemic activity
Q39199488Divergent maximum-likelihood-branch-support values for polytomies
Q30358822Divergent positive selection in rhodopsin from lake and riverine cichlid fishes.
Q58415482Diverse Considerations for Successful Phylogenetic Tree Reconstruction: Impacts from Model Misspecification, Recombination, Homoplasy, and Pattern Recognition
Q30907858Diverse MHC IIB allele repertoire increases parasite resistance and body condition in the Long-tailed giant rat (Leopoldamys sabanus).
Q37598959Diverse evolutionary patterns of pneumococcal antigens identified by pangenome-wide immunological screening
Q38401793Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention
Q41135468Diverse selective regimes shape genetic diversity at ADAR genes and at their coding targets
Q33609228Diversification and biogeography of Juniperus (Cupressaceae): variable diversification rates and multiple intercontinental dispersals
Q46799313Diversification and distinctive structural features of S-RNase alleles in the genus Solanum
Q30062103Diversification and evolution of the SDG gene family in Brassica rapa after the whole genome triplication
Q28743304Diversification and the rate of molecular evolution: no evidence of a link in mammals
Q46256841Diversification dynamics and transoceanic Eurasian-Australian disjunction in the genus Picris (Compositae) induced by the interplay of shifts in intrinsic/extrinsic traits and paleoclimatic oscillations
Q30990671Diversification in subtropical mountains: phylogeography, Pleistocene demographic expansion, and evolution of polyphenic mandibles in Taiwanese stag beetle, Lucanus formosanus
Q91826280Diversification of Transposable Elements in Arthropods and Its Impact on Genome Evolution
Q46242686Diversification of Type VI Secretion System Toxins Reveals Ancient Antagonism among Bee Gut Microbes
Q33642446Diversification of a single ancestral gene into a successful toxin superfamily in highly venomous Australian funnel-web spiders
Q46238843Diversification of defensins and NLRs in Arabidopsis species by different evolutionary mechanisms
Q34211982Diversification of genes for carotenoid biosynthesis in aphids following an ancient transfer from a fungus
Q34339986Diversification of the C-TERMINALLY ENCODED PEPTIDE (CEP) gene family in angiosperms, and evolution of plant-family specific CEP genes
Q35755251Diversification of the ant odorant receptor gene family and positive selection on candidate cuticular hydrocarbon receptors
Q39622818Diversification of the monoterpene synthase gene family (TPSb) in Protium, a highly diverse genus of tropical trees
Q27310766Diversification, evolution and sub-functionalization of 70kDa heat-shock proteins in two sister species of antarctic krill: differences in thermal habitats, responses and implications under climate change
Q80890436Diversifying and purifying selection in the peptide binding region of DRB in mammals
Q30986346Diversifying selection and functional analysis of interleukin-4 suggests antagonism-driven evolution at receptor-binding interfaces.
Q41737733Diversifying selection in the wheat stem rust fungus acts predominantly on pathogen-associated gene families and reveals candidate effectors
Q36136422Diversifying selection of the anthocyanin biosynthetic downstream gene UFGT accelerates floral diversity of island Scutellaria species
Q37230511Diversifying selective pressure on influenza B virus hemagglutinin
Q98185550Diversity analysis at MHC class II DQA locus in buffalo (Bubalus bubalis) indicates extensive duplication and trans-species evolution
Q40831335Diversity and evolution of Ty1-copia retroelements within Chalcidoidea by reverse transcriptase domain analysis
Q57811211Diversity and evolution of cytochromes P450 in stramenopiles
Q30049205Diversity and evolution of potato mop-top virus
Q33682590Diversity and evolution of sex determination systems in terrestrial isopods
Q41256796Diversity and genome dynamics of marine cyanophages using metagenomic analyses
Q28473396Diversity in the glucose transporter-4 gene (SLC2A4) in humans reflects the action of natural selection along the old-world primates evolution
Q33357617Diversity of Prdm9 zinc finger array in wild mice unravels new facets of the evolutionary turnover of this coding minisatellite
Q36983160DnaK-Dependent Accelerated Evolutionary Rate in Prokaryotes
Q36073439Do saline taxa evolve faster? Comparing relative rates of molecular evolution between freshwater and marine eukaryotes
Q41874054Does gene translocation accelerate the evolution of laterally transferred genes?
Q21563386Does positive selection drive transcription factor binding site turnover? A test with Drosophila cis-regulatory modules
Q47733382Does the Genetic Feature of the Chinese Tree Shrew (Tupaia belangeri chinensis) Support Its Potential as a Viable Model for Alzheimer's Disease Research?
Q64119228Does the Presence of Transposable Elements Impact the Epigenetic Environment of Human Duplicated Genes?
Q33605392Does the core circadian clock in the moss Physcomitrella patens (Bryophyta) comprise a single loop?
Q28728522Dolphin genome provides evidence for adaptive evolution of nervous system genes and a molecular rate slowdown
Q38933859Domain loss facilitates accelerated evolution and neofunctionalization of duplicate snake venom metalloproteinase toxin genes
Q37557672Domestication and the mitochondrial genome: comparing patterns and rates of molecular evolution in domesticated mammals and birds and their wild relatives
Q28689753Domestication process of the goat revealed by an analysis of the nearly complete mitochondrial protein-encoding genes
Q36782151Don't pull the plug! the Drosophila mating plug preserves fertility
Q28607613Donkey genome and insight into the imprinting of fast karyotype evolution
Q60313460Doublesex Evolution Is Correlated with Social Complexity in Ants
Q63507964Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: )
Q92001115Draft Genome Assembly for the Tibetan Black Bear (Ursus thibetanus thibetanus)
Q89881548Draft Genome Assembly of Floccularia luteovirens, an Edible and Symbiotic Mushroom on Qinghai-Tibet Plateau
Q90636461Draft Genome Sequence for the Tree Pathogen Phytophthora plurivora
Q90206581Draft Genome and Complete Hox-Cluster Characterization of the Sterlet (Acipenser ruthenus)
Q26315263Draft Genomes of Anopheles cracens and Anopheles maculatus: Comparison of Simian Malaria and Human Malaria Vectors in Peninsular Malaysia
Q92259389Draft Genomes of Two Artocarpus Plants, Jackfruit (A. heterophyllus) and Breadfruit (A. altilis)
Q47391771Draft genome analysis provides insights into the fiber yield, crude protein biosynthesis, and vegetative growth of domesticated ramie (Boehmeria nivea L. Gaud).
Q46266758Draft genome of the Marco Polo Sheep (Ovis ammon polii).
Q96578681Draft genome of the famous ornamental plant Paeonia suffruticosa
Q46280615Draft genome of the gayal, Bos frontalis
Q33872293Draft genome of the kiwifruit Actinidia chinensis
Q50320905Draft genome of the milu (Elaphurus davidianus).
Q46269438Draft genome of the reindeer (Rangifer tarandus).
Q64280304Draft genome of the river water buffalo
Q55400768Draft genome sequence of Camellia sinensis var. sinensis provides insights into the evolution of the tea genome and tea quality.
Q37738350Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement.
Q37484901Draft genome sequence of an inbred line of Chenopodium quinoa, an allotetraploid crop with great environmental adaptability and outstanding nutritional properties
Q90912599Draft genome sequence of cauliflower (Brassica oleracea L. var. botrytis) provides new insights into the C genome in Brassica species
Q36906720Draft genome sequence of the Tibetan antelope
Q28676965Draft genome sequence of the mulberry tree Morus notabilis
Q57275639Draft genome sequence of wild Prunus yedoensis reveals massive inter-specific hybridization between sympatric flowering cherries
Q90281773Draft genomes of female and male turbot Scophthalmus maximus
Q49998275Draft genomes of two blister beetles Hycleus cichorii and Hycleus phaleratus.
Q64103024Draft genomic and transcriptome resources for marine chelicerate Tachypleus tridentatus
Q34386190Drcd-1 related: a positively selected spermatogenesis retrogene in Drosophila
Q102152440Drivers and dynamics of a massive adaptive radiation in cichlid fishes
Q50532403Drosophila Nnf1 paralogs are partially redundant for somatic and germ line kinetochore function.
Q36810524Drosophila americana as a model species for comparative studies on the molecular basis of phenotypic variation
Q53150240Dual-targeted proteins tend to be more evolutionarily conserved.
Q33699382Duplicate dmbx1 genes regulate progenitor cell cycle and differentiation during zebrafish midbrain and retinal development
Q42320267Duplicate gene divergence by changes in microRNA binding sites in Arabidopsis and Brassica.
Q38992391Duplication and Adaptive Evolution of a Key Centromeric Protein in Mimulus, a Genus with Female Meiotic Drive
Q28709277Duplication and concerted evolution in a master sex determiner under balancing selection
Q35834020Duplication and diversification of the LEAFY HULL STERILE1 and Oryza sativa MADS5 SEPALLATA lineages in graminoid Poales
Q60913054Duplication and expression of horizontally transferred polygalacturonase genes is associated with host range expansion of mirid bugs
Q58044818Duplication and expression ofCYC2-like genes in the origin and maintenance of corolla zygomorphy in Lamiales
Q92335685Duplication and parallel evolution of the pancreatic ribonuclease gene (RNASE1) in folivorous non-colobine primates, the howler monkeys (Alouatta spp.).
Q33346314Duplication of AP1 within the Spinacia oleracea L. AP1/FUL clade is followed by rapid amino acid and regulatory evolution
Q30382268Duplication of the class I cytosolic small heat shock protein gene and potential functional divergence revealed by sequence variations flanking the {alpha}-crystallin domain in the genus Rhododendron (Ericaceae).
Q37738566Duplications and Positive Selection Drive the Evolution of Parasitism-Associated Gene Families in the Nematode Strongyloides papillosus
Q35005725Dynamic evolution of rht-1 homologous regions in grass genomes
Q30417740Dynamic evolution of toll-like receptor multigene families in echinoderms
Q92767025Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds
Q37482224Dynamic functional evolution of an odorant receptor for sex-steroid-derived odors in primates
Q34977974Dynamic programming procedure for searching optimal models to estimate substitution rates based on the maximum-likelihood method
Q53394729Dynamic sensitivity and nonlinear interactions influence the system-level evolutionary patterns of phototransduction proteins.
Q91695207Dynamic virulence-related regions of the plant pathogenic fungus Verticillium dahliae display enhanced sequence conservation
Q38708729Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila
Q50042232Dynamics of Evolution of Poliovirus Neutralizing Antigenic Sites and Other Capsid Functional Domains during a Large and Prolonged Outbreak.
Q35895444Dynamics of dengue disease severity determined by the interplay between viral genetics and serotype-specific immunity
Q37260857Dynamics of genome change among Legionella species
Q46891715Dynamics of transcriptome evolution in the model eukaryote Neurospora
Q36264936E6 and E7 Gene Polymorphisms in Human Papillomavirus Types-58 and 33 Identified in Southwest China
Q90066636E6 and E7 gene polymorphisms in human papillomavirus Type-6 identified in Southwest China
Q37373626EASER: Ensembl Easy Sequence Retriever
Q38715306EDEN: Evolutionary Dynamics within Environments.
Q33836219EREM: Parameter Estimation and Ancestral Reconstruction by Expectation-Maximization Algorithm for a Probabilistic Model of Genomic Binary Characters Evolution
Q31049606ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.
Q35129018Each flying fox on its own branch: a phylogenetic tree for Pteropus and related genera (Chiroptera: Pteropodidae).
Q57036623Early Diverging Insect-Pathogenic Fungi of the Order Entomophthorales Possess Diverse and Unique Subtilisin-Like Serine Proteases
Q92197744Early Sex-Chromosome Evolution in the Diploid Dioecious Plant Mercurialis annua
Q91639109Early Stage Adaptation of a Mesophilic Green Alga to Antarctica: Systematic Increases in Abundance of Enzymes and LEA Proteins
Q36646666Early and multiple origins of metastatic lineages within primary tumors
Q46911389Early evolution of the genetic basis for soma in the volvocaceae
Q35750823Early evolutionary history and genomic features of gene duplicates in the human genome
Q28649958Early mesozoic coexistence of amniotes and hepadnaviridae
Q34570374Early vertebrate origin of melanocortin 2 receptor accessory proteins (MRAPs).
Q64075927EasyCodeML: A visual tool for analysis of selection using CodeML
Q35154308Eco-immunology of fish invasions: the role of MHC variation
Q36387289Ecological adaptation in bacteria: speciation driven by codon selection
Q35695626Ecological and Lineage-Specific Factors Drive the Molecular Evolution of Rhodopsin in Cichlid Fishes.
Q30631670Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts
Q36532593Ecological host fitting of Trypanosoma cruzi TcI in Bolivia: mosaic population structure, hybridization and a role for humans in Andean parasite dispersal
Q36017454Ecological speciation in sympatric palms: 1. Gene expression, selection and pleiotropy.
Q34271133Edwardsiella comparative phylogenomics reveal the new intra/inter-species taxonomic relationships, virulence evolution and niche adaptation mechanisms
Q51576254Effect of genetic convergence on phylogenetic inference.
Q47214416Effective estimation of the minimum number of amino acid residues required for functional divergence between duplicate genes
Q34565874Effective population size does not predict codon usage bias in mammals
Q42376057Effective purifying selection in ancient asexual oribatid mites
Q36574548Effects of DNA Methylation and Chromatin State on Rates of Molecular Evolution in Insects
Q36592469Effects of Gene Duplication, Positive Selection, and Shifts in Gene Expression on the Evolution of the Venom Gland Transcriptome in Widow Spiders
Q36428834Effects of premature termination codon polymorphisms in the Drosophila pseudoobscura subclade
Q28273773Efficiencies of the NJp, Maximum Likelihood, and Bayesian Methods of Phylogenetic Construction for Compositional and Noncompositional Genes
Q39439378Efficient Detection of Repeating Sites to Accelerate Phylogenetic Likelihood Calculations
Q42248761Efficient computation of the phylogenetic likelihood function on multi-gene alignments and multi-core architectures
Q42635599Efficient selection of branch-specific models of sequence evolution
Q36102540Egernia stokesii (gidgee skink) MHC I positively selected sites lack concordance with HLA peptide binding regions.
Q88936960Egg Coat Proteins Across Metazoan Evolution
Q34228936EggLib: processing, analysis and simulation tools for population genetics and genomics
Q36250175Eggshell palaeogenomics: Palaeognath evolutionary history revealed through ancient nuclear and mitochondrial DNA from Madagascan elephant bird (Aepyornis sp.) eggshell
Q90496620Elaboration of the corticosteroid synthesis pathway in primates through a multi-step enzyme
Q46496170Electrostatic potentials of the S-locus F-box proteins contribute to the pollen S specificity in self-incompatibility in Petunia hybrida.
Q40248568Elevated levels of adaption in Helicobacter pylori genomes from Japan; a link to higher incidences of gastric cancer?
Q46569983Elucidating the triplicated ancestral genome structure of radish based on chromosome-level comparison with the Brassica genomes
Q28757195Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates
Q33363094Elusive origins of the extra genes in Aspergillus oryzae
Q92082941Emergence and Evolution of ERM Proteins and Merlin in Metazoans
Q64004848Emergence of a Chimeric Globin Pseudogene and Increased Hemoglobin Oxygen Affinity Underlie the Evolution of Aquatic Specializations in Sirenia
Q34593165Emergence of novel domains in proteins
Q61803113Emergence of trait variability through the lens of nitrogen assimilation in
Q42087581Empirical evaluation of a prior for Bayesian phylogenetic inference
Q30570033Empirical evaluation of partitioning schemes for phylogenetic analyses of mitogenomic data: an avian case study.
Q27332084Encoding asymmetry of the N-glycosylation motif facilitates glycoprotein evolution
Q59128419Endangered Père David's deer genome provides insights into population recovering
Q37578145Enhancing the pharmaceutical properties of protein drugs by ancestral sequence reconstruction
Q30994602Enlarged Multilocus Data set Provides Surprisingly Younger Time of Origin for the Plethodontidae, the Largest Family of Salamanders
Q36599707Ensembl comparative genomics resources
Q24644266EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates
Q46441245Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A-genome species as cytoplasmic donor of the allotetraploid species.
Q36387293Environmental adaptation contributes to gene polymorphism across the Arabidopsis thaliana genome
Q46395159Environmental variability and the evolution of the glucocorticoid receptor (Nr3c1) in African starlings.
Q39016121Environmentally driven evolution of Rubisco and improved photosynthesis and growth within the C3 genus Limonium (Plumbaginaceae).
Q35778929Enzyme functional evolution through improved catalysis of ancestrally nonpreferred substrates
Q30370951Epidemic Clones, Oceanic Gene Pools, and Eco-LD in the Free Living Marine Pathogen Vibrio parahaemolyticus.
Q48056863Epidemiologic and phylogenetic characteristics of porcine reproductive and respiratory syndrome viruses in conventional swine farms of Jeju Island as a candidate region for PRRSV eradication
Q40923980Epidemiological and genetic analysis concerning the coxsackievirus A6 related endemic outbreak of hand-foot-mouth disease in Taizhou, China, during 2013.
Q40564926Epidemiological and genetic analysis of hand-foot-mouth disease by enterovirus A71 in Taizhou, P. R. China, between 2010 and 2013.
Q37207914Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population.
Q40134556Episodic adaptive diversification of classical swine fever virus RNA-dependent RNA polymerase NS5B.
Q28754725Episodic evolution and adaptation of chloroplast genomes in ancestral grasses
Q84649378Episodic sitewise positive selection on the signal recognition particle protein Ffh in Actinobacteria
Q43975683Epistasis as the primary factor in molecular evolution
Q28652130Epistasis constrains mutational pathways of hemoglobin adaptation in high-altitude pikas
Q21090199Epistatic adaptive evolution of human color vision
Q51116265Epistatic interactions influence terrestrial-marine functional shifts in cetacean rhodopsin.
Q35665981Epstein-Barr virus isolates retain their capacity to evade T cell immunity through BNLF2a despite extensive sequence variation
Q42710784Essentiality Is a Strong Determinant of Protein Rates of Evolution during Mutation Accumulation Experiments in Escherichia coli.
Q28242380Establishing a time-scale for plant evolution
Q28603289Estimating Divergence Times and Substitution Rates in Rhizobia
Q30952178Estimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data Alone
Q28710463Estimating divergence times in large molecular phylogenies
Q42042437Estimating empirical codon hidden Markov models
Q34115062Estimating the distribution of selection coefficients from phylogenetic data using sitewise mutation-selection models
Q30423291Estimating the rate of irreversibility in protein evolution.
Q34229048Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record.
Q43759186Estimation of the ancestral effective population sizes of African great apes under different selection regimes
Q53279728Estimation of universal and taxon-specific parameters of prokaryotic genome evolution.
Q34439625Eugenol synthase genes in floral scent variation in Gymnadenia species
Q45832387Evaluating patterns of convergent evolution and trans-species polymorphism at MHC immunogenes in two sympatric stickleback species
Q92899831Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics
Q31131999Evaluating the Impact of Genomic Data and Priors on Bayesian Estimates of the Angiosperm Evolutionary Timescale
Q28603326Evaluating the Phylogenetic Status of the Extinct Japanese Otter on the Basis of Mitochondrial Genome Analysis
Q36794181Evaluating the adaptive potential of the European eel: is the immunogenetic status recovering?
Q35882363Evaluation of Ancestral Sequence Reconstruction Methods to Infer Nonstationary Patterns of Nucleotide Substitution
Q47138363Evaluation of Shear Strength of RC Beams with Multiple Interfaces Formed before Initial Setting Using 3D Printing Technology.
Q35623346Evaluation of a Phylogenetic Marker Based on Genomic Segment B of Infectious Bursal Disease Virus: Facilitating a Feasible Incorporation of this Segment to the Molecular Epidemiology Studies for this Viral Agent
Q64985997Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.
Q48057157Evaluation of genetic markers for identifying isolates of the species of the genus Fusarium
Q35802496Evidence for Adaptation to the Tibetan Plateau Inferred from Tibetan Loach Transcriptomes
Q64267663Evidence for Faster X Chromosome Evolution in Spiders
Q46507537Evidence for Non-neutral Evolution in a Sodium Channel Gene in African Weakly Electric Fish (Campylomormyrus, Mormyridae).
Q28547038Evidence for Positive Selection within the PgiC1 Locus in the Grass Festuca ovina
Q34130821Evidence for a common toolbox based on necrotrophy in a fungal lineage spanning necrotrophs, biotrophs, endophytes, host generalists and specialists
Q28730192Evidence for a convergent slowdown in primate molecular rates and its implications for the timing of early primate evolution
Q56889529Evidence for a unique DNA-dependent RNA polymerase in cereal crops
Q33955867Evidence for acquisition of virulence effectors in pathogenic chytrids
Q37343260Evidence for adaptive evolution of low-temperature stress response genes in a Pooideae grass ancestor
Q39236333Evidence for an Early Origin of Vernalization Responsiveness in Temperate Pooideae Grasses
Q41490694Evidence for an ancient whole genome duplication in the cycad lineage
Q34146142Evidence for centromere drive in the holocentric chromosomes of Caenorhabditis
Q46492317Evidence for compensatory evolution of ribosomal proteins in response to rapid divergence of mitochondrial rRNA.
Q41115175Evidence for deleterious hepatitis C virus quasispecies mutation loads that differentiate the response patterns in IFN-based antiviral therapy
Q47781002Evidence for diversifying selection in a set of Mycobacterium tuberculosis genes in response to antibiotic- and nonantibiotic-related pressure.
Q35673582Evidence for genetic differentiation and variable recombination rates among Dutch populations of the opportunistic human pathogen Aspergillus fumigatus.
Q64967013Evidence for intragenic recombination and selective sweep in an effector gene of Phytophthora infestans.
Q34006454Evidence for maintenance of sex determinants but not of sexual stages in red yeasts, a group of early diverged basidiomycetes.
Q36909127Evidence for positive selection in putative virulence factors within the Paracoccidioides brasiliensis species complex
Q33702765Evidence for positive selection in the gene fruitless in Anastrepha fruit flies
Q34064535Evidence for positive selection on the leptin gene in Cetacea and Pinnipedia
Q90260934Evidence for relaxed selection of mitogenome in rapid-flow cyprinids
Q47233059Evidence for repeated loss of selective constraint in rhodopsin of amblyopsid cavefishes (Teleostei: Amblyopsidae).
Q92215241Evidence for selection events during domestication by extensive mitochondrial genome analysis between japonica and indica in cultivated rice
Q33906212Evidence for the additions of clustered interacting nodes during the evolution of protein interaction networks from network motifs
Q34261218Evidence for widespread positive and negative selection in coding and conserved noncoding regions of Capsella grandiflora.
Q47551680Evidence of Adaptive Evolution and Relaxed Constraints in Sex-Biased Genes of South American and West Indies Fruit Flies (Diptera: Tephritidae).
Q96133680Evidence of Echolocation in the Common Shrew from Molecular Convergence with Other Echolocating Mammals
Q28645971Evidence of Positive Selection of Aquaporins Genes from Pontoporia blainvillei during the Evolutionary Process of Cetaceans
Q40771400Evidence of Statistical Inconsistency of Phylogenetic Methods in the Presence of Multiple Sequence Alignment Uncertainty
Q38846088Evidence of a Conserved Molecular Response to Selection for Increased Brain Size in Primates
Q46908915Evidence of adaptive evolution of alpine pheasants to high-altitude environment from mitogenomic perspective
Q46633767Evidence of gene orthology and trans-species polymorphism, but not of parallel evolution, despite high levels of concerted evolution in the major histocompatibility complex of flamingo species
Q46255285Evidence of high-altitude adaptation in the glyptosternoid fish, Creteuchiloglanis macropterus from the Nujiang River obtained through transcriptome analysis.
Q41688733Evidence of horizontal gene transfer between obligate leaf nodule symbionts
Q35045573Evidence of microevolution of Salmonella Typhimurium during a series of egg-associated outbreaks linked to a single chicken farm
Q37588907Evidence of neofunctionalization after the duplication of the highly conserved Polycomb group gene Caf1-55 in the obscura group of Drosophila
Q89874536Evidence of pathogen-induced immunogenetic selection across the large geographic range of a wild seabird
Q58078941Evidence of peripheral olfactory impairment in the domestic silkworms: insight from the comparative transcriptome and population genetics
Q28601300Evidence of positive selection associated with placental loss in tiger sharks
Q33575393Evidence of positive selection at codon sites localized in extracellular domains of mammalian CC motif chemokine receptor proteins
Q51066376Evidence of positive selection at signal peptide region of interferon gamma.
Q41999560Evidence of selection pressures of neuraminidase gene (NA) of influenza A virus subtype H5N1 on different hosts in Guangxi Province of China
Q55416091Evidence of the Red-Queen Hypothesis from Accelerated Rates of Evolution of Genes Involved in Biotic Interactions in Pneumocystis.
Q35238667Evidence of the accumulation of allele-specific non-synonymous substitutions in the young region of recombination suppression within the mating-type chromosomes of Neurospora tetrasperma
Q35682289EvoDB: a database of evolutionary rate profiles, associated protein domains and phylogenetic trees for PFAM-A.
Q37208944Evolution along the mutation gradient in the dynamic mitochondrial genome of salamanders
Q38793701Evolution and Antiviral Specificities of Interferon-Induced Mx Proteins of Bats against Ebola, Influenza, and Other RNA Viruses.
Q46242547Evolution and Expansion of the Prokaryote-Like Lipoxygenase Family in the Brown Alga Saccharina japonica
Q60909344Evolution and Expression Divergence of the CYP78A Subfamily Genes in Soybean
Q47297355Evolution and Function of the Populus SABATH Family Reveal That a Single Amino Acid Change Results in a Substrate Switch
Q47613756Evolution and Spatiotemporal Dynamics of Enterovirus A71 Subgenogroups in Vietnam.
Q46562820Evolution and adaptation of SAR11 and Cyanobium in a saline Tibetan lake.
Q39661390Evolution and biogeography of an emerging quasispecies: diversity patterns of the fish Viral Hemorrhagic Septicemia virus (VHSv).
Q111629450Evolution and developmental genetics of floral display—A review of progress
Q28681331Evolution and divergence of the mammalian SAMD9/SAMD9L gene family
Q51890721Evolution and diverse roles of the CUP-SHAPED COTYLEDON genes in Arabidopsis leaf development.
Q116672961Evolution and diversification of Mountain voles (Rodentia: Cricetidae)
Q56976033Evolution and diversification of the plant gibberellin receptor GID1
Q111629660Evolution and diversity of axon guidance Robo receptor family genes
Q39090578Evolution and expression analysis of the soybean glutamate decarboxylase gene family.
Q91694463Evolution and expression of genes encoding TCP transcription factors in Solanum tuberosum reveal the involvement of StTCP23 in plant defence
Q34558909Evolution and expression plasticity of opsin genes in a fig pollinator, Ceratosolen solmsi
Q21283838Evolution and functional divergence of NLRP genes in mammalian reproductive systems
Q28821587Evolution and phylogenetic application of the MC1R gene in the Cobitoidea (Teleostei: Cypriniformes)
Q46043939Evolution and phylogenetic utility of the melanocortin-1 receptor gene (MC1R) in Cetartiodactyla
Q34862400Evolution and regulation of the downstream gene of hypoxia-inducible factor-1alpha in naked carp (Gymnocypris przewalskii) from Lake Qinghai, China
Q90093540Evolution and roles of cytokinin genes in angiosperms 2: Do ancient CKXs play housekeeping roles while non-ancient CKXs play regulatory roles?
Q28752380Evolution and survival on eutherian sex chromosomes
Q37611572Evolution and transmission of drug-resistant tuberculosis in a Russian population
Q38851337Evolution by gene duplication of Medicago truncatula PISTILLATA-like transcription factors
Q34756309Evolution by selection, recombination, and gene duplication in MHC class I genes of two Rhacophoridae species
Q37302849Evolution history of duplicated smad3 genes in teleost: insights from Japanese flounder, Paralichthys olivaceus
Q28654444Evolution in an ancient detoxification pathway is coupled with a transition to herbivory in the drosophilidae
Q47442585Evolution of AGL6-like MADS box genes in grasses (Poaceae): ovule expression is ancient and palea expression is new.
Q41934205Evolution of ASPM is associated with both increases and decreases in brain size in primates
Q38944749Evolution of Brain Active Gene Promoters in Human Lineage Towards the Increased Plasticity of Gene Regulation
Q36020518Evolution of CCL11: genetic characterization in lagomorphs and evidence of positive and purifying selection in mammals
Q49215504Evolution of CYP2J19, a gene involved in colour vision and red coloration in birds: positive selection in the face of conservation and pleiotropy.
Q42292737Evolution of Chaperonin Gene Duplication in Stigonematalean Cyanobacteria (Subsection V)
Q64117627Evolution of Cold Acclimation and Its Role in Niche Transition in the Temperate Grass Subfamily Pooideae
Q28749205Evolution of Conus peptide genes: duplication and positive selection in the A-superfamily
Q38659871Evolution of DMSP (dimethylsulfoniopropionate) biosynthesis pathway: Origin and phylogenetic distribution in polyploid Spartina (Poaceae, Chloridoideae).
Q33590752Evolution of DNA Methylation across Insects
Q52580917Evolution of DNMT2 in drosophilids: Evidence for positive and purifying selection and insights into new protein (pathways) interactions.
Q40102415Evolution of DUF1313 family members across plant species and their association with maize photoperiod sensitivity
Q28596167Evolution of Digestive Enzymes and RNASE1 Provides Insights into Dietary Switch of Cetaceans
Q46343052Evolution of GSTD1 in Cactophilic Drosophila
Q110445220Evolution of Geosiris (Iridaceae): historical biogeography and plastid-genome evolution in a genus of non-photosynthetic tropical rainforest herbs disjunct across the Indian Ocean
Q55332810Evolution of Gustatory Receptor Gene Family Provides Insights into Adaptation to Diverse Host Plants in Nymphalid Butterflies.
Q95656869Evolution of Hemoglobin Genes in a Subterranean Rodent Species (Lasiopodomys mandarinus)
Q64884881Evolution of Hepatitis B Virus Receptor NTCP Reveals Differential Pathogenicities and Species Specificities of Hepadnaviruses in Primates, Rodents, and Bats.
Q38991046Evolution of Local Mutation Rate and Its Determinants
Q89357107Evolution of MHC class I genes in Eurasian badgers, genus Meles (Carnivora, Mustelidae)
Q36212277Evolution of MHC class I genes in the European badger (Meles meles)
Q52637989Evolution of Melanoma Antigen-A11 (MAGEA11) During Primate Phylogeny.
Q91618724Evolution of Olfactory Functions on the Fire Ant Social Chromosome
Q92358087Evolution of Oryza chloroplast genomes promoted adaptation to diverse ecological habitats
Q87610005Evolution of PAS domains and PAS-containing genes in eukaryotes
Q28601742Evolution of Philodendron (Araceae) species in Neotropical biomes
Q92732874Evolution of Photorespiratory Glycolate Oxidase among Archaeplastida
Q28645972Evolution of Tibetan wild boars
Q89830491Evolution of Ty1 copy number control in yeast by horizontal transfer and recombination
Q35769392Evolution of a Novel Antiviral Immune-Signaling Interaction by Partial-Gene Duplication.
Q28604160Evolution of a Planktonic Foraminifer during Environmental Changes in the Tropical Oceans
Q30388326Evolution of a Sigma Factor: An All-In-One of Gene Duplication, Horizontal Gene Transfer, Purifying Selection, and Promoter Differentiation.
Q37616498Evolution of a cellular immune response in Drosophila: a phenotypic and genomic comparative analysis.
Q38259525Evolution of a cluster of innate immune genes (beta-defensins) along the ancestral lines of chicken and zebra finch.
Q34203400Evolution of a derived protein-protein interaction between HoxA11 and Foxo1a in mammals caused by changes in intramolecular regulation
Q24628063Evolution of a distinct genomic domain in Drosophila: comparative analysis of the dot chromosome in Drosophila melanogaster and Drosophila virilis
Q41809660Evolution of a membrane protein regulon in Saccharomyces.
Q43271751Evolution of a novel phenolic pathway for pollen development
Q46949458Evolution of a symbiotic receptor through gene duplications in the legume-rhizobium mutualism
Q36690708Evolution of an MCM complex in flies that promotes meiotic crossovers by blocking BLM helicase
Q36786870Evolution of an RNP assembly system: a minimal SMN complex facilitates formation of UsnRNPs in Drosophila melanogaster
Q41252629Evolution of an ancient venom: recognition of a novel family of cnidarian toxins and the common evolutionary origin of sodium and potassium neurotoxins in sea anemone
Q30497673Evolution of an antifreeze protein by neofunctionalization under escape from adaptive conflict
Q37661352Evolution of an epigenetic gene ensemble within the genus Anopheles
Q43114543Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants
Q33556655Evolution of bacterial protein-tyrosine kinases and their relaxed specificity toward substrates
Q47135278Evolution of beak morphology in the Ground Tit revealed by comparative transcriptomics
Q28741492Evolution of cagA oncogene of Helicobacter pylori through recombination
Q36663977Evolution of coding microsatellites in primate genomes
Q100457745Evolution of coding sequence and gene expression of blowflies and botflies with contrasting feeding habits
Q34146243Evolution of conserved non-coding sequences within the vertebrate Hox clusters through the two-round whole genome duplications revealed by phylogenetic footprinting analysis.
Q52568525Evolution of cyclohexadienyl dehydratase from an ancestral solute-binding protein.
Q46486995Evolution of dark colour in toucans (Ramphastidae): a case of molecular adaptation?
Q64089983Evolution of digestive enzymes and dietary diversification in birds
Q42870939Evolution of dopamine-related systems: biosynthesis, degradation and receptors
Q35917147Evolution of dosage compensation under sexual selection differs between X and Z chromosomes
Q37398967Evolution of duplicated beta-globin genes and the structural basis of hemoglobin isoform differentiation in Mus
Q33910480Evolution of endogenous retroviruses in the Suidae: evidence for different viral subpopulations in African and Eurasian host species
Q40254017Evolution of full-length genomes of HBV quasispecies in sera of patients with a coexistence of HBsAg and anti-HBs antibodies
Q39099043Evolution of gamete attraction molecules: evidence for purifying selection in speract and its receptor, in the pantropical sea urchin Diadema
Q60922188Evolution of gene expression levels in the male reproductive organs of mosquitoes
Q85642974Evolution of general transcription factors
Q39216685Evolution of genes involved in feeding preference and metabolic processes in Calliphoridae (Diptera: Calyptratae).
Q28728079Evolution of genes involved in gamete interaction: evidence for positive selection, duplications and losses in vertebrates
Q35189819Evolution of herbivory in Drosophilidae linked to loss of behaviors, antennal responses, odorant receptors, and ancestral diet
Q56894704Evolution of homospermidine synthase in the convolvulaceae: a story of gene duplication, gene loss, and periods of various selection pressures
Q24614384Evolution of human-specific neural SRGAP2 genes by incomplete segmental duplication
Q33913643Evolution of immune chemoreceptors into sensors of the outside world
Q29545093Evolution of increased complexity in a molecular machine
Q42286171Evolution of infectious bronchitis virus in Taiwan: positively selected sites in the nucleocapsid protein and their effects on RNA-binding activity
Q41035507Evolution of intraspecific transcriptomic landscapes in yeasts
Q34604486Evolution of land plant genes encoding L-Ala-D/L-Glu epimerases (AEEs) via horizontal gene transfer and positive selection
Q21559405Evolution of linked avirulence effectors in Leptosphaeria maculans is affected by genomic environment and exposure to resistance genes in host plants
Q34432201Evolution of major histocompatibility complex class I and class II genes in the brown bear
Q91791765Evolution of major histocompatibility complex class I genes in the sable Martes zibellina (Carnivora, Mustelidae)
Q36260150Evolution of meiotic recombination genes in maize and teosinte
Q46246246Evolution of microRNA827 targeting in the plant kingdom
Q43504482Evolution of mitochondrial-encoded cytochrome oxidase subunits in endothermic fish: the importance of taxon-sampling in codon-based models
Q24629088Evolution of modern birds revealed by mitogenomics: timing the radiation and origin of major orders
Q91627570Evolution of multifunctionality through a pleiotropic substitution in the innate immune protein S100A9
Q24642537Evolution of mutation rates: phylogenomic analysis of the photolyase/cryptochrome family
Q36412903Evolution of nonspectral rhodopsin function at high altitudes.
Q33633552Evolution of olfactory receptor genes in primates dominated by birth-and-death process
Q33531557Evolution of plant RNA polymerase IV/V genes: evidence of subneofunctionalization of duplicated NRPD2/NRPE2-like paralogs in Viola (Violaceae).
Q64099184Evolution of plastid genomes of Holcoglossum (Orchidaceae) with recent radiation
Q92983614Evolution of protein kinase substrate recognition at the active site
Q36293883Evolution of protein-protein interaction networks in yeast.
Q34639492Evolution of red algal plastid genomes: ancient architectures, introns, horizontal gene transfer, and taxonomic utility of plastid markers
Q33398518Evolution of regulatory sequences in 12 Drosophila species
Q61806766Evolution of salivary glue genes in Drosophila species
Q36032476Evolution of selenophosphate synthetases: emergence and relocation of function through independent duplications and recurrent subfunctionalization
Q30575296Evolution of separate predation- and defence-evoked venoms in carnivorous cone snails
Q46964269Evolution of sex determination systems with heterogametic males and females in silene
Q34738154Evolution of smooth tubercle Bacilli PE and PE_PGRS genes: evidence for a prominent role of recombination and imprint of positive selection
Q33602993Evolution of substrate specificity in a retained enzyme driven by gene loss
Q34945927Evolution of synonymous codon usage in Neurospora tetrasperma and Neurospora discreta
Q33603957Evolution of the 3R-MYB Gene Family in Plants
Q111629249Evolution of the 4-coumarate:coenzyme A ligase (4CL) gene family: Conserved evolutionary pattern and two new gene classes in gymnosperms
Q46900226Evolution of the ABPA subunit of androgen-binding protein expressed in the submaxillary glands in New and Old World rodent taxa
Q33362881Evolution of the APETALA2 Gene Lineage in Seed Plants
Q33884943Evolution of the Araliaceae family inferred from complete chloroplast genomes and 45S nrDNAs of 10 Panax-related species
Q59462968Evolution of the Biosynthetic Pathway for Cyanogenic Glucosides in Lepidoptera
Q42933132Evolution of the Cinnamyl/Sinapyl Alcohol Dehydrogenase (CAD/SAD) gene family: the emergence of real lignin is associated with the origin of Bona Fide CAD.
Q37543612Evolution of the Cytolytic Pore-Forming Proteins (Actinoporins) in Sea Anemones.
Q64254589Evolution of the Drosophila melanogaster Chromatin Landscape and Its Associated Proteins
Q35837721Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon
Q35146537Evolution of the F-box gene family in Euarchontoglires: gene number variation and selection patterns
Q64105033Evolution of the Highly Repetitive PEVK Region of Titin Across Mammals
Q47249890Evolution of the MC5R gene in placental mammals with evidence for its inactivation in multiple lineages that lack sebaceous glands
Q35224604Evolution of the Max and Mlx networks in animals
Q111629438Evolution of the PEBP gene family and selective signature on FT -like clade
Q50033125Evolution of the POU1F1 transcription factor in mammals: Rapid change of the alternatively-spliced β-domain.
Q50225646Evolution of the RH gene family in vertebrates revealed by brown hagfish (Eptatretus atami) genome sequences.
Q60530323Evolution of the SRGAP2 Gene Is Linked to Intelligence in Mammals
Q36166709Evolution of the Selenoproteome in Helicobacter pylori and Epsilonproteobacteria
Q28661685Evolution of the bHLH genes involved in stomatal development: implications for the expansion of developmental complexity of stomata in land plants
Q28754701Evolution of the class C GPCR Venus flytrap modules involved positive selected functional divergence
Q101631798Evolution of the eyes of vipers with and without infrared-sensing pit organs
Q46498824Evolution of the immune system influences speciation rates in teleost fishes
Q34981811Evolution of the insect desaturase gene family with an emphasis on social Hymenoptera
Q46799032Evolution of the insect yellow gene family
Q42692266Evolution of the melanocortin-1 receptor gene (MC1R) in chamois (Rupicapra spp.).
Q33406634Evolution of the multifaceted eukaryotic akirin gene family
Q42468779Evolution of the nuclear-encoded cytochrome oxidase subunits in vertebrates
Q28603611Evolution of the protease-activated receptor family in vertebrates
Q37677282Evolution of the relaxin/insulin-like gene family in anthropoid primates
Q44140102Evolution of the sex-lethal gene in insects and origin of the sex-determination system in Drosophila
Q28748475Evolution of the sweet taste receptor gene Tas1r2 in bats
Q43118377Evolution of three parent genes and their retrogene copies in Drosophila species
Q42256141Evolution of viral sensing RIG-I-like receptor genes in Leporidae genera Oryctolagus, Sylvilagus, and Lepus
Q37416005Evolution stings: the origin and diversification of scorpion toxin peptide scaffolds
Q33361886Evolution, diversification, and expression of KNOX proteins in plants.
Q35739729Evolution, expansion and expression of the Kunitz/BPTI gene family associated with long-term blood feeding in Ixodes Scapularis
Q50876103Evolution, expression analysis, and functional verification of Catharanthus roseus RLK1-like kinase (CrRLK1L) family proteins in pear (Pyrus bretchneideri).
Q46059658Evolution, functional divergence and conserved exon-intron structure of bHLH/PAS gene family
Q40977762Evolution, gene expression profiling and 3D modeling of CSLD proteins in cotton
Q90001628Evolution-based screening enables genome-wide prioritization and discovery of DNA repair genes
Q36520909Evolution-guided identification of antiviral specificity determinants in the broadly acting interferon-induced innate immunity factor MxA.
Q28646470Evolution: are the monkeys' typewriters rigged?
Q35064252Evolutionarily conserved surface residues constitute actin binding sites of tropomyosin
Q28551681Evolutionary Analyses Suggest a Function of MxB Immunity Proteins Beyond Lentivirus Restriction
Q55078028Evolutionary Analysis Provides Insight Into the Origin and Adaptation of HCV.
Q91638608Evolutionary Analysis of Unicellular Species in Chlamydomonadales Through Chloroplast Genome Comparison With the Colonial Volvocine Algae
Q37184681Evolutionary Consequences of DNA Methylation in a Basal Metazoan
Q41877712Evolutionary Conservation of 3-Iodothyronamine as an Agonist at the Trace Amine-Associated Receptor 1.
Q27674721Evolutionary Diversification of Mesobuthus  -Scorpion Toxins Affecting Sodium Channels
Q36904228Evolutionary Dynamics of Floral Homeotic Transcription Factor Protein-Protein Interactions
Q36865015Evolutionary Dynamics of MERS-CoV: Potential Recombination, Positive Selection and Transmission
Q41383761Evolutionary Dynamics of Male Reproductive Genes in the Drosophila virilis Subgroup
Q30397618Evolutionary Dynamics of Pandemic Methicillin-Sensitive Staphylococcus aureus ST398 and Its International Spread via Routes of Human Migration
Q92069637Evolutionary Dynamics of Sex Chromosomes of Paleognathous Birds
Q91844544Evolutionary Dynamics of Structural Variation at a Key Locus for Color Pattern Diversification in Cichlid Fishes
Q61755647Evolutionary Dynamics of the 5S rDNA Gene Family in the Mussel Mytilus: Mixed Effects of Birth-and-Death and Concerted Evolution
Q27320843Evolutionary Dynamics of the Cellulose Synthase Gene Superfamily in Grasses
Q46610251Evolutionary Dynamics of the Leucine-Rich Repeat Receptor-Like Kinase (LRR-RLK) Subfamily in Angiosperms
Q50068308Evolutionary Epigenomics of Retrotransposon-Mediated Methylation Spreading in Rice.
Q46506938Evolutionary Fates and Dynamic Functionalization of Young Duplicate Genes in Arabidopsis Genomes
Q28601042Evolutionary Genetics of Hypoxia Tolerance in Cetaceans during Diving
Q57458401Evolutionary Genetics of Hypoxia and Cold Tolerance in Mammals
Q35740900Evolutionary Genomics of Genes Involved in Olfactory Behavior in the Drosophila melanogaster Species Group
Q64062293Evolutionary History of (Anacardiaceae) From the Temperate and Subtropical Zones of China Based on cpDNA and Nuclear DNA Sequences and Ecological Niche Model
Q35891325Evolutionary History of Cathepsin L (L-like) Family Genes in Vertebrates
Q47178457Evolutionary History of Chemosensory-Related Gene Families across the Arthropoda.
Q100569664Evolutionary History of Histamine Receptors: Early Vertebrate Origin and Expansion of the H3-H4 Subtypes
Q28607831Evolutionary History of the Photolyase/Cryptochrome Superfamily in Eukaryotes
Q91681914Evolutionary History of the Toll-Like Receptor Gene Family across Vertebrates
Q37485679Evolutionary Insights into Taste Perception of the Invasive Pest Drosophila suzukii.
Q49523011Evolutionary Origin, Gradual Accumulation and Functional Divergence of Heat Shock Factor Gene Family with Plant Evolution.
Q27682640Evolutionary Origins of a Bioactive Peptide Buried within Preproalbumin
Q35549018Evolutionary Pattern and Regulation Analysis to Support Why Diversity Functions Existed within PPAR Gene Family Members.
Q90324011Evolutionary Perspectives of Genotype-Phenotype Factors in Leishmania Metabolism
Q28645658Evolutionary Stasis in Cycad Plastomes and the First Case of Plastome GC-Biased Gene Conversion
Q97519884Evolutionary Timeline and Genomic Plasticity Underlying the Lifestyle Diversity in Rhizobiales
Q35667531Evolutionary Trends of the Transposase-Encoding Open Reading Frames A and B (orfA and orfB) of the Mycobacterial IS6110 Insertion Sequence
Q48176520Evolutionary analyses of the avirulence effector AvrStb6 in global populations of Zymoseptoria tritici identify candidate amino acids involved in recognition.
Q42378132Evolutionary analysis and expression profiling of zebra finch immune genes
Q42210416Evolutionary analysis identifies an MX2 haplotype associated with natural resistance to HIV-1 infection.
Q37469705Evolutionary analysis of Burkholderia pseudomallei identifies putative novel virulence genes, including a microbial regulator of host cell autophagy
Q38627018Evolutionary analysis of Chironius snakes unveils cryptic diversity and provides clues to diversification in the Neotropics
Q40953441Evolutionary analysis of FAM83H in vertebrates.
Q36466270Evolutionary analysis of heterochromatin protein compatibility by interspecies complementation in Saccharomyces
Q52365379Evolutionary analysis of mitochondrially encoded proteins of toad-headed lizards, Phrynocephalus, along an altitudinal gradient.
Q28334390Evolutionary analysis of selective constraints identifies ameloblastin (AMBN) as a potential candidate for amelogenesis imperfecta
Q100736993Evolutionary analysis of the Moringa oleifera genome reveals a recent burst of plastid to nucleus gene duplications
Q46914473Evolutionary analysis of the contact system indicates that kininogen evolved adaptively in mammals and in human populations
Q35651792Evolutionary analysis of the female-specific avian W chromosome
Q37742552Evolutionary analysis of vision genes identifies potential drivers of visual differences between giraffe and okapi
Q46961964Evolutionary analysis of voltage-gated potassium channels by Bayes method.
Q36271594Evolutionary analysis reveals regulatory and functional landscape of coding and non-coding RNA editing.
Q33363761Evolutionary and Expression Analysis Provides Evidence for the Plant Glutamate-like Receptors Family is Involved in Woody Growth-related Function
Q48054445Evolutionary and Functional Analysis of Membrane-Bound NAC Transcription Factor Genes in Soybean
Q46417214Evolutionary and Functional Mitogenomics Associated With the Genetic Restoration of the Florida Panther
Q27680884Evolutionary and Structural Analyses of Mammalian Haloacid Dehalogenase-type Phosphatases AUM and Chronophin Provide Insight into the Basis of Their Different Substrate Specificities
Q43478071Evolutionary and biogeographic history of weasel-like carnivorans (Musteloidea).
Q57021751Evolutionary and developmental dynamics of sex-biased gene expression in common frogs with proto-Y chromosomes
Q24605807Evolutionary and functional analyses of the interaction between the myeloid restriction factor SAMHD1 and the lentiviral Vpx protein
Q36094144Evolutionary and functional analysis of mulberry type III polyketide synthases.
Q35342482Evolutionary and functional analysis of the invariant SWIM domain in the conserved Shu2/SWS1 protein family from Saccharomyces cerevisiae to Homo sapiens
Q35173954Evolutionary and functional novelty of pancreatic ribonuclease: a study of Musteloidea (order Carnivora).
Q52585858Evolutionary associations of endosymbiotic ciliates shed light on the timing of the marsupial-placental split.
Q46339327Evolutionary changes of Hox genes and relevant regulatory factors provide novel insights into mammalian morphological modifications
Q92735426Evolutionary characteristics of intergenic transcribed regions indicate rare novel genes and widespread noisy transcription in the Poaceae
Q41823352Evolutionary coincidence of adaptive changes in exuperantia and the emergence of bicoid in Cyclorrhapha (Diptera)
Q97424163Evolutionary compromises in fungal fitness: hydrophobins can hinder the adverse dispersal of conidiospores and challenge their survival
Q47310256Evolutionary conservation and functional divergence of the LFK gene family play important roles in the photoperiodic flowering pathway of land plants
Q28657468Evolutionary conservation in genes underlying human psychiatric disorders
Q58087992Evolutionary conservation of Y chromosome ampliconic gene families despite extensive structural variation
Q36363892Evolutionary conservation of the PA-X open reading frame in segment 3 of influenza A virus
Q55313047Evolutionary convergence in lignin-degrading enzymes.
Q111629274Evolutionary divergence of the APETALA1 and CAULIFLOWER proteins
Q111629361Evolutionary divergence of the PISTILLATA-like proteins in Hedyosmum orientale (Chloranthaceae) after gene duplication
Q93386730Evolutionary divergence of the nuclear pore complex from fungi to metazoans
Q33389861Evolutionary diversification of plant shikimate kinase gene duplicates
Q28601254Evolutionary diversification of retinoic acid receptor ligand-binding pocket structure by molecular tinkering
Q42380666Evolutionary drivers of thermoadaptation in enzyme catalysis
Q39064147Evolutionary dynamic of antigenic residues on influenza B hemagglutinin
Q34222659Evolutionary dynamics analysis of human metapneumovirus subtype A2: genetic evidence for its dominant epidemic
Q24622076Evolutionary dynamics of Clostridium difficile over short and long time scales
Q28648310Evolutionary dynamics of Rh2 opsins in birds demonstrate an episode of accelerated evolution in the New World warblers (Setophaga)
Q31124148Evolutionary dynamics of chloroplast genomes in low light: a case study of the endolithic green alga Ostreobium quekettii
Q38258263Evolutionary dynamics of coding and non-coding transcriptomes
Q28650495Evolutionary dynamics of hAT DNA transposon families in Saccharomycetaceae
Q90109603Evolutionary dynamics of lineage 2 West Nile virus in Europe, 2004-2018: Phylogeny, selection pressure and phylogeography
Q35060411Evolutionary dynamics of overlapped genes in Salmonella
Q37478050Evolutionary dynamics of rhodopsin type 2 opsins in vertebrates
Q33494716Evolutionary dynamics of the LTR retrotransposons roo and rooA inferred from twelve complete Drosophila genomes
Q33390357Evolutionary dynamics of the N1 neuraminidases of the main lineages of influenza A viruses
Q34794997Evolutionary dynamics of the accessory genome of Listeria monocytogenes
Q64116429Evolutionary dynamics of the chromatophore genome in three photosynthetic Paulinella species
Q37107579Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: functional implications
Q28712012Evolutionary dynamics of the interferon-induced transmembrane gene family in vertebrates
Q36525053Evolutionary effects of translocations in bacterial genomes
Q35172208Evolutionary expansion of the amidohydrolase superfamily in bacteria in response to the synthetic compounds molinate and diuron
Q28607579Evolutionary fate and implications of retrocopies in the African coelacanth genome
Q50527765Evolutionary features and intracellular behavior of the PRTB protein.
Q33769248Evolutionary forces affecting synonymous variations in plant genomes.
Q34789845Evolutionary genomics and adaptive evolution of the Hedgehog gene family (Shh, Ihh and Dhh) in vertebrates
Q33999173Evolutionary genomics implies a specific function of Ant4 in mammalian and anole lizard male germ cells
Q30794348Evolutionary genomics of Borrelia burgdorferi sensu lato: findings, hypotheses, and the rise of hybrids
Q28729961Evolutionary genomics of human intellectual disability
Q98578894Evolutionary genomics of mammalian lung cancer genes reveals signatures of positive selection in APC, RB1 and TP53
Q46271986Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.
Q33381547Evolutionary genomics reveals lineage-specific gene loss and rapid evolution of a sperm-specific ion channel complex: CatSpers and CatSperbeta
Q41704775Evolutionary history and functional divergence of the cytochrome P450 gene superfamily between Arabidopsis thaliana and Brassica species uncover effects of whole genome and tandem duplications
Q27681817Evolutionary history and metabolic insights of ancient mammalian uricases
Q117478414Evolutionary history and pan-genome dynamics of strawberry ( Fragaria spp.)
Q92860382Evolutionary history of DNA methylation related genes in chordates: new insights from multiple whole genome duplications
Q35955126Evolutionary history of LTR retrotransposon chromodomains in plants
Q28652581Evolutionary history of Methyltransferase 1 genes in hexaploid wheat
Q28742308Evolutionary history of Otophysi (Teleostei), a major clade of the modern freshwater fishes: Pangaean origin and Mesozoic radiation
Q42607330Evolutionary history of an MHC gene in two leporid species: characterisation of Mhc-DQA in the European brown hare and comparison with the European rabbit
Q34687082Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping
Q36017054Evolutionary history of copy-number-variable locus for the low-affinity Fcγ receptor: mutation rate, autoimmune disease, and the legacy of helminth infection
Q99711930Evolutionary history of dimethylsulfoniopropionate (DMSP) demethylation enzyme DmdA in marine bacteria
Q33379270Evolutionary history of histone demethylase families: distinct evolutionary patterns suggest functional divergence
Q56342095Evolutionary history of human revealed by genome-wide analyses of related ape parasites
Q33371356Evolutionary history of the alpha2,8-sialyltransferase (ST8Sia) gene family: tandem duplications in early deuterostomes explain most of the diversity found in the vertebrate ST8Sia genes
Q46244983Evolutionary history of the cobalamin-independent methionine synthase gene family across the land plants
Q21134977Evolutionary history of the vertebrate mitogen activated protein kinases family
Q28584474Evolutionary history of versatile-lipases from Agaricales through reconstruction of ancestral structures
Q30912043Evolutionary insights into host-pathogen interactions from mammalian sequence data.
Q42660068Evolutionary insights into the role of the essential centromere protein CAL1 in Drosophila
Q61796340Evolutionary insights of and
Q33633526Evolutionary insights on C4 photosynthetic subtypes in grasses from genomics and phylogenetics
Q30354224Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza.
Q37330638Evolutionary interplay between sister cytochrome P450 genes shapes plasticity in plant metabolism.
Q40396005Evolutionary interplay between structure, energy and epistasis in the coat protein of the ϕX174 phage family
Q43705760Evolutionary neutrality of mtDNA introgression: evidence from complete mitogenome analysis in roe deer.
Q38698905Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspective
Q28681208Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish families
Q34455388Evolutionary pattern in the OXT-OXTR system in primates: coevolution and positive selection footprints
Q41276536Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
Q34361927Evolutionary patterns of RNA-based gene duplicates in Caenorhabditis nematodes coincide with their genomic features
Q35918639Evolutionary patterns of Toll-like receptor signaling pathway genes in the Suidae.
Q91496703Evolutionary patterns of chimeric retrogenes in Oryza species
Q28742027Evolutionary patterns of the mitochondrial genome in Metazoa: exploring the role of mutation and selection in mitochondrial protein coding genes
Q33803467Evolutionary patterns of two major reproduction candidate genes (Zp2 and Zp3) reveal no contribution to reproductive isolation between bovine species
Q42264055Evolutionary perspective on hepatitis B virus with an expanded sampling strategy
Q24652846Evolutionary position of breviate amoebae and the primary eukaryote divergence
Q36942317Evolutionary principles of modular gene regulation in yeasts
Q33887004Evolutionary radiation of lanthipeptides in marine cyanobacteria.
Q36524999Evolutionary rate and duplicability in the Arabidopsis thaliana protein-protein interaction network.
Q64243704Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila
Q31148545Evolutionary rate covariation identifies new members of a protein network required for Drosophila melanogaster female post-mating responses
Q28709087Evolutionary rate covariation in meiotic proteins results from fluctuating evolutionary pressure in yeasts and mammals
Q35864729Evolutionary rate covariation reveals shared functionality and coexpression of genes
Q37061857Evolutionary rate heterogeneity of core and attachment proteins in yeast protein complexes
Q35037568Evolutionary rate patterns of genes involved in the Drosophila Toll and Imd signaling pathway
Q33494730Evolutionary rate patterns of the Gibberellin pathway genes
Q34399488Evolutionary rates and gene dispensability associate with replication timing in the archaeon Sulfolobus islandicus
Q30387254Evolutionary rates at codon sites may be used to align sequences and infer protein domain function
Q92876752Evolutionary rates of and selective constraints on the mitochondrial genomes of Orthoptera insects with different wing types
Q58866811Evolutionary rates of mammalian telomere-stability genes correlate with karyotype features and female germline expression
Q35005954Evolutionary reconstruction and population genetics analysis of aurora kinases
Q34263045Evolutionary reconstructions of the transferrin receptor of Caniforms supports canine parvovirus being a re-emerged and not a novel pathogen in dogs
Q47992680Evolutionary relationship of disease resistance genes in soybean and Arabidopsis specific for the Pseudomonas syringae effectors AvrB and AvrRpm1.
Q33695711Evolutionary relationships among primary endosymbionts of the mealybug subfamily phenacoccinae (hemiptera: Coccoidea: Pseudococcidae)
Q28743533Evolutionary relationships of the old world fruit bats (Chiroptera, Pteropodidae): another star phylogeny?
Q28750453Evolutionary replacement of UV vision by violet vision in fish
Q36373151Evolutionary restoration of fertility in an interspecies hybrid yeast, by whole-genome duplication after a failed mating-type switch.
Q41221660Evolutionary routes to biochemical innovation revealed by integrative analysis of a plant-defense related specialized metabolic pathway.
Q42545713Evolutionary signals of selection on cognition from the great tit genome and methylome.
Q28649688Evolutionary signatures amongst disease genes permit novel methods for gene prioritization and construction of informative gene-based networks
Q34474698Evolutionary study of duplications of the miRNA machinery in aphids associated with striking rate acceleration and changes in expression profiles.
Q33825024Evolutionary study of the isoflavonoid pathway based on multiple copies analysis in soybean
Q50438430Evolutionary suppression of erythropoiesis via the modulation of TGF-β signalling in an Antarctic icefish.
Q36178814Evolutionary switches between two serine codon sets are driven by selection
Q33680779Evolutionary systems biology of amino acid biosynthetic cost in yeast
Q28472615Evolutionary trajectories of beta-lactamase CTX-M-1 cluster enzymes: predicting antibiotic resistance
Q28597729Evolutionary trajectories of snake genes and genomes revealed by comparative analyses of five-pacer viper
Q35881382Evolutionary transformation of rod photoreceptors in the all-cone retina of a diurnal garter snake
Q30382663Evolutionary trends of A(H1N1) influenza virus hemagglutinin since 1918
Q54045634Evolving Perceptions on the Antiquity of the Modern Avian Tree
Q27312400Exaptation of Bornavirus-Like Nucleoprotein Elements in Afrotherians
Q89737532Exceptional Enlargement of the Mitochondrial Genome Results from Distinct Causes in Different Rain Frogs (Anura: Brevicipitidae: Breviceps)
Q30912427Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome
Q46911441Expanding knowledge of the Rubisco kinetics variability in plant species: environmental and evolutionary trends.
Q58542893Expansion and Functional Divergence of the SHORT VEGETATIVE PHASE (SVP) Genes in Eudicots
Q34231006Expansion and diversification of the SET domain gene family following whole-genome duplications in Populus trichocarpa
Q38664830Expansion by whole genome duplication and evolution of the sox gene family in teleost fish
Q92353016Expansion of a core regulon by transposable elements promotes Arabidopsis chemical diversity and pathogen defense
Q46443607Expansion of inverted repeat does not decrease substitution rates in Pelargonium plastid genomes
Q43259322Expansion of the redox-sensitive proteome coincides with the plastid endosymbiosis.
Q91535402Expansion of vomeronasal receptor genes (OlfC) in the evolution of fright reaction in Ostariophysan fishes
Q36289151Experimental Evolution of Escherichia coli Harboring an Ancient Translation Protein
Q41832619Experimental recreation of the evolution of lignin-degrading enzymes from the Jurassic to date
Q24635353Exploiting models of molecular evolution to efficiently direct protein engineering
Q92857186Exploring molecular evolution of Rubisco in C3 and CAM Orchidaceae and Bromeliaceae
Q58794948Exploring the Limits and Causes of Plastid Genome Expansion in Volvocine Green Algae
Q86689489Exploring the evolutionary rate differences between human disease and non-disease genes
Q28544854Exploring the genetic basis of adaptation to high elevations in reptiles: a comparative transcriptome analysis of two toad-headed agamas (genus Phrynocephalus)
Q57092980Exploring the genome and transcriptome of the cave nectar bat Eonycteris spelaea with PacBio long-read sequencing
Q34460412Exploring the limits for reduction of plastid genomes: a case study of the mycoheterotrophic orchids Epipogium aphyllum and Epipogium roseum.
Q30354521Exploring the molecular basis of adaptive evolution in hydrothermal vent crab Austinograea alayseae by transcriptome analysis.
Q34685448Exploring the molecular epidemiology and evolutionary dynamics of influenza A virus in Taiwan
Q39256490Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen).
Q93012576Exploring the therapeutic potential of modern and ancestral phenylalanine/tyrosine ammonia-lyases as supplementary treatment of hereditary tyrosinemia
Q28732778Exploring uncertainty in the calibration of the molecular clock
Q56520162Explosive diversification of marine fishes at the Cretaceous–Palaeogene boundary
Q92692539Expressed Vomeronasal Type-1 Receptors (V1rs) in Bats Uncover Conserved Sequences Underlying Social Chemical Signaling
Q39999884Expression Divergence Is Correlated with Sequence Evolution but Not Positive Selection in Conifers
Q27488257Expression and evolutionary divergence of the non-conventional olfactory receptor in four species of fig wasp associated with one species of fig
Q37171771Expression and sequence evolution of aromatase cyp19a1 and other sexual development genes in East African cichlid fishes
Q28478683Expression and trans-specific polymorphism of self-incompatibility RNases in coffea (Rubiaceae)
Q83274522Expression diversity and evolutionary dynamics of rice duplicate genes
Q33864231Expression level, cellular compartment and metabolic network position all influence the average selective constraint on mammalian enzymes
Q36694030Extensive Positive Selection Drives the Evolution of Nonstructural Proteins in Lineage C Betacoronaviruses
Q92509768Extensive chromosomal rearrangements and rapid evolution of novel effector superfamilies contribute to host adaptation and speciation in the basal ascomycetous fungi
Q34633932Extensive copy-number variation of young genes across stickleback populations
Q55481764Extensive exchange of transposable elements in the Drosophila pseudoobscura group.
Q43227269Extensive functional diversification of the Populus glutathione S-transferase supergene family.
Q45974668Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti.
Q91794178Extensive host-switching of avian feather lice following the Cretaceous-Paleogene mass extinction event
Q90649216Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes
Q30431238Extensive loss of RNA editing sites in rapidly evolving Silene mitochondrial genomes: selection vs. retroprocessing as the driving force
Q64124033Extensive loss of cell-cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts
Q30434749Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia.
Q46107865Extensive polymorphism and evidence of selection pressure on major histocompatibility complex DLA-DRB1, DQA1 and DQB1 class II genes in Croatian grey wolves.
Q48039680Extensive polymorphism of the major histocompatibility complex DRA gene in Balkan donkeys: perspectives on selection and genealogy.
Q90065384Extensive survey of the ycf4 plastid gene throughout the IRLC legumes: Robust evidence of its locus and lineage specific accelerated rate of evolution, pseudogenization and gene loss in the tribe Fabeae
Q36954510Extensive variation at MHC DRB in the New Zealand sea lion (Phocarctos hookeri) provides evidence for balancing selection.
Q100569631Extensive variation in nucleotide substitution rate and gene/intron loss in mitochondrial genomes of Pelargonium
Q36353662Extinction vs. Rapid Radiation: The Juxtaposed Evolutionary Histories of Coelotine Spiders Support the Eocene-Oligocene Orogenesis of the Tibetan Plateau
Q37367323Extraordinarily low evolutionary rates of short wavelength-sensitive opsin pseudogenes
Q35047111Extraordinary sequence divergence at Tsga8, an X-linked gene involved in mouse spermiogenesis
Q41760677Extreme Mitogenomic Variation in Natural Populations of Chaetognaths.
Q30831935Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
Q92129099Extreme mito-nuclear discordance in a peninsular lizard: the role of drift, selection, and climate
Q48319123Extreme sensitivity to ultraviolet light in the fungal pathogen causing white-nose syndrome of bats.
Q46051365Eyes underground: regression of visual protein networks in subterranean mammals
Q38284605FHOD proteins in actin dynamics--a formin' class of its own.
Q41962935FOXP in Tetrapoda: Intrinsically Disordered Regions, Short Linear Motifs and their evolutionary significance
Q33552818FPGA Acceleration of the phylogenetic likelihood function for Bayesian MCMC inference methods
Q49335453FUSTr: a tool to find gene families under selection in transcriptomes.
Q58721935Factors Influencing Gene Family Size Variation Among Related Species in a Plant Family, Solanaceae
Q57470288Factors driving effective population size and pan-genome evolution in bacteria
Q42415610Factors influencing the diversity of iron uptake systems in aquatic microorganisms
Q55255628Failure to Recover Major Events of Gene Flux in Real Biological Data Due to Method Misapplication.
Q27300147Family Wide Molecular Adaptations to Underground Life in African Mole-Rats Revealed by Phylogenomic Analysis
Q41866889Family size evolution in Drosophila chemosensory gene families: a comparative analysis with a critical appraisal of methods
Q46548781Family-assisted inference of the genetic architecture of major histocompatibility complex variation
Q55495035Fast Evolution and Lineage-Specific Gene Family Expansions of Aphid Salivary Effectors Driven by Interactions with Host-Plants.
Q46240469Fast algorithms for computing phylogenetic divergence time
Q46460821Fast and Accurate Estimates of Divergence Times from Big Data
Q28743370Fast and slow implementations of relaxed-clock methods show similar patterns of accuracy in estimating divergence times
Q37345021Fast, adaptive evolution at a bacterial host-resistance locus: the PFam54 gene array in Borrelia burgdorferi
Q50068090Faster Evolving Primate Genes Are More Likely to Duplicate.
Q34472637Faster-X effects in two Drosophila lineages
Q33690901Feline Immunodeficiency Virus Evolutionarily Acquires Two Proteins, Vif and Protease, Capable of Antagonizing Feline APOBEC3
Q37252960Fematrin-1 is involved in fetomaternal cell-to-cell fusion in Bovinae placenta and has contributed to diversity of ruminant placentation
Q55952862Fern genomes elucidate land plant evolution and cyanobacterial symbioses
Q92315366Few SINEs of life: Alu elements have little evidence for biological relevance despite elevated translation
Q39134473Finding Direction in the Search for Selection
Q64981422Fine-Tuning the Expression of Duplicate Genes by Translational Regulation in Arabidopsis and Maize.
Q110951306First Phylogenomic Assessment of the Amphitropical New World Ant Genus Dorymyrmex (Hymenoptera: Formicidae), a Longstanding Taxonomic Puzzle
Q91944417First de novo whole genome sequencing and assembly of the bar-headed goose
Q89715344First draft genome of the sable, Martes zibellina
Q36590574First evidence for functional vomeronasal 2 receptor genes in primates
Q45359456First evidence of the emergence of novel putative infectious bronchitis virus genotypes in Cuba
Q39772089First insights into fern matK phylogeny.
Q36387322Fish lateral line innovation: insights into the evolutionary genomic dynamics of a unique mechanosensory organ
Q41849560Fitness conferred by replaced amino acids declines with time
Q28686917Flight loss linked to faster molecular evolution in insects
Q58786780Floral evolution by simplification in Monanthotaxis (Annonaceae) and hypotheses for pollination system shifts
Q36434275Fluid Spatial Dynamics of West Nile Virus in the United States: Rapid Spread in a Permissive Host Environment
Q47813215Flux Control in Glycolysis Varies Across the Tree of Life
Q41909404Following gene duplication, paralog interference constrains transcriptional circuit evolution
Q33627522Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs.
Q99233953Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate
Q33633447Footprints of inversions at present and past pseudoautosomal boundaries in human sex chromosomes
Q55440560Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris.
Q100958434Formation and diversification of a paradigm biosynthetic gene cluster in plants
Q37212775Formyl peptide receptors are candidate chemosensory receptors in the vomeronasal organ
Q28750757Fossil and molecular evidence constrain scenarios for the early evolutionary and biogeographic history of hystricognathous rodents
Q33500383FoxO gene family evolution in vertebrates
Q34007336Frequent changes in expression profile and accelerated sequence evolution of duplicated imprinted genes in arabidopsis
Q28654754Frequent loss and alteration of the MOXD2 gene in catarrhines and whales: a possible connection with the evolution of olfaction
Q21284061From Antarctica or Asia? New colonization scenario for Australian-New Guinean narrow mouth toads suggested from the findings on a mysterious genus Gastrophrynoides
Q26750941From Mollusks to Medicine: A Venomics Approach for the Discovery and Characterization of Therapeutics from Terebridae Peptide Toxins
Q28593528From PPROM to caul: The evolution of membrane rupture in mammals.
Q36365719From molecules to mating: Rapid evolution and biochemical studies of reproductive proteins
Q42012406From trajectories to averages: an improved description of the heterogeneity of substitution rates along lineages
Q30380690Full circumpolar migration ensures evolutionary unity in the Emperor penguin.
Q96430938Full-length transcript sequencing accelerates the transcriptome research of Gymnocypris namensis, an iconic fish of the Tibetan Plateau
Q58802335Full-length transcriptome of Misgurnus anguillicaudatus provides insights into evolution of genus Misgurnus
Q91841643Full-length transcriptome sequencing provides insights into the evolution of apocarotenoid biosynthesis in Crocus sativus
Q38490885Function relaxation followed by diversifying selection after whole-genome duplication in flowering plants
Q36744986Functional Annotation and Comparative Analysis of a Zygopteran Transcriptome
Q36882175Functional Divergence in Teleost Cardiac Troponin Paralogs Guides Variation in the Interaction of TnI Switch Region with TnC.
Q48172540Functional Divergence of Diterpene Syntheses in the Medicinal Plant Salvia miltiorrhiza
Q35989085Functional Divergence of the Nuclear Receptor NR2C1 as a Modulator of Pluripotentiality During Hominid Evolution
Q46477668Functional Effects of a Retained Ancestral Polymorphism in Prestin
Q36214987Functional and Evolutionary Analyses Identify Proteolysis as a General Mechanism for NLRP1 Inflammasome Activation
Q28681892Functional and evolutionary analysis of the genome of an obligate fungal symbiont
Q33569354Functional bias in molecular evolution rate of Arabidopsis thaliana
Q28659790Functional characterization of spectral tuning mechanisms in the great bowerbird short-wavelength sensitive visual pigment (SWS1), and the origins of UV/violet vision in passerines and parrots
Q36673282Functional consequences of sequence variation in the pheromone biosynthetic gene pgFAR for Ostrinia moths
Q28748752Functional conservation of DNA methylation in the pea aphid and the honeybee
Q33628469Functional copies of the Mst77F gene on the Y chromosome of Drosophila melanogaster.
Q42943360Functional differentiation of the glycosyltransferases that contribute to the chemical diversity of bioactive flavonol glycosides in grapevines (Vitis vinifera).
Q47290774Functional divergence and comparative in-silico study of Cas4 proteins of DUF83 class.
Q47147524Functional divergence and intron variability during evolution of angiosperm TERMINAL FLOWER1 (TFL1) genes.
Q90259223Functional divergence of bitter taste receptors in a nectar-feeding bird
Q51151054Functional divergence of duplicate genes several million years after gene duplication in Arabidopsis.
Q34354277Functional divergence of gene duplicates - a domain-centric view
Q33751883Functional divergence of the NIP III subgroup proteins involved altered selective constraints and positive selection
Q36586464Functional evolution of an anthocyanin pathway enzyme during a flower color transition
Q35264484Functional gametophytic self-incompatibility in a peripheral population of Solanum peruvianum (Solanaceae).
Q39540578Functional mutations in spike glycoprotein of Zaire ebolavirus associated with an increase in infection efficiency
Q37350169Functional opsin retrogene in nocturnal moth
Q52588160Functional relevance of synonymous alleles reflected in allele rareness in the population.
Q28600981Functional role of positively selected amino acid substitutions in mammalian rhodopsin evolution
Q33807305Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features
Q58541909Functional trade-offs and environmental variation shaped ancient trajectories in the evolution of dim-light vision
Q34222584Functional validation of hydrophobic adaptation to physiological temperature in the small heat shock protein αA-crystallin
Q33916050Functional variants of the melanocortin-4 receptor associated with the Odontoceti and Mysticeti suborders of cetaceans
Q35826201Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees
Q30357223GATA transcription factors in vertebrates: evolutionary, structural and functional interplay.
Q97523929GBA3: a polymorphic pseudogene in humans that experienced repeated gene loss during mammalian evolution
Q33599425GIGA: a simple, efficient algorithm for gene tree inference in the genomic age.
Q21134529GLADX: an automated approach to analyze the lineage-specific loss and pseudogenization of genes
Q27678143Gain-of-Sensitivity Mutations in a Trim5-Resistant Primary Isolate of Pathogenic SIV Identify Two Independent Conserved Determinants of Trim5α Specificity
Q36023271Gains and Losses of Transcription Factor Binding Sites in Saccharomyces cerevisiae and Saccharomyces paradoxus
Q43765035Galega orientalis is more diverse than Galega officinalis in Caucasus--whole-genome AFLP analysis and phylogenetics of symbiosis-related genes.
Q42660080Gamma paleohexaploidy in the stem lineage of core eudicots: significance for MADS-box gene and species diversification
Q37242488Gamma-MYN: a new algorithm for estimating Ka and Ks with consideration of variable substitution rates
Q51285110Gating of the two-pore cation channel AtTPC1 in the plant vacuole is based on a single voltage-sensing domain.
Q46378780GenScalpel: an application for sequence retrieval and extraction from the GenBank flatfile
Q64092174GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes
Q46613613Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms.
Q42363797Gene Duplication Analysis Reveals No Ancient Whole Genome Duplication but Extensive Small-Scale Duplications during Genome Evolution and Adaptation of Schistosoma mansoni
Q37231243Gene Expression Profiling in the Hibernating Primate, Cheirogaleus Medius.
Q52360024Gene Golden Age paradox and its partial solution.
Q22065589Gene Transfer from Bacteria and Archaea Facilitated Evolution of an Extremophilic Eukaryote
Q40050514Gene Tree Affects Inference of Sites Under Selection by the Branch-Site Test of Positive Selection
Q46488833Gene Tree Discordance Can Generate Patterns of Diminishing Convergence over Time
Q39958900Gene Tree Discordance Causes Apparent Substitution Rate Variation
Q33611013Gene co-expression network connectivity is an important determinant of selective constraint
Q35084839Gene coexpression networks reveal key drivers of phenotypic divergence in porcine muscle
Q93083302Gene connectivity and enzyme evolution in the human metabolic network
Q51827237Gene conversion among paralogs results in moderate false detection of positive selection using likelihood methods.
Q46445008Gene conversion and positive selection driving the evolution of the Caenorhabditis ssp. ZIM/HIM-8 protein family
Q33372941Gene conversion and purifying selection of a placenta-specific ERV-V envelope gene during simian evolution
Q46846337Gene conversions are frequent but not under positive selection in the Siglec gene families of primates
Q45207061Gene conversions are under purifying selection in the carcinoembryonic antigen immunoglobulin gene families of primates
Q28709588Gene copy number variation and its significance in cyanobacterial phylogeny
Q34081810Gene decay in Shigella as an incipient stage of host-adaptation
Q34116949Gene discovery in the threatened elkhorn coral: 454 sequencing of the Acropora palmata transcriptome
Q33447915Gene discovery using massively parallel pyrosequencing to develop ESTs for the flesh fly Sarcophaga crassipalpis.
Q87822796Gene duplicates resolving sexual conflict rapidly evolved essential gametogenesis functions
Q34146891Gene duplication and an accelerated evolutionary rate in 11S globulin genes are associated with higher protein synthesis in dicots as compared to monocots
Q34905508Gene duplication and fragment recombination drive functional diversification of a superfamily of cytoplasmic effectors in Phytophthora sojae.
Q33548504Gene duplication and fragmentation in the zebra finch major histocompatibility complex.
Q51418822Gene duplication and positive selection explains unusual physiological roles of the relaxin gene in the European rabbit.
Q110697356Gene duplication and rate variation in the evolution of plastid ACCase and Clp genes in angiosperms
Q61806502Gene duplication and relaxation from selective constraints of GCYC genes correlated with various floral symmetry patterns in Asiatic Gesneriaceae tribe Trichosporeae
Q36368179Gene duplication and the evolution of hemoglobin isoform differentiation in birds.
Q46311528Gene duplication and the evolution of phenotypic diversity in insect societies
Q38785709Gene duplication leads to altered membrane topology of a cytochrome P450 enzyme in seed plants
Q58037418Gene exchange drives the ecological success of a multi-host bacterial pathogen
Q38662093Gene expression is more strongly influenced by age than caste in the ant Lasius niger.
Q90136336Gene expression vs. sequence divergence: comparative transcriptome sequencing among natural Rhinolophus ferrumequinum populations with different acoustic phenotypes
Q38698957Gene flow and selection interact to promote adaptive divergence in regions of low recombination.
Q37295977Gene flow between Drosophila yakuba and Drosophila santomea in subunit V of cytochrome c oxidase: A potential case of cytonuclear cointrogression
Q28714187Gene flow networks among American Aedes aegypti populations
Q40518871Gene flow, recombination, and positive selection in Stenotrophomonas maltophilia: mechanisms underlying the diversity of the widespread opportunistic pathogen.
Q41873834Gene flow, recombination, and selection in cyanobacteria: population structure of geographically related Planktothrix freshwater strains.
Q35213313Gene loss rather than gene gain is associated with a host jump from monocots to dicots in the Smut Fungus Melanopsichium pennsylvanicum
Q28606743Gene loss, adaptive evolution and the co-evolution of plumage coloration genes with opsins in birds
Q34620155Gene structure, regulatory control, and evolution of black widow venom latrotoxins.
Q34280258Gene transfer agents: phage-like elements of genetic exchange
Q83617065Gene turnover and differential retention in the relaxin/insulin-like gene family in primates
Q28651012Gene turnover in the avian globin gene families and evolutionary changes in hemoglobin isoform expression
Q37176337General gene movement off the X chromosome in the Drosophila genus
Q42611740Generalist species drive microbial dispersion and evolution
Q60531261Genes Devoid of Full-Length Transposable Element Insertions are Involved in Development and in the Regulation of Transcription in Human and Closely Related Species
Q60053816Genes Encoding Mammalian Oviductal Proteins Involved in Fertilization are Subjected to Gene Death and Positive Selection
Q37231257Genes Translocated into the Plastid Inverted Repeat Show Decelerated Substitution Rates and Elevated GC Content
Q44949098Genes and evolution of two-domain toxins from lynx spider venom
Q33909381Genes in the terminal regions of orthopoxvirus genomes experience adaptive molecular evolution
Q34938028Genes involved in convergent evolution of eusociality in bees
Q33359300Genes involved in floral meristem in tomato exhibit drastically reduced genetic diversity and signature of selection.
Q28710391Genes involved in the evolution of herbivory by a leaf-mining, Drosophilid fly
Q36789184Genetic Adaptation of Giant Lobelias (Lobelia aberdarica and Lobelia telekii) to Different Altitudes in East African Mountains
Q36283631Genetic Adaptation of Schizothoracine Fish to the Phased Uplifting of the Qinghai-Tibetan Plateau
Q90407940Genetic Adaptations of an Island Pit-Viper to a Unique Sedentary Life with Extreme Seasonal Food Availability
Q55464850Genetic Analyses of Elys Mutations in Drosophila Show Maternal-Effect Lethality and Interactions with Nucleoporin Genes.
Q58777192Genetic Analysis of Floral Symmetry Transition in African Violet Suggests the Involvement of Trans-acting Factor for Expression Shifts
Q34534392Genetic Codes with No Dedicated Stop Codon: Context-Dependent Translation Termination
Q40936318Genetic Determinism and Evolutionary Reconstruction of a Host Jump in a Plant Virus
Q62570642Genetic Diversity and Gene Family Expansions in Members of the Genus Entamoeba
Q38847180Genetic Stability and Evolution of the sigB Allele, Used for Listeria Sensu Stricto Subtyping and Phylogenetic Inference
Q47686678Genetic Structure of the Bacterial Endosymbiont Buchnera aphidicola from Its Host Aphid Schlechtendalia chinensis and Evolutionary Implications
Q35892724Genetic Variation at Exon 2 of the MHC Class II DQB Locus in Blue Whale (Balaenoptera musculus) from the Gulf of California
Q36123848Genetic Variation of Goat Interferon Regulatory Factor 3 Gene and Its Implication in Goat Evolution
Q35851322Genetic adaptations of the plateau zokor in high-elevation burrows
Q30356198Genetic analyses of bone morphogenetic protein 2, 4 and 7 in congenital combined pituitary hormone deficiency.
Q35845748Genetic and epigenetic architecture of sex-biased expression in the jewel wasps Nasonia vitripennis and giraulti
Q33818062Genetic and evolutionary analyses of the human bone morphogenetic protein receptor 2 (BMPR2) in the pathophysiology of obesity
Q30654468Genetic and physiological data suggest demographic and adaptive responses in complex interactions between populations of figs (Ficus pumila) and their pollinating wasps (Wiebesia pumilae).
Q46380435Genetic basis for soma is present in undifferentiated volvocine green algae
Q41558702Genetic basis of brain size evolution in cetaceans: insights from adaptive evolution of seven primary microcephaly (MCPH) genes.
Q45366618Genetic characterization and evolutionary analysis of 4 Newcastle disease virus isolate full genomes from waterbirds in South China during 2003-2007.
Q84315388Genetic characterization of bovine coronavirus in Vietnam
Q42239946Genetic characterization of porcine circovirus type 2 in the Korean wild boar population
Q34292712Genetic characterization of seasonal influenza A (H3N2) viruses in Ontario during 2010-2011 influenza season: high prevalence of mutations at antigenic sites
Q57050511Genetic conflicts with Plasmodium parasites and functional constraints shape the evolution of erythrocyte cytoskeletal proteins
Q36445279Genetic correlates of the evolving primate brain.
Q33694743Genetic degeneration of old and young Y chromosomes in the flowering plant Rumex hastatulus
Q57295529Genetic dissection of interspecific differences in yeast thermotolerance
Q35099359Genetic dissection of vitamin E biosynthesis in tomato.
Q36106525Genetic diversity and evolutionary insights of respiratory syncytial virus A ON1 genotype: global and local transmission dynamics
Q54243881Genetic diversity and molecular evolution of Ornithogalum mosaic virus based on the coat protein gene sequence.
Q40982448Genetic diversity and molecular evolution of arabis mosaic virus based on the CP gene sequence
Q67223635Genetic diversity and origin of the feral horses in Theodore Roosevelt National Park
Q64948134Genetic diversity of CHC22 clathrin impacts its function in glucose metabolism.
Q36181126Genetic diversity of MHC class I loci in six non-model frogs is shaped by positive selection and gene duplication
Q59358302Genetic diversity of and genes of caprine MHC class II in Sirohi goat
Q33533686Genetic diversity of the Plasmodium vivax merozoite surface protein-5 locus from diverse geographic origins
Q33545433Genetic diversity, molecular phylogeny and selection evidence of the silkworm mitochondria implicated by complete resequencing of 41 genomes.
Q102154434Genetic drift and bottleneck do not influence diversity in Toll-like receptor genes at a small spatial scale in a Himalayan passerine
Q51420263Genetic drift and mutational hazard in the evolution of salamander genomic gigantism.
Q35766256Genetic drift of human coronavirus OC43 spike gene during adaptive evolution
Q35908103Genetic evidence for contribution of human dispersal to the genetic diversity of EBA-175 in Plasmodium falciparum
Q36523991Genetic evolution of the neuraminidase of influenza A (H3N2) viruses from 1968 to 2009 and its correspondence to haemagglutinin evolution
Q96822531Genetic factors for short life span associated with evolution of the loss of flight ability
Q28830047Genetic linkage of distinct adaptive traits in sympatrically speciating crater lake cichlid fish
Q33942358Genetic mechanisms involved in the evolution of the cephalopod camera eye revealed by transcriptomic and developmental studies
Q28651565Genetic recapitulation of human pre-eclampsia risk during convergent evolution of reduced placental invasiveness in eutherian mammals
Q35787260Genetic responses to seasonal variation in altitudinal stress: whole-genome resequencing of great tit in eastern Himalayas
Q36156361Genetic signals of high-altitude adaptation in amphibians: a comparative transcriptome analysis
Q31155781Genetic signatures for enhanced olfaction in the African mole-rats
Q28635994Genetic signatures of adaptation revealed from transcriptome sequencing of Arctic and red foxes
Q52673241Genetic signatures of microbial altruism and cheating in social amoebas in the wild.
Q51596377Genetic structure of marine Borrelia garinii and population admixture with the terrestrial cycle of Lyme borreliosis.
Q38863977Genetic variability and evolutionary implications of RNA silencing suppressor genes in RNA1 of sweet potato chlorotic stunt virus isolates infecting sweetpotato and related wild species.
Q59357470Genetic variability and lineage phylogeny of human papillomavirus type 45 based on E6 and E7 genes in Southwest China
Q31053964Genetic variability and potential recombination events in the HC-Pro gene of sugarcane streak mosaic virus
Q34571650Genetic variability in L1 and L2 genes of HPV-16 and HPV-58 in Southwest China
Q28730883Genetic variability of human respiratory syncytial virus A strains circulating in Ontario: a novel genotype with a 72 nucleotide G gene duplication
Q42371793Genetic variants affecting equivalent protein family positions reflect human diversity.
Q92786368Genetic variation at MHC class II loci influences both olfactory signals and scent discrimination in ring-tailed lemurs
Q37506140Genetic variation at aryl hydrocarbon receptor (AHR) loci in populations of Atlantic killifish (Fundulus heteroclitus) inhabiting polluted and reference habitats
Q36702513Genetic variation at the MHC DRB1 locus is similar across Gunnison's prairie dog (Cynomys gunnisoni) colonies regardless of plague history
Q36105274Genetic variation in Mycobacterium tuberculosis isolates from a London outbreak associated with isoniazid resistance
Q35023072Genetic variation of the major histocompatibility complex (MHC class II B gene) in the threatened Hume's pheasant, Syrmaticus humiae
Q42372671Genetic wealth, population health: Major histocompatibility complex variation in captive and wild ring-tailed lemurs (Lemur catta).
Q38431600Genetics of Cerebellar and Neocortical Expansion in Anthropoid Primates: A Comparative Approach
Q61445066GenoDup Pipeline: a tool to detect genome duplication using the dS-based method
Q92410184Genome Analysis of Hypomyces perniciosus, the Causal Agent of Wet Bubble Disease of Button Mushroom (Agaricus bisporus)
Q91735408Genome Assembly and Analysis of the North American Mountain Goat (Oreamnos americanus) Reveals Species-Level Responses to Extreme Environments
Q37293373Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides
Q36017335Genome Evolution and Innovation across the Four Major Lineages of Cryptococcus gattii
Q28821773Genome Evolution in Three Species of Cactophilic Drosophila
Q41740946Genome Evolution in the Obligate but Environmentally Active Luminous Symbionts of Flashlight Fish
Q38811021Genome Mutational and Transcriptional Hotspots Are Traps for Duplicated Genes and Sources of Adaptations.
Q58702706Genome Plasticity of -Defective Staphylococcus aureus during Clinical Infection
Q36504026Genome Sequence and Analysis of Peptoclostridium difficile Strain ZJCDC-S82.
Q61805946Genome Sequence of Jaltomata Addresses Rapid Reproductive Trait Evolution and Enhances Comparative Genomics in the Hyper-Diverse Solanaceae
Q57072628Genome Sequence of Peacock Reveals the Peculiar Case of a Glittering Bird
Q55309368Genome Sequence of the Freshwater Yangtze Finless Porpoise.
Q53682454Genome Sequences of Akhmeta Virus, an Early Divergent Old World Orthopoxvirus.
Q64077163Genome Sequencing Illustrates the Genetic Basis of the Pharmacological Properties of
Q91721095Genome Sequencing of Pleurozium schreberi: The Assembled and Annotated Draft Genome of a Pleurocarpous Feather Moss
Q64250208Genome Sequencing of Provides Insights into the Evolution and Pathogenic Mechanisms of the Cobweb Disease Pathogen on Cultivated Mushroom
Q55085672Genome Size, Molecular Phylogeny, and Evolutionary History of the Tribe Aquilarieae (Thymelaeaceae), the Natural Source of Agarwood.
Q57091716Genome Variation in the Model Halophilic Bacterium
Q34440650Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen
Q34680844Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustorial expressed secreted proteins as candidate effectors.
Q36196342Genome analysis of orf virus isolates from goats in the Fujian Province of southern China
Q34594805Genome analysis of the first Marseilleviridae representative from Australia indicates that most of its genes contribute to virus fitness
Q53076289Genome and evolution of the shade-requiring medicinal herb Panax ginseng.
Q49244125Genome and secretome analysis of Pochonia chlamydosporia provide new insight into egg-parasitic mechanisms.
Q67228962Genome and transcriptome evolve separately in recently hybridized fungi
Q21266645Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef)
Q33572055Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce
Q35068373Genome comparison of two Magnaporthe oryzae field isolates reveals genome variations and potential virulence effectors
Q24608507Genome degeneration and adaptation in a nascent stage of symbiosis
Q28744354Genome digging: insight into the mitochondrial genome of Homo
Q34366790Genome diversity and divergence in Drosophila mauritiana: multiple signatures of faster X evolution
Q28655486Genome duplication and gene loss affect the evolution of heat shock transcription factor genes in legumes
Q57721961Genome evolution across 1,011 Saccharomyces cerevisiae isolates
Q24610414Genome evolution and phylogenomic analysis of Candidatus Kinetoplastibacterium, the betaproteobacterial endosymbionts of Strigomonas and Angomonas
Q37661372Genome evolution in the primary endosymbiont of whiteflies sheds light on their divergence
Q36322468Genome evolutionary dynamics followed by diversifying selection explains the complexity of the Sesamum indicum genome.
Q90402087Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery
Q46411478Genome interplay in the grain transcriptome of hexaploid bread wheat
Q28744447Genome networks root the tree of life between prokaryotic domains
Q64072624Genome of , a close relative of , shows ecological adaptation to high altitude
Q92373478Genome of Alaskapox Virus, A Novel Orthopoxvirus Isolated from Alaska
Q36735940Genome of Leptomonas pyrrhocoris: a high-quality reference for monoxenous trypanosomatids and new insights into evolution of Leishmania.
Q90439987Genome of Spea multiplicata, a Rapidly Developing, Phenotypically Plastic, and Desert-Adapted Spadefoot Toad
Q89810210Genome of Tripterygium wilfordii and identification of cytochrome P450 involved in triptolide biosynthesis
Q64113076Genome of lethal Lepiota venenata and insights into the evolution of toxin-biosynthetic genes
Q42988951Genome of the Chinese tree shrew
Q55885822Genome of the Tasmanian tiger provides insights into the evolution and demography of an extinct marsupial carnivore
Q34333179Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment
Q92885747Genome of the tropical plant Marchantia inflexa: implications for sex chromosome evolution and dehydration tolerance
Q90402682Genome of the webworm Hyphantria cunea unveils genetic adaptations supporting its rapid invasion and spread
Q60930418Genome rearrangements and selection in multi-chromosome bacteria Burkholderia spp
Q37408639Genome sequence and analysis of the Japanese morning glory Ipomoea nil.
Q96127546Genome sequence and comparative analysis of reindeer (Rangifer tarandus) in northern Eurasia
Q39064071Genome sequence and genetic diversity of European ash trees.
Q30459161Genome sequence and genetic diversity of the common carp, Cyprinus carpio
Q90462854Genome sequence and genetic transformation of a widely distributed and cultivated poplar
Q90612603Genome sequence of Jatropha curcas L., a non-edible biodiesel plant, provides a resource to improve seed-related traits
Q96302480Genome sequence of Kobresia littledalei, the first chromosome-level genome in the family Cyperaceae
Q64247029Genome sequence of Malania oleifera, a tree with great value for nervonic acid production
Q24564236Genome sequence of ground tit Pseudopodoces humilis and its adaptation to high altitude
Q90095634Genome sequence of the Chinese white wax scale insect Ericerus pela: the first draft genome for the Coccidae family of scale insects
Q89968499Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family
Q28597734Genome sequence of the basal haplorrhine primate Tarsius syrichta reveals unusual insertions
Q22122071Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species
Q36219076Genome sequence, population history, and pelage genetics of the endangered African wild dog (Lycaon pictus).
Q28710411Genome sequences of wild and domestic bactrian camels
Q28740825Genome sequences reveal divergence times of malaria parasite lineages
Q38153983Genome sequencing and population genomics in non-model organisms
Q40313685Genome sequencing of an Indian peste des petits ruminants virus isolate, Izatnagar/94, and its implications for virus diversity, divergence and phylogeography
Q33742120Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis
Q41704710Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination
Q33785917Genome sequencing of the sweetpotato whitefly Bemisia tabaci MED/Q
Q64974088Genome sequencing provides insights into the evolution and antioxidant activity of Chinese bayberry.
Q28658391Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus
Q52590862Genome wide analysis of the transition to pathogenic lifestyles in Magnaporthales fungi.
Q33736594Genome-Wide Analyses Reveal Genes Subject to Positive Selection in Pasteurella multocida
Q58758232Genome-Wide Analysis Elucidates the Role of Genes in Stress Responses of Cotton
Q36775971Genome-Wide Analysis Indicates Lineage-Specific Gene Loss during Papilionoideae Evolution
Q33799774Genome-Wide Analysis Suggests the Relaxed Purifying Selection Affect the Evolution of WOX Genes in Pyrus bretschneideri, Prunus persica, Prunus mume, and Fragaria vesca.
Q35826155Genome-Wide Analysis in Three Fusarium Pathogens Identifies Rapidly Evolving Chromosomes and Genes Associated with Pathogenicity.
Q64065824Genome-Wide Analysis of Multiple Organellar RNA Editing Factor Family in Poplar Reveals Evolution and Roles in Drought Stress
Q37471294Genome-Wide Analysis of Soybean JmjC Domain-Containing Proteins Suggests Evolutionary Conservation Following Whole-Genome Duplication
Q64998288Genome-Wide Analysis of WRKY Genes and Their Response to Hormone and Mechanic Stresses in Carrot.
Q50055197Genome-Wide Analysis of the NF-YB Gene Family in Gossypium hirsutum L. and Characterization of the Role of GhDNF-YB22 in Embryogenesis.
Q33608488Genome-Wide Analysis of the Sucrose Synthase Gene Family in Grape (Vitis vinifera): Structure, Evolution, and Expression Profiles
Q33715690Genome-Wide Characterization and Expression Profiling of Sugar Transporter Family in the Whitefly, Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae).
Q28550234Genome-Wide Comparative Analysis of Chemosensory Gene Families in Five Tsetse Fly Species
Q92003747Genome-Wide Comprehensive Analysis of the SABATH Gene Family in Arabidopsis and Rice
Q47282749Genome-Wide Comprehensive Analysis the Molecular Phylogenetic Evaluation and Tissue-Specific Expression of SABATH Gene Family in Salvia miltiorrhiza
Q36249670Genome-Wide Convergence during Evolution of Mangroves from Woody Plants.
Q37625448Genome-Wide Dissection of the Heat Shock Transcription Factor Family Genes in Arachis
Q40830803Genome-Wide Function, Evolutionary Characterization and Expression Analysis of Sugar Transporter Family Genes in Pear (Pyrus bretschneideri Rehd).
Q90640596Genome-Wide Identification and Characterization of Aquaporins and Their Role in the Flower Opening Processes in Carnation (Dianthus caryophyllus)
Q41684646Genome-Wide Identification and Characterization of BrrTCP Transcription Factors in Brassica rapa ssp. rapa
Q36837389Genome-Wide Identification and Characterization of WRKY Gene Family in Peanut
Q64064019Genome-Wide Identification and Characterization of the Gene Family in Reveals Gene Duplication and Functional Divergence
Q36534846Genome-Wide Identification and Comparative Analysis of Cytosine-5 DNA Methyltransferase and Demethylase Families in Wild and Cultivated Peanut
Q37293206Genome-Wide Identification and Evolution Analysis of Trehalose-6-Phosphate Synthase Gene Family in Nelumbo nucifera
Q33881827Genome-Wide Identification and Functional Analysis of the Calcineurin B-like Protein and Calcineurin B-like Protein-Interacting Protein Kinase Gene Families in Turnip (Brassica rapa var. rapa).
Q36205240Genome-Wide Identification of Genes Probably Relevant to the Uniqueness of Tea Plant (Camellia sinensis) and Its Cultivars
Q64230061Genome-Wide Identification of Papain-Like Cysteine Proteases in and Functional Characterization in Response to
Q35782981Genome-Wide Identification of the Invertase Gene Family in Populus
Q38908715Genome-Wide Identification, Evolution and Functional Divergence of MYB Transcription Factors in Chinese White Pear (Pyrus bretschneideri).
Q58723162Genome-Wide Identification, Molecular Evolution, and Expression Divergence of Aluminum-Activated Malate Transporters in Apples
Q37716799Genome-Wide Investigation of WRKY Transcription Factors Involved in Terminal Drought Stress Response in Common Bean
Q50196158Genome-Wide Study of YABBY Genes in Upland Cotton and Their Expression Patterns under Different Stresses.
Q28818502Genome-Wide Survey Reveals Transcriptional Differences Underlying the Contrasting Trichome Phenotypes of Two Sister Desert Poplars
Q102152167Genome-enabled discovery of anthraquinone biosynthesis in Senna tora
Q26991993Genome-scale analysis of demographic history and adaptive selection
Q41924621Genome-scale detection of positive selection in nine primates predicts human-virus evolutionary conflicts
Q33990566Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates
Q36343859Genome-wide Annotation and Comparative Analysis of Long Terminal Repeat Retrotransposons between Pear Species of P. bretschneideri and P. Communis
Q33837261Genome-wide Identification and Expression Analysis of Amino Acid Transporters in the Whitefly, Bemisia tabaci (Gennadius).
Q35923761Genome-wide Identification of WRKY Genes in the Desert Poplar Populus euphratica and Adaptive Evolution of the Genes in Response to Salt Stress
Q57791795Genome-wide Identification, Classification, Molecular Evolution and Expression Analysis of Malate Dehydrogenases in Apple
Q98225821Genome-wide adaptive evolution to underground stresses in subterranean mammals: Hypoxia adaption, immunity promotion, and sensory specialization
Q36985095Genome-wide analyses of Geraniaceae plastid DNA reveal unprecedented patterns of increased nucleotide substitutions
Q64963666Genome-wide analyses of the bHLH gene family reveals structural and functional characteristics in the aquatic plant Nelumbo nucifera.
Q91344545Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot
Q35863021Genome-wide analysis of MAPKKKs shows expansion and evolution of a new MEKK class involved in solanaceous species sexual reproduction
Q33827447Genome-wide analysis of UDP-glycosyltransferase super family in Brassica rapa and Brassica oleracea reveals its evolutionary history and functional characterization
Q33882599Genome-wide analysis of WOX genes in upland cotton and their expression pattern under different stresses.
Q34034250Genome-wide analysis of WRKY gene family in Cucumis sativus
Q89810494Genome-wide analysis of WRKY transcription factors in Aquilaria sinensis (Lour.) Gilg
Q35878487Genome-wide analysis of WRKY transcription factors in white pear (Pyrus bretschneideri) reveals evolution and patterns under drought stress
Q33359848Genome-wide analysis of adaptive molecular evolution in the carnivorous plant Utricularia gibba.
Q36416796Genome-wide analysis of excretory/secretory proteins in Echinococcus multilocularis: insights into functional characteristics of the tapeworm secretome.
Q58782098Genome-wide analysis of purple acid phosphatase structure and expression in ten vegetable species
Q35004742Genome-wide analysis of selective constraints on high stability regions of mRNA reveals multiple compensatory mutations in Escherichia coli
Q37548535Genome-wide analysis of soybean HD-Zip gene family and expression profiling under salinity and drought treatments
Q28730772Genome-wide analysis of syntenic gene deletion in the grasses
Q38928734Genome-wide analysis of the IQD gene family in maize
Q37472742Genome-wide analysis of the MADS-box gene family in Brachypodium distachyon
Q35195697Genome-wide analysis of the NADK gene family in plants
Q47126886Genome-wide analysis of the Solanum tuberosum (potato) trehalose-6-phosphate synthase (TPS) gene family: evolution and differential expression during development and stress
Q64988360Genome-wide analysis of the WRKY gene family in drumstick (Moringa oleifera Lam.).
Q33925373Genome-wide analysis of wild-type Epstein-Barr virus genomes derived from healthy individuals of the 1,000 Genomes Project
Q28648066Genome-wide analysis reveals diverged patterns of codon bias, gene expression, and rates of sequence evolution in picea gene families
Q39512366Genome-wide analysis suggests divergent evolution of lipid phosphotases/phosphotransferase genes in plants
Q33611120Genome-wide and molecular evolution analyses of the phospholipase D gene family in Poplar and Grape
Q36209349Genome-wide and molecular evolution analysis of the Poplar KT/HAK/KUP potassium transporter gene family
Q42224636Genome-wide characterization of the Rab gene family in Gossypium by comparative analysis
Q60932388Genome-wide characterization, evolutionary analysis of WRKY genes in Cucurbitaceae species and assessment of its roles in resisting to powdery mildew disease
Q34466413Genome-wide classification and evolutionary and expression analyses of citrus MYB transcription factor families in sweet orange
Q33559004Genome-wide comparative analysis of NBS-encoding genes between Brassica species and Arabidopsis thaliana
Q28749751Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication
Q35587287Genome-wide comparative analysis reveals similar types of NBS genes in hybrid Citrus sinensis genome and original Citrus clementine genome and provides new insights into non-TIR NBS genes
Q64054107Genome-wide comparison reveals divergence of cassava and rubber aquaporin family genes after the recent whole-genome duplication
Q96351890Genome-wide data reveal discordant mitonuclear introgression in the intermediate horseshoe bat (Rhinolophus affinis)
Q53486037Genome-wide discovery of DNA polymorphism in Brassica rapa.
Q44761567Genome-wide evidence for efficient positive and purifying selection in Capsella grandiflora, a plant species with a large effective population size
Q33958898Genome-wide evidence for positive selection and recombination in Actinobacillus pleuropneumoniae
Q28475165Genome-wide functional divergence after the symbiosis of proteobacteria with insects unraveled through a novel computational approach
Q28595962Genome-wide identification and characterization of WRKY gene family in Salix suchowensis
Q33437900Genome-wide identification and characterization of cytochrome P450 monooxygenase genes in the ciliate Tetrahymena thermophila.
Q97895383Genome-wide identification and characterization of nonspecific lipid transfer protein (nsLTP) genes in Arachis duranensis
Q90095436Genome-wide identification and characterization of the lateral organ boundaries domain gene family in Brassica rapa var. rapa
Q96680380Genome-wide identification and comparative analysis of the ADH gene family in Chinese white pear (Pyrus bretschneideri) and other Rosaceae species
Q35025659Genome-wide identification and comparative analysis of the heat shock transcription factor family in Chinese white pear (Pyrus bretschneideri) and five other Rosaceae species
Q40458373Genome-wide identification and evolution of HECT genes in soybean.
Q85895957Genome-wide identification and evolutionary analysis of positively selected miRNA genes in domesticated rice
Q39263388Genome-wide identification and evolutionary analysis of the SBP-box gene family in castor bean
Q61802094Genome-wide identification and expression analysis of expansin gene family in common wheat (Triticum aestivum L.)
Q44657895Genome-wide identification and transcription analysis of soybean carotenoid oxygenase genes during abiotic stress treatments
Q92151146Genome-wide identification of GhAAI genes reveals that GhAAI66 triggers a phase transition to induce early flowering
Q59340663Genome-wide identification of LRR-containing sequences and the response of these sequences to nematode infection in Arachis duranensis
Q90331688Genome-wide identification of MAPK cascade genes reveals the GhMAP3K14-GhMKK11-GhMPK31 pathway is involved in the drought response in cotton
Q37420683Genome-wide identification of NBS-encoding resistance genes in Brassica rapa
Q33582361Genome-wide identification of genes probably relevant to the adaptation of schizothoracins (Teleostei: Cypriniformes) to the uplift of the Qinghai-Tibet Plateau
Q91659462Genome-wide identification of the CLAVATA3/EMBRYO SURROUNDING REGION (CLE) family in grape (Vitis vinifera L.).
Q92605700Genome-wide identification, characterization and expression analysis of the HD-Zip gene family in the stem development of the woody plant Prunus mume
Q31003647Genome-wide identification, characterization and phylogenetic analysis of the rice LRR-kinases
Q35389924Genome-wide identification, classification, and expression analysis of 14-3-3 gene family in Populus
Q39502987Genome-wide identification, classification, and expression analysis of CDPK and its closely related gene families in poplar (Populus trichocarpa).
Q34168141Genome-wide identification, evolutionary expansion, and expression profile of homeodomain-leucine zipper gene family in poplar (Populus trichocarpa).
Q90178815Genome-wide identification, expression, and association analysis of the monosaccharide transporter (MST) gene family in peanut (Arachis hypogaea L.).
Q59790974Genome-wide identification, molecular evolution, and expression analysis of auxin response factor (ARF) gene family in Brachypodium distachyon L
Q51145923Genome-wide identification, putative functionality and interactions between lncRNAs and miRNAs in Brassica species.
Q36793127Genome-wide identification, structural analysis and new insights into late embryogenesis abundant (LEA) gene family formation pattern in Brassica napus
Q28297624Genome-wide influence of indel Substitutions on evolution of bacteria of the PVC superphylum, revealed using a novel computational method
Q46843106Genome-wide investigation and transcriptome analysis of the WRKY gene family in Gossypium
Q34625058Genome-wide investigation reveals high evolutionary rates in annual model plants
Q34471779Genome-wide scan for bats and dolphin to detect their genetic basis for new locomotive styles
Q30537456Genome-wide scans for candidate genes involved in the aquatic adaptation of dolphins.
Q33922755Genome-wide signals of positive selection in strongylocentrotid sea urchins.
Q38368515Genome-wide signatures of complex introgression and adaptive evolution in the big cats.
Q22122135Genome-wide signatures of convergent evolution in echolocating mammals
Q33903017Genome-wide survey indicates diverse physiological roles of the barley (Hordeum vulgare L.) calcium-dependent protein kinase genes
Q47094310Genome-wide survey indicates diverse physiological roles of the turnip (Brassica rapa var. rapa) calcium-dependent protein kinase genes
Q34196793Genomes in turmoil: quantification of genome dynamics in prokaryote supergenomes
Q47718434Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.
Q37313657Genomes of Ellobius species provide insight into the evolutionary dynamics of mammalian sex chromosomes
Q54203591Genomes of all known members of a Plasmodium subgenus reveal paths to virulent human malaria.
Q28649611Genomes of the rice pest brown planthopper and its endosymbionts reveal complex complementary contributions for host adaptation
Q58855329Genomes of trombidid mites reveal novel predicted allergens and laterally-transferred genes associated with secondary metabolism
Q59340433Genomes reveal marked differences in the adaptive evolution between orangutan species
Q39085809Genomewide analysis of NBS-encoding genes in kiwi fruit (Actinidia chinensis).
Q111629834Genome‐wide investigation and transcriptional profiling of the oxidosqualene cyclase ( OSC ) genes in wheat ( Triticum aestivum )
Q28603974Genomic Analyses Reveal Demographic History and Temperate Adaptation of the Newly Discovered Honey Bee Subspecies Apis mellifera sinisxinyuan n. ssp
Q38833446Genomic Analysis of Viral Outbreaks
Q28611281Genomic Analysis of an Ascomycete Fungus from the Rice Planthopper Reveals How It Adapts to an Endosymbiotic Lifestyle
Q46267383Genomic Comparisons Reveal Microevolutionary Differences in Mycobacterium abscessus Subspecies.
Q46264837Genomic Environment Impacts Color Vision Evolution in a Family with Visually Based Sexual Selection
Q27488304Genomic Epidemiology of a Dengue Virus Epidemic in Urban Singapore
Q40409023Genomic Foundation of Starch-to-Lipid Switch in Oleaginous Chlorella spp.
Q90289542Genomic Insights into the Adaptive Convergent Evolution
Q35859806Genomic Patterns of Positive Selection at the Origin of Rust Fungi
Q34793613Genomic Porosity between Invasive Chondrostoma nasus and Endangered Endemic Parachondrostoma toxostoma (Cyprinidae): The Evolution of MHC IIB Genes
Q93051905Genomic Sequencing of Phyllosticta citriasiana Provides Insight Into Its Conservation and Diversification With Two Closely Related Phyllosticta Species Associated With Citrus
Q90742029Genomic Signals of Adaptation towards Mutualism and Sociality in Two Ambrosia Beetle Complexes
Q28828400Genomic Signatures of Speciation in Sympatric and Allopatric Hawaiian Picture-Winged Drosophila
Q63649247Genomic Takeover by Transposable Elements in the Strawberry Poison Frog
Q55404486Genomic Variability among Field Isolates and Laboratory-Adapted Strains of Leptospira borgpetersenii Serovar Hardjo.
Q54015031Genomic adaptation to polyphagy and insecticides in a major East Asian noctuid pest.
Q98205251Genomic analyses of a livestock pest, the New World screwworm, find potential targets for genetic control programs
Q46386857Genomic analyses of primitive, wild and cultivated citrus provide insights into asexual reproduction
Q64066371Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selection
Q33546182Genomic analysis of expressed sequence tags in American black bear Ursus americanus
Q57133094Genomic analysis of reveals the evolutionary dynamics of sex-biased genes in a sequential hermaphrodite fish
Q46347845Genomic analysis of snub-nosed monkeys (Rhinopithecus) identifies genes and processes related to high-altitude adaptation
Q34916668Genomic analysis of the Kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease
Q33686643Genomic analysis of the emergence of 20th century epidemic dysentery.
Q90669501Genomic analysis of the four ecologically distinct cactus host populations of Drosophila mojavensis
Q64079879Genomic analysis on pygmy hog reveals extensive interbreeding during wild boar expansion
Q28598000Genomic analysis reveals hidden biodiversity within colugos, the sister group to primates
Q100307266Genomic and experimental data provide new insights into luciferin biosynthesis and bioluminescence evolution in fireflies
Q57298217Genomic and functional evidence reveals molecular insights into the origin of echolocation in whales
Q35533902Genomic and network patterns of schizophrenia genetic variation in human evolutionary accelerated regions
Q37664067Genomic and population-level effects of gene conversion in caenorhabditis paralogs
Q59808884Genomic and transcriptomic comparisons of closely related malaria parasites differing in virulence and sequestration pattern
Q34984553Genomic and transcriptomic differences in community acquired methicillin resistant Staphylococcus aureus USA300 and USA400 strains.
Q91717535Genomic and transcriptomic insights into molecular basis of sexually dimorphic nuptial spines in Leptobrachium leishanense
Q91943158Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity
Q28817599Genomic and transcriptomic resources for assassin flies including the complete genome sequence of Proctacanthus coquilletti (Insecta: Diptera: Asilidae) and 16 representative transcriptomes
Q116206091Genomic assessment of the Phyllodactylus tuberculosus complex (Reptilia: Phyllodactylidae) in America
Q34768275Genomic basis of ecological niche divergence among cryptic sister species of non-biting midges
Q33707536Genomic changes associated with the evolutionary transition of an insect gut symbiont into a blood-borne pathogen.
Q51146718Genomic changes associated with the evolutionary transitions of Nostoc to a plant symbiont.
Q35179628Genomic characteristics and environmental distributions of the uncultivated Far-T4 phages
Q41846876Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis
Q34266159Genomic characterization of the European sea bass Dicentrarchus labrax reveals the presence of a novel uncoupling protein (UCP) gene family member in the teleost fish lineage.
Q34258089Genomic characterization of the conditionally dispensable chromosome in Alternaria arborescens provides evidence for horizontal gene transfer
Q34649132Genomic comparison between Salmonella Gallinarum and Pullorum: differential pseudogene formation under common host restriction
Q46498170Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments
Q46263453Genomic data from arthropods reveal high conservation but divergent evolutionary pattern of Polycomb/Trithorax group genes in arthropods.
Q42245496Genomic determinants of protein evolution and polymorphism in Arabidopsis.
Q34477506Genomic differentiation between temperate and tropical Australian populations of Drosophila melanogaster
Q28658739Genomic divergence between nine- and three-spined sticklebacks
Q42376120Genomic divergence within non-photosynthetic cyanobacterial endosymbionts in rhopalodiacean diatoms
Q28284688Genomic diversity and evolution of the head crest in the rock pigeon
Q64125100Genomic diversity and recombination among subspecies
Q42008601Genomic diversity of Bombyx mori nucleopolyhedrovirus strains
Q60300321Genomic effects of population collapse in a critically endangered ironwood tree Ostrya rehderiana
Q30357396Genomic epidemiology of Vibrio cholerae O1 associated with floods, Pakistan, 2010.
Q33994854Genomic evidence for adaptation by gene duplication.
Q36440506Genomic evidence for elevated mutation rates in highly expressed genes
Q54977393Genomic evidence for genes encoding leucine-rich repeat receptors linked to resistance against the eukaryotic extra- and intracellular Brassica napus pathogens Leptosphaeria maculans and Plasmodiophora brassicae.
Q93172807Genomic evidence of neo-sex chromosomes in the eastern yellow robin
Q38368211Genomic evidence reveals a radiation of placental mammals uninterrupted by the KPg boundary
Q50278718Genomic evolution, recombination, and inter-strain diversity of chelonid alphaherpesvirus 5 from Florida and Hawaii green sea turtles with fibropapillomatosis.
Q91818453Genomic features and evolution of the conditionally dispensable chromosome in the tangerine pathotype of Alternaria alternata
Q30408281Genomic heterogeneity and ecological speciation within one subspecies of Bacillus subtilis
Q34744011Genomic identification and characterization of the pseudoautosomal region in highly differentiated avian sex chromosomes
Q61136073Genomic inference of the metabolism and evolution of the archaeal phylum Aigarchaeota
Q58748184Genomic insights into host adaptation between the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici) and the barley stripe rust pathogen (Puccinia striiformis f. sp. hordei)
Q91819120Genomic insights into mite phylogeny, fitness, development, and reproduction
Q55009774Genomic insights into natural selection in the common loon (Gavia immer): evidence for aquatic adaptation.
Q39198215Genomic insights into salt adaptation in a desert poplar
Q36577143Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis
Q42545987Genomic insights into the convergence and pathogenicity factors of Campylobacter jejuni and Campylobacter coli species
Q91452201Genomic landscape and genetic manipulation of the black soldier fly Hermetia illucens, a natural waste recycler
Q22000590Genomic legacy of the African cheetah, Acinonyx jubatus
Q35548782Genomic lineages of Rhizobium etli revealed by the extent of nucleotide polymorphisms and low recombination.
Q88558154Genomic organization and adaptive evolution of IGHC genes in marine mammals
Q30355829Genomic organization and differential signature of positive selection in the alpha and beta globin gene clusters in two cetacean species.
Q21284128Genomic organization and molecular phylogenies of the beta (beta) keratin multigene family in the chicken (Gallus gallus) and zebra finch (Taeniopygia guttata): implications for feather evolution
Q38368985Genomic regression of claw keratin, taste receptor and light-associated genes provides insights into biology and evolutionary origins of snakes
Q39781818Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation
Q46247518Genomic signature of highland adaptation in fish: a case study in Tibetan Schizothoracinae species
Q34917188Genomic signature of multidrug-resistant Salmonella enterica serovar typhi isolates related to a massive outbreak in Zambia between 2010 and 2012
Q103026350Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts
Q64097711Genomic signatures of G-protein-coupled receptor expansions reveal functional transitions in the evolution of cephalopod signal transduction
Q51139774Genomic signatures of adaptation to wine biological ageing conditions in biofilm-forming flor yeasts.
Q99603753Genomic signatures of coevolution between non-model mammals and parasitic roundworms
Q64882925Genomic signatures of heterokaryosis in the oomycete pathogen Bremia lactucae.
Q57083926Genomic signatures of mitonuclear coevolution across populations of Tigriopus californicus
Q33582797Genomic survey, characterization and expression profile analysis of the peptide transporter family in rice (Oryza sativa L.).
Q34071366Genomic transition to pathogenicity in chytrid fungi
Q36268123Genomic variation in natural populations of Drosophila melanogaster
Q30401214Genomic, Molecular Evolution, and Expression Analysis of Genes Encoding Putative Classical AGPs, Lysine-Rich AGPs, and AG Peptides in Brassica rapa
Q58748509Genomic, expressional, protein-protein interactional analysis of Trihelix transcription factor genes in Setaria italia and inference of their evolutionary trajectory
Q57092959Genomic, molecular evolution, and expression analysis of NOX genes in soybean (Glycine max)
Q35083730Genomic, regulatory and epigenetic mechanisms underlying duplicated gene evolution in the natural allotetraploid Oryza minuta
Q34025318Genomics and host specialization of honey bee and bumble bee gut symbionts
Q38458177Genomics of Adaptation to Multiple Concurrent Stresses: Insights from Comparative Transcriptomics of a Cichlid Fish from One of Earth's Most Extreme Environments, the Hypersaline Soda Lake Magadi in Kenya, East Africa.
Q35011134Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives
Q22065911Genomics of adaptation and speciation in cichlid fishes: recent advances and analyses in African and Neotropical lineages
Q35047581Genomics of ecological adaptation in cactophilic Drosophila.
Q118110165Genomics reveals broad hybridization in deeply divergent Palearctic grass and water snakes (Natrix spp.)
Q37206400Genotype-phenotype associations: substitution models to detect evolutionary associations between phenotypic variables and genotypic evolutionary rate
Q28601468Genus-Wide Comparative Genome Analyses of Colletotrichum Species Reveal Specific Gene Family Losses and Gains during Adaptation to Specific Infection Lifestyles
Q35833270Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin
Q99568928Genus-wide characterization of bumblebee genomes provides insights into their evolution and variation in ecological and behavioral traits
Q40937650Geographically driven adaptation of chilli veinal mottle virus revealed by genetic diversity analysis of the coat protein gene
Q90227530Giant tortoise genomes provide insights into longevity and age-related disease
Q34437895Gibbon genome and the fast karyotype evolution of small apes
Q28602475Giraffe genome sequence reveals clues to its unique morphology and physiology
Q64931523Global Rate Variation in Bony Vertebrates.
Q36171150Global biogeography of SAR11 marine bacteria
Q28831468Global deceleration of gene evolution following recent genome hybridizations in fungi
Q110697297Global dispersal and diversification in ground beetles of the subfamily Carabinae
Q37677294Global footprints of purifying selection on Toll-like receptor genes primarily associated with response to bacterial infections in humans
Q49805369Global identification, structural analysis and expression characterization of cytochrome P450 monooxygenase superfamily in rice.
Q92778061Global population genomics of the forest pathogen Dothistroma septosporum reveal chromosome duplications in high dothistromin-producing strains
Q55286493Glutamine 89 is a key residue in the allosteric modulation of human serine racemase activity by ATP.
Q28744147Gorgeous mosaic of mitochondrial genes created by horizontal transfer and gene conversion
Q92461635Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
Q24648217Gourds afloat: a dated phylogeny reveals an Asian origin of the gourd family (Cucurbitaceae) and numerous oversea dispersal events
Q34572872Gradual disintegration of the floral symmetry gene network is implicated in the evolution of a wind-pollination syndrome
Q37031955Gradual neofunctionalization in the convergent evolution of trichomonad lactate and malate dehydrogenases
Q98164471Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors
Q90717784Greater genetic and regulatory plasticity of retained duplicates in Epichloë endophytic fungi
Q34487966Greater prairie chickens have a compact MHC-B with a single class IA locus
Q48155197Green-shifting of SWS2A opsin sensitivity and loss of function of RH2-A opsin in flounders, genus Verasper.
Q92623503Greenlip Abalone (Haliotis laevigata) Genome and Protein Analysis Provides Insights into Maturation and Spawning
Q45984489Ground tit genome reveals avian adaptation to living at high altitudes in the Tibetan plateau.
Q49299086Growing old, yet staying young: The role of telomeres in bats' exceptional longevity.
Q48734074Growth hormone and insulin-like growth factor of naked carp (Gymnocypris przewalskii) in Lake Qinghai: expression in different water environments.
Q28740444Growth hormone-related genes from baboon (Papio hamadryas): Characterization, placental expression and evolutionary aspects
Q28741210H-bond network around retinal regulates the evolution of ultraviolet and violet vision
Q51782535H1N1 seasonal influenza virus evolutionary rate changed over time.
Q33760193H2A.Bbd: an X-chromosome-encoded histone involved in mammalian spermiogenesis
Q92624766HENA, heterogeneous network-based data set for Alzheimer's disease
Q36226856HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes
Q40140427HIV Progression Depends on Codon and Amino Acid Usage Profile of Envelope Protein and Associated Host-Genetic Influence.
Q34761249HIV-1 infected monozygotic twins: a tale of two outcomes
Q59359150HIV-2/SIV viral protein X counteracts HUSH repressor complex
Q57801286HaploJuice : accurate haplotype assembly from a pool of sequences with known relative concentrations
Q34714469Haplotype analysis of sucrose synthase gene family in three Saccharum species
Q45827577Haplotype variability and identification of new functional alleles at the Rdg2a leaf stripe resistance gene locus.
Q94461576Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
Q91269396Hepatitis B Virus: Alternative phylogenetic hypotheses and its impact on molecular evolution inferences
Q86708444Heterogeneity of dN/dS Ratios at the Classical HLA Class I Genes over Divergence Time and Across the Allelic Phylogeny
Q35856761Heterogeneous Evolution of HIV-1 CRF01_AE in Men Who Have Sex with Men (MSM) and Other Populations in China
Q35755091Heterogeneous natural selection on oxidative phosphorylation genes among fishes with extreme high and low aerobic performance
Q34165718Hidden diversity in honey bee gut symbionts detected by single-cell genomics
Q65002732Hidden genomic evolution in a morphospecies-The landscape of rapidly evolving genes in Tetrahymena.
Q48063165Hidden variability of floral homeotic B genes in Solanaceae provides a molecular basis for the evolution of novel functions
Q57790630Hierarchical Organization Endows the Kinase Domain with Regulatory Plasticity
Q56333605High adaptive variability and virus-driven selection on major histocompatibility complex (MHC) genes in invasive wild rabbits in Australia
Q30389370High amino acid diversity and positive selection at a putative coral immunity gene (tachylectin-2)
Q92963912High basal heat-shock protein expression in bats confers resistance to cellular heat/oxidative stress
Q33349625High divergence in primate-specific duplicated regions: human and chimpanzee chorionic gonadotropin beta genes
Q34328934High diversity at PRDM9 in chimpanzees and bonobos
Q35650498High genetic diversity in the endangered and narrowly distributed amphibian species Leptobrachium leishanense
Q34998089High intralocus variability and interlocus recombination promote immunological diversity in a minimal major histocompatibility system.
Q57061611High intraspecific diversity of Restorer-of-fertility-like genes in barley
Q38494582High levels of gene expression explain the strong evolutionary constraint of mitochondrial protein-coding genes
Q42628339High levels of genetic diversity in Nosema ceranae within Apis mellifera colonies
Q33789561High levels of nucleotide diversity and fast decline of linkage disequilibrium in rye (Secale cereale L.) genes involved in frost response
Q84703928High molecular diversity in the rhodopsin gene in closely related goby fishes: A role for visual pigments in adaptive speciation?
Q36905262High occurrence of functional new chimeric genes in survey of rice chromosome 3 short arm genome sequences
Q51740685High polymorphism in MHC-DRB genes in golden snub-nosed monkeys reveals balancing selection in small, isolated populations.
Q40880956High quality reference genome of drumstick tree (Moringa oleifera Lam.), a potential perennial crop
Q42706646High rate of adaptation of mammalian proteins that interact with Plasmodium and related parasites.
Q46273179High rate of translocation-based gene birth on the Drosophila Y chromosome
Q42744091High sensitivity to aligner and high rate of false positives in the estimates of positive selection in the 12 Drosophila genomes
Q33375030High-resolution mapping of expression-QTLs yields insight into human gene regulation
Q33840766High-resolution mapping reveals hundreds of genetic incompatibilities in hybridizing fish species.
Q39515886High-resolution transcript profiling of the atypical biotrophic interaction between Theobroma cacao and the fungal pathogen Moniliophthora perniciosa
Q55304325Higher Rates of Protein Evolution in the Self-Fertilizing Plant Arabidopsis thaliana than in the Out-Crossers Arabidopsis lyrata and Arabidopsis halleri.
Q34338739Higher frequency of intron loss from the promoter proximally paused genes of Drosophila melanogaster
Q90860005Higher-order epistasis shapes the fitness landscape of a xenobiotic-degrading enzyme
Q50080966Highly Expressed Genes Are Preferentially Co-Opted for C4 Photosynthesis.
Q92296296Highly accelerated rates of genomic rearrangements and nucleotide substitutions in plastid genomes of Passiflora subgenus Decaloba
Q35821753Highly divergent ancient gene families in metagenomic samples are compatible with additional divisions of life
Q35927008Highly dynamic exon shuffling in candidate pathogen receptors ... what if brown algae were capable of adaptive immunity?
Q91677383Highly thermostable carboxylic acid reductases generated by ancestral sequence reconstruction
Q41958749Highly variable recombinational landscape modulates efficacy of natural selection in birds
Q33690593HipHop interacts with HOAP and HP1 to protect Drosophila telomeres in a sequence-independent manner.
Q39945615Histone genes of the razor clam Solen marginatus unveil new aspects of linker histone evolution in protostomes.
Q36388493History cleans up messes: The impact of time in driving divergence and introgression in a tropical suture zone
Q37178780History of plastid DNA insertions reveals weak deletion and at mutation biases in angiosperm mitochondrial genomes.
Q36009961Holding it together: rapid evolution and positive selection in the synaptonemal complex of Drosophila
Q56383750Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat
Q89882289Holothurians have a reduced GPCR and odorant receptor-like repertoire compared to other echinoderms
Q47130754Homoeologous Recombination of the V1r1-V1r2 Gene Cluster of Pheromone Receptors in an Allotetraploid Lineage of Teleosts.
Q58580330Horizontal Gene Transfer in Five Parasite Plant Species in Orobanchaceae
Q89881609Horizontal Gene Transfer to a Defensive Symbiont with a Reduced Genome in a Multipartite Beetle Microbiome
Q28602981Horizontal Gene Transfers from Bacteria to Entamoeba Complex: A Strategy for Dating Events along Species Divergence
Q35874717Horizontal functional gene transfer from bacteria to fishes
Q35682388Horizontal gene transfer in an acid mine drainage microbial community
Q30275577Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation.
Q42577014Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus
Q28730775Horizontal transfer and death of a fungal secondary metabolic gene cluster
Q54990134Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus.
Q34154729Horizontal transfers and gene losses in the phospholipid pathway of bartonella reveal clues about early ecological niches
Q34997819Horizontally acquired divergent O-antigen contributes to escape from cross-immunity in the classical bordetellae
Q37136862Hormone-activated estrogen receptors in annelid invertebrates: implications for evolution and endocrine disruption
Q61135417Horse Y chromosome assembly displays unique evolutionary features and putative stallion fertility genes
Q28647254Horsetails Are Ancient Polyploids: Evidence from Equisetum giganteum
Q92127849Host plant adaptation in the polyphagous whitefly, Trialeurodes vaporariorum, is associated with transcriptional plasticity and altered sensitivity to insecticides
Q28834049Host specialization of the blast fungus Magnaporthe oryzae is associated with dynamic gain and loss of genes linked to transposable elements
Q30403402Host-pathogen o-methyltransferase similarity and its specific presence in highly virulent strains of Francisella tularensis suggests molecular mimicry
Q21145834Hotspots of biased nucleotide substitutions in human genes
Q28603640How and why overcome the impediments to resolution: lessons from rhinolophid and hipposiderid bats
Q92214845How conflict shapes evolution in poeciliid fishes
Q53972389How do seemingly non-vagile clades accomplish trans-marine dispersal? Trait and dispersal evolution in the landfowl (Aves: Galliformes).
Q37319186How do variable substitution rates influence Ka and Ks calculations?
Q28681285How to Make a Dolphin: Molecular Signature of Positive Selection in Cetacean Genome
Q28762018How to summarize estimates of ancestral divergence times
Q38799244Human Lineage-Specific Transcriptional Regulation through GA-Binding Protein Transcription Factor Alpha (GABPa).
Q33906285Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved
Q34407843Human immunodeficiency virus type-1 (HIV-1) continues to evolve in presence of broadly neutralizing antibodies more than ten years after infection
Q93018183Human metapneumovirus prevalence and patterns of subgroup persistence identified through surveillance of pediatric pneumonia hospital admissions in coastal Kenya, 2007-2016
Q35127778Human settlement history between Sunda and Sahul: a focus on East Timor (Timor-Leste) and the Pleistocenic mtDNA diversity
Q49808581Human-Specific Mutations and Positively Selected Sites in MARCO Confer Functional Changes.
Q91610680Human-specific mutations in VMAT1 confer functional changes and multi-directional evolution in the regulation of monoamine circuits
Q46044330Hundreds of Genes Experienced Convergent Shifts in Selective Pressure in Marine Mammals
Q57179241Hurdles in the evolutionary epidemiology of : Pseudogenes, incongruence between taxonomy and DNA sequence variants, and cryptic lineages
Q38826521Hybrid de novo genome assembly of the Chinese herbal fleabane Erigeron breviscapus.
Q30870960Hybrid dysfunction and physiological compensation in gene expression
Q37197966Hybridization and long-distance colonization at different time scales: towards resolution of long-term controversies in the sweet vernal grasses (Anthoxanthum).
Q51035887Hybridization and pre-zygotic reproductive barriers in Plasmodium.
Q42613375Hypothetical proteins present during recovery phase of radiation resistant bacterium Deinococcus radiodurans are under purifying selection
Q43462854Hypoxia tolerance, longevity and cancer-resistance in the mole rat Spalax - a liver transcriptomics approach
Q50074081Hypoxia-Inducible Factor-1α in Antarctic notothenioids contains a polyglutamine and glutamic acid insert that varies in length with phylogeny.
Q33390527IDEA: Interactive Display for Evolutionary Analyses
Q93193667IGFBP-rP1, a strongly conserved member of the androgenic hormone signalling pathway in Isopoda
Q33427610IMGD: an integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes
Q35347592IMPACT_S: integrated multiprogram platform to analyze and combine tests of selection
Q40675992INSECT PHYLOGENOMICS. Comment on "Phylogenomics resolves the timing and pattern of insect evolution".
Q35706398Identification and Characterization of a Novel Family of Cysteine-Rich Peptides (MgCRP-I) from Mytilus galloprovincialis
Q39824289Identification and Evolutionary Analysis of Potential Candidate Genes in a Human Eating Disorder
Q35748897Identification and analysis of retrogenes in the East Asian nematode Caenorhabditis sp. 5 genome
Q30496032Identification and characterisation of a novel immune-type receptor (NITR) gene cluster in the European sea bass, Dicentrarchus labrax, reveals recurrent gene expansion and diversification by positive selection
Q33778724Identification and characterization of seminal fluid proteins in the Asian tiger mosquito, Aedes albopictus
Q44864859Identification and characterization of suppressors of plant cell death (SPD) effectors from Magnaporthe oryzae.
Q42602553Identification and characterization of the major histocompatibility complex class II DQB (MhcMath-DQB1) alleles in Tibetan macaques (Macaca thibetana).
Q35020944Identification and characterization of transforming growth factor β induced gene (TGFBIG) from Branchiostoma belcheri: insights into evolution of TGFBI family
Q41199767Identification and evidence of positive selection upon resistance gene analogs in cotton (Gossypium hirsutum L.).
Q34711442Identification and evolution of an NFAT gene involving Branchiostoma belcheri innate immunity
Q91045126Identification and evolution of glucosinolate sulfatases in a specialist flea beetle
Q40792552Identification and expression dynamics of three WUSCHEL related homeobox 13 (WOX13) genes in peanut
Q46675539Identification and genome organization of saponin pathway genes from a wild crucifer, and their use for transient production of saponins in Nicotiana benthamiana
Q35930266Identification and properties of 1,119 candidate lincRNA loci in the Drosophila melanogaster genome
Q36096514Identification of 4CL Genes in Desert Poplars and Their Changes in Expression in Response to Salt Stress
Q35968859Identification of Allorecognition Loci in Neurospora crassa by Genomics and Evolutionary Approaches.
Q38598807Identification of Genes under Positive Selection Reveals Differences in Evolutionary Adaptation between Brown-Algal Species
Q64904407Identification of Histone H3 (HH3) Genes in Gossypium hirsutum Revealed Diverse Expression During Ovule Development and Stress Responses.
Q40437909Identification of New World Quails Susceptible to Infection with Avian Leukosis Virus Subgroup J.
Q35914382Identification of Owl Monkey CD4 Receptors Broadly Compatible with Early-Stage HIV-1 Isolates
Q36149936Identification of Position-Specific Correlations between DNA-Binding Domains and Their Binding Sites. Application to the MerR Family of Transcription Factors
Q90117776Identification of Shaker K+ channel family members in Rosaceae and a functional exploration of PbrKAT1
Q40895227Identification of a Highly Specific Isoflavone 7-O-glucosyltransferase in the soybean (Glycine max (L.) Merr.).
Q37714042Identification of amino acid changes that may have been critical for the genesis of A(H7N9) influenza viruses
Q37068526Identification of an overprinting gene in Merkel cell polyomavirus provides evolutionary insight into the birth of viral genes
Q28757524Identification of ancient remains through genomic sequencing
Q100385975Identification of ancient viruses from metagenomic data of the Jomon people
Q30660270Identification of differentially evolved genes: an alternative approach to detection of accelerated molecular evolution from genome-wide comparative data.
Q41201947Identification of dopamine receptors across the extant avian family tree and analysis with other clades uncovers a polyploid expansion among vertebrates
Q28304019Identification of evolutionarily conserved non-AUG-initiated N-terminal extensions in human coding sequences
Q92153132Identification of evolutionary and kinetic drivers of NAD-dependent signaling
Q33942051Identification of fast-evolving genes in the scleractinian coral Acropora using comparative EST analysis
Q35837239Identification of innate immunity elicitors using molecular signatures of natural selection
Q28597732Identification of lipoxygenase (LOX) genes from legumes and their responses in wild type and cultivated peanut upon Aspergillus flavus infection
Q54458667Identification of new meningococcal serogroup B surface antigens through a systematic analysis of neisserial genomes.
Q35639700Identification of novel GDNF isoforms and cis-antisense GDNFOS gene and their regulation in human middle temporal gyrus of Alzheimer disease
Q39535264Identification of positive selection in disease response genes within members of the Poaceae.
Q37589347Identification of positive selection in genes is greatly improved by using experimentally informed site-specific models
Q92876763Identification of positively selected genes in human pathogenic treponemes: Syphilis-, yaws-, and bejel-causing strains differ in sets of genes showing adaptive evolution
Q38234881Identification of selection signatures in livestock species
Q93019909Identification of sex determination genes and their evolution in Phlebotominae sand flies (Diptera, Nematocera)
Q21261997Identification of white campion (Silene latifolia) guaiacol O-methyltransferase involved in the biosynthesis of veratrole, a key volatile for pollinator attraction
Q47749598Identification, characterisation and molecular modelling of two AP endonucleases from base excision repair pathway in sugarcane provide insights on the early evolution of green plants
Q33655574Identification, classification and evolution of owl monkeys (Aotus, Illiger 1811)
Q39198291Identification, genealogical structure and population genetics of S-alleles in Malus sieversii, the wild ancestor of domesticated apple
Q58697126Identifying Drivers of Parallel Evolution: A Regression Model Approach
Q30382498Identifying changes in selective constraints: host shifts in influenza.
Q57804814Identifying signatures of natural selection in cork oak (Quercus suber L.) genes through SNP analysis
Q90640490Identifying the drivers of computationally detected correlated evolution among sites under antibiotic selection
Q28603271If Dung Beetles (Scarabaeidae: Scarabaeinae) Arose in Association with Dinosaurs, Did They Also Suffer a Mass Co-Extinction at the K-Pg Boundary?
Q37501197Imbalanced positive selection maintains the functional divergence of duplicated DIHYDROKAEMPFEROL 4-REDUCTASE genes
Q92969376Immediate Dosage Compensation Is Triggered by the Deletion of Y-Linked Genes in Silene latifolia
Q61450220Immune genes are hotspots of shared positive selection across birds and mammals
Q37366540Immune-related functions of the Hivep gene family in East African cichlid fishes
Q41135154Immunogenetic heterogeneity in a widespread ungulate: the European roe deer (Capreolus capreolus).
Q37162231Impact of HIV co-infection on the evolution and transmission of multidrug-resistant tuberculosis
Q61445482Impact of Homologous Recombination on the Evolution of Prokaryotic Core Genomes
Q42870573Impact of extracellularity on the evolutionary rate of mammalian proteins
Q35177705Impact of recurrent gene duplication on adaptation of plant genomes
Q34344306Impact of translational error-induced and error-free misfolding on the rate of protein evolution
Q33674185Implications of the plastid genome sequence of typha (typhaceae, poales) for understanding genome evolution in poaceae
Q31139446Importance of gene duplication in the evolution of genomic imprinting revealed by molecular evolutionary analysis of the type I MADS-box gene family in Arabidopsis species
Q35367107Improved gene tree error correction in the presence of horizontal gene transfer
Q61448605Improved inference of site-specific positive selection under a generalized parametric codon model when there are multinucleotide mutations and multiple nonsynonymous rates
Q33792247Improved mitochondrial amino acid substitution models for metazoan evolutionary studies
Q88892070Improving cytidine and adenine base editors by expression optimization and ancestral reconstruction
Q36663988Improving genome-wide scans of positive selection by using protein isoforms of similar length
Q64013657In Cold Blood: Compositional Bias and Positive Selection Drive the High Evolutionary Rate of Vampire Bats Mitochondrial Genomes
Q35952312In Silico Reconstruction of the Viral Evolutionary Lineage Yields a Potent Gene Therapy Vector
Q42551391In defense of statistical methods for detecting positive selection
Q33507768In planta expression screens of Phytophthora infestans RXLR effectors reveal diverse phenotypes, including activation of the Solanum bulbocastanum disease resistance protein Rpi-blb2.
Q28652613In search of pathogens: transcriptome-based identification of viral sequences from the pine processionary moth (Thaumetopoea pityocampa)
Q44157694In silico characterization and comparative genomic analysis of the Culex quinquefasciatus glutathione S-transferase (GST) supergene family
Q46032791In silico characterization and molecular evolutionary analysis of a novel superfamily of fungal effector proteins.
Q34413936In silico evolutionary analysis of Helicobacter pylori outer membrane phospholipase A (OMPLA)
Q42684892In silico peptide-binding predictions of passerine MHC class I reveal similarities across distantly related species, suggesting convergence on the level of protein function
Q34037615In silico resurrection of the major vault protein suggests it is ancestral in modern eukaryotes
Q47550608In-depth phylodynamics, evolutionary analysis and in silico predictions of universal epitopes of Influenza A subtypes and Influenza B viruses
Q40286972Inactivation of C4orf26 in toothless placental mammals.
Q36279347Inactivation of the olfactory marker protein (OMP) gene in river dolphins and other odontocete cetaceans
Q33898843Inactivation of thermogenic UCP1 as a historical contingency in multiple placental mammal clades
Q50696830Incipient speciation of sea star populations by adaptive gamete recognition coevolution.
Q111742458Incomplete lineage sorting and local extinction shaped the complex evolutionary history of the Paleogene relict conifer genus, Chamaecyparis (Cupressaceae)
Q60198483Incomplete lineage sorting impacts the inference of macroevolutionary regimes from molecular phylogenies when concatenation is employed: An analysis based on Cetacea
Q34558601Incomplete lineage sorting is common in extant gibbon genera
Q46263241Incongruence among different mitochondrial regions: a case study using complete mitogenomes.
Q28729107Incorrect handling of calibration information in divergence time inference: an example from volcanic islands
Q90637807Increase of Redox Potential during the Evolution of Enzymes Degrading Recalcitrant Lignin
Q47437809Increased Affinity for RNA Targets Evolved Early in Animal and Plant Dicer Lineages through Different Structural Mechanisms
Q40027560Increased constraints on MC4R during primate and human evolution
Q36271937Increased rates of protein evolution and asymmetric deceleration after the whole-genome duplication in yeasts
Q38578409Increased substitution rates surrounding low-complexity regions within primate proteins
Q36010472Independent Evolution of Winner Traits without Whole Genome Duplication in Dekkera Yeasts
Q46850623Independent birth of a novel TRIMCyp in Tupaia belangeri with a divergent function from its paralog TRIM5.
Q45025162Independent evolution of functional MHC class II DRB genes in New World bat species.
Q35108865Independent expansion of zincin metalloproteinases in Onygenales fungi may be associated with their pathogenicity
Q33483027Independent inactivation of arginine decarboxylase genes by nonsense and missense mutations led to pseudogene formation in Chlamydia trachomatis serovar L2 and D strains
Q28677032Independent losses of visual perception genes Gja10 and Rbp3 in echolocating bats (Order: Chiroptera)
Q46021913Independent pseudogenization of CYP2J19 in penguins, owls and kiwis implicates gene in red carotenoid synthesis.
Q34781903Independent stratum formation on the avian sex chromosomes reveals inter-chromosomal gene conversion and predominance of purifying selection on the W chromosome
Q83224745Indirect sexual selection drives rapid sperm protein evolution in abalone
Q50624570Inference of Episodic Changes in Natural Selection Acting on Protein Coding Sequences via CODEML.
Q44343490Inference of functional divergence among proteins when the evolutionary process is non-stationary
Q34244882Inference of genotype-phenotype relationships in the antigenic evolution of human influenza A (H3N2) viruses.
Q26765962Inferences from tip-calibrated phylogenies: a review and a practical guide
Q33707890Inferring Rates and Length-Distributions of Indels Using Approximate Bayesian Computation
Q28750576Inferring clocks when lacking rocks: the variable rates of molecular evolution in bacteria
Q35186340Inferring gene family histories in yeast identifies lineage specific expansions
Q30497073Inferring nonneutral evolution from contrasting patterns of polymorphisms and divergences in different protein coding regions of enterovirus 71 circulating in Taiwan during 1998-2003.
Q34263340Inferring phylogenies of evolving sequences without multiple sequence alignment.
Q89644732Inferring putative ancient whole-genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions
Q37233772Inferring selection in the Anopheles gambiae species complex: an example from immune-related serine protease inhibitors
Q55480211Inferring the Probability of the Derived vs. the Ancestral Allelic State at a Polymorphic Site.
Q33685838Inferring the evolutionary mechanism of the chloroplast genome size by comparing whole-chloroplast genome sequences in seed plants
Q55329547Influence of Effective Population Size on Genes under Varying Levels of Selection Pressure.
Q45351930Influence of overlapping genes on the evolution of human hepatitis B virus
Q60302263Influence of pathway topology and functional class on the molecular evolution of human metabolic genes
Q47197743Information Criteria for Comparing Partition Schemes
Q28647933Initial Evidence for Adaptive Selection on the NADH Subunit Two of Freshwater Dolphins by Analyses of Mitochondrial Genomes
Q36224210Initiation of recombination suppression and PAR formation during the early stages of neo-sex chromosome differentiation in the Okinawa spiny rat, Tokudaia muenninki
Q55344083Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola.
Q48141481Insight into higher-level phylogeny of Neuropterida: Evidence from secondary structures of mitochondrial rRNA genes and mitogenomic data
Q90523195Insights into Avian Incomplete Dosage Compensation: Sex-Biased Gene Expression Coevolves with Sex Chromosome Degeneration in the Common Whitethroat
Q64119792Insights into Body Size Evolution: A Comparative Transcriptome Study on Three Species of Asian Sisoridae Catfish
Q41718366Insights into Symbiont Population Structure among Three Vestimentiferan Tubeworm Host Species at Eastern Pacific Spreading Centers
Q92221257Insights into body size variation in cetaceans from the evolution of body-size-related genes
Q38836195Insights into evolution in Andean Polystichum (Dryopteridaceae) from expanded understanding of the cytosolic phosphoglucose isomerase gene
Q29587256Insights into intercontinental spread of Zika virus
Q33611700Insights into the Existence of Isomeric Plastomes in Cupressoideae (Cupressaceae)
Q64067948Insights into the Genomics of Clownfish Adaptive Radiation: Genetic Basis of the Mutualism with Sea Anemones
Q90597885Insights into the ecological roles and evolution of methyl-coenzyme M reductase-containing hot spring Archaea
Q28708852Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequence
Q28611130Insights into the evolution of longevity from the bowhead whale genome
Q36180617Insights into the innate immunome of actiniarians using a comparative genomic approach
Q93369480Insights into the origin and evolution of Peritrichia (Oligohymenophorea, Ciliophora) based on analyses of morphology and phylogenomics
Q55237934Insights into the phylogenetic and molecular evolutionary histories of Fad and Elovl gene families in Actiniaria.
Q92243222Insights into the phylogeny of Hemiptera from increased mitogenomic taxon sampling
Q34016651Insights into three whole-genome duplications gleaned from the Paramecium caudatum genome sequence.
Q28652792Insights on the evolution of mycoparasitism from the genome of Clonostachys rosea
Q111630344Insufficient resolving power of mitogenome data in deciphering deep phylogeny of Holometabola
Q57211836Integrated genomic and fossil evidence illuminates life's early evolution and eukaryote origin
Q89983086Integrated structural and evolutionary analysis reveals common mechanisms underlying adaptive evolution in mammals
Q37677947Integrative Approaches for Studying Mitochondrial and Nuclear Genome Co-evolution in Oxidative Phosphorylation
Q34645531Integrative analysis of young genes, positively selected genes and lncRNAs in the development of Drosophila melanogaster
Q41260630Inter- and intra-domain horizontal gene transfer, gain-loss asymmetry and positive selection mark the evolutionary history of the CBM14 family
Q35013523Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation.
Q35061435Interacting proteins on human spermatozoa: adaptive evolution of the binding of semenogelin I to EPPIN
Q111629397Interactions among proteins of floral MADS-box genes in Nuphar pumila (Nymphaeaceae) and the most recent common ancestor of extant angiosperms help understand the underlying mechanisms of the origin of the flower
Q33783939Interferon-induced genes of the expanded IFIT family show conserved antiviral activities in non-mammalian species
Q92422043Intergeneric Relationships within the Family Salicaceae s.l. based on Plastid Phylogenomics
Q33391509Intergenic locations of rice centromeric chromatin
Q38957822Intergenic sequence comparison of Escherichia coli isolates reveals lifestyle adaptations but not host specificity.
Q39642337Interleukin-37 gene variants segregated anciently coexist during hominid evolution
Q34479523Interordinal gene capture, the phylogenetic position of Steller's sea cow based on molecular and morphological data, and the macroevolutionary history of Sirenia
Q30501790Interplay of recombination and selection in the genomes of Chlamydia trachomatis
Q30993607Interpopulation patterns of divergence and selection across the transcriptome of the copepod Tigriopus californicus.
Q33757219Interspecific Plastome Recombination Reflects Ancient Reticulate Evolution in Picea (Pinaceae).
Q42624071Interspecific hybridization increases MHC class II diversity in two sister species of newts
Q34126347Interspecific sex in grass smuts and the genetic diversity of their pheromone-receptor system
Q46158700Intrahost Genetic Diversity of Bacterial Symbionts Exhibits Evidence of Mixed Infections and Recombinant Haplotypes
Q46968204Intraspecific lineages of the lizard Phrynocephalus putjatia from the Qinghai-Tibetan Plateau: impact of physical events on divergence and discordance between morphology and molecular markers
Q38919598Intraspecific specialization of the generalist parasitoid Cotesia sesamiae revealed by polyDNAvirus polymorphism and associated with different Wolbachia infection.
Q52781551Intraspecific sperm competition genes enforce post-mating species barriers in Drosophila.
Q52593231Introduction of viral haemorrhagic septicaemia virus (VHSV) to freshwater cultured rainbow trout is followed by bursts of adaptive evolution.
Q38850632Introgression and repeated co-option facilitated the recurrent emergence of C4 photosynthesis among close relatives
Q36756762Introgression maintains the genetic integrity of the mating-type determining chromosome of the fungus Neurospora tetrasperma
Q33582725Invasion of Ancestral Mammals into Dim-light Environments Inferred from Adaptive Evolution of the Phototransduction Genes
Q39713632Inversions and adaptation to the plant toxin ouabain shape DNA sequence variation within and between chromosomal inversions of Drosophila subobscura
Q47198820Inverted formin 2 regulates intracellular trafficking, placentation, and pregnancy outcome.
Q37298963Investigating protein-coding sequence evolution with probabilistic codon substitution models
Q35235397Investigating the path of plastid genome degradation in an early-transitional clade of heterotrophic orchids, and implications for heterotrophic angiosperms
Q91895058Investigation of chronic and persistent classical swine fever infections under field conditions and their impact on vaccine efficacy
Q53428665Investigation of the potential for triterpene synthesis in rice through genome mining and metabolic engineering.
Q28740561Investment in rapid growth shapes the evolutionary rates of essential proteins
Q46608239Involvement of AmphiREL, a Rel-like gene identified in Brachiastoma belcheri, in LPS-induced response: implication for evolution of Rel subfamily genes
Q37229435Iron-Sulfur Cluster Biogenesis Chaperones: Evidence for Emergence of Mutational Robustness of a Highly Specific Protein-Protein Interaction
Q46506879Is Mutation Random or Targeted?: No Evidence for Hypermutability in Snail Toxin Genes
Q34287541Is promiscuity associated with enhanced selection on MHC-DQα in mice (genus Peromyscus)?
Q33478399Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates
Q36469020Isolation and characterization of putative functional long terminal repeat retrotransposons in the Pyrus genome
Q51620668Isolation and characterization of the CYP2D6 gene in Felidae with comparison to other mammals.
Q52318652Isolation and characterization of the major histocompatibility complex DQA1 and DQA2 genes in gayal (Bos frontalis).
Q28601974Izumo1 and Juno: the evolutionary origins and coevolution of essential sperm-egg binding partners
Q30494920JCoDA: a tool for detecting evolutionary selection
Q33572322KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies
Q33904603Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional and separate models for combined molecular phylogenetic analyses of multilocus sequence data
Q52693566Keeping the blood flowing-plasminogen activator genes and feeding behavior in vampire bats.
Q35968822Key Role of Amino Acid Repeat Expansions in the Functional Diversification of Duplicated Transcription Factors
Q35500574Kinase domain-targeted isolation of defense-related receptor-like kinases (RLK/Pelle) in Platanus×acerifolia: phylogenetic and structural analysis
Q35509663Kinase dynamics. Using ancient protein kinases to unravel a modern cancer drug's mechanism
Q21146631Kiwi genome provides insights into evolution of a nocturnal lifestyle
Q34686560Kr/Kc but not dN/dS correlates positively with body mass in birds, raising implications for inferring lineage-specific selection
Q36613904Kranz and single-cell forms of C4 plants in the subfamily Suaedoideae show kinetic C4 convergence for PEPC and Rubisco with divergent amino acid substitutions
Q37322176L1 and L2 gene polymorphisms in HPV-58 and HPV-33: implications for vaccine design and diagnosis
Q36123592LMAP: Lightweight Multigene Analyses in PAML.
Q30405208LRR conservation mapping to predict functional sites within protein leucine-rich repeat domains
Q92598917LSX: automated reduction of gene-specific lineage evolutionary rate heterogeneity for multi-gene phylogeny inference
Q36904221LS³: A Method for Improving Phylogenomic Inferences When Evolutionary Rates Are Heterogeneous among Taxa
Q37461570LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans
Q46542391Lack of GLYCOLATE OXIDASE1, but Not GLYCOLATE OXIDASE2, Attenuates the Photorespiratory Phenotype of CATALASE2-Deficient Arabidopsis.
Q36136524Lack of Spatial Immunogenetic Structure among Wolverine (Gulo gulo) Populations Suggestive of Broad Scale Balancing Selection
Q49838595Lack of evidence for selection favouring MHC haplotypes that combine high functional diversity.
Q28255984Lagging-strand replication shapes the mutational landscape of the genome
Q36476101Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes.
Q58094589Landscape of gene transposition-duplication within the Brassicaceae family
Q48137213Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects.
Q46293892Large Variation in the Ratio of Mitochondrial to Nuclear Mutation Rate across Animals: Implications for Genetic Diversity and the Use of Mitochondrial DNA as a Molecular Marker
Q90125978Large X-linked palindromes undergo arm-to-arm gene conversion across Mus lineages
Q30494614Large genomic differences between the morphologically indistinguishable diplomonads Spironucleus barkhanus and Spironucleus salmonicida
Q84871355Large scale of human duplicate genes divergence
Q36236759Large-Scale Comparative Analysis Reveals the Mechanisms Driving Plastomic Compaction, Reduction, and Inversions in Conifers II (Cupressophytes)
Q34120942Large-scale analysis of orthologs and paralogs under covarion-like and constant-but-different models of amino acid evolution
Q36119964Large-scale introgression shapes the evolution of the mating-type chromosomes of the filamentous ascomycete Neurospora tetrasperma.
Q64013335Large-scale molecular phylogeny, morphology, divergence-time estimation, and the fossil record of advanced caenophidian snakes (Squamata: Serpentes)
Q43031591Large-scale phylogenomic analyses indicate a deep origin of primary plastids within cyanobacteria.
Q36936268Large-scale reconstruction and phylogenetic analysis of metabolic environments
Q33804870Lateral Gene Transfer Dynamics in the Ancient Bacterial Genus Streptomyces
Q37237755Laterally Transferred Gene Recruited as a Venom in Parasitoid Wasps
Q28749048Latitude, elevation and the tempo of molecular evolution in mammals
Q37324363Learning to count: robust estimates for labeled distances between molecular sequences
Q59813593Legume Cytosolic and Plastid Acetyl-Coenzyme-A Carboxylase Genes Differ by Evolutionary Patterns and Selection Pressure Schemes Acting before and after Whole-Genome Duplications
Q28740958LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes
Q28655035Leporid immunoglobulin G shows evidence of strong selective pressure on the hinge and CH3 domains
Q36351361Less effective selection leads to larger genomes
Q38899662Life History Traits, Protein Evolution, and the Nearly Neutral Theory in Amniotes
Q34536898Life History of the Oldest Lentivirus: Characterization of ELVgv Integrations in the Dermopteran Genome.
Q46261921Light sensing by opsins and fungal ecology: NOP-1 modulates entry into sexual reproduction in response to environmental cues
Q51111512Limitations of locally sampled characters in phylogenetic analyses of sparse supermatrices.
Q36560114Limited Antigenic Diversity in Contemporary H7 Avian-Origin Influenza A Viruses from North America
Q58732366Limited Evidence for Parallel Molecular Adaptations Associated with the Subterranean Niche in Mammals: A Comparative Study of Three Superorders
Q44552980Limited genomic consequences of mixed mating in the recently derived sister species pair, Collinsia concolor and Collinsia parryi
Q41637021Limited locomotive ability relaxed selective constraints on molluscs mitochondrial genomes
Q42810710Limited utility of residue masking for positive-selection inference
Q84014094Lineage pattern, trans-species polymorphism, and selection pressure among the major lineages of feline MHC-DRB peptide-binding region
Q58606926Lineage-Specific Expression Divergence in Grasses Is Associated with Male Reproduction, Host-Pathogen Defense, and Domestication.
Q36076829Lineage-Specific Reductions of Plastid Genomes in an Orchid Tribe with Partially and Fully Mycoheterotrophic Species.
Q33771844Lineage-specific differences in the amino acid substitution process
Q46828954Lineage-specific duplication and loss of pepsinogen genes in hominoid evolution
Q38696679Lineage-specific duplications of Muroidea Faim and Spag6 genes and atypical accelerated evolution of the parental Spag6 gene
Q49389778Lineage-specific duplications of NBS-LRR genes occurring before the divergence of six Fragaria species.
Q46255453Lineage-specific evolution of bitter taste receptor genes in the giant and red pandas implies dietary adaptation
Q36018095Lineage-specific gene radiations underlie the evolution of novel betalain pigmentation in Caryophyllales
Q33870485Lineage-specific late pleistocene expansion of an endemic subtropical gossamer-wing damselfly, Euphaea formosa, in Taiwan
Q28648514Lineage-specific loss of FGF17 within the avian orders Galliformes and Passeriformes
Q33532314Lineage-specific positive selection at the merozoite surface protein 1 (msp1) locus of Plasmodium vivax and related simian malaria parasites.
Q35781197Lineage-specific sequence evolution and exon edge conservation partially explain the relationship between evolutionary rate and expression level in A. thaliana
Q43891060Lineage-specific variation in slow- and fast-X evolution in primates.
Q28706290Linking genomics and ecology to investigate the complex evolution of an invasive Drosophila pest
Q30155924Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis
Q33671589Lipidome determinants of maximal lifespan in mammals
Q90596686Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation
Q90249989Little Evidence of Antagonistic Selection in the Evolutionary Strata of Fungal Mating-Type Chromosomes (Microbotryum lychnidis-dioicae)
Q35574855Local adaptation of Gymnocypris przewalskii (Cyprinidae) on the Tibetan Plateau
Q34341633Localized hypermutation and associated gene losses in legume chloroplast genomes
Q34080272Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes
Q28475448Long- and short-term selective forces on malaria parasite genomes
Q36245873Long-Lasting Gene Conversion Shapes the Convergent Evolution of the Critical Methanogenesis Genes
Q55112638Long-Range and Targeted Ectopic Recombination between the Two Homeologous Chromosomes 11 and 12 in Oryza Species
Q92480443Long-read sequencing reveals genomic structural variations that underlie creation of quality protein maize
Q33782568Long-read sequencing uncovers the adaptive topography of a carnivorous plant genome
Q36439815Long-term and short-term evolutionary impacts of transposable elements on Drosophila
Q42143357Long-term asymmetrical acceleration of protein evolution after gene duplication
Q46380815Long-wavelength sensitive opsin (LWS) gene variability in Neotropical cichlids (Teleostei: Cichlidae).
Q40864140Longevity Is Linked to Mitochondrial Mutation Rates in Rockfish: A Test Using Poisson Regression
Q34185902Loss and gain of function in SERPINB11: an example of a gene under selection on standing variation, with implications for host-pathogen interactions
Q37304959Loss of RIG-I leads to a functional replacement with MDA5 in the Chinese tree shrew
Q35886377Loss of YABBY2-Like Gene Expression May Underlie the Evolution of the Laminar Style in Canna and Contribute to Floral Morphological Diversity in the Zingiberales
Q36281374Loss of genes related to Nucleotide Excision Repair (NER) and implications for reductive genome evolution in symbionts of deep-sea vesicomyid clams.
Q40085784Low Major Histocompatibility Complex Class II Variation in the Endangered Indo-Pacific Humpback Dolphin (Sousa chinensis): Inferences About the Role of Balancing Selection.
Q45164003Low rates of bindin codon evolution in lecithotrophic Heliocidaris sea urchins
Q36517727Low sulfide levels and a high degree of cystathionine β-synthase (CBS) activation by S-adenosylmethionine (SAM) in the long-lived naked mole-rat
Q41946390Lower prevalence but similar fitness in a parasitic fungus at higher radiation levels near Chernobyl
Q92203113M1CR0B1AL1Z3R-a user-friendly web server for the analysis of large-scale microbial genomics data
Q33686054MHC class I and MHC class II DRB gene variability in wild and captive Bengal tigers (Panthera tigris tigris).
Q39535098MHC class I variation in a natural blue tit population (Cyanistes caeruleus).
Q37058669MHC class II B diversity in blue tits: a preliminary study
Q28708846MHC class II DQB diversity in the Japanese black bear, Ursus thibetanus japonicus
Q35227375MHC class II DRB diversity, selection pattern and population structure in a neotropical bat species, Noctilio albiventris.
Q46722512MHC class II genes in the European badger (Meles meles): characterization, patterns of variation, and transcription analysis
Q35171439MHC class II variation in a rare and ecological specialist mouse lemur reveals lower allelic richness and contrasting selection patterns compared to a generalist and widespread sympatric congener
Q36158216MHC class II β exon 2 variation in pardalotes (Pardalotidae) is shaped by selection, recombination and gene conversion
Q34919243MHC class IIB exon 2 polymorphism in the Grey partridge (Perdix perdix) is shaped by selection, recombination and gene conversion
Q44250568MHC diversity, malaria and lifetime reproductive success in collared flycatchers.
Q38343564MHC evolution in three salmonid species: a comparison between class II alpha and beta genes.
Q34773913MHC genes and parasitism in Carassius gibelio, a diploid-triploid fish species with dual reproduction strategies.
Q91624988MHC structuring and divergent allele advantage in a urodele amphibian: a hierarchical multi-scale approach
Q40863893MHC, parasites and antler development in red deer: no support for the Hamilton & Zuk hypothesis.
Q28648452MITOSCISSOR: A Useful Tool for Auto-Assembly of Mitogenomic Datasets in the Evolutionary Analysis of Fishes
Q31062772MOLECULAR PHYLOGENY AND TAXONOMY OF THE AEGAGROPILA CLADE (CLADOPHORALES, ULVOPHYCEAE), INCLUDING THE DESCRIPTION OF AEGAGROPILOPSIS GEN. NOV. AND PSEUDOCLADOPHORA GEN. NOV.(1).
Q30837902MORPH: probabilistic alignment combined with hidden Markov models of cis-regulatory modules
Q34456088MOV10 RNA helicase is a potent inhibitor of retrotransposition in cells
Q21090842Macroevolutionary dynamics and historical biogeography of primate diversification inferred from a species supermatrix
Q53692466Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes.
Q64106608Magic roundabout is an endothelial-specific ohnolog of ROBO1 which neo-functionalized to an essential new role in angiogenesis
Q35624909Major Histocompatibility Complex Genes Map to Two Chromosomes in an Evolutionarily Ancient Reptile, the Tuatara Sphenodon punctatus
Q84651688Major Revisions in Arthropod Phylogeny Through Improved Supermatrix, With Support for Two Possible Waves of Land Invasion by Chelicerates
Q91843775Major histocompatibility complex class I diversity limits the repertoire of T cell receptors
Q34777890Major histocompatibility complex class I evolution in songbirds: universal primers, rapid evolution and base compositional shifts in exon 3
Q40539454Major histocompatibility complex class II genetic variation in forest musk deer (Moschus berezovskii) in China
Q44955240Major histocompatibility complex class II polymorphisms in forest musk deer (Moschus berezovskii) and their probable association with purulent disease
Q21135002Major population expansion of East Asians began before neolithic time: evidence of mtDNA genomes
Q35882549Major taste loss in carnivorous mammals.
Q33346475Male-biased genes are overrepresented among novel Drosophila pseudoobscura sex-biased genes
Q37049456Male-specific region of the bovine Y chromosome is gene rich with a high transcriptomic activity in testis development
Q34531503Mammal madness: is the mammal tree of life not yet resolved?
Q34478373Mammalian NPC1 genes may undergo positive selection and human polymorphisms associate with type 2 diabetes
Q41335920Mammalian genome evolution is governed by multiple pacemakers
Q28655231Mammalian keratin associated proteins (KRTAPs) subgenomes: disentangling hair diversity and adaptation to terrestrial and aquatic environments
Q97539538Mandarin fish (Sinipercidae) genomes provide insights into innate predatory feeding
Q45072776Mapping Genomic Scaffolds to Chromosomes Using Laser Capture Microdissection in Application to Hawaiian Picture-Winged Drosophila.
Q44803668Mapping, phylogenetic and expression analysis of the RNase (RNase A) locus in cattle
Q44429790Marine turtle mitogenome phylogenetics and evolution
Q28478338Markov models of amino acid substitution to study proteins with intrinsically disordered regions
Q41882061Markovian and non-Markovian protein sequence evolution: aggregated Markov process models
Q34961949Masculinization of gene expression is associated with exaggeration of male sexual dimorphism
Q90438997Mass-spectrometry-based draft of the Arabidopsis proteome
Q42320265Massive and widespread organelle genomic expansion in the green algal genus Dunaliella
Q46973084Massive difference in synonymous substitution rates among mitochondrial, plastid, and nuclear genes of Phaeocystis algae
Q33747206Massive expansion and differential evolution of small heat shock proteins with wheat (Triticum aestivum L.) polyploidization
Q91727941Massive expansion and diversity of nicotinic acetylcholine receptors in lophotrochozoans
Q28652956Massive expansion and functional divergence of innate immune genes in a protostome
Q34402710Massive expansion of Ubiquitination-related gene families within the Chlamydiae
Q34665742Massive genomic decay in Serratia symbiotica, a recently evolved symbiont of aphids
Q33836687Massive losses of taste receptor genes in toothed and baleen whales
Q28749162Massive turnover of functional sequence in human and other mammalian genomes
Q42586233Maternal-fetal conflict: rapidly evolving proteins in the rodent placenta
Q51180034Mating systems and protein-protein interactions determine evolutionary rates of primate sperm proteins.
Q30786784Mating systems and selection efficacy: a test using chloroplastic sequence data in Angiosperms
Q47904004Maximum likelihood implementation of an isolation-with-migration model with three species for testing speciation with gene flow
Q46870289Maximum likelihood inference of small trees in the presence of long branches.
Q40222339Maximum-Likelihood Phylogenetic Inference with Selection on Protein Folding Stability
Q40222721Maximum-Likelihood Tree Estimation Using Codon Substitution Models with Multiple Partitions
Q46253943Maximum-likelihood approaches reveal signatures of positive selection in BMP15 and GDF9 genes modulating ovarian function in mammalian female fertility.
Q44277897Maximum-likelihood approaches reveal signatures of positive selection in IL genes in mammals
Q37366208Measuring Accelerated Rates of Insertions and Deletions Independent of Rates of Nucleotide Substitution.
Q39023257Measuring Natural Selection
Q35008468Measuring the evolutionary rate of protein-protein interaction
Q33634609Mechanisms of haplotype divergence at the RGA08 nucleotide-binding leucine-rich repeat gene locus in wild banana (Musa balbisiana)
Q34917091Mechanisms of protein sequence divergence and incompatibility
Q111629377Mechanisms underlying flower color variation in Asian species of Meconopsis : A preliminary phylogenetic analysis based on chloroplast DNA and anthocyanin biosynthesis genes
Q42281809Mechanistic insights into molecular evolution of species-specific differential glycosaminoglycan binding surfaces in growth-related oncogene chemokines.
Q61797355Mechanistic insights into the evolution of DUF26-containing proteins in land plants
Q46341464Mechanochemical evolution of the giant muscle protein titin as inferred from resurrected proteins.
Q67212840Megaphylogeny resolves global patterns of mushroom evolution
Q38601982Meiotic Genes in Colpodean Ciliates Support Secretive Sexuality
Q28754594Meiotic recombination generates rich diversity in NK cell receptor genes, alleles, and haplotypes.
Q92541410Mesostigma viride Genome and Transcriptome Provide Insights into the Origin and Evolution of Streptophyta
Q57797074Metabolic determinants of enzyme evolution in a genome-scale bacterial metabolic network
Q43810520Metabolic flux is a determinant of the evolutionary rates of enzyme-encoding genes
Q64982262Metabolites of lactic acid bacteria present in fermented foods are highly potent agonists of human hydroxycarboxylic acid receptor 3.
Q42623632Metagenomic analysis of a complex marine planktonic thaumarchaeal community from the Gulf of Maine
Q39196136Metagenomic evidence for metabolism of trace atmospheric gases by high-elevation desert Actinobacteria
Q33687766Metazoan Ribosome Inactivating Protein encoding genes acquired by Horizontal Gene Transfer
Q47931137Microbial sequence typing in the genomic era.
Q28658258Microcephaly genes evolved adaptively throughout the evolution of eutherian mammals
Q37393673Microevolutionary traits and comparative population genomics of the emerging pathogenic fungus Cryptococcus gattii
Q58720906Microhabitat change drives diversification in pholcid spiders
Q36922137Microsatellite and major histocompatibility complex variation in an endangered rattlesnake, the Eastern Massasauga (Sistrurus catenatus).
Q43174351Microsatellites in Brassica unigenes: relative abundance, marker design, and use in comparative physical mapping and genome analysis
Q34237024Miiuy croaker hepcidin gene and comparative analyses reveal evidence for positive selection
Q34407984Miiuy croaker transferrin gene and evidence for positive selection events reveal different evolutionary patterns
Q92740119Mikania micrantha genome provides insights into the molecular mechanism of rapid growth
Q36305456Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions, and accelerated rate of evolution in clpP.
Q35845837Miniaturized mitogenome of the parasitic plant Viscum scurruloideum is extremely divergent and dynamic and has lost all nad genes
Q37215228Minimal effect of ectopic gene conversion among recent duplicates in four mammalian genomes.
Q22122070Minke whale genome and aquatic adaptation in cetaceans
Q39141203Mitochondrial DNA diversity of present-day Aboriginal Australians and implications for human evolution in Oceania
Q34034694Mitochondrial DNA of Clathrina clathrus (Calcarea, Calcinea): six linear chromosomes, fragmented rRNAs, tRNA editing, and a novel genetic code.
Q36071196Mitochondrial Genome Variation after Hybridization and Differences in the First and Second Generation Hybrids of Bream Fishes
Q64267635Mitochondrial Genomics Reveals Shared Phylogeographic Patterns and Demographic History among Three Periodical Cicada Species Groups
Q57455494Mitochondrial OXPHOS genes provides insights into genetics basis of hypoxia adaptation in anchialine cave shrimps
Q46361267Mitochondrial Retroprocessing Promoted Functional Transfers of rpl5 to the Nucleus in Grasses
Q58542877Mitochondrial and plastid genomes from coralline red algae provide insights into the incongruent evolutionary histories of organelles
Q40419291Mitochondrial genome diversity among six laboratory zebrafish (Danio rerio) strains
Q64286879Mitochondrial genome diversity and evolution in Branchiopoda (Crustacea)
Q36196085Mitochondrial genome evolution in a single protoploid yeast species.
Q33712502Mitochondrial genome evolution in fire ants (Hymenoptera: Formicidae).
Q41433040Mitochondrial genome evolution in the Saccharomyces sensu stricto complex
Q94953396Mitochondrial genomes of three Bostrichiformia species and phylogenetic analysis of Polyphaga (Insecta, Coleoptera)
Q39197796Mitochondrial genomes reveal the global phylogeography and dispersal routes of the migratory locust.
Q21090798Mitochondrial phylogenomics of modern and ancient equids
Q50058640Mitochondrial phylogeny, divergence history and high-altitude adaptation of grassland caterpillars (Lepidoptera: Lymantriinae: Gynaephora) inhabiting the Tibetan Plateau.
Q91788042Mitochondrial plastid DNA can cause DNA barcoding paradox in plants
Q46450122Mitochondrial-nuclear co-evolution leads to hybrid incompatibility through pentatricopeptide repeat proteins.
Q48918553Mitochondrial-nuclear interactions and accelerated compensatory evolution: evidence from the primate cytochrome C oxidase complex.
Q37270728Mitochondrial-nuclear interactions: compensatory evolution or variable functional constraint among vertebrate oxidative phosphorylation genes?
Q41564634Mitogenome Sequencing in the Genus Camelus Reveals Evidence for Purifying Selection and Long-term Divergence between Wild and Domestic Bactrian Camels
Q89520371Mitogenome evolution in ladybirds: Potential association with dietary adaptation
Q61610706Mitogenome phylogeographic analysis of a planktonic crustacean
Q28607451Mitogenomic Meta-Analysis Identifies Two Phases of Migration in the History of Eastern Eurasian Sheep
Q89586862Mitogenomic Perspectives on the Adaptation to Extreme Alkaline Environment of Amur ide (Leuciscus waleckii)
Q99608486Mitogenomic architecture of the multivalent endemic black clam (Villorita cyprinoides) and its phylogenetic implications
Q28596236Mitogenomic perspectives on the origin of Tibetan loaches and their adaptation to high altitude
Q28818759Mixed Infections of Four Viruses, the Incidence and Phylogenetic Relationships of Sweet Potato Chlorotic Fleck Virus (Betaflexiviridae) Isolates in Wild Species and Sweetpotatoes in Uganda and Evidence of Distinct Isolates in East Africa
Q46263884Mode and rate of evolution of haemosporidian mitochondrial genomes: timing the radiation of avian parasites
Q62659220Model selection may not be a mandatory step for phylogeny reconstruction
Q43476183ModelOMatic: fast and automated model selection between RY, nucleotide, amino acid, and codon substitution models
Q92202935Modeling Structural Constraints on Protein Evolution via Side-Chain Conformational States
Q118162735Modelling of structures of ATR1-homologs from sister species of Hyaloperonospora arabidopsidis suggests different patterns for target-mediated and R-protein-mediated selection
Q37089708Models of coding sequence evolution
Q33553759Modular Organization of Residue-Level Contacts Shapes the Selection Pressure on Individual Amino Acid Sites of Ribosomal Proteins
Q56891637Molecular Analysis of Influenza A(H3N2) and A(H1N1)pdm09 Viruses circulating in the Democratic Republic of Congo, 2014
Q91814913Molecular Chaperones Accelerate the Evolution of Their Protein Clients in Yeast
Q40642224Molecular Characterization of the Complete Genome of Three Basal-BR Isolates of Turnip mosaic virus Infecting Raphanus sativus in China
Q46414914Molecular Convergent Evolution of the MYBPC2 Gene Among Three High-Elevation Amphibian Species
Q40806810Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana
Q116336524Molecular Evidence for the Nonmonophyly of the Asian Natricid Genus Xenochrophis (Serpentes, Colubroidea) as Inferred from Mitochondrial and Nuclear Genes
Q28551137Molecular Evolution and Characterization of Hemagglutinin (H) in Peste des Petits Ruminants Virus
Q55262362Molecular Evolution and Expression Divergence of HMT Gene Family in Plants.
Q37492087Molecular Evolution and Expression Divergence of the Aconitase (ACO) Gene Family in Land Plants
Q48199860Molecular Evolution and Functional Characterization of a Bifunctional Decarboxylase Involved in Lycopodium Alkaloid Biosynthesis
Q27318380Molecular Evolution and Functional Divergence of Trace Amine-Associated Receptors
Q55494077Molecular Evolution and Functional Divergence of the IgLON Family.
Q90027266Molecular Evolution in Small Steps under Prevailing Negative Selection: A Nearly Universal Rule of Codon Substitution
Q37197116Molecular Evolution of Drosophila Germline Stem Cell and Neural Stem Cell Regulating Genes
Q58764667Molecular Evolution of GDP-D-Mannose Epimerase (), a Key Gene in Plant Ascorbic Acid Biosynthesis
Q38981548Molecular Evolution of Human Coronavirus Genomes.
Q64115037Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey
Q92872735Molecular Evolution of the Glutathione S-Transferase Family in the Bemisia tabaci Species Complex
Q39250759Molecular Evolution of the Glycosyltransferase 6 Gene Family in Primates
Q40422255Molecular Evolution of the Neural Crest Regulatory Network in Ray-Finned Fish.
Q28552121Molecular Evolution of the Nuclear Factor (Erythroid-Derived 2)-Like 2 Gene Nrf2 in Old World Fruit Bats (Chiroptera: Pteropodidae)
Q43116443Molecular Evolution of the TET Gene Family in Mammals
Q92556899Molecular Evolutionary Analysis of Potato Virus Y Infecting Potato Based on the VPg Gene
Q41536362Molecular Evolutionary Analysis of β-Defensin Peptides in Vertebrates.
Q36064489Molecular Evolutionary Consequences of Island Colonization
Q36878957Molecular Evolutionary Dynamics of Respiratory Syncytial Virus Group A in Recurrent Epidemics in Coastal Kenya
Q55111029Molecular Footprints of Aquatic Adaptation Including Bone Mass Changes in Cetaceans.
Q36117462Molecular Mechanisms and Evolutionary Processes Contributing to Accelerated Divergence of Gene Expression on the Drosophila X Chromosome
Q52864185Molecular Population Genetics.
Q33316586Molecular adaptation and expression evolution following duplication of genes for organellar ribosomal protein S13 in rosids
Q39296816Molecular adaptation and resilience of the insect's nuclear receptor USP
Q28682285Molecular adaptation during a rapid adaptive radiation
Q33977695Molecular adaptation in flowering and symbiotic recognition pathways: insights from patterns of polymorphism in the legume Medicago truncatula
Q44817917Molecular adaptation in the world's deepest-living animal: Insights from transcriptome sequencing of the hadal amphipod Hirondellea gigas.
Q33413102Molecular adaptation of rbcL in the heterophyllous aquatic plant Potamogeton
Q93159675Molecular adaptation to salinity fluctuation in tropical intertidal environments of a mangrove tree Sonneratia alba
Q56337370Molecular adaptations for sensing and securing prey and insight into amniote genome diversity from the garter snake genome
Q55967711Molecular analyses of ostracod flocks from Lake Baikal and Lake Tanganyika
Q51820421Molecular analysis of ancient caries.
Q33710239Molecular analysis of phosphomannomutase (PMM) genes reveals a unique PMM duplication event in diverse Triticeae species and the main PMM isozymes in bread wheat tissues
Q34271726Molecular and ecological signs of mitochondrial adaptation: consequences for introgression?
Q83068078Molecular and evolutionary analyses of formyl peptide receptors suggest the absence of VNO-specific FPRs in primates
Q43903622Molecular and phylogenetic analysis of bovine coronavirus based on the spike glycoprotein gene
Q38777413Molecular basis for specific recognition of bacterial ligands by NAIP/NLRC4 inflammasomes
Q55358905Molecular chaperoning helps safeguarding mitochondrial integrity and motor functions in the Sahara silver ant Cataglyphis bombycina.
Q30398651Molecular characterization of MHC class IIB genes of sympatric Neotropical cichlids.
Q46673481Molecular characterization of insulin from squamate reptiles reveals sequence diversity and possible adaptive evolution
Q45757994Molecular characterization of two endothelin pathways in East African cichlid fishes
Q47967995Molecular cloning and characterization of the circumsporozoite protein gene of Plasmodium inui isolated from Formosan macaques (Macaca cyclopis) in Taiwan
Q50432899Molecular cloning and evolutionary analysis of GJB6 in mammals.
Q35604310Molecular cloning and expression analysis of WRKY transcription factor genes in Salvia miltiorrhiza
Q35499915Molecular cloning, characterization and positively selected sites of the glutathione S-transferase family from Locusta migratoria
Q41547595Molecular cloning, expression, and evolution analysis of type II CHI gene from peanut (Arachis hypogaea L.).
Q30354935Molecular co-evolution of a protease and its substrate elucidated by analysis of the activity of predicted ancestral hatching enzyme.
Q93134730Molecular convergence and positive selection associated with the evolution of symbiont transmission mode in stony corals
Q42746818Molecular convergence of infrared vision in snakes.
Q34604991Molecular dating of phylogenies by likelihood methods: a comparison of models and a new information criterion
Q34388641Molecular dating, evolutionary rates, and the age of the grasses.
Q28709278Molecular decay of enamel matrix protein genes in turtles and other edentulous amniotes
Q28751910Molecular decay of the tooth gene Enamelin (ENAM) mirrors the loss of enamel in the fossil record of placental mammals
Q40212390Molecular detection and genetic analysis of Akabane virus genogroup Ib in small ruminants in Turkey
Q33717724Molecular epidemiology of influenza A(H1N1)PDM09 hemagglutinin gene circulating in São Paulo State , Brazil: 2016 anticipated influenza season
Q35177647Molecular evolution accompanying functional divergence of duplicated genes along the plant starch biosynthesis pathway
Q28537676Molecular evolution and diversity of Conus peptide toxins, as revealed by gene structure and intron sequence analyses
Q53123136Molecular evolution and expression divergence of the Populus polygalacturonase supergene family shed light on the evolution of increasingly complex organs in plants.
Q59794312Molecular evolution and expression divergence of three key Met biosynthetic genes in plants: , and
Q51756924Molecular evolution and functional divergence of HAK potassium transporter gene family in rice (Oryza sativa L.).
Q52580922Molecular evolution and functional divergence of alcohol dehydrogenases in animals, fungi and plants.
Q54121396Molecular evolution and functional divergence of eukaryotic translation initiation factor 2-alpha kinases.
Q37016531Molecular evolution and functional divergence of soluble starch synthase genes in cassava (manihot esculenta crantz).
Q28744313Molecular evolution and functional divergence of the cytochrome P450 3 (CYP3) Family in Actinopterygii (ray-finned fish)
Q46929144Molecular evolution and functional divergence of the metallothionein gene family in vertebrates
Q37738374Molecular evolution and functional divergence of tubulin superfamily in the fungal tree of life
Q33420693Molecular evolution and functional diversification of fatty acid desaturases after recurrent gene duplication in Drosophila
Q38894921Molecular evolution and gene expression differences within the HD-Zip transcription factor family of Zea mays L.
Q44976469Molecular evolution and network-level analysis of the N-glycosylation metabolic pathway across primates
Q27496560Molecular evolution and phylogenetics of rodent malaria parasites
Q44295968Molecular evolution and positive Darwinian selection of the chloroplast maturase matK.
Q33693288Molecular evolution and the role of oxidative stress in the expansion and functional diversification of cytosolic glutathione transferases
Q46967719Molecular evolution constraints in the floral organ specification gene regulatory network module across 18 angiosperm genomes
Q54942764Molecular evolution of DNMT1 in vertebrates: Duplications in marsupials followed by positive selection.
Q35797750Molecular evolution of Drosophila Sex-lethal and related sex determining genes
Q24642331Molecular evolution of GYPC: evidence for recent structural innovation and positive selection in humans
Q36182068Molecular evolution of HoxA13 and the multiple origins of limbless morphologies in amphibians and reptiles
Q28822381Molecular evolution of Odorant-binding proteins gene family in two closely related Anastrepha fruit flies
Q33398163Molecular evolution of UCP1 and the evolutionary history of mammalian non-shivering thermogenesis
Q35547134Molecular evolution of a central region containing B cell epitopes in the gene encoding the p67 sporozoite antigen within a field population of Theileria parva
Q83144984Molecular evolution of a family of resistance gene analogs of nucleotide-binding site sequences in Solanum lycopersicum
Q29048188Molecular evolution of a gene cluster of serine proteases expressed in the Anopheles gambiae female reproductive tract
Q34259253Molecular evolution of a malaria resistance gene (DARC) in primates
Q47239493Molecular evolution of aminoacyl tRNA synthetase proteins in the early history of life
Q36012810Molecular evolution of anthocyanin pigmentation genes following losses of flower color
Q35884362Molecular evolution of candidate male reproductive genes in the brown algal model Ectocarpus.
Q33974169Molecular evolution of cyclin proteins in animals and fungi
Q28750176Molecular evolution of genes in avian genomes
Q36278938Molecular evolution of globin genes in Gymnotiform electric fishes: relation to hypoxia tolerance
Q35246946Molecular evolution of glycinin and β-conglycinin gene families in soybean (Glycine max L. Merr.).
Q38503046Molecular evolution of immunoglobulin superfamily genes in primates
Q60302677Molecular evolution of juvenile hormone esterase-like proteins in a socially exchanged fluid
Q33574536Molecular evolution of lepidopteran silk proteins: insights from the ghost moth, Hepialus californicus
Q27329732Molecular evolution of multiple-level control of heme biosynthesis pathway in animal kingdom
Q46243208Molecular evolution of myoglobin in the Tibetan Plateau endemic schizothoracine fish (Cyprinidae, Teleostei) and tissue-specific expression changes under hypoxia
Q84435709Molecular evolution of novel swine-origin A/H1N1 influenza viruses among and before human
Q42647757Molecular evolution of paclitaxel biosynthetic genes TS and DBAT of Taxus species
Q43117046Molecular evolution of phytochromes in Cardamine nipponica (Brassicaceae) suggests the involvement of PHYE in local adaptation.
Q91259795Molecular evolution of prolactin in Chiroptera: Accelerated evolution and a large insertion in vespertilionid bats
Q28712376Molecular evolution of psbA gene in ferns: unraveling selective pressure and co-evolutionary pattern
Q28742971Molecular evolution of rbcL in three gymnosperm families: identifying adaptive and coevolutionary patterns
Q44866577Molecular evolution of teleost neural isozymes
Q97568146Molecular evolution of the ATP-binding cassette subfamily G member 2 gene subfamily and its paralogs in birds
Q42594425Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice
Q35569844Molecular evolution of the CYP2D subfamily in primates: purifying selection on substrate recognition sites without the frequent or long-tract gene conversion
Q34171047Molecular evolution of the deuterolysin (M35) family genes in Coccidioides
Q33571030Molecular evolution of the duplicated TFIIAgamma genes in Oryzeae and its relatives
Q36075607Molecular evolution of the ent-kaurenoic acid oxidase gene in Oryzeae
Q28645915Molecular evolution of the hyaluronan synthase 2 gene in mammals: implications for adaptations to the subterranean niche and cancer resistance
Q33521360Molecular evolution of the hyperthermophilic archaea of the Pyrococcus genus: analysis of adaptation to different environmental conditions
Q34098293Molecular evolution of the infrared sensory gene TRPA1 in snakes and implications for functional studies
Q90451067Molecular evolution of the meiotic recombination pathway in mammals
Q44193945Molecular evolution of the metazoan PHD-HIF oxygen-sensing system
Q38045125Molecular evolution of the neurohypophysial hormone precursors in mammals: Comparative genomics reveals novel mammalian oxytocin and vasopressin analogues
Q42002489Molecular evolution of the odorant and gustatory receptor genes in lepidopteran insects: implications for their adaptation and speciation
Q86367456Molecular evolution of the oxytocin-oxytocin receptor system in eutherians
Q38834704Molecular evolution of the plastid genome during diversification of the cotton genus
Q33650914Molecular evolution of the primate antiviral restriction factor tetherin
Q31161057Molecular evolution of the primate α-/θ-defensin multigene family
Q51609867Molecular evolution of the toll-like receptor multigene family in birds.
Q34087903Molecular evolution of the transmembrane domains of G protein-coupled receptors
Q37644844Molecular evolution of the vertebrate FK506 binding protein 25.
Q28743153Molecular evolution of the vertebrate TLR1 gene family--a complex history of gene duplication, gene conversion, positive selection and co-evolution
Q34384404Molecular evolution of trehalose-6-phosphate synthase (TPS) gene family in Populus, Arabidopsis and rice
Q40108854Molecular evolution of two asymptomatic echovirus 6 strains that constitute a novel branch of recently epidemic echovirus 6 in China
Q28535488Molecular evolution of vertebrate neurotrophins: co-option of the highly conserved nerve growth factor gene into the advanced snake venom arsenalf
Q24616943Molecular evolution of α-latrotoxin, the exceptionally potent vertebrate neurotoxin in black widow spider venom
Q34019486Molecular evolution under increasing transposable element burden in Drosophila: a speed limit on the evolutionary arms race
Q24648953Molecular evolution, functional variation, and proposed nomenclature of the gene family that includes sphingomyelinase D in sicariid spider venoms
Q111742438Molecular evolutionary analyses of tooth genes support sequential loss of enamel and teeth in baleen whales (Mysticeti)
Q28476833Molecular evolutionary analysis of ABCB5: the ancestral gene is a full transporter with potentially deleterious single nucleotide polymorphisms
Q52705476Molecular evolutionary analysis of seminal receptacle sperm storage organ genes of Drosophila melanogaster.
Q44279545Molecular evolutionary analysis of vertebrate transducins: a role for amino acid variation in photoreceptor deactivation
Q37557693Molecular evolutionary characterization of a V1R subfamily unique to strepsirrhine primates
Q33466753Molecular evolutionary consequences of niche restriction in Francisella tularensis, a facultative intracellular pathogen
Q33555447Molecular evolutionary mechanisms driving functional diversification of α-glucosidase in Lepidoptera
Q38646652Molecular evolutionary patterns of NAD+/Sirtuin aging signaling pathway across taxa
Q57175243Molecular footprints of inshore aquatic adaptation in Indo-Pacific humpback dolphin (Sousa chinensis)
Q58733288Molecular genetic and biochemical evidence for adaptive evolution of leaf abaxial epicuticular wax crystals in the genus Lithocarpus (Fagaceae)
Q34318227Molecular inferences suggest multiple host shifts of rabies viruses from bats to mesocarnivores in Arizona during 2001-2009.
Q64922892Molecular mechanism of the tree shrew's insensitivity to spiciness.
Q38872866Molecular mechanisms of postmating prezygotic reproductive isolation uncovered by transcriptome analysis
Q59508768Molecular palaeontology illuminates the evolution of ecdysozoan vision.
Q58695874Molecular parallelism in fast-twitch muscle proteins in echolocating mammals
Q51682848Molecular phylogenetic analyses of genus Crocodylus (Eusuchia, Crocodylia, Crocodylidae) and the taxonomic position of Crocodylus porosus.
Q28658795Molecular phylogenetics and temporal diversification in the genus Aeromonas based on the sequences of five housekeeping genes
Q38912130Molecular phylogenetics reveals a pattern of biome conservatism in New World anchovies (family Engraulidae).
Q37997899Molecular phylogenetics: principles and practice
Q56059111Molecular phylogeny and evolution of the Perissodactyla
Q34605915Molecular phylogeny and evolution of the proteins encoded by coleoid (cuttlefish, octopus, and squid) posterior venom glands
Q34520683Molecular phylogeny and historical biogeography of the Anatolian lizard Apathya (Squamata, Lacertidae).
Q42697766Molecular phylogeny of the Cladophoraceae (Cladophorales, Ulvophyceae), with the resurrection of Acrocladus Nägeli and Willeella Børgesen, and the description of Lurbica gen. nov. and Pseudorhizoclonium gen. nov.
Q42510935Molecular phylogeny of the Entomophthoromycota
Q21284048Molecular phylogeny of the higher and lower taxonomy of the Fusarium genus and differences in the evolutionary histories of multiple genes
Q28597843Molecular phylogeny of two unusual brown algae, Phaeostrophion irregulare and Platysiphon glacialis, proposal of the Stschapoviales ord. nov. and Platysiphonaceae fam. nov., and a re-examination of divergence times for brown algal orders
Q35177232Molecular phylogeny, biogeography, and habitat preference evolution of marsupials
Q44144603Molecular population genetics of the NADPH cytochrome P450 reductase (CPR) gene in Anopheles minimus
Q38598370Molecular population genetics of the OBP83 genomic region in Drosophila subobscura and D. guanche: contrasting the effects of natural selection and gene arrangement expansion in the patterns of nucleotide variation
Q42180912Molecular principles of human virus protein-protein interactions
Q43409430Molecular selection and functional divergence of HIF-α proteins in vertebrates
Q106698571Molecular systematics of the Sicista tianschanica species complex: a contribution from historical DNA analysis
Q33538756Molecular systematics: A synthesis of the common methods and the state of knowledge
Q34435145Molecular variation in AVP and AVPR1a in New World monkeys (Primates, Platyrrhini): evolution and implications for social monogamy
Q38257608Molecular-clock methods for estimating evolutionary rates and timescales
Q51363346Monophyly, divergence times, and evolution of host plant use inferred from a revised phylogeny of the Drosophila repleta species group.
Q28748406More reliable estimates of divergence times in Pan using complete mtDNA sequences and accounting for population structure
Q28675854Morphological and genetic evidence for multiple evolutionary distinct lineages in the endangered and commercially exploited red lined torpedo barbs endemic to the Western Ghats of India
Q64111027Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptation
Q56461005Morphology, molecules and taxonomy: extreme incongruence in pleurocerids (Gastropoda, Cerithioidea, Pleuroceridae)
Q44703368Mosaic evolution of silk genes in Aliatypus trapdoor spiders (mygalomorphae, antrodiaetidae).
Q28650801Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics
Q34456356Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes
Q36330078MtDNA analysis of global populations support that major population expansions began before Neolithic Time
Q37157317MtDNA analysis reveals enriched pathogenic mutations in Tibetan highlanders
Q83932945MtZoa: a general mitochondrial amino acid substitutions model for animal evolutionary studies
Q58869130Multi-locus species tree of the chub genus Squalius (Leuciscinae: Cyprinidae) from western Iberia: new insights into its evolutionary history
Q21092720Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
Q51408274Multi-step formation, evolution, and functionalization of new cytoplasmic male sterility genes in the plant mitochondrial genomes.
Q33945362MultiMSOAR 2.0: an accurate tool to identify ortholog groups among multiple genomes
Q60949572Multifactorial processes underlie parallel opsin loss in neotropical bats
Q33942374Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae).
Q51232514Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus.
Q46366383Multilocus phylogeny and statistical biogeography clarify the evolutionary history of major lineages of turtles
Q42235921Multilocus sequence typing using mitochondrial genes (mtMLST) reveals geographic population structure of Ixodes ricinus ticks
Q46657029Multiple Avirulence Loci and Allele-Specific Effector Recognition Control the Pm3 Race-Specific Resistance of Wheat to Powdery Mildew.
Q37113494Multiple Evolutionary Events Involved in Maintaining Homologs of Resistance to Powdery Mildew 8 in Brassica napus
Q37229415Multiple Genetic Mechanisms Contribute to Visual Sensitivity Variation in the Labridae
Q28597678Multiple Polyploidization Events across Asteraceae with Two Nested Events in the Early History Revealed by Nuclear Phylogenomics
Q42010690Multiple ancient horizontal gene transfers and duplications in lepidopteran species
Q43954994Multiple colonisations of the western Indian Ocean by Pteropus fruit bats (Megachiroptera: Pteropodidae): the furthest islands were colonised first
Q55035160Multiple convergent supergene evolution events in mating-type chromosomes.
Q28730642Multiple episodes of convergence in genes of the dim light vision pathway in bats
Q46737012Multiple evolution of flavonoid 3',5'-hydroxylase
Q34383348Multiple functionally divergent and conserved copies of alpha tubulin in bdelloid rotifers
Q33776251Multiple gene movements into and out of haploid sex chromosomes
Q33671764Multiple genetic divergences and population expansions of a Mediterranean sandfly, Phlebotomus ariasi, in Europe during the Pleistocene glacial cycles
Q35005249Multiple genomic recombination events in the evolution of saffold cardiovirus
Q92919026Multiple historical processes obscure phylogenetic relationships in a taxonomically difficult group (Lobariaceae, Ascomycota)
Q110697236Multiple independent losses of cell mouth in phylogenetically distant endosymbiotic lineages of oligohymenophorean ciliates: A lesson from Clausilocola
Q34653012Multiple interkingdom horizontal gene transfers in Pyrenophora and closely related species and their contributions to phytopathogenic lifestyles.
Q21089977Multiple invasions into freshwater by pufferfishes (teleostei: tetraodontidae): a mitogenomic perspective
Q49537798Multiple losses of photosynthesis and convergent reductive genome evolution in the colourless green algae Prototheca.
Q55334623Multiple massive domestication and recent amplification of Kolobok superfamily transposons in the clawed frog Xenopus.
Q34233893Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing.
Q33996712Multiple nuclear gene phylogenetic analysis of the evolution of dioecy and sex chromosomes in the genus Silene
Q28714729Multiple photosynthetic transitions, polyploidy, and lateral gene transfer in the grass subtribe Neurachninae
Q34740812Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes
Q38825439Multiple strong postmating and intrinsic postzygotic reproductive barriers isolate florally diverse species of Jaltomata (Solanaceae).
Q28650359Multispecies coalescent analysis of the early diversification of neotropical primates: phylogenetic inference under strong gene trees/species tree conflict
Q37350455Murine NKG2D ligands: "double, double toil and trouble".
Q75720075Musa balbisiana genome reveals subgenome evolution and functional divergence
Q33971954Museum genomics: low-cost and high-accuracy genetic data from historical specimens
Q33741325Mutation rate is linked to diversification in birds
Q35676474Mutation rates in plastid genomes: they are lower than you might think
Q46269573Mutational Biases and GC-Biased Gene Conversion Affect GC Content in the Plastomes of Dendrobium Genus
Q36353652Mutational bias and translational selection shaping the codon usage pattern of tissue-specific genes in rice
Q86016517Mutational bias is the driving force for shaping the synonymous codon usage pattern of alternatively spliced genes in rice (Oryza sativa L.).
Q33719871Mutational dynamics of murine angiogenin duplicates.
Q37421243Mutational effects on stability are largely conserved during protein evolution
Q28728524Mutational properties of amino acid residues: implications for evolvability of phosphorylatable residues
Q55329131Mutations in blind cavefish target the light-regulated circadian clock gene, period 2.
Q33960544Mutations in centrosomal protein CEP152 in primary microcephaly families linked to MCPH4.
Q42207007Mutations in the neverland gene turned Drosophila pachea into an obligate specialist species
Q30582508Mycobacterial phylogenomics: an enhanced method for gene turnover analysis reveals uneven levels of gene gain and loss among species and gene families
Q92189406Mycoheterotrophic Epirixanthes (Polygalaceae) has a typical angiosperm mitogenome but unorthodox plastid genomes
Q40074554Myosin cross-reactive antigen of Streptococcus pyogenes M49 encodes a fatty acid double bond hydratase that plays a role in oleic acid detoxification and bacterial virulence
Q61806062NBS-Encoding Genes in Evolved Rapidly After Allopolyploidization and Co-localize With Known Disease Resistance Loci
Q41233070NGS population genetics analyses reveal divergent evolution of a Lyme Borreliosis agent in Europe and Asia
Q34180989Na+-translocating membrane pyrophosphatases are widespread in the microbial world and evolutionarily precede H+-translocating pyrophosphatases.
Q91869197Nanopore Sequencing and De Novo Assembly of a Black-Shelled Pacific Oyster (Crassostrea gigas) Genome
Q89530775Nanopore sequencing-based genome assembly and evolutionary genomics of circum-basmati rice
Q36978738Natural Allelic Variations in Highly Polyploidy Saccharum Complex
Q43218001Natural Selection at the Brush-Border: Adaptations to Carbohydrate Diets in Humans and Other Mammals.
Q41859184Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana.
Q27332178Natural allelic variations of xenobiotic-metabolizing enzymes affect sexual dimorphism in Oryzias latipes
Q46816032Natural selection and functional diversification of the epidermal growth factor receptor EGFR family in vertebrates
Q83229462Natural selection and repeated patterns of molecular evolution following allopatric divergence
Q39217031Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq
Q34529805Natural selection drives rapid evolution of mouse embryonic heart enhancers
Q41838190Natural selection for nucleotide usage at synonymous and nonsynonymous sites in influenza A virus genes
Q33591079Natural selection maintains the transcribed LTR retrotransposons in Nosema bombycis
Q33881377Natural selection on cis and trans regulation in yeasts
Q34366773Natural selection on coding and noncoding DNA sequences is associated with virulence genes in a plant pathogenic fungus.
Q28477323Natural selection on functional modules, a genome-wide analysis
Q41971208Natural selection on gene function drives the evolution of LTR retrotransposon families in the rice genome
Q37458166Natural selection reduced diversity on human y chromosomes
Q34104619Nature and intensity of selection pressure on CRISPR-associated genes
Q47134309Negative correlation between rates of molecular evolution and flowering cycles in temperate woody bamboos revealed by plastid phylogenomics.
Q37126798Neighboring genes for DNA-binding proteins rescue male sterility in Drosophila hybrids
Q28659371Neither phylogenomic nor palaeontological data support a Palaeogene origin of placental mammals
Q89576044Neofunctionalization of the UCP1 mediated the non-shivering thermogenesis in the evolution of small-sized placental mammals
Q37255978Neofunctionalization of young duplicate genes in Drosophila
Q21093403Neogastropod phylogenetic relationships based on entire mitochondrial genomes
Q36238554Network Centrality Analysis in Fungi Reveals Complex Regulation of Lost and Gained Genes.
Q28477196Network models of TEM β-lactamase mutations coevolving under antibiotic selection show modular structure and anticipate evolutionary trajectories
Q36448921Network-Based Comparative Analysis of Arabidopsis Immune Responses to Golovinomyces orontii and Botrytis cinerea Infections.
Q45911044Neurexophilin 1 gene polymorphism in chickens and its variation among species.
Q37270438Neuropeptide diversity and the regulation of social behavior in New World primates
Q42631284Neurospora and the dead-end hypothesis: genomic consequences of selfing in the model genus
Q34107439Neutral and adaptive explanations for an association between caste-biased gene expression and rate of sequence evolution.
Q93005144New Insights into Long Terminal Repeat Retrotransposons in Mulberry Species
Q42292811New Insights on Leucine-Rich Repeats Receptor-Like Kinase Orthologous Relationships in Angiosperms
Q30391287New Perspectives on Ebola Virus Evolution
Q64066721New Zealand Tree and Giant Wētā (Orthoptera) Transcriptomics Reveal Divergent Selection Patterns in Metabolic Loci
Q91996207New bobtail squid (Sepiolidae: Sepiolinae) from the Ryukyu islands revealed by molecular and morphological analysis
Q42648679New cis-regulatory elements in the Rht-D1b locus region of wheat
Q38045819New genes expressed in human brains: implications for annotating evolving genomes
Q21143810New genomic structure for prostate cancer specific gene PCA3 within BMCC1: implications for prostate cancer detection and progression
Q33538348New insights into the evolution of subtilisin-like serine protease genes in Pezizomycotina
Q60907176New insights into the evolution of wheat avenin-like proteins in wild emmer wheat ()
Q97646586New insights into the evolutionary history of Megacodon: Evidence from a newly discovered species
Q35496794New insights into the evolutionary history of plant sorbitol dehydrogenase
Q64072933New insights into the origin and evolution of α-amylase genes in green plants
Q110697280New insights into the phylogeny and evolution of Podocarpaceae inferred from transcriptomic data
Q104559117New insights into the phylogeny and evolution of lady beetles (Coleoptera: Coccinellidae) by extensive sampling of genes and species
Q102319891New insights on the function of plant acyl carrier proteins from comparative and evolutionary analysis
Q52596070New methods for inferring the distribution of fitness effects for INDELs and SNPs.
Q34280795New molecular markers for fungal phylogenetics: two genes for species-level systematics in the Sordariomycetes (Ascomycota).
Q46271406New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication.
Q28743992Next generation sequencing and analysis of a conserved transcriptome of New Zealand's kiwi
Q35950446Next-generation genotyping of hypervariable loci in many individuals of a non-model species: technical and theoretical implications.
Q35201892Next-generation sequencing, phylogenetic signal and comparative mitogenomic analyses in Metacrangonyctidae (Amphipoda: Crustacea).
Q48165636Nicotinate O-Glucosylation Is an Evolutionarily Metabolic Trait Important for Seed Germination under Stress Conditions in Arabidopsis thaliana.
Q46518006No Evidence That Nitrogen Limitation Influences the Elemental Composition of Isopod Transcriptomes and Proteomes
Q34017918No evidence for natural selection on endogenous borna-like nucleoprotein elements after the divergence of Old World and New World monkeys
Q35533885No genome-wide protein sequence convergence for echolocation
Q35539678No recent adaptive selection on the apyrase of Mediterranean Phlebotomus: implications for using salivary peptides to vaccinate against canine leishmaniasis
Q63976744No signal of deleterious mutation accumulation in conserved gene sequences of extant asexual hexapods
Q42693340Nocturnal light environments influence color vision and signatures of selection on the OPN1SW opsin gene in nocturnal lemurs
Q46473372Non-canonical expression patterns and evolutionary rates of sex-biased genes in a seasonal fish
Q46653187Non-canonical structure, function and phylogeny of the Bsister MADS-box gene OsMADS30 of rice (Oryza sativa).
Q33371078Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs
Q64067971Non-host class II ribonucleotide reductase in Thermus viruses: sequence adaptation and host interaction
Q36233912Non-human Primate Schlafen11 Inhibits Production of Both Host and Viral Proteins
Q39585226Non-human primates avoid the detrimental effects of prenatal androgen exposure in mixed-sex litters: combined demographic, behavioral, and genetic analyses
Q34117059Non-negative matrix factorization for learning alignment-specific models of protein evolution
Q42262217Nonagricultural reservoirs contribute to emergence and evolution of Pseudomonas syringae crop pathogens
Q33853245Nonallelic gene conversion in the genus Drosophila
Q39758682Nondegenerative Evolution in Ancient Heritable Bacterial Endosymbionts of Fungi
Q28748999Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection
Q26762388Nonstructural Proteins Are Preferential Positive Selection Targets in Zika Virus and Related Flaviviruses
Q41997556Northern Spotted Owl (Strix occidentalis caurina) Genome: Divergence with the Barred Owl (Strix varia) and Characterization of Light-Associated Genes
Q92163057Not all birds have a single dominantly expressed MHC-I gene: Transcription suggests that siskins have many highly expressed MHC-I genes
Q46884468Not only for egg yolk--functional and evolutionary insights from expression, selection, and structural analyses of Formica ant vitellogenins.
Q28661447Not so pseudo: the evolutionary history of protein phosphatase 1 regulatory subunit 2 and related pseudogenes
Q91917742Not so unique to Primates: The independent adaptive evolution of TRIM5 in Lagomorpha lineage
Q41858294Notes on the birth-death prior with fossil calibrations for Bayesian estimation of species divergence times.
Q33916609Novel Drosophila viruses encode host-specific suppressors of RNAi
Q37104977Novel avian influenza A (H5N6) viruses isolated in migratory waterfowl before the first human case reported in China, 2014.
Q34019471Novel male-biased expression in paralogs of the aphid slimfast nutrient amino acid transporter expansion
Q111742431Novel mating-type-associated genes and gene fragments in the genomes of Mycosphaerellaceae and Teratosphaeriaceae fungi
Q35908925Nuclear introns outperform mitochondrial DNA in inter-specific phylogenetic reconstruction: Lessons from horseshoe bats (Rhinolophidae: Chiroptera).
Q44200549Nuclear–Mitochondrial Sequences as Witnesses of Past Interbreeding and Population Diversity in the Jumping Bristletail Mesomachilis
Q34531199Nucleoid-associated proteins affect mutation dynamics in E. coli in a growth phase-specific manner
Q44889049Nucleotide substitution analyses of the glaucophyte Cyanophora suggest an ancestrally lower mutation rate in plastid vs mitochondrial DNA for the Archaeplastida
Q98891749Nucleotide substitution rates of diatom plastid encoded protein genes are positively correlated with genome architecture
Q34011529Null mutations in human and mouse orthologs frequently result in different phenotypes
Q30653243Nutritional immunity. Escape from bacterial iron piracy through rapid evolution of transferrin
Q35569805OASes and STING: adaptive evolution in concert
Q34720592ODoSE: a webserver for genome-wide calculation of adaptive divergence in prokaryotes
Q57274404Oak genome reveals facets of long lifespan
Q28658356Obligate mutualism within a host drives the extreme specialization of a fig wasp genome
Q42131969Occult hepatitis B infection: an evolutionary scenario
Q35678315Occurrence of Isopenicillin-N-Synthase Homologs in Bioluminescent Ctenophores and Implications for Coelenterazine Biosynthesis.
Q61444905Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales
Q33815748Odorant binding proteins of the red imported fire ant, Solenopsis invicta: an example of the problems facing the analysis of widely divergent proteins
Q92131338Of eyes and embryos: subfunctionalization of the CRX homeobox gene in mammalian evolution
Q51154681Old but not (so) degenerated--slow evolution of largely homomorphic sex chromosomes in ratites.
Q90053818Olfactory receptor and circuit evolution promote host specialization
Q35185556On characterizing adaptive events unique to modern humans.
Q93020644On estimating evolutionary probabilities of population variants
Q37180363On the Origin of De Novo Genes in Arabidopsis thaliana Populations.
Q46332750On the brink: the highly reduced plastomes of nonphotosynthetic Ericaceae.
Q21559409On the diversity of malaria parasites in African apes and the origin of Plasmodium falciparum from Bonobos
Q46955287On the origin and evolution of plant brassinosteroid receptor kinases
Q37181896On the origin and evolutionary consequences of gene body DNA methylation
Q37490530On the origin and evolutionary history of NANOG.
Q28678692On the origins of Mendelian disease genes in man: the impact of gene duplication
Q59330121On the reconstruction of the ancestral bacterial genomes in genus Mycobacterium and Brucella
Q33883110On the utility of short intron sequences as a reference for the detection of positive and negative selection in Drosophila
Q22065293On universal common ancestry, sequence similarity, and phylogenetic structure: the sins of P-values and the virtues of Bayesian evidence
Q62506707One Hundred Mitochondrial Genomes of Cicadas
Q34415718One hundred twenty years of koala retrovirus evolution determined from museum skins
Q90911773One thousand plant transcriptomes and the phylogenomics of green plants
Q46299698One-third of the plastid genes evolved under positive selection in PACMAD grasses
Q55349044Ongoing Transposon-Mediated Genome Reduction in the Luminous Bacterial Symbionts of Deep-Sea Ceratioid Anglerfishes.
Q47821399Opsin evolution in damselfish: convergence, reversal, and parallel evolution across tuning sites.
Q37969451Opsin gene duplication and divergence in ray-finned fish
Q34201511Opsin gene sequence variation across phylogenetic and population histories in Mysis (Crustacea: Mysida) does not match current light environments or visual-pigment absorbance spectra
Q64991998Opsin genes of select treeshrews resolve ancestral character states within Scandentia.
Q39272893Opsins have evolved under the permanent heterozygote model: insights from phylotranscriptomics of Odonata
Q37169624Optimization of next-generation sequencing transcriptome annotation for species lacking sequenced genomes
Q46257018Origin and Evolution of the Bartonella Gene Transfer Agent.
Q90442648Origin and adaptation of green-sensitive (RH2) pigments in vertebrates
Q60930358Origin and development of oligoadenylate synthetase immune system
Q36273161Origin and diversification of leucine-rich repeat receptor-like protein kinase (LRR-RLK) genes in plants
Q36725702Origin and evolution of GATA2a and GATA2b in teleosts: insights from tongue sole, Cynoglossus semilaevis
Q84203096Origin and evolutionary analysis of the plant-specific TIFY transcription factor family
Q34917245Origin and functional diversification of an amphibian defense peptide arsenal
Q27023284Origin and proliferation of multiple-drug resistance in bacterial pathogens
Q57157400Origin and spread of Thoroughbred racehorses inferred from complete mitochondrial genome sequences: Phylogenomic and Bayesian coalescent perspectives
Q36354712Origin of an ancient hormone/receptor couple revealed by resurrection of an ancestral estrogen
Q95933849Origin of complexity in haemoglobin evolution
Q28606863Origin of marine planktonic cyanobacteria
Q28303276Origin of primate orphan genes: a comparative genomics approach
Q92317587Origin, evolution and functional characterization of the land plant glycoside hydrolase subfamily GH5_11
Q64091770Origination and selection of ABCDE and AGL6 subfamily MADS-box genes in gymnosperms and angiosperms
Q35185241Origins and functional diversification of salinity-responsive Na(+) , K(+) ATPase α1 paralogs in salmonids.
Q35882542Origins of De Novo Genes in Human and Chimpanzee
Q48064573Orthologous comparisons of the Hd1 region across genera reveal Hd1 gene lability within diploid Oryza species and disruptions to microsynteny in Sorghum
Q38994229Orthologous endogenous retroviruses exhibit directional selection since the chimp-human split
Q28730023Orthologous genes identified by transcriptome sequencing in the spider genus Stegodyphus
Q41740971Osmoadaptative Strategy and Its Molecular Signature in Obligately Halophilic Heterotrophic Protists
Q60199163Out of Water: The Origin and Early Diversification of Plant -Genes
Q28271010Out of southern East Asia: the natural history of domestic dogs across the world
Q41838018Out of the blue: adaptive visual pigment evolution accompanies Amazon invasion
Q36056473Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies
Q38749635Ovar-MHC Polymorphism in Malpura and Avikalin Sheep Vaccinated for Peste des Petits Ruminants (PPR) Virus.
Q33671537Overcoming the loss of blue sensitivity through opsin duplication in the largest animal group, beetles
Q35622517Overlapping Patterns of Rapid Evolution in the Nucleic Acid Sensors cGAS and OAS1 Suggest a Common Mechanism of Pathogen Antagonism and Escape
Q92067759Owls lack UV-sensitive cone opsin and red oil droplets, but see UV light at night: Retinal transcriptomes and ocular media transmittance
Q39507881Oxytocin and arginine vasopressin receptor evolution: implications for adaptive novelties in placental mammals
Q40888717Oxytocin receptor gene sequences in owl monkeys and other primates show remarkable interspecific regulatory and protein coding variation
Q30974626PALM: a paralleled and integrated framework for phylogenetic inference with automatic likelihood model selectors
Q35012269PAMLX: a graphical user interface for PAML.
Q36491514PGDD: a database of gene and genome duplication in plants
Q33806905PHAST and RPHAST: phylogenetic analysis with space/time models
Q45017028PLANT EVOLUTION. Convergent evolution of strigolactone perception enabled host detection in parasitic plants
Q30659607POTION: an end-to-end pipeline for positive Darwinian selection detection in genome-scale data through phylogenetic comparison of protein-coding genes
Q30855599Paleogenomics of echinoids reveals an ancient origin for the double-negative specification of micromeres in sea urchins
Q24635863Paleozoic origin of insect large dsDNA viruses
Q90352614Pan-genome analyses of 24 Shewanella strains re-emphasize the diversification of their functions yet evolutionary dynamics of metal-reducing pathway
Q35519950Pan-genome dynamics of Pseudomonas gene complements enriched across hexachlorocyclohexane dumpsite
Q34428816Pan-genomic analysis provides insights into the genomic variation and evolution of Salmonella Paratyphi A.
Q89644378Pan-mammalian analysis of molecular constraints underlying extended lifespan
Q64114575Pandoravirus Celtis Illustrates the Microevolution Processes at Work in the Giant Genomes
Q91802588Pangloss: A Tool for Pan-Genome Analysis of Microbial Eukaryotes
Q28591470Para-allopatry in hybridizing fire-bellied toads (Bombina bombina and B. variegata): Inference from transcriptome-wide coalescence analyses
Q41359165Parallel Evolution of Sperm Hyper-Activation Ca2+ Channels
Q21142668Parallel and convergent evolution of the dim-light vision gene RH1 in bats (Order: Chiroptera).
Q35768058Parallel duplication and partial subfunctionalization of β-catenin/armadillo during insect evolution.
Q101165964Parallel evolution in the emergence of highly pathogenic avian influenza A viruses
Q93101105Parallel evolution of HIV-1 in a long-term experiment
Q42234896Parallel evolution of IDH2 gene in cetaceans, primates and bats
Q28743501Parallel evolution of KCNQ4 in echolocating bats
Q27342991Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella
Q28727824Parallel evolution of auditory genes for echolocation in bats and toothed whales
Q35166337Parallel evolution of cox genes in H2S-tolerant fish as key adaptation to a toxic environment
Q33638908Parallel evolution of genes controlling mitonuclear balance in short-lived annual fishes
Q46629686Parallel evolution of the glycogen synthase 1 (muscle) gene Gys1 between Old World and New World fruit bats (Order: Chiroptera).
Q35195589Parallel faster-X evolution of gene expression and protein sequences in Drosophila: beyond differences in expression properties and protein interactions
Q58007598Parallel genome reduction in symbionts descended from closely related free-living bacteria
Q33471436Parallel loss of plastid introns and their maturase in the genus Cuscuta
Q34302452Parallel molecular evolution in an herbivore community
Q35769007Parallel molecular routes to cold adaptation in eight genera of New Zealand stick insects
Q92212128Parallel selection on ecologically relevant gene functions in the transcriptomes of highly diversifying salmonids
Q28730510Parallel signatures of sequence evolution among hearing genes in echolocating mammals: an emerging model of genetic convergence
Q90300454Paralog dependency indirectly affects the robustness of human cells
Q64087586Paralogues From the Expanded Tlr11 Gene Family in Mudskipper () Are Under Positive Selection and Respond Differently to LPS/Poly(I:C) Challenge
Q46820113Parasite load and MHC diversity in undisturbed and agriculturally modified habitats of the ornate dragon lizard.
Q34351963Parasitic plants have increased rates of molecular evolution across all three genomes
Q50954596Parent-progeny sequencing indicates higher mutation rates in heterozygotes.
Q64267624Paternally Expressed Imprinted Genes under Positive Darwinian Selection in Arabidopsis thaliana
Q42688947Pathway evolution by horizontal transfer and positive selection is accommodated by relaxed negative selection upon upstream pathway genes in purple bacterial carotenoid biosynthesis
Q46253271Patterns and Consequences of Subgenome Differentiation Provide Insights into the Nature of Paleopolyploidy in Plants.
Q96303390Patterns and Rates of Plastid rps12 Gene Evolution Inferred in a Phylogenetic Context using Plastomic Data of Ferns
Q30388274Patterns of MHC-G-Like and MHC-B Diversification in New World Monkeys
Q39424995Patterns of Substitution Rate Variation at Many Nuclear Loci in Two Species Trios in the Brassicaceae Partitioned with ANOVA.
Q34875855Patterns of adaptive and neutral diversity identify the Xiaoxiangling mountains as a refuge for the giant panda
Q91713316Patterns of gene evolution following duplications and speciations in vertebrates
Q28652363Patterns of genetic variation and the role of selection in HTR1A and HTR1B in macaques (Macaca)
Q84580474Patterns of molecular evolution and predicted function in thaumatin-like proteins of Populus trichocarpa
Q34315117Patterns of molecular evolution in dioecious and non-dioecious Silene
Q46948466Patterns of molecular evolution of the germ line specification gene oskar suggest that a novel domain may contribute to functional divergence in Drosophila
Q35814781Patterns of natural selection acting on the mitochondrial genome of a locally adapted fish species
Q28657708Patterns of positive selection in seven ant genomes
Q35126539Patterns of positive selection of the myogenic regulatory factor gene family in vertebrates
Q31084741Patterns of selection and polymorphism of innate immunity genes in bumblebees (Hymenoptera: Apidae).
Q36596494Patterns of transcriptome divergence in the male accessory gland of two closely related species of field crickets.
Q35179701Patterns of variation at Ustilago maydis virulence clusters 2A and 19A largely reflect the demographic history of its populations
Q43558909Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments.
Q82693137Peculiar patterns of amino acid substitution and conservation in the fast evolving tunicate Oikopleura dioica
Q36939982Peeling back the evolutionary layers of molecular mechanisms responsive to exercise-stress in the skeletal muscle of the racing horse.
Q22122080Peregrine and saker falcon genome sequences provide insights into evolution of a predatory lifestyle
Q28751882Performance of relaxed-clock methods in estimating evolutionary divergence times and their credibility intervals
Q35019305Performance of standard and stochastic branch-site models for detecting positive selection among coding sequences
Q83194497Pericentromeric effects shape the patterns of divergence, retention, and expression of duplicated genes in the paleopolyploid soybean
Q92709181Peroxidase evolution in white-rot fungi follows wood lignin evolution in plants
Q61449168Persistence and Microevolution of in the Cystic Fibrosis Lung: A Single-Patient Longitudinal Genomic Study
Q37247032Pervasive, genome-wide positive selection leading to functional divergence in the bacterial genus Campylobacter.
Q101166867Phased diploid genome assemblies and pan-genomes provide insights into the genetic history of apple domestication
Q42856203Phenotype prediction of nonsynonymous single nucleotide polymorphisms in human phase II drug/xenobiotic metabolizing enzymes: perspectives on molecular evolution
Q42001479Pheromone receptor evolution in the cryptic leafroller species, Ctenopseustis obliquana and C. herana.
Q28651576Phosphoenolpyruvate carboxykinase 1 gene (Pck1) displays parallel evolution between Old World and New World fruit bats
Q38253762Phosphorylation network rewiring by gene duplication
Q41877586PhyleasProg: a user-oriented web server for wide evolutionary analyses.
Q35075655Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing
Q28553329PhyloBot: A Web Portal for Automated Phylogenetics, Ancestral Sequence Reconstruction, and Exploration of Mutational Trajectories
Q35051859PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions
Q33876840PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Q34455526Phylodynamic analysis of clinical and environmental Vibrio cholerae isolates from Haiti reveals diversification driven by positive selection
Q37031869Phylodynamics of H1N1/2009 influenza reveals the transition from host adaptation to immune-driven selection
Q35072788Phylodynamics of the emergence of influenza viruses after cross-species transmission
Q35797366Phylogenesis and Biological Characterization of a New Glucose Transporter in the Chicken (Gallus gallus), GLUT12.
Q92854698Phylogenetic Analysis and Substitution Rate Estimation of Colonial Volvocine Algae Based on Mitochondrial Genomes
Q36051905Phylogenetic Analysis, Lineage-Specific Expansion and Functional Divergence of seed dormancy 4-Like Genes in Plants
Q37487949Phylogenetic Gaussian process model for the inference of functionally important regions in protein tertiary structures
Q36243545Phylogenetic Origin and Diversification of RNAi Pathway Genes in Insects
Q27333622Phylogenetic Patterns of Codon Evolution in the ACTIN-DEPOLYMERIZING FACTOR/COFILIN (ADF/CFL) Gene Family
Q90278145Phylogenetic analyses of key developmental genes provide insight into the complex evolution of seeds
Q33649437Phylogenetic analyses provide the first insights into the evolution of OVATE family proteins in land plants
Q28597208Phylogenetic analyses reveal molecular signatures associated with functional divergence among Subtilisin like Serine Proteases are linked to lifestyle transitions in Hypocreales
Q41899878Phylogenetic analyses uncover a novel clade of transferrin in nonmammalian vertebrates
Q28754609Phylogenetic analyses: A toolbox expanding towards Bayesian methods
Q33475197Phylogenetic analysis and molecular evolution of the dormancy associated MADS-box genes from peach
Q37691758Phylogenetic analysis of ligninolytic peroxidases: preliminary insights into the alternation of white-rot and brown-rot fungi in their lineage
Q21283833Phylogenetic analysis of mitochondrial substitution rate variation in the angiosperm tribe Sileneae
Q33698738Phylogenetic analysis of the NEEP21/calcyon/P19 family of endocytic proteins: evidence for functional evolution in the vertebrate CNS.
Q36509118Phylogenetic analysis suggests that sociality is associated with reduced effectiveness of selection
Q21283927Phylogenetic analysis, structural evolution and functional divergence of the 12-oxo-phytodienoate acid reductase gene family in plants
Q38728336Phylogenetic and Evolutionary Analysis of Plant ARGONAUTES.
Q28474606Phylogenetic and evolutionary patterns in microbial carotenoid biosynthesis are revealed by comparative genomics
Q41645827Phylogenetic and structural analysis of the phospholipase A2 gene family in vertebrates
Q34674470Phylogenetic and structural diversity in the feline leukemia virus env gene.
Q33813059Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift
Q46247720Phylogenetic distribution of CMP-Neu5Ac hydroxylase (CMAH), the enzyme synthetizing the pro-inflammatory human xeno-antigen Neu5Gc.
Q44759259Phylogenetic estimation of timescales using ancient DNA: the effects of temporal sampling scheme and uncertainty in sample ages.
Q36074210Phylogenetic incongruence and the evolutionary origins of cardenolide-resistant forms of Na(+) ,K(+) -ATPase in Danaus butterflies
Q33953353Phylogenetic incongruence arising from fragmented speciation in enteric bacteria
Q33495765Phylogenetic inference under varying proportions of indel-induced alignment gaps
Q51847749Phylogenetic inference with weighted codon evolutionary distances.
Q43787722Phylogenetic networks to study the origin and evolution of porcine circovirus type 2 (PCV2) in Cuba.
Q47205351Phylogenetic relationships and estimation of divergence times among Sisoridae catfishes
Q30388346Phylogenetic relationships and protein modelling revealed two distinct subfamilies of group II HKT genes between crop and model grasses
Q116816835Phylogenetic relationships of Brachycera (Insecta: Diptera) inferred from mitochondrial genome sequences
Q40418939Phylogenetic relationships of Hemiptera inferred from mitochondrial and nuclear genes
Q89576280Phylogenetic relationships of the Chinese torrent frogs (Ranidae: Amolops) revealed by phylogenomic analyses of AFLP-Capture data
Q33531834Phylogenetics applied to genotype/phenotype association and selection analyses with sequence data from angptl4 in humans
Q91957984Phylogenetics is the New Genetics (for Most of Biodiversity)
Q55871724Phylogenetics, divergence times and diversification from three genomic partitions in monocots
Q36651179Phylogenic analysis of adhesion related genes Mad1 revealed a positive selection for the evolution of trapping devices of nematode-trapping fungi
Q33813160Phylogenomic Analysis and Dynamic Evolution of Chloroplast Genomes in Salicaceae
Q104581337Phylogenomic Insights into Deep Phylogeny of Angiosperms Based on Broad Nuclear Gene Sampling
Q49277100Phylogenomic Perspective on the Relationships and Evolutionary History of the Major Otocephalan Lineages.
Q28601349Phylogenomic analyses of bat subordinal relationships based on transcriptome data
Q28654323Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda
Q21559625Phylogenomic analyses of nuclear genes reveal the evolutionary relationships within the BEP clade and the evidence of positive selection in Poaceae
Q35873085Phylogenomic analyses reveal a molecular signature linked to subterranean adaptation in rodents
Q21245376Phylogenomic analyses support the position of turtles as the sister group of birds and crocodiles (Archosauria)
Q55381643Phylogenomic analysis of Apoidea sheds new light on the sister group of bees.
Q28597060Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye
Q110697342Phylogenomic analysis of evolutionary relationships in Ranitomeya poison frogs (Family Dendrobatidae) using ultraconserved elements
Q34318233Phylogenomic analysis reveals dynamic evolutionary history of the Drosophila heterochromatin protein 1 (HP1) gene family
Q43070894Phylogenomic analysis reveals genome-wide purifying selection on TBE transposons in the ciliate Oxytricha
Q45334159Phylogenomic and structural modeling analyses of the PsbP superfamily reveal multiple small segment additions in the evolution of photosystem II-associated PsbP protein in green plants
Q28729195Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny
Q28603495Phylogenomic evidence for ancient hybridization in the genomes of living cats (Felidae)
Q35677607Phylogenomic identification of regulatory sequences in bacteria: an analysis of statistical power and an application to Borrelia burgdorferi sensu lato
Q96225510Phylogenomic insights into the temporal-spatial divergence history, evolution of leaf habit and hybridization in Stachyurus (Stachyuraceae)
Q39824116Phylogenomic networks reveal limited phylogenetic range of lateral gene transfer by transduction
Q28728264Phylogenomic resolution of paleozoic divergences in harvestmen (Arachnida, Opiliones) via analysis of next-generation transcriptome data
Q28600841Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation
Q110951307Phylogenomics and Fossil Data Inform the Systematics and Geographic Range Evolution of a Diverse Neotropical Ant Lineage
Q111742428Phylogenomics and historical biogeography of the cleptoparasitic bee genus Nomada (Hymenoptera: Apidae) using ultraconserved elements
Q111629892Phylogenomics and rapid diversification of the genus Eutrema on the Qinghai–Tibet Plateau and adjacent regions
Q28679174Phylogenomics and taxonomy of Lecomtelleae (Poaceae), an isolated panicoid lineage from Madagascar
Q60312628Phylogenomics and the evolution of hemipteroid insects
Q90096901Phylogenomics disentangles the evolutionary history of spruces (Picea) in the Qinghai-Tibetan Plateau: Implications for the design of population genetic studies and species delimitation of conifers
Q110857796Phylogenomics of Brosimum (Moraceae) and allied genera, including a revised subgeneric system
Q116673268Phylogenomics of alligator lizards elucidate diversification patterns across the Mexican Transition Zone and support the recognition of a new genus
Q27496561Phylogenomics of strongylocentrotid sea urchins
Q27312554Phylogenomics of unusual histone H2A Variants in Bdelloid rotifers
Q118110143Phylogenomics reconciles molecular data with the rich fossil record on the origin of living turtles
Q89169838Phylogenomics resolves the deep phylogeny of seed plants and indicates partial convergent or homoplastic evolution between Gnetales and angiosperms
Q111742459Phylogenomics resolves timing and patterns in the evolution of Australasian Cerambycinae (Coleoptera: Cerambycidae), and reveals new insights into the subfamily-level classification and historical biogeography of longhorn beetles
Q34558456Phylogenomics reveals rapid, simultaneous diversification of three major clades of Gondwanan frogs at the Cretaceous-Paleogene boundary.
Q90856597Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths
Q91525212Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution
Q58756329Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes
Q91340206Phylogenomics, biogeography, and adaptive radiation of grapes
Q39393245Phylogeny and Expression Analyses Reveal Important Roles for Plant PKS III Family during the Conquest of Land by Plants and Angiosperm Diversification
Q28744331Phylogeny and adaptive evolution of the brain-development gene microcephalin (MCPH1) in cetaceans
Q36378979Phylogeny and biogeography of the genus Stevia (Asteraceae: Eupatorieae): an example of diversification in the Asteraceae in the new world.
Q28706200Phylogeny and chronology of the major lineages of New World hystricognath rodents: insights on the biogeography of the Eocene/Oligocene arrival of mammals in South America
Q48072129Phylogeny and evolution of the NS1 and VP1/VP2 gene sequences from porcine parvovirus
Q91179944Phylogeny and evolutionary history of Pinaceae updated by transcriptomic analysis
Q42246823Phylogeny and genetic diversity of foot and mouth disease virus serotype Asia1 in India during 1964-2012.
Q92943294Phylogeny and highland adaptation of Chinese species in Allium section Daghestanica (Amaryllidaceae) revealed by transcriptome sequencing
Q30768705Phylogeny and molecular evolution analysis of PIN-FORMED 1 in angiosperm
Q36183621Phylogeny mandalas for illustrating the Tree of Life
Q64079109Phylogeny of Chinese Species in Section and Adaptive Evolution of (Amaryllidaceae, Allioideae) Species Revealed by the Chloroplast Complete Genome
Q91758896Phylogeny of Diplazium (Athyriaceae) revisited: Resolving the backbone relationships based on plastid genomes and phylogenetic tree space analysis
Q46966143Phylogeny of Leavenworthia S-alleles suggests unidirectional mating system evolution and enhanced positive selection following an ancient population bottleneck
Q35747058Phylogeny of galactolipid synthase homologs together with their enzymatic analyses revealed a possible origin and divergence time for photosynthetic membrane biogenesis.
Q47815476Phylogeny of microcystins: evidence of a biogeographical trend?
Q34281574Phylogeny reconstruction in the Caesalpinieae grade (Leguminosae) based on duplicated copies of the sucrose synthase gene and plastid markers
Q42019472Phylogeny, biogeography, and host-plant association in the subfamily Apaturinae (Insecta: Lepidoptera: Nymphalidae) inferred from eight nuclear and seven mitochondrial genes.
Q52329842Phylogeny, evolution and mitochondrial gene order rearrangement in scale worms (Aphroditiformia, Annelida).
Q96683704Phylogeny, evolution, and potential ecological relationship of cytochrome CYP52 enzymes in Saccharomycetales yeasts
Q34032255Phylogeny, rate variation, and genome size evolution of Pelargonium (Geraniaceae).
Q28607260Phylogeographic and Demographic Analysis of the Asian Black Bear (Ursus thibetanus) Based on Mitochondrial DNA
Q36124012Phylogeographic differentiation versus transcriptomic adaptation to warm temperatures in Zostera marina, a globally important seagrass
Q39172277Phylogeography and bindin evolution in Arbacia, a sea urchin genus with an unusual distribution.
Q34289100Phylogeography and molecular evolution of potato virus Y.
Q36346150Phylogeography of Sophora moorcroftiana Supports Wu's Hypothesis on the Origin of Tibetan Alpine Flora
Q37642717Phylointeractomics reconstructs functional evolution of protein binding
Q100569654Phylomitogenomics provide new perspectives on the Euphasmatodea radiation (Insecta: Phasmatodea)
Q58546898Phylotranscriptomic insights into the diversification of endothermic Thunnus tunas
Q111629740Phylotranscriptomics reveals extensive gene duplication in the subtribe Gentianinae (Gentianaceae)
Q104693649Phylotranscriptomics reveals the complex evolutionary and biogeographic history of the genus Tsuga with an East Asian-North American disjunct distribution
Q110697369Phylotranscriptomics reveals the evolutionary history of subtropical East Asian white pines: further insights into gymnosperm diversification
Q48064661Physicochemical evolution and positive selection of the gymnosperm matK proteins
Q28109686Phytochrome Interacting Factors (PIFs) in Solanum lycopersicum: Diversity, Evolutionary History and Expression Profiling during Different Developmental Processes
Q42329803Phytoplasma classification and phylogeny based on in silico and in vitro RFLP analysis of cpn60 universal target sequences
Q33383003Pilus operon evolution in Streptococcus pneumoniae is driven by positive selection and recombination
Q46668932Pivotal Advance: Avian colony-stimulating factor 1 (CSF-1), interleukin-34 (IL-34), and CSF-1 receptor genes and gene products
Q48310974Plant Actin-Depolymerizing Factors Possess Opposing Biochemical Properties Arising from Key Amino Acid Changes throughout Evolution.
Q30833551Plant genomes enclose footprints of past infections by giant virus relatives
Q41018254Plant manipulation through gall formation constrains amino acid transporter evolution in sap-feeding insects.
Q36281604Plasmid diversity and phylogenetic consistency in the Lyme disease agent Borrelia burgdorferi
Q37137844Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade
Q56341393Plasmodium vivax-like genome sequences shed new insights into Plasmodium vivax biology and evolution
Q34493203Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots
Q110697370Plastid phylogenomics of the Sansevieria Clade of Dracaena (Asparagaceae) resolves a recent radiation
Q37090550Plastid-Nuclear Interaction and Accelerated Coevolution in Plastid Ribosomal Genes in Geraniaceae
Q94464404Plastome Evolution in Dolomiaea (Asteraceae, Cardueae) Using Phylogenomic and Comparative Analyses
Q96135690Plastome Structural Conservation and Evolution in the Clusioid Clade of Malpighiales
Q46292722Plastome evolution in the sole hemiparasitic genus laurel dodder (Cassytha) and insights into the plastid phylogenomics of Lauraceae
Q57143777Plastome organization, genome-based phylogeny and evolution of plastid genes in Podophylloideae (Berberidaceae)
Q36283273Plastome phylogeny and early diversification of Brassicaceae
Q64901557Plastome phylogeny and lineage diversification of Salicaceae with focus on poplars and willows.
Q57143810Plastome sequences and exploration of tree-space help to resolve the phylogeny of riceflowers (Thymelaeaceae: Pimelea)
Q37061864Plastome sequences of Lygodium japonicum and Marsilea crenata reveal the genome organization transformation from basal ferns to core leptosporangiates
Q38843318Plastome-Wide Nucleotide Substitution Rates Reveal Accelerated Rates in Papilionoideae and Correlations with Genome Features Across Legume Subfamilies
Q120162458Plastome-based phylogenomics elucidate relationships in rare Isoëtes species groups from the Neotropics
Q90337148Plastome-based phylogenomics resolves the placement of the sanguinolenta group in the spikemoss of lycophyte (Selaginellaceae)
Q92922187Plateau Grass and Greenhouse Flower? Distinct Genetic Basis of Closely Related Toad Tadpoles Respectively Adapted to High Altitude and Karst Caves
Q35925304Pleistocene divergence across a mountain range and the influence of selection on mitogenome evolution in threatened Australian freshwater cod species
Q38736081Pneumococcal capsule synthesis locus cps as evolutionary hotspot with potential to generate novel serotypes by recombination.
Q57801290PoSE: visualization of patterns of sequence evolution using PAML and MATLAB
Q37616522Polar bears exhibit genome-wide signatures of bioenergetic adaptation to life in the arctic environment
Q45112863Pollen-specific, but not sperm-specific, genes show stronger purifying selection and higher rates of positive selection than sporophytic genes in Capsella grandiflora
Q35826191Polymorphism Analysis Reveals Reduced Negative Selection and Elevated Rate of Insertions and Deletions in Intrinsically Disordered Protein Regions
Q90029427Polymorphism Data Assist Estimation of the Nonsynonymous over Synonymous Fixation Rate Ratio ω for Closely Related Species
Q91603926Polymorphism analyses and protein modelling inform on functional specialization of Piwi clade genes in the arboviral vector Aedes albopictus
Q37610071Polymorphism in the major histocompatibility complex (MHC class II B) genes of the Rufous-backed Bunting (Emberiza jankowskii)
Q90098391Polymorphism of MHC class IIB in an acheilognathid species, Rhodeus sinensis shaped by historical selection and recombination
Q34380745Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria.
Q28654226Polyploid evolution of the Brassicaceae during the Cenozoic era
Q38509287Population Analysis of Iranian Potato virus Y Isolates Using Complete Genome Sequence
Q90303816Population Genetics Based Phylogenetics Under Stabilizing Selection for an Optimal Amino Acid Sequence: A Nested Modeling Approach
Q35882517Population Genetics of Nosema apis and Nosema ceranae: One Host (Apis mellifera) and Two Different Histories.
Q64117276Population Genetics of Paramecium Mitochondrial Genomes: Recombination, Mutation Spectrum, and Efficacy of Selection
Q89183560Population Genomics Provide Insights into the Evolution and Adaptation of the Eastern Honey Bee (Apis cerana)
Q28652649Population Genomics of Human Adaptation
Q38465988Population dynamics and ORF3 gene evolution of porcine circovirus type 2 circulating in Korea.
Q40281096Population dynamics of DENV-1 genotype V in Brazil is characterized by co-circulation and strain/lineage replacement
Q33525704Population dynamics of Neisseria gonorrhoeae in Shanghai, China: a comparative study
Q88428860Population genetics, phylogenomics and hybrid speciation of Juglans in China determined from whole chloroplast genomes, transcriptomes, and genotyping-by-sequencing (GBS)
Q28757646Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation
Q34472511Population genomic analysis reveals highly conserved mitochondrial genomes in the yeast species Lachancea thermotolerans
Q55054382Population genomic data reveal genes related to important traits of quail.
Q36387327Population genomics of Chlamydia trachomatis: insights on drift, selection, recombination, and population structure.
Q40676254Population genomics of eusocial insects: the costs of a vertebrate-like effective population size.
Q33730648Population genomics of intron splicing in 38 Saccharomyces cerevisiae genome sequences
Q34740783Population genomics reveals chromosome-scale heterogeneous evolution in a protoploid yeast
Q48205813Population size may shape the accumulation of functional mutations following domestication
Q30911714Population structure of Neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance
Q35660467Population structure of mitochondrial genomes in Saccharomyces cerevisiae
Q34365168Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex.
Q89699460Population-specific, recent positive directional selection suggests adaptation of human male reproductive genes to different environmental conditions
Q38882227PosiGene: automated and easy-to-use pipeline for genome-wide detection of positively selected genes
Q38601984Position Matters: Network Centrality Considerably Impacts Rates of Protein Evolution in the Human Protein-Protein Interaction Network
Q84660586Positive Darwinian selection drives the evolution of the morphology-related gene, EPCAM, in particularly species-rich lineages of African cichlid fishes
Q34039416Positive Darwinian selection in the piston that powers proton pumps in complex I of the mitochondria of Pacific salmon
Q40093184Positive Selection Drives Evolution at the Host-Filovirus Interaction Surface
Q55164117Positive Selection Driving Cytoplasmic Genome Evolution of the Medicinally Important Ginseng Plant Genus Panax.
Q60046421Positive Selection Drove the Adaptation of Mitochondrial Genes to the Demands of Flight and High-Altitude Environments in Grasshoppers
Q91880089Positive Selection Evidence in Xylose-Related Genes Suggests Methylglyoxal Reductase as a Target for the Improvement of Yeasts' Fermentation in Industry
Q38442875Positive Selection Linked with Generation of Novel Mammalian Dentition Patterns.
Q36105682Positive Selection Pressure Drives Variation on the Surface-Exposed Variable Proteins of the Pathogenic Neisseria
Q36077811Positive Selection Underlies Faster-Z Evolution of Gene Expression in Birds.
Q40013436Positive Selection and Centrality in the Yeast and Fly Protein-Protein Interaction Networks
Q21285136Positive Selection and the Evolution of izumo Genes in Mammals
Q30275665Positive Selection in Rapidly Evolving Plastid-Nuclear Enzyme Complexes
Q58109083Positive Selection in the Evolution of Mammalian CRISPs
Q61738139Positive Selection of the Bat Interferon Alpha Gene Family
Q56786857Positive Selection on HIV Accessory Proteins and the Analysis of Molecular Adaptation After Interspecies Transmission
Q57132733Positive and balancing selection on gene associated with psychiatric disorders and human-unique personality traits
Q39017846Positive and purifying selection in mitochondrial genomes of a bird with mitonuclear discordance
Q34200949Positive and purifying selection influence the evolution of doublesex in the Anastrepha fraterculus species group
Q34201849Positive and purifying selection on the Drosophila Y chromosome
Q42271293Positive and relaxed selection associated with flight evolution and loss in insect transcriptomes
Q35060758Positive evolutionary selection on the RIG-I-like receptor genes in mammals
Q57086541Positive selection adaptation of two-domain arginine kinase (AK) from cold seep Vesicomyidae clams
Q60483892Positive selection and climatic effects on MHC class II gene diversity in hares (Lepus capensis) from a steep ecological gradient
Q46262726Positive selection and comparative molecular evolution of reproductive proteins from New Zealand tree weta (Orthoptera, Hemideina).
Q35381435Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae).
Q44253281Positive selection and intragenic recombination contribute to high allelic diversity in effector genes of Mycosphaerella fijiensis, causal agent of the black leaf streak disease of banana.
Q58711843Positive selection at sites of chemosensory genes is associated with the recent divergence and local ecological adaptation in cactophilic Drosophila
Q55314908Positive selection at the ASPM gene coincides with brain size enlargements in cetaceans.
Q30391325Positive selection differs between protein secondary structure elements in Drosophila
Q36057895Positive selection drives adaptive diversification of the 4-coumarate: CoA ligase (4CL) gene in angiosperms
Q34005751Positive selection drives faster-Z evolution in silkmoths
Q57098806Positive selection drives lactoferrin evolution in mammals
Q46784262Positive selection drives neofunctionalization of the UbiA prenyltransferase gene family
Q55322262Positive selection drives the evolution of endocrine regulatory bone morphogenetic protein system in mammals.
Q34402745Positive selection during the evolution of the blood coagulation factors in the context of their disease-causing mutations
Q30875924Positive selection for the male functionality of a co-retroposed gene in the hominoids
Q35023540Positive selection in bone morphogenetic protein 15 targets a natural mutation associated with primary ovarian insufficiency in human
Q58699339Positive selection in coding regions and motif duplication in regulatory regions of bottlenose dolphin MHC class II genes
Q92882208Positive selection in dNTPase SAMHD1 throughout mammalian evolution
Q35748005Positive selection in development and growth rate regulation genes involved in species divergence of the genus Radix
Q57898857Positive selection in extra cellular domains in the diversification of Strigamia maritima chemoreceptors
Q35002388Positive selection in glycolysis among Australasian stick insects
Q37354165Positive selection in nucleoporins challenges constraints on early expressed genes in Drosophila development
Q35002432Positive selection in the adhesion domain of Mus sperm Adam genes through gene duplications and function-driven gene complex formations
Q35003899Positive selection in the hemagglutinin-neuraminidase gene of Newcastle disease virus and its effect on vaccine efficacy
Q33611114Positive selection of HIV host factors and the evolution of lentivirus genes
Q33860110Positive selection of Kranz and non-Kranz C4 phosphoenolpyruvate carboxylase amino acids in Suaedoideae (Chenopodiaceae).
Q39505928Positive selection of Toll-like receptor 2 polymorphisms in two closely related old world monkey species, rhesus and Japanese macaques
Q33456466Positive selection on MHC class II DRB and DQB genes in the bank vole (Myodes glareolus).
Q47201484Positive selection on NIN, a gene involved in neurogenesis, and primate brain evolution
Q39535480Positive selection on a bacterial oncoprotein associated with gastric cancer
Q37660670Positive selection on apoptosis related genes
Q47562336Positive selection on human gamete-recognition genes
Q36109572Positive selection on panpulmonate mitogenomes provide new clues on adaptations to terrestrial life
Q40367074Positive selection on sperm ion channels in a brooding brittle star: consequence of life-history traits evolution.
Q35441278Positive selection on the K domain of the AGAMOUS protein in the Zingiberales suggests a mechanism for the evolution of androecial morphology.
Q47073591Positive selection pressure within teleost Toll-like receptors tlr21 and tlr22 subfamilies and their response to temperature stress and microbial components in zebrafish.
Q33939363Positive selection shaped the convergent evolution of independently expanded kallikrein subfamilies expressed in mouse and rat saliva proteomes
Q40300047Positive selection sites in the surface genes of dengue virus: phylogenetic analysis of the interserotypic branches of the four serotypes
Q40612771Positive selection underlies the species-specific binding of Plasmodium falciparum RH5 to human basigin.
Q36543218Positive selection within a diatom species acts on putative protein interactions and transcriptional regulation
Q41577456Positively selected amino acid replacements within the RuBisCO enzyme of oak trees are associated with ecological adaptations
Q49489026Positively selected effector genes and their contribution to virulence in the smut fungus Sporisorium reilianum.
Q41371873Positively selected genes of the Chinese tree shrew (Tupaia belangeri chinensis) locomotion system
Q28595165Possible Roles of New Mutations Shared by Asian and American Zika Viruses
Q37306572Possible diversifying selection in the imprinted gene, MEDEA, in Arabidopsis
Q45665233Possible mechanisms responsible for absence of a retrotransposon family on a plant Y chromosome.
Q93075416Post K-Pg diversification of the mammalian order Eulipotyphla as suggested by phylogenomic analyses of ultra-conserved elements
Q58103254Postcopulatory sexual selection reduces Z-linked genetic variation and might contribute to the large Z effect in passerine birds
Q60949736Powdery Mildews Are Characterized by Contracted Carbohydrate Metabolism and Diverse Effectors to Adapt to Obligate Biotrophic Lifestyle
Q35920941Practical Approaches for Detecting Selection in Microbial Genomes
Q36193142Predictable convergence in hemoglobin function has unpredictable molecular underpinnings
Q38654447Predicting Amino Acid Substitution Probabilities Using Single Nucleotide Polymorphisms
Q92405354Predicting Specificities Under the Non-self Gametophytic Self-Incompatibility Recognition Model
Q33519499Predicting functional alternative splicing by measuring RNA selection pressure from multigenome alignments
Q46966758Predicting genetic and ecological characteristics of bacterial species by comparing the trajectories of dN/dS and dI/dS in bacterial genomes
Q30356923Predicting the emergence of H3N2 influenza viruses reveals contrasted modes of evolution of HA and NA antigens.
Q111629806Preferential retention of the slowly evolving gene in pairs of duplicates in angiosperm genomes
Q54767043Prenatal development supports a single origin of laryngeal echolocation in bats.
Q36123528Presence versus absence of CYP734A50 underlies the style-length dimorphism in primroses.
Q28652840Preservation of genetic and regulatory robustness in ancient gene duplicates of Saccharomyces cerevisiae
Q42200747Prevalence of HPV and variation of HPV 16/HPV 18 E6/E7 genes in cervical cancer in women in South West China
Q64124119Prevalence of cryptic species in morphologically uniform taxa - Fast speciation and evolutionary radiation in Asian frogs
Q40577986Prevalence of multinucleotide replacements in evolution of primates and Drosophila.
Q34055313Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes
Q89866795Prickly waterlily and rigid hornwort genomes shed light on early angiosperm evolution
Q30421140Primate evolution of the recombination regulator PRDM9
Q28658139Primate phylogenetic relationships and divergence dates inferred from complete mitochondrial genomes
Q36658872Probing the promiscuity of ent-kaurene oxidases via combinatorial biosynthesis
Q41992340Processing and population genetic analysis of multigenic datasets with ProSeq3 software.
Q35260522Profound differences in virus population genetics correspond to protection from CD4 decline resulting from feline lentivirus coinfection
Q91558589Programmed DNA elimination of germline development genes in songbirds
Q39212080Progressive and Biased Divergent Evolution Underpins the Origin and Diversification of Peridinin Dinoflagellate Plastids.
Q28297261Progressive pseudogenization: vitamin C synthesis and its loss in bats
Q41633957Prokaryotic and Highly-Repetitive WD40 Proteins: A Systematic Study
Q37383302Proliferation of group II introns in the chloroplast genome of the green alga Oedocladium carolinianum (Chlorophyceae).
Q41995893Prolonged Adaptive Evolution of a Defensive Gene in the Solanaceae
Q28749670Promiscuity and the rate of molecular evolution at primate immunity genes
Q30530907Protein biophysics explains why highly abundant proteins evolve slowly
Q33911778Protein coalitions in a core mammalian biochemical network linked by rapidly evolving proteins
Q51234126Protein conformational diversity correlates with evolutionary rate.
Q30577195Protein evolution in two co-occurring types of Symbiodinium: an exploration into the genetic basis of thermal tolerance in Symbiodinium clade D
Q34491472Protein evolution of Toll-like receptors 4, 5 and 7 within Galloanserae birds
Q42314462Protein interaction evolution from promiscuity to specificity with reduced flexibility in an increasingly complex network
Q39910707Protein kinase R reveals an evolutionary model for defeating viral mimicry
Q35101254Protein structural modularity and robustness are associated with evolvability.
Q42251421Protein subcellular relocalization of duplicated genes in Arabidopsis
Q30605118Protein-protein interfaces from cytochrome c oxidase I evolve faster than nonbinding surfaces, yet negative selection is the driving force.
Q35114548Proteins involved in motility and sperm-egg interaction evolve more rapidly in mouse spermatozoa
Q37738651Proteome Evolution of Deep-Sea Hydrothermal Vent Alvinellid Polychaetes Supports the Ancestry of Thermophily and Subsequent Adaptation to Cold in Some Lineages
Q34259703Proteome-wide analysis of functional divergence in bacteria: exploring a host of ecological adaptations
Q36926540Proteome-wide discovery of evolutionary conserved sequences in disordered regions
Q39183554Proteome-wide evidence for enhanced positive Darwinian selection within intrinsically disordered regions in proteins
Q83231225Proteome-wide signatures of function in highly diverged intrinsically disordered regions
Q42656860Proteomic and UTR analyses of a rapidly evolving hypervariable family of vertebrate pheromones
Q37176333Proteomic discovery of previously unannotated, rapidly evolving seminal fluid genes in Drosophila
Q91801586Pseudo-chromosome-length genome assembly of a double haploid "Bartlett" pear (Pyrus communis L.).
Q35589167Pseudogenization of CCL14 in the Ochotonidae (pika) family
Q24609283Pseudogenization of the tooth gene enamelysin (MMP20) in the common ancestor of extant baleen whales
Q28743973Pseudogenization of the umami taste receptor gene Tas1r1 in the giant panda coincided with its dietary switch to bamboo
Q28607731Purifying Selection Maintains Dosage-Sensitive Genes during Degeneration of the Threespine Stickleback Y Chromosome
Q36904236Purifying Selection on Exonic Splice Enhancers in Intronless Genes
Q38980507Purifying and Positive Selection Influence Patterns of Gene Loss and Gene Expression in the Evolution of a Plant Sex Chromosome System
Q55340924Purifying and positive selection in the evolution of stop codons.
Q36050714Purifying selection acts on coding and non-coding sequences of paralogous genes in Arabidopsis thaliana
Q39344245Purifying selection and genetic drift shaped Pleistocene evolution of the mitochondrial genome in an endangered Australian freshwater fish
Q42558909Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms
Q51043300Purifying selection on leptin genes in teleosts may be due to poikilothermy.
Q30619838Putting pleiotropy and selection into context defines a new paradigm for interpreting genetic data
Q46671923Puzzling rocks and complicated clocks: how to optimize molecular dating approaches in historical phytogeography
Q35784876Pyvolve: A Flexible Python Module for Simulating Sequences along Phylogenies
Q91712351Quantifying the Error of Secondary vs. Distant Primary Calibrations in a Simulated Environment
Q54919119Quantifying the Evolutionary Conservation of Genes Encoding Multidrug Efflux Pumps in the ESKAPE Pathogens To Identify Antimicrobial Drug Targets.
Q48048326Quantifying the elevation of mitochondrial DNA evolutionary substitution rates over nuclear rates in the intertidal copepod Tigriopus californicus.
Q34636265Quantitative genetic analysis indicates natural selection on leaf phenotypes across wild tomato species (Solanum sect. Lycopersicon; Solanaceae).
Q35098720Quartet-based methods to reconstruct phylogenetic networks
Q38607601REST, a master regulator of neurogenesis, evolved under strong positive selection in humans and in non human primates.
Q40319585RNA interference against animal viruses: how morbilliviruses generate extended diversity to escape small interfering RNA control
Q34895191RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes
Q58793532RNA-seq highlights parallel and contrasting patterns in the evolution of the nuclear genome of fully mycoheterotrophic plants
Q36948696RNA-seq of Ranunculus sceleratus and Identification of Orthologous Genes among Four Ranunculus Species
Q90306251RadAA: A Command-line Tool for Identification of Radical Amino Acid Changes in Multiple Sequence Alignments
Q38369024Range instability leads to cytonuclear discordance in a morphologically cryptic ground squirrel species complex
Q40051947Rapid Evolution of Ovarian-Biased Genes in the Yellow Fever Mosquito (Aedes aegypti).
Q40074488Rapid Evolution of Primate Type 2 Immune Response Factors Linked to Asthma Susceptibility
Q31130523Rapid Evolutionary Rates and Unique Genomic Signatures Discovered in the First Reference Genome for the Southern Ocean Salp, Salpa thompsoni (Urochordata, Thaliacea)
Q46256814Rapid Gene Family Evolution of a Nematode Sperm Protein Despite Sequence Hyper-conservation
Q42363229Rapid Gene Turnover as a Significant Source of Genetic Variation in a Recently Seeded Population of a Healthcare-Associated Pathogen.
Q42198685Rapid and Recent Evolution of LTR Retrotransposons Drives Rice Genome Evolution During the Speciation of AA-Genome Oryza Species
Q28709654Rapid birth-and-death evolution of the xenobiotic metabolizing NAT gene family in vertebrates with evidence of adaptive selection
Q60933836Rapid birth-death evolution and positive selection in detoxification-type glutathione S-transferases in mammals
Q35914837Rapid coastal spread of First Americans: novel insights from South America's Southern Cone mitochondrial genomes
Q35691170Rapid divergence and diversification of mammalian duplicate gene functions
Q28661205Rapid diversification of FoxP2 in teleosts through gene duplication in the teleost-specific whole genome duplication event
Q91272193Rapid evolution and biogeographic spread in a colorectal cancer
Q33930642Rapid evolution of BRCA1 and BRCA2 in humans and other primates
Q28681874Rapid evolution of Beta-keratin genes contribute to phenotypic differences that distinguish turtles and birds from other reptiles
Q33685526Rapid evolution of PARP genes suggests a broad role for ADP-ribosylation in host-virus conflicts
Q36821551Rapid evolution of a Y-chromosome heterochromatin protein underlies sex chromosome meiotic drive
Q33750470Rapid evolution of a novel signalling mechanism by concerted duplication and divergence of a BMP ligand and its extracellular modulators
Q35757814Rapid evolution of chemosensory receptor genes in a pair of sibling species of orchid bees (Apidae: Euglossini).
Q33919811Rapid evolution of coral proteins responsible for interaction with the environment
Q21563526Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates
Q33836718Rapid evolution of piRNA pathway in the teleost fish: implication for an adaptation to transposon diversity
Q43090998Rapid evolution of plethodontid modulating factor, a hypervariable salamander courtship pheromone, is driven by positive selection
Q92284524Rapid evolution of protein diversity by de novo origination in Oryza
Q36423937Rapid evolution of the sequences and gene repertoires of secreted proteins in bacteria
Q35804230Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes
Q59354788Rapid evolutionary dynamics of pepper mild mottle virus
Q34426968Rapid intraspecific evolution of miRNA and siRNA genes in the mosquito Aedes aegypti
Q33881244Rapid likelihood analysis on large phylogenies using partial sampling of substitution histories
Q35699467Rapid molecular evolution across amniotes of the IIS/TOR network.
Q38764570Rapid radiations of both kiwifruit hybrid lineages and their parents shed light on a two-layer mode of species diversification
Q52684429Rapid regulatory evolution of a nonrecombining autosome linked to divergent behavioral phenotypes.
Q42215606Rapid replacement of human respiratory syncytial virus A with the ON1 genotype having 72 nucleotide duplication in G gene
Q34137652Rapid sequencing of the bamboo mitochondrial genome using Illumina technology and parallel episodic evolution of organelle genomes in grasses
Q41834168Rapid speciation with gene flow following the formation of Mt. Etna.
Q42322073Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
Q46748699Rapid turnover of antimicrobial-type cysteine-rich protein genes in closely related Oryza genomes
Q64242412Rapid turnover of life-cycle-related genes in the brown algae
Q35725669Rapidly Evolving Genes Are Key Players in Host Specialization and Virulence of the Fungal Wheat Pathogen Zymoseptoria tritici (Mycosphaerella graminicola).
Q59136818Rapidly evolving changes and gene loss associated with host switching in Corynebacterium pseudotuberculosis
Q43069191Rapidly evolving mitochondrial genome and directional selection in mitochondrial genes in the parasitic wasp nasonia (hymenoptera: pteromalidae).
Q92977414Raptor genomes reveal evolutionary signatures of predatory and nocturnal lifestyles
Q118110141Rate accelerations in plastid and mitochondrial genomes of Cyperaceae occur in the same clades
Q42054316Rate and breadth of protein evolution are only weakly correlated
Q28743308Rate variation and estimation of divergence times using strict and relaxed clocks
Q36170452Rates and patterns of molecular evolution in freshwater versus terrestrial insects
Q40967620Rates and relations of mitochondrial genome evolution across the Echinoidea, with special focus on the superfamily Odontophora
Q34132422Rates of evolution in stress-related genes are associated with habitat preference in two Cardamine lineages
Q38482790Rates of evolution of hominoid seminal proteins are correlated with function and expression, rather than mating system
Q52764803Rates of genomic divergence in humans, chimpanzees and their lice.
Q30416529Rates of molecular evolution vary in vertebrates for insulin-like growth factor-1 (IGF-1), a pleiotropic locus that regulates life history traits
Q28597828Re-Evaluation of Phylogenetic Relationships among Species of the Mangrove Genus Avicennia from Indo-West Pacific Based on Multilocus Analyses
Q89793351Reappraising plastid markers of the red algae for phylogenetic community ecology in the genomic era
Q90595280Recalibration of the insect evolutionary time scale using Monte San Giorgio fossils suggests survival of key lineages through the End-Permian Extinction
Q28552649Recent Duplication and Functional Divergence in Parasitic Nematode Levamisole-Sensitive Acetylcholine Receptors
Q37574877Recent Positive Selection in Genes of the Mammalian Epidermal Differentiation Complex Locus.
Q30427500Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene.
Q34495041Recent and recurrent selective sweeps of the antiviral RNAi gene Argonaute-2 in three species of Drosophila
Q37202557Recent evolution of the salivary mucin MUC7.
Q37109673Recent host-shifts in ranaviruses: signatures of positive selection in the viral genome
Q21134973Recent loss of vitamin C biosynthesis ability in bats
Q93000662Recent mixing of Vibrio parahaemolyticus populations
Q64967854Recent polyploidization events in three Saccharum founding species.
Q38814601Recent sex chromosome divergence despite ancient dioecy in the willow Salix viminalis
Q34056397Recent, independent and anthropogenic origins of Trypanosoma cruzi hybrids
Q28595806Reciprocal genomic evolution in the ant-fungus agricultural symbiosis
Q47613483Reciprocally Retained Genes in the Angiosperm Lineage Show the Hallmarks of Dosage Balance Sensitivity.
Q52601702Recognition of the polycistronic nature of human genes is critical to understanding the genotype-phenotype relationship.
Q33525265Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia
Q35851622Recombination and selection in the major histocompatibility complex of the endangered forest musk deer (Moschus berezovskii).
Q91045432Recombination contributes to population diversification in the polyploid intestinal symbiont Epulopiscium sp. type B
Q34263156Recombination drives vertebrate genome contraction
Q35938811Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages
Q101051253Recombination shapes African swine fever virus serotype-specific locus evolution
Q33881169Recombination yet inefficient selection along the Drosophila melanogaster subgroup's fourth chromosome
Q34196464Recombination, diversity and allele sharing of infectivity proteins between Bartonella species from rodents.
Q39463546Reconciling the evolutionary origin of bread wheat (Triticum aestivum).
Q58751636Reconfiguration of the plastid genome in Lamprocapnos spectabilis: IR boundary shifting, inversion, and intraspecific variation
Q34493140Reconstructed Ancestral Enzymes Impose a Fitness Cost upon Modern Bacteria Despite Exhibiting Favourable Biochemical Properties.
Q48095755Reconstructed ancestral enzymes reveal that negative selection drove the evolution of substrate specificity in ADP-dependent kinases
Q28744080Reconstructed ancestral sequences improve pathogen identification using resequencing DNA microarrays
Q57178416Reconstructed evolution of insulin receptors in insects reveals duplications in early insects and cockroaches
Q39182229Reconstructing Ancient Proteins to Understand the Causes of Structure and Function
Q30666548Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data.
Q89742751Reconstructing the evolutionary history of nitrogenases: Evidence for ancestral molybdenum-cofactor utilization
Q28690633Reconstructing the phylogenetic history of long-term effective population size and life-history traits using patterns of amino acid replacement in mitochondrial genomes of mammals and birds
Q40413653Reconstruction and Analysis of the Evolution of Modular Transcriptional Regulatory Programs Using Arboretum
Q28593075Reconstruction of ancestral RNA sequences under multiple structural constraints
Q21145729Reconstruction of ancestral metabolic enzymes reveals molecular mechanisms underlying evolutionary innovation through gene duplication
Q90393607Reconstruction of the Evolutionary Histories of UGT Gene Superfamily in Legumes Clarifies the Functional Divergence of Duplicates in Specialized Metabolism
Q45347312Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates
Q34231142Recruitment and diversification of an ecdysozoan family of neuropeptide hormones for black widow spider venom expression
Q46334220Recruitment of histone modifications to assist mRNA dosage maintenance after degeneration of cytosine DNA methylation during animal evolution
Q89165853Recurrent Amplification of the Heterochromatin Protein 1 (HP1) Gene Family across Diptera
Q34494553Recurrent Domestication by Lepidoptera of Genes from Their Parasites Mediated by Bracoviruses
Q56880117Recurrent Emergence of Catalytically Inactive Ornithine Decarboxylase Homologous Forms That Likely Have Regulatory Function
Q47384791Recurrent Innovation at Genes Required for Telomere Integrity in Drosophila
Q59358404Recurrent Loss of APOBEC3H Activity during Primate Evolution
Q91595880Recurrent Losses and Rapid Evolution of the Condensin II Complex in Insects
Q52710532Recurrent adaptation in RNA interference genes across the Drosophila phylogeny.
Q37712472Recurrent and recent selective sweeps in the piRNA pathway.
Q89747777Recurrent gene duplication in the angiosperm tribe Delphinieae (Ranunculaceae) inferred from intracellular gene transfer events and heteroplasmic mutations in the plastid matK gene
Q40494874Recurrent horizontal transfer of arsenite methyltransferase genes facilitated adaptation of life to arsenic.
Q57456954Recurrent loss of HMGCS2 shows that ketogenesis is not essential for the evolution of large mammalian brains
Q33883132Recurrent tandem gene duplication gave rise to functionally divergent genes in Drosophila
Q37738579Red Algal Mitochondrial Genomes Are More Complete than Previously Reported
Q41594583Red algae lose key mitochondrial genes in response to becoming parasitic
Q46838890Reductive genome evolution at both ends of the bacterial population size spectrum.
Q35620910Reevaluating Emx gene phylogeny: homopolymeric amino acid tracts as a potential factor obscuring orthology signals in cyclostome genes.
Q35682566Reference genome of wild goat (capra aegagrus) and sequencing of goat breeds provide insight into genic basis of goat domestication
Q100750279Reference transcriptomes and comparative analyses of six species in the threatened rosewood genus Dalbergia
Q28831146Refuting the hypothesis that the acquisition of germ plasm accelerates animal evolution
Q28743873Regional selection acting on the OFD1 gene family
Q39160574Regional selection of the brain size regulating gene CASC5 provides new insight into human brain evolution
Q43544286Regulation of transcription of nucleotide-binding leucine-rich repeat-encoding genes SNC1 and RPP4 via H3K4 trimethylation
Q34456053Regulatory network structure as a dominant determinant of transcription factor evolutionary rate
Q41946523RelTime Rates Collapse to a Strict Clock When Estimating the Timeline of Animal Diversification
Q42996980Relation of pretreatment sequence diversity in NS5A region of HCV genotype 1 with immune response between pegylated-INF/ribavirin therapy outcomes.
Q64107619Relative Mutation Rates in Nucleomorph-Bearing Algae
Q62579846Relative abundance and molecular evolution of Lake Sinai Virus (Sinaivirus) clades
Q111630359Relative benefits of amino-acid, codon, degeneracy, DNA, and purine-pyrimidine character coding for phylogenetic analyses of exons
Q89970948Relative efficiencies of simple and complex substitution models in estimating divergence times in phylogenomics
Q47422531Relative rates of evolution among the three genetic compartments of the red alga Porphyra differ from those of green plants and do not correlate with genome architecture
Q37395190Relaxation of selective constraints on avian mitochondrial DNA following the degeneration of flight ability
Q28657416Relaxed evolution in the tyrosine aminotransferase gene tat in old world fruit bats (Chiroptera: Pteropodidae)
Q33456337Relaxed functional constraints on triplicate α-globin gene in the bank vole suggest a different evolutionary history from other rodents
Q43204365Relaxed genetic constraint is ancestral to the evolution of phenotypic plasticity.
Q35229245Relaxed selection is a precursor to the evolution of phenotypic plasticity
Q36093392Relaxed selective constraints drove functional modifications in peripheral photoreception of the cavefish P. andruzzii and provide insight into the time of cave colonization
Q28604209Relaxing the Molecular Clock to Different Degrees for Different Substitution Types
Q37167614Reliabilities of identifying positive selection by the branch-site and the site-prediction methods
Q67245360Relicts and radiations: Phylogenomics of an Australasian lizard clade with east Gondwanan origins (Gekkota: Diplodactyloidea)
Q35998560Remarkable selective constraints on exonic dinucleotide repeats
Q28748633Remarkably ancient balanced polymorphisms in a multi-locus gene network
Q93177033Repeated Evolution of Asexuality Involves Convergent Gene Expression Changes
Q38453642Repeated Whole-Genome Duplication, Karyotype Reshuffling, and Biased Retention of Stress-Responding Genes in Buckler Mustard
Q86976641Repeated functional convergent effects of NaV1.7 on acid insensitivity in hibernating mammals
Q47731698Repeated loss of an anciently horizontally transferred gene cluster in Botrytis
Q90149379Repeated species radiations in the recent evolution of the key marine phytoplankton lineage Gephyrocapsa
Q34299616Repertoire, genealogy and genomic organization of cruzipain and homologous genes in Trypanosoma cruzi, T. cruzi-like and other trypanosome species.
Q36320957Replacing and additive horizontal gene transfer in Streptococcus
Q94563016Reply to: Evaluating two different models of peanut's origin
Q110951190Reproductive isolation among lineages of Silene nutans (Caryophyllaceae): A potential involvement of plastid-nuclear incompatibilities
Q33797370Reproductive protein evolution in two cryptic species of marine chordate
Q34558176Reptiles and mammals have differentially retained long conserved noncoding sequences from the amniote ancestor.
Q34482539Resequencing microarray technology for genotyping human papillomavirus in cervical smears
Q36049555Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene
Q92071457Residual Variation Intolerance Score Detects Loci Under Selection in Neuroinvasive Listeria monocytogenes
Q30425684Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes
Q31146473Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae).
Q93014316Resolving the genetic paradox of invasions: Preadapted genomes and postintroduction hybridization of bigheaded carps in the Mississippi River Basin
Q37431748Response of gastric epithelial progenitors to Helicobacter pylori Isolates obtained from Swedish patients with chronic atrophic gastritis
Q58111068Response to Comment on "Human-Specific Gain of Function in a Developmental Enhancer"
Q58548299Resurrected Protein Interaction Networks Reveal the Innovation Potential of Ancient Whole Genome Duplication
Q36185915Resurrecting ancestral structural dynamics of an antiviral immune receptor: adaptive binding pocket reorganization repeatedly shifts RNA preference.
Q33802825Resurrecting the Dead (Molecules)
Q37228148Resurrection of an Urbilaterian U1A/U2B″/SNF protein
Q88308200Retained duplications and deletions of CYP2C genes among primates
Q56558305Retention and losses of ultraviolet-sensitive visual pigments in bats
Q36655520Retention, Molecular Evolution, and Expression Divergence of the Auxin/Indole Acetic Acid and Auxin Response Factor Gene Families in Brassica Rapa Shed Light on Their Evolution Patterns in Plants
Q41717620Rethinking the Origin of Primates by Reconstructing Their Diel Activity Patterns Using Genetics and Morphology
Q30049405Rethinking the evolution of extant sub-Saharan African suids (Suidae, Artiodactyla)
Q101632741Reticulate evolution in nuclear Middle America causes discordance in the phylogeny of palm‐pitvipers (Viperidae: Bothriechis )
Q44223561Reticulate evolution of the rye genome
Q28595559Retinal transcriptome sequencing sheds light on the adaptation to nocturnal and diurnal lifestyles in raptors
Q37242002Retrotransposon Proliferation Coincident with the Evolution of Dioecy in Asparagus.
Q28650284Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials
Q28654491Retroviral envelope syncytin capture in an ancestrally diverged mammalian clade for placentation in the primitive Afrotherian tenrecs
Q91880128Return to the Sea, Get Huge, Beat Cancer: An Analysis of Cetacean Genomes Including an Assembly for the Humpback Whale (Megaptera novaeangliae)
Q36033086RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
Q28681093Revealing less derived nature of cartilaginous fish genomes with their evolutionary time scale inferred with nuclear genes
Q36221435Review: Toward an integrated evolutionary understanding of the mammalian placenta
Q51186853Revised time scales of RNA virus evolution based on spatial information.
Q41961931Revisiting de Beer's textbook example of heterochrony and jaw elongation in fish: calmodulin expression reflects heterochronic growth, and underlies morphological innovation in the jaws of belonoid fishes
Q28596338Revisiting the Plastid Phylogenomics of Pinaceae with Two Complete Plastomes of Pseudolarix and Tsuga
Q36262448Revisiting the reference genomes of human pathogenic Cryptosporidium species: reannotation of C. parvum Iowa and a new C. hominis reference
Q42682609Rhodopsin gene copies in Japanese eel originated in a teleost-specific genome duplication
Q28749590Rhodopsin molecular evolution in mammals inhabiting low light environments
Q90358183Rhopalocnemis phalloides has one of the most reduced and mutated plastid genomes known
Q47262537Ribosomal RNA gene diversity, effective population size, and evolutionary longevity in asexual glomeromycota
Q34075031Rigorous and thorough bioinformatic analyses of olfactory receptor promoters confirm enrichment of O/E and homeodomain binding sites but reveal no new common motifs
Q38294224Robust enzyme design: bioinformatic tools for improved protein stability
Q35744639Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix
Q29041177Robustness of Ancestral Sequence Reconstruction to Phylogenetic Uncertainty
Q35330316Rock, paper, scissors: harnessing complementarity in ortholog detection methods improves comparative genomic inference
Q28708944Rod monochromacy and the coevolution of cetacean retinal opsins
Q37735455Role of Ectopic Gene Conversion in the Evolution of a Candida krusei Pleiotropic Drug Resistance Transporter Family.
Q36088168Role of mRNA structure in the control of protein folding
Q83225187Roles of C/EBP class bZip proteins in the growth and cell competition of ('Minute') mutants in
Q30415265Root parasitic plant Orobanche aegyptiaca and shoot parasitic plant Cuscuta australis obtained Brassicaceae-specific strictosidine synthase-like genes by horizontal gene transfer
Q35789043Roundup 2.0: enabling comparative genomics for over 1800 genomes
Q38850091Rubisco Catalytic Properties and Temperature Response in Crops.
Q34534931Rubisco evolution in C₄ eudicots: an analysis of Amaranthaceae sensu lato
Q36307697Ruminant-specific multiple duplication events of PRDM9 before speciation
Q27334859SCaMC-1Like a member of the mitochondrial carrier (MC) family preferentially expressed in testis and localized in mitochondria and chromatoid body
Q24297491SERPINA2 is a novel gene with a divergent function from SERPINA1
Q37231272SEX-DETector: A Probabilistic Approach to Study Sex Chromosomes in Non-Model Organisms.
Q45933286SMAL: A Resource of Spontaneous Mutation Accumulation Lines.
Q34263872SMIM1 underlies the Vel blood group and influences red blood cell traits
Q41140200SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
Q91708825SMRT sequencing of the Oryza rufipogon genome reveals the genomic basis of rice adaptation
Q99564888SMRT- and Illumina-based RNA-seq analyses unveil the ginsinoside biosynthesis and transcriptomic complexity in Panax notoginseng
Q34607738SWAMP: Sliding Window Alignment Masker for PAML.
Q35027991SWS2 visual pigment evolution as a test of historically contingent patterns of plumage color evolution in warblers
Q46758668Saccharomyces eubayanus and Saccharomyces uvarum associated with the fermentation of Araucaria araucana seeds in Patagonia
Q34499867Salt stress phenotypes in Listeria monocytogenes vary by genetic lineage and temperature
Q88785652Scallop genome provides insights into evolution of bilaterian karyotype and development
Q92641666Scotopic rod vision in tetrapods arose from multiple early adaptive shifts in the rate of retinal release
Q42034775Screening for candidate genes involved in the production of mouse subventricular zone proliferative cells and an estimation of their changes in evolutionary pressure during primate evolution
Q36709194Sea star populations diverge by positive selection at a sperm-egg compatibility locus
Q39259914SearchDOGS bacteria, software that provides automated identification of potentially missed genes in annotated bacterial genomes
Q28661400Searching for efficient Markov chain Monte Carlo proposal kernels
Q31024279Searching for evidence of selection in avian DNA barcodes
Q64261158Secondary contact between diverged host lineages entails ecological speciation in a European hantavirus
Q34729667Secondary evolution of a self-incompatibility locus in the Brassicaceae genus Leavenworthia.
Q39070373Secreted Proteins Defy the Expression Level-Evolutionary Rate Anticorrelation
Q33504548Segregating YKU80 and TLC1 alleles underlying natural variation in telomere properties in wild yeast
Q51588552Segregation distortion in chicken and the evolutionary consequences of female meiotic drive in birds.
Q28657896Selection and demographic history shape the molecular evolution of the gamete compatibility protein bindin in Pisaster sea stars
Q45834790Selection at the MHC class IIB locus across guppy (Poecilia reticulata) populations.
Q97519304Selection for Reducing Energy Cost of Protein Production Drives the GC Content and Amino Acid Composition Bias in Gene Transfer Agents
Q35185563Selection for translation efficiency on synonymous polymorphisms in recent human evolution
Q46906791Selection from parasites favours immunogenetic diversity but not divergence among locally adapted host populations
Q34023328Selection in coastal Synechococcus (cyanobacteria) populations evaluated from environmental metagenomes
Q42022379Selection maintains signaling function of a highly diverged intrinsically disordered region
Q28552359Selection on Network Dynamics Drives Differential Rates of Protein Domain Evolution
Q34350873Selection on a variant associated with improved viral clearance drives local, adaptive pseudogenization of interferon lambda 4 (IFNL4)
Q43627161Selection on an antimicrobial peptide defensin in ants
Q28602407Selection on different genes with equivalent functions: the convergence story told by Hox genes along the evolution of aquatic mammalian lineages
Q42367814Selection on start codons in prokaryotes and potential compensatory nucleotide substitutions
Q33612400Selection on synonymous codons in mammalian rhodopsins: a possible role in optimizing translational processes
Q37058680Selection on the Drosophila seminal fluid protein Acp62F
Q48047249Selection on the Major Color Gene Melanocortin-1-Receptor Shaped the Evolution of the Melanocortin System Genes
Q34534034Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution.
Q64264533Selection shapes turnover and magnitude of sex-biased expression in Drosophila gonads
Q91785248Selection, drift, and introgression shape MHC polymorphism in lizards
Q34480232Selective Advantages of a Parasexual Cycle for the Yeast Candida albicans
Q60932037Selective Pressures on Human Cancer Genes along the Evolution of Mammals
Q55280969Selective constraint acting on TLR2 and TLR4 genes of Japanese Rana frogs.
Q36310783Selective constraint on human pre-mRNA splicing by protein structural properties
Q28710408Selective constraints determine the time dependency of molecular rates for human nuclear genomes
Q64974859Selective constraints in cold-region wild boars may defuse the effects of small effective population size on molecular evolution of mitogenomes.
Q52713176Selective constraints in conserved folded RNAs of drosophilid and hominid genomes.
Q35902137Selective constraints on protamine 2 in primates and rodents
Q92883303Selective deployment of transcription factor paralogs with submaximal strength facilitates gene regulation in the immune system
Q41690846Selective forces acting during multi-domain protein evolution: the case of multi-domain globins
Q38884178Selective modes determine evolutionary rates, gene compactness and expression patterns in Brassica
Q37661803Selectome update: quality control and computational improvements to a database of positive selection
Q37202740Selectome: a database of positive selection
Q33785023Self-incompatibility in Brassicaceae: identification and characterization of SRK-like sequences linked to the S-locus in the tribe Biscutelleae
Q43733981Self-incompatibilty in gamete recognition: single self-recognizing determinants and multiple, non-self-recognizing ones function in the same individual
Q99418000Senescence and entrenchment in evolution of amino acid sites
Q30617373Sensory biology. Evolution of sweet taste perception in hummingbirds by transformation of the ancestral umami receptor.
Q21284034Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)
Q91688176SeqTailor: a user-friendly webserver for the extraction of DNA or protein sequences from next-generation sequencing data
Q55339367Sequence Variation of Rare Outer Membrane Protein β-Barrel Domains in Clinical Strains Provides Insights into the Evolution of Treponema pallidum subsp. pallidum, the Syphilis Spirochete.
Q34833405Sequence analyses of the distal-less homeobox gene family in East African cichlid fishes reveal signatures of positive selection
Q54311071Sequence analysis of the Ras-MAPK pathway genes SOS1, EGFR & GRB2 in silver foxes (Vulpes vulpes): candidate genes for hereditary hyperplastic gingivitis.
Q40650676Sequence analysis on the information of folding initiation segments in ferredoxin-like fold proteins
Q21561002Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis
Q36393111Sequence and gene expression evolution of paralogous genes in willows
Q28728623Sequence comparisons of odorant receptors among tortricid moths reveal different rates of molecular evolution among family members
Q34588927Sequence divergence and diversity suggests ongoing functional diversification of vertebrate NAD metabolism.
Q50495674Sequence divergence in the 3'-untranslated region has an effect on the subfunctionalization of duplicate genes.
Q37128674Sequence diversity in coding regions of candidate genes in the glycoalkaloid biosynthetic pathway of wild potato species
Q37430115Sequence diversity of Pan troglodytes subspecies and the impact of WFDC6 selective constraints in reproductive immunity
Q36867862Sequence of the Gonium pectorale Mating Locus Reveals a Complex and Dynamic History of Changes in Volvocine Algal Mating Haplotypes
Q33495203Sequence polymorphism and evolution of three cetacean MHC genes
Q33610222Sequence polymorphism and geographical variation at a positively selected MHC-DRB gene in the finless porpoise (Neophocaena phocaenoides): implication for recent differentiation of the Yangtze finless porpoise?
Q42620212Sequence shortening in the rodent ancestor
Q37147834Sequence signatures of a recent chromosomal rearrangement in Drosophila mojavensis.
Q34116384Sequence space and the ongoing expansion of the protein universe
Q35211667Sequence, structural and expression divergence of duplicate genes in the bovine genome
Q42659230Sequence-Based Analysis of Thermal Adaptation and Protein Energy Landscapes in an Invasive Blue Mussel (Mytilus galloprovincialis).
Q34221362Sequencing and analysis of plastid genome in mycoheterotrophic orchid Neottia nidus-avis.
Q30428308Sequencing and annotation of the Ophiostoma ulmi genome
Q34634109Sequencing and comparative analysis of the straw mushroom (Volvariella volvacea) genome
Q30505291Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes.
Q92281615Sequencing of a Wild Apple (Malus baccata) Genome Unravels the Differences Between Cultivated and Wild Apple Species Regarding Disease Resistance and Cold Tolerance
Q48198330Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
Q34445773Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC.
Q28710006Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms
Q28658737Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships
Q34661903Sequential adaptive introgression of the mitochondrial genome in Drosophila yakuba and Drosophila santomea
Q27939634Sequential duplications of an ancient member of the DnaJ-family expanded the functional chaperone network in the eukaryotic cytosol.
Q92942256Serotype-specific evolutionary patterns of antimicrobial-resistant Salmonella enterica
Q35119987Sex chromosome turnover contributes to genomic divergence between incipient stickleback species.
Q34036208Sex in the PAC: a hidden affair in dark septate endophytes?
Q90663070Sex-biased gene expression is repeatedly masculinized in asexual females
Q36447142Sex-biased transcriptome evolution in Drosophila
Q99724533Sex-specific selection drives the evolution of alternative splicing in birds
Q46660726Sexual Selection of Protamine 1 in Mammals
Q46766328Sexual dimorphism and the evolution of sex-biased gene expression in the brown alga ectocarpus.
Q28651162Sexual selection and the adaptive evolution of PKDREJ protein in primates and rodents
Q35378408Sexual selection drives evolution and rapid turnover of male gene expression
Q51663669Sexual selection drives weak positive selection in protamine genes and high promoter divergence, enhancing sperm competitiveness.
Q34117385Sexual selection halts the relaxation of protamine 2 among rodents
Q47239638Sexual size dimorphism predicts rates of sequence evolution of SPerm Adhesion Molecule 1 (SPAM1, also PH-20) in monkeys, but not in hominoids (apes including humans).
Q41210866Shared elements of host-targeting pathways among apicomplexan parasites of differing lifestyles
Q38612011Shared evolutionary origin of MHC polymorphism in sympatric lemurs
Q33860122Shared origins of a key enzyme during the evolution of C4 and CAM metabolism
Q35641495Shared selective pressure and local genomic landscape lead to repeatable patterns of genomic divergence in sunflowers
Q57295515Shark genomes provide insights into elasmobranch evolution and the origin of vertebrates
Q38653515Shift in the isoelectric-point of milk proteins as a consequence of adaptive divergence between the milks of mammalian species
Q43678845Shifting habitats, morphology, and selective pressures: developmental polyphenism in an adaptive radiation of Hawaiian spiders
Q52642207Shifts in the evolutionary rate and intensity of purifying selection between two Brassica genomes revealed by analyses of orthologous transposons and relics of a whole genome triplication.
Q28477359Shotgun sequencing analysis of Trypanosoma cruzi I Sylvio X10/1 and comparison with T. cruzi VI CL Brener
Q56786843Sigmodontine rodents diversified in South America prior to the complete rise of the Panamanian Isthmus
Q30481642Signal processing for metagenomics: extracting information from the soup
Q36281793Signaling Lymphocytic Activation Molecule Family Receptor Homologs in New World Monkey Cytomegaloviruses
Q38852988Signals of selection in conditionally expressed genes in the diversification of three horned beetle species.
Q47297172Signature of selection on the rhodopsin gene in the marine radiation of American seven-spined gobies (Gobiidae, Gobiosomatini).
Q38434282Signatures of co-evolutionary host-pathogen interactions in the genome of the entomopathogenic nematode Steinernema carpocapsae.
Q92630997Signatures of differential selection in chloroplast genome between japonica and indica
Q46610898Signatures of functional constraint at Fgfr1a Genes in schizothoracine fishes (Pisces: Cypriniformes): The dermal skeleton variation adapted to high-altitude environments
Q49506198Signatures of historical selection on MHC reveal different selection patterns in the moor frog (Rana arvalis).
Q54956145Signatures of host specialization and a recent transposable element burst in the dynamic one-speed genome of the fungal barley powdery mildew pathogen.
Q37182685Signatures of natural selection are not uniform across genes of innate immune system, but purifying selection is the dominant signature
Q35554357Signatures of natural selection at the FTO (fat mass and obesity associated) locus in human populations
Q45738443Signatures of natural selection in a primate bitter taste receptor
Q118110146Signatures of natural selection in tree topology shape of serially sampled viral phylogenies
Q40231365Signatures of positive selection at hemopexin (PEX) domain of matrix metalloproteinase-9 (MMP-9) gene
Q45146505Signatures of positive selection in LY96 gene in vertebrates
Q34106795Signatures of positive selection in Toll-like receptor (TLR) genes in mammals
Q41984246Significance of population size on the fixation of nonsynonymous mutations in genes under varying levels of selection pressure
Q38909581Significance of positive selection and gene duplication in adaptive evolution: in memory of Austin L. Hughes
Q39909346Significant selective constraint at 4-fold degenerate sites in the avian genome and its consequence for detection of positive selection
Q34472536Signs of neutralization in a redundant gene involved in homologous recombination in Wolbachia endosymbionts.
Q30364029Similar structures to the E-to-H helix unit in the globin-like fold are found in other helical folds.
Q38889795Simulation of genome-wide evolution under heterogeneous substitution models and complex multispecies coalescent histories
Q37480771Simulation of genomes: a review.
Q67213176Simultaneous Bayesian inference of phylogeny and molecular coevolution
Q88792554Simultaneous radiation of bird and mammal lice following the K-Pg boundary
Q31133433Single-cell SNP analyses and interpretations based on RNA-Seq data for colon cancer research
Q33741813Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
Q38635477Single-molecule sequencing and Hi-C-based proximity-guided assembly of amaranth (Amaranthus hypochondriacus) chromosomes provide insights into genome evolution
Q52606998Single-molecule, full-length transcript sequencing provides insight into the extreme metabolism of the ruby-throated hummingbird Archilochus colubris.
Q93116347Site-specific cleavage of bacterial MucD by secreted proteases mediates antibacterial resistance in Arabidopsis
Q97653112Six reference-quality genomes reveal evolution of bat adaptations
Q33881162Slip into something more functional: selection maintains ancient frameshifts in homopolymeric sequences
Q28607517Slow and Fast Evolving Endosymbiont Lineages: Positive Correlation between the Rates of Synonymous and Non-Synonymous Substitution
Q28730552Slow but not low: genomic comparisons reveal slower evolutionary rate and higher dN/dS in conifers compared to angiosperms
Q35084983Slow co-evolution of the MAGO and Y14 protein families is required for the maintenance of their obligate heterodimerization mode
Q47560472Slow evolution of sex-biased genes in the reproductive tissue of the dioecious plant Salix viminalis.
Q96576529Slow evolution under purifying selection in the gamete recognition protein bindin of the sea urchin Diadema
Q35091081Slow protein evolutionary rates are dictated by surface-core association
Q42610265Small homologous blocks in phytophthora genomes do not point to an ancient whole-genome duplication.
Q36598356Small open reading frames associated with morphogenesis are hidden in plant genomes
Q40747897Small ruminant lentiviral Vif proteins commonly utilize cyclophilin A, an evolutionarily and structurally conserved protein, to degrade ovine and caprine APOBEC3 proteins
Q36041016Small-scale gene duplications played a major role in the recent evolution of wheat chromosome 3B
Q59360167Smc5/6 Antagonism by HBx Is an Evolutionarily Conserved Function of Hepatitis B Virus Infection in Mammals
Q39530493Smoothed Bootstrap Aggregation for Assessing Selection Pressure at Amino Acid Sites.
Q35757966Snake venoms are integrated systems, but abundant venom proteins evolve more rapidly
Q48216692Solution structure of sperm lysin yields novel insights into molecular dynamics of rapid protein evolution
Q42352172Solving the master equation for Indels
Q58914925Some problems in proving the existence of the universal common ancestor of life on Earth
Q47211008Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host
Q33611959Soybean (Glycine max) expansin gene superfamily origins: segmental and tandem duplication events followed by divergent selection among subfamilies
Q36174622Spatial pattern of genetic diversity and selection in the MHC class II DRB of three Neotropical bat species
Q37412266Spatial patterns of immunogenetic and neutral variation underscore the conservation value of small, isolated American badger populations
Q33862036Spatial separation of the cyanogenic β-glucosidase ZfBGD2 and cyanogenic glucosides in the haemolymph of Zygaena larvae facilitates cyanide release
Q35085616Spatial, temporal and genetic dynamics of highly pathogenic avian influenza A (H5N1) virus in China
Q35192073Spatially variable coevolution between a haemosporidian parasite and the MHC of a widely distributed passerine
Q33582618Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza
Q31143360Spatio-temporal variation in parasite communities maintains diversity at the major histocompatibility complex class IIβ in the endangered Rio Grande silvery minnow
Q34785251Spatiotemporal Phylogenetic Analysis and Molecular Characterisation of Infectious Bursal Disease Viruses Based on the VP2 Hyper-Variable Region.
Q34573661Spatiotemporal reconstruction of the Aquilegia rapid radiation through next-generation sequencing of rapidly evolving cpDNA regions.
Q46513980Specialization of a polyphenism switch gene following serial duplications in Pristionchus nematodes
Q33521144Speciation dynamics in the SE Asian tropics: Putting a time perspective on the phylogeny and biogeography of Sundaland tree squirrels, Sundasciurus
Q46252762Speciation generates mosaic genomes in kangaroos
Q46262184Speciation over the edge: gene flow among non-human primate species across a formidable biogeographic barrier
Q28652646Speciation with gene flow in equids despite extensive chromosomal plasticity
Q93150330Speciation with gene flow via cycles of isolation and migration: insights from multiple mangrove taxa
Q34979393Species and population level molecular profiling reveals cryptic recombination and emergent asymmetry in the dimorphic mating locus of C. reinhardtii.
Q91031656Species delimitation and interspecific relationships of the endangered herb genus Notopterygium inferred from multilocus variations
Q57805544Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations
Q37277865Species specific exome probes reveal new insights in positively selected genes in nonhuman primates
Q58795407Species-Specific Deamidation of cGAS by Herpes Simplex Virus UL37 Protein Facilitates Viral Replication
Q33408799Species-specific activity of HIV-1 Vpu and positive selection of tetherin transmembrane domain variants
Q36602768Species-specific chitin-binding module 18 expansion in the amphibian pathogen Batrachochytrium dendrobatidis.
Q35574913Species-specific duplications driving the recent expansion of NBS-LRR genes in five Rosaceae species.
Q36272827Species-specific duplications of NBS-encoding genes in Chinese chestnut (Castanea mollissima).
Q42655976Species-specific evolution of class I MHC genes in iguanas (order: Squamata; subfamily: Iguaninae).
Q46248557Species-specific genes under selection characterize the co-evolution of slavemaker and host lifestyles
Q35154204Specific duplication and dorsoventrally asymmetric expression patterns of Cycloidea-like genes in zygomorphic species of Ranunculaceae
Q34069165Specific resistances against Pseudomonas syringae effectors AvrB and AvrRpm1 have evolved differently in common bean (Phaseolus vulgaris), soybean (Glycine max), and Arabidopsis thaliana.
Q30380508Spectral Tuning of Killer Whale (Orcinus orca) Rhodopsin: Evidence for Positive Selection and Functional Adaptation in a Cetacean Visual Pigment.
Q28603796Spectral shifts of mammalian ultraviolet-sensitive pigments (short wavelength-sensitive opsin 1) are associated with eye length and photic niche evolution
Q45962806Sperm competition shapes gene expression and sequence evolution in the ocellated wrasse.
Q33883088Sperm proteomics reveals intensified selection on mouse sperm membrane and acrosome genes
Q28645675Spider Transcriptomes Identify Ancient Large-Scale Gene Duplication Event Potentially Important in Silk Gland Evolution
Q22122091Spider genomes provide insight into composition and evolution of venom and silk
Q39227431Spontaneous Loss of Virulence in Natural Populations of Listeria monocytogenes
Q41169795Spontaneous dominant mutations in chlamydomonas highlight ongoing evolution by gene diversification
Q46400626Spontaneous mutations of a model heterotrophic marine bacterium
Q34336484Squeezers and leaf-cutters: differential diversification and degeneration of the venom system in toxicoferan reptiles.
Q37587718Stability-activity tradeoffs constrain the adaptive evolution of RubisCO.
Q89518444Standardized phylogenetic and molecular evolutionary analysis applied to species across the microbial tree of life
Q38826456StarBEAST2 brings faster species tree inference and accurate estimates of substitution rates
Q92761266Starless bias and parameter-estimation bias in the likelihood-based phylogenetic method
Q33613732State aggregation for fast likelihood computations in molecular evolution
Q43437596Statistical comparison of nucleotide, amino acid, and codon substitution models for evolutionary analysis of protein-coding sequences
Q36935364Statistical evaluation of the Rodin-Ohno hypothesis: sense/antisense coding of ancestral class I and II aminoacyl-tRNA synthetases
Q30967881Statistical tests for natural selection on regulatory regions based on the strength of transcription factor binding sites
Q34804470Stearoyl-acyl carrier protein desaturases are associated with floral isolation in sexually deceptive orchids
Q89947701Stem rust resistance in wheat is suppressed by a subunit of the mediator complex
Q35617071Step-wise and lineage-specific diversification of plant RNA polymerase genes and origin of the largest plant-specific subunits
Q42765110Stepwise evolution of essential centromere function in a Drosophila neogene
Q90970868Stout camphor tree genome fills gaps in understanding of flowering plant genome evolution
Q42675429Strategies for Partitioning Clock Models in Phylogenomic Dating: Application to the Angiosperm Evolutionary Timescale.
Q90188936Strong Purifying Selection Is Associated with Genome Streamlining in Epipelagic Marinimicrobia
Q35110791Strong genome-wide selection early in the evolution of Prochlorococcus resulted in a reduced genome through the loss of a large number of small effect genes
Q24810381Strong purifying selection at synonymous sites in D. melanogaster
Q42430250Strong purifying selection in endogenous retroviruses in the saltwater crocodile (Crocodylus porosus) in the Northern Territory of Australia.
Q46254809Stronger selective constraint on downstream genes in the oxidative phosphorylation pathway of cetaceans
Q89949253Structural Evolution of the Glacier Ice Worm Fo ATP Synthase Complex
Q28540150Structural analysis of viral infectivity factor of HIV type 1 and its interaction with A3G, EloC and EloB
Q90372211Structural and evolutionary analyses of the Plasmodium falciparum chloroquine resistance transporter
Q34724017Structural and functional annotation of the porcine immunome
Q30352023Structural and functional evolution of positively selected sites in pine glutathione S-transferase enzyme family
Q33915158Structural and functional evolution of the trace amine-associated receptors TAAR3, TAAR4 and TAAR5 in primates
Q98881813Structural and functional impacts of E5 genetic variants of human papillomavirus type 31
Q45851739Structural and molecular diversification of the Anguimorpha lizard mandibular venom gland system in the arboreal species Abronia graminea
Q34472565Structural divergence in vertebrate phylogeny of a duplicated prototype galectin
Q37457811Structural model of rho1 GABAC receptor based on evolutionary analysis: Testing of predicted protein-protein interactions involved in receptor assembly and function
Q87464392Structural modelling and transcriptional responses highlight a clade of PpKAI2-LIKE genes as candidate receptors for strigolactones in Physcomitrella patens
Q50503940Structural, functional, and evolutionary analysis of the unusually large stilbene synthase gene family in grapevine.
Q39735767Structural-based analysis of dihydrofolate reductase evolution
Q36000695Structure and age jointly influence rates of protein evolution
Q33662642Structure and evolution of Apetala3, a sex-linked gene in Silene latifolia
Q92039838Structure and evolution of the 4-helix bundle domain of Zuotin, a J-domain protein co-chaperone of Hsp70
Q36246584Structure and evolution of the filaggrin gene repeated region in primates
Q48640636Structure and evolution of the gorilla and orangutan growth hormone loci.
Q44195244Structure and evolution of the sea star egg receptor for sperm bindin
Q27697457Structure of the terminal PCP domain of the non-ribosomal peptide synthetase in teicoplanin biosynthesis
Q35143549Structure of the yellow sac spider Cheiracanthium punctorium genes provides clues to evolution of insecticidal two-domain knottin toxins
Q82588848Structure, diversity and evolutionary patterns of expressed MHC class IIB genes in chub (Squalius cephalus), a cyprinid fish species from Europe
Q37547352Study of Gene Trafficking between Acanthamoeba and Giant Viruses Suggests an Undiscovered Family of Amoeba-Infecting Viruses
Q51246584Studying the genetic basis of speciation in high gene flow marine invertebrates.
Q34647556Sub-functionalization of duplicated genes in the evolution of nine-spined stickleback hatching enzyme.
Q33361023Sub-functionalization to ovule development following duplication of a floral organ identity gene
Q54262073SubRecon: Ancestral Reconstruction of Amino Acid Substitutions Along a Branch in a Phylogeny.
Q51436141Subcellular Relocalization and Positive Selection Play Key Roles in the Retention of Duplicate Genes of Populus Class III Peroxidase Family.
Q45096045Subfunctionalization of cyprinid hypoxia-inducible factors for roles in development and oxygen sensing
Q28822052Subgenome-specific assembly of vitamin E biosynthesis genes and expression patterns during seed development provide insight into the evolution of oat genome
Q89895461Substantial Antigenic Drift in the Hemagglutinin Protein of Swine Influenza A Viruses
Q89784354Substantially adaptive potential in polyploid cyprinid fishes: evidence from biogeographic, phylogenetic and genomic studies
Q35557717Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content
Q39404235Substitutions in the glycogenin-1 gene are associated with the evolution of endothermy in sharks and tunas
Q43028140Substrate adaptabilities of Thermotogae mannan binding proteins as a function of their evolutionary histories
Q42378718Subterranean mammals show convergent regression in ocular genes and enhancers, along with adaptation to tunneling.
Q97069877Subtyping analysis reveals new variants and accelerated evolution of Clostridioides difficile toxin B
Q28754774Successive radiations, not stasis, in the South American primate fauna
Q34097301Supermatrix and species tree methods resolve phylogenetic relationships within the big cats, Panthera (Carnivora: Felidae).
Q46387774Superoxide dismutase 1 is positively selected to minimize protein aggregation in great apes
Q51871600Suppressors of RNAi from plant viruses are subject to episodic positive selection.
Q36320846Surface layer proteins from virulent Clostridium difficile ribotypes exhibit signatures of positive selection with consequences for innate immune response
Q36919286Survey of the genome of Pogostemon cablin provides insights into its evolutionary history and sesquiterpenoid biosynthesis.
Q46527558Surveying Rubisco Diversity and Temperature Response to Improve Crop Photosynthetic Efficiency
Q36273166Susceptibility to type 2 diabetes may be modulated by haplotypes in G6PC2, a target of positive selection.
Q57139220Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis
Q93005227Symbiosis, Selection and Novelty: Freshwater Adaptation in the Unique Sponges of Lake Baikal
Q51390870Symbiotic adaptations in the fungal cultivar of leaf-cutting ants.
Q48298892Synonymous Codon Usage Controls Various Molecular Aspects.
Q35907808Synonymous and nonsynonymous distances help untangle convergent evolution and recombination
Q34248905Synonymous codon bias and functional constraint on GC3-related DNA backbone dynamics in the prokaryotic nucleoid.
Q89746610Synteny-based analyses indicate that sequence divergence is not the main source of orphan genes
Q36670775Synthesis of Experimental Molecular Biology and Evolutionary Biology: An Example from the World of Vision
Q28681338Synthetic biology of phenotypic adaptation in vertebrates: the next frontier
Q64989269Systematic Identification and Evolution Analysis of Sox Genes in Coturnix japonica Based on Comparative Genomics.
Q33972088Systematic discovery of unannotated genes in 11 yeast species using a database of orthologous genomic segments
Q55227047Systemic factors dominate mammal protein evolution.
Q92740008TDP-43 facilitates milk lipid secretion by post-transcriptional regulation of Btn1a1 and Xdh
Q92376483TRIM69 Inhibits Vesicular Stomatitis Indiana Virus
Q64899152Tandem Duplicate Genes in Maize Are Abundant and Date to Two Distinct Periods of Time.
Q61811382Tandem gene duplication and recombination at the AT3 locus in the Solanaceae, a gene essential for capsaicinoid biosynthesis in Capsicum
Q36128750Target-Driven Evolution of Scorpion Toxins
Q27314097Targeted disruption in mice of a neural stem cell-maintaining, KRAB-Zn finger-encoding gene that has rapidly evolved in the human lineage
Q46280018Taxon-restricted genes at the origin of a novel trait allowing access to a new environment
Q36005126Taxonomic revision and species delimitation of coccoid green algae currently assigned to the genus Dictyochloropsis (Trebouxiophyceae, Chlorophyta).
Q111741411Taxonomy in the phylogenomic era: species boundaries and phylogenetic relationships among North American ants of the Crematogaster scutellaris group (Formicidae: Hymenoptera)
Q28596196Tectonic collision and uplift of Wallacea triggered the global songbird radiation
Q63508240Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum
Q33762322Tempo and mode in the molecular evolution of influenza C.
Q34450599Tempo and mode of gene duplication in mammalian ribosomal protein evolution
Q34535938Tempo and mode of genome evolution in a 50,000-generation experiment
Q34746430Temporal genomic evolution of bird sex chromosomes
Q34201815Testes-specific hemoglobins in Drosophila evolved by a combination of sub- and neofunctionalization after gene duplication
Q30450703Testing for selection on synonymous sites in plant mitochondrial DNA: the role of codon bias and RNA editing
Q28732229Testing synchrony in historical biogeography: the case of new world primates and hystricognathi rodents
Q51198151Testing the molecular clock using mechanistic models of fossil preservation and molecular evolution.
Q43104289Testis-enriched heat shock protein A2 (HSPA2): Adaptive advantages of the birds with internal testes over the mammals with testicular descent
Q33929601Testis-specific glyceraldehyde-3-phosphate dehydrogenase: origin and evolution
Q51125309Tests for two trees using likelihood methods.
Q30394354The 2014 Ebola virus outbreak in West Africa highlights no evidence of rapid evolution or adaptation to humans
Q34307674The ABO blood group is a trans-species polymorphism in primates
Q35730569The Adaptive Change of HLA-DRB1 Allele Frequencies Caused by Natural Selection in a Mongolian Population That Migrated to the South of China.
Q38631170The Adaptive Evolution Database (TAED): A New Release of a Database of Phylogenetically Indexed Gene Families from Chordates.
Q28603912The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan
Q45880946The All-Rounder Sodalis: A New Bacteriome-Associated Endosymbiont of the Lygaeoid Bug Henestaris halophilus (Heteroptera: Henestarinae) and a Critical Examination of Its Evolution
Q38696318The Alzheimer's Disease-protective CD33 splice variant mediates adaptive loss of function via diversion to an intracellular pool
Q126194128The Annona montana genome reveals the development and flavor formation in mountain soursop fruit
Q33973441The Anolis lizard genome: an amniote genome without isochores
Q52609532The Antarctic sea ice alga Chlamydomonas sp. ICE-L provides insights into adaptive patterns of chloroplast evolution.
Q42690185The Apostasia genome and the evolution of orchids
Q35992393The Atlantic salmon genome provides insights into rediploidization
Q22065137The Awesome Power of Yeast Evolutionary Genetics: New Genome Sequences and Strain Resources for the Saccharomyces sensu stricto Genus
Q43738325The CYP1D subfamily of genes in mammals and other vertebrates
Q37724134The Complete Chloroplast Genome Sequences of Six Rehmannia Species
Q64890893The Complete Chloroplast Genome of Euphrasia regelii, Pseudogenization of ndh Genes and the Phylogenetic Relationships Within Orobanchaceae.
Q28606768The Complete Chloroplast Genome of Guadua angustifolia and Comparative Analyses of Neotropical-Paleotropical Bamboos
Q61449603The Complete Chloroplast Genomes of Species (Acanthaceae): Phylogenetic Relationships, Adaptive Evolution, and Screening of Molecular Markers
Q55710484The Complete Mitochondrial Genome of Glyptothorax macromaculatus Provides a Well-Resolved Molecular Phylogeny of the Chinese Sisorid Catfishes.
Q35625390The Complete Sequence of the Acacia ligulata Chloroplast Genome Reveals a Highly Divergent clpP1 Gene
Q95933791The DNA methylation landscape of giant viruses
Q36976883The Deadbeat Paternal Effect of Uncapped Sperm Telomeres on Cell Cycle Progression and Chromosome Behavior in Drosophila melanogaster
Q57113244The Diversity of Mammalian Hemoproteins and Microbial Heme Scavengers Is Shaped by an Arms Race for Iron Piracy
Q64072004The Draft Genome of an Octocoral, Dendronephthya gigantea
Q93155308The Draft Genome of the Endangered Sichuan Partridge (Arborophila rufipectus) with Evolutionary Implications
Q92306923The Evolution of Gene Duplicates in Angiosperms and the Impact of Protein-Protein Interactions and the Mechanism of Duplication
Q28831359The Evolution of Olfactory Gene Families in Drosophila and the Genomic Basis of chemical-Ecological Adaptation in Drosophila suzukii
Q35818249The Evolution of the Scavenger Receptor Cysteine-Rich Domain of the Class A Scavenger Receptors
Q41692230The Evolutionary Dynamics of the Odorant Receptor Gene Family in Corbiculate Bees
Q57091406The Evolutionary History and Genetic Diversity of Kinkajous, Potos flavus (Carnivora, Procyonidae)
Q53172994The Evolutionary Tempo of Sex Chromosome Degradation in Carica papaya.
Q38430007The FOXP2-Driven Network in Developmental Disorders and Neurodegeneration
Q92128575The First Co-Opted Endogenous Foamy Viruses and the Evolutionary History of Reptilian Foamy Viruses
Q64112413The First Transcriptome Assembly of Yenyuan Stream Salamander (Batrachuperus yenyuanensis) Provides Novel Insights into Its Molecular Evolution
Q64975748The Functional Change and Deletion of FLC Homologs Contribute to the Evolution of Rapid Flowering in Boechera stricta.
Q60305332The GC Content as a Main Factor Shaping the Amino Acid Usage During Bacterial Evolution Process
Q28296538The GMOD Drupal bioinformatic server framework
Q55332963The Gastrodia elata genome provides insights into plant adaptation to heterotrophy.
Q38358515The Genome 10K Project: a way forward
Q98735777The Genome Sequence of Alpine Megacarpaea delavayi Identifies Species-Specific Whole-Genome Duplication
Q36295359The Genome Sequence of Saccharomyces eubayanus and the Domestication of Lager-Brewing Yeasts.
Q55490093The Genome Sequences of 90 Mushrooms.
Q36429379The Genome and Methylome of a Beetle with Complex Social Behavior, Nicrophorus vespilloides (Coleoptera: Silphidae).
Q28828410The Genome and Methylome of a Subsocial Small Carpenter Bee, Ceratina calcarata
Q99615245The Genome and Transcriptome Analysis of the Vigna mungo Chloroplast
Q64912003The Genome of Drosophila innubila Reveals Lineage-Specific Patterns of Selection in Immune Genes.
Q28611283The Genome of the "Great Speciator" Provides Insights into Bird Diversification
Q90139900The Genome of the Endangered Dryas Monkey Provides New Insights into the Evolutionary History of the Vervets
Q37180351The Genome of the Self-Fertilizing Mangrove Rivulus Fish, Kryptolebias marmoratus: A Model for Studying Phenotypic Plasticity and Adaptations to Extreme Environments
Q36235773The Genome of the Trinidadian Guppy, Poecilia reticulata, and Variation in the Guanapo Population
Q38800683The Genomes of Two Bat Species with Long Constant Frequency Echolocation Calls
Q35823849The Glycine max cv. Enrei Genome for Improvement of Japanese Soybean Cultivars
Q36254755The Goddard and Saturn Genes Are Essential for Drosophila Male Fertility and May Have Arisen De Novo
Q35996462The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity.
Q34484807The Highly Reduced Plastome of Mycoheterotrophic Sciaphila (Triuridaceae) Is Colinear with Its Green Relatives and Is under Strong Purifying Selection.
Q64245182The Hsp70 Gene Family in : Genome-Wide Identification and Expression Analysis under High Ammonia Stress
Q34472616The Hsp90-dependent proteome is conserved and enriched for hub proteins with high levels of protein-protein connectivity
Q34400831The IQD gene family in soybean: structure, phylogeny, evolution and expression
Q30400233The Impact of Native State Switching on Protein Sequence Evolution.
Q90027380The Impact of Natural Selection on the Evolution and Function of Placentally Expressed Galectins
Q35941597The Impact of Selection, Gene Conversion, and Biased Sampling on the Assessment of Microbial Demography
Q28603249The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
Q36231482The Jujube Genome Provides Insights into Genome Evolution and the Domestication of Sweetness/Acidity Taste in Fruit Trees
Q36088755The Landscape of A-to-I RNA Editome Is Shaped by Both Positive and Purifying Selection
Q110951311The Last Piece of the Puzzle? Phylogenetic Position and Natural History of the Monotypic Fungus-Farming Ant Genus Paramycetophylax (Formicidae: Attini)
Q91554902The Litsea genome and the evolution of the laurel family
Q64083906The MADS-box genes expressed in the inflorescence of Orchis italica (Orchidaceae)
Q64249898The Mitochondrial Genomes of Neuropteridan Insects and Implications for the Phylogeny of Neuroptera
Q59795711The Mitochondrial Genomes of Phytophagous Scarab Beetles and Systematic Implications
Q28647488The Mitochondrial Genomes of a Myxozoan Genus Kudoa Are Extremely Divergent in Metazoa
Q64056912The Molecular Basis of Freshwater Adaptation in Prawns: Insights from Comparative Transcriptomics of Three Macrobrachium Species
Q36541123The Molecular Evolutionary Patterns of the Insulin/FOXO Signaling Pathway
Q34436022The Naked Mole Rat Genome Resource: facilitating analyses of cancer and longevity-related adaptations
Q46292668The Novel Evolution of the Sperm Whale Genome
Q30392747The OGCleaner: filtering false-positive homology clusters
Q97521927The Origin and Evolution of Plastid Genome Downsizing in Southern Hemispheric Cypresses (Cupressaceae)
Q46430980The Origin of Floral Organ Identity Quartets.
Q57059625The Origin of a New Sex Chromosome by Introgression between Two Stickleback Fishes.
Q92151114The Parallel Molecular Adaptations to the Antarctic Cold Environment in Two Psychrophilic Green Algae
Q46301065The Past Sure Is Tense: On Interpreting Phylogenetic Divergence Time Estimates
Q28603293The Phanerozoic diversification of silica-cycling testate amoebae and its possible links to changes in terrestrial ecosystems
Q37565780The Phenotypic Plasticity of Duplicated Genes in Saccharomyces cerevisiae and the Origin of Adaptations
Q99405976The Phoebe genome sheds light on the evolution of magnoliids
Q95840903The Phylodynamics of Seasonal Influenza A/H1N1pdm Virus in China Between 2009 and 2019
Q55180877The Phytophthora cactorum genome provides insights into the adaptation to host defense compounds and fungicides.
Q38499110The Population Genomics of Sunflowers and Genomic Determinants of Protein Evolution Revealed by RNAseq
Q39004698The Relevance of Genomic Signatures at Adhesion GPCR Loci in Humans
Q47314971The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis
Q27310156The Rise and Fall of an Evolutionary Innovation: Contrasting Strategies of Venom Evolution in Ancient and Young Animals
Q36410878The Roles of Compensatory Evolution and Constraint in Aminoacyl tRNA Synthetase Evolution
Q46531338The Roles of Mutation, Selection, and Expression in Determining Relative Rates of Evolution in Mitochondrial versus Nuclear Genomes
Q28656467The SLC4A1 gene is under differential selective pressure in primates infected by Plasmodium falciparum and related parasites
Q28603306The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Q44463605The Tegula tango: a coevolutionary dance of interacting, positively selected sperm and egg proteins
Q33604841The Trw type IV secretion system of Bartonella mediates host-specific adhesion to erythrocytes
Q36185919The UT family of MHC class I loci unique to non-eutherian mammals has limited polymorphism and tissue specific patterns of expression in the opossum
Q64092167The Unique Evolutionary Trajectory and Dynamic Conformations of DR and IR/DR-Coexisting Plastomes of the Early Vascular Plant Selaginellaceae (Lycophyte)
Q41715719The Vat locus encodes for a CC-NBS-LRR protein that confers resistance to Aphis gossypii infestation and A. gossypii-mediated virus resistance
Q30361512The WRKY Transcription Factor Genes in Lotus japonicus
Q28119663The Worldwide Spread of the Tiger Mosquito as Revealed by Mitogenome Haplogroup Diversity
Q46202339The accuracy of species tree estimation under simulation: a comparison of methods
Q28650549The acquisition of novel N-glycosylation sites in conserved proteins during human evolution
Q43227386The alpha glycerophosphate cycle in Drosophila melanogaster VI. structure and evolution of enzyme paralogs in the genus Drosophila
Q35575349The ancient function of RB-E2F pathway: insights from its evolutionary history
Q33546685The ancient mammalian KRAB zinc finger gene cluster on human chromosome 8q24.3 illustrates principles of C2H2 zinc finger evolution associated with unique expression profiles in human tissues.
Q57616610The ash dieback invasion of Europe was founded by two genetically divergent individuals
Q22122162The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
Q35111417The barley genome sequence assembly reveals three additional members of the CslF (1,3;1,4)-β-glucan synthase gene family
Q37692482The birth of a human-specific neural gene by incomplete duplication and gene fusion
Q24653376The bovine lactation genome: insights into the evolution of mammalian milk
Q36935355The branch-site test of positive selection is surprisingly robust but lacks power under synonymous substitution saturation and variation in GC
Q38725801The breadth of antiviral activity of Apobec3DE in chimpanzees has been driven by positive selection
Q42183055The captured retroviral envelope syncytin-A and syncytin-B genes are conserved in the Spalacidae together with hemotrichorial placentation
Q24596009The cellulose synthase superfamily in fully sequenced plants and algae
Q28658002The changing epitome of species identification - DNA barcoding
Q39149590The changing face of the molecular evolutionary clock
Q48231676The characterization of the circadian clock in the olive fly Bactrocera oleae (Diptera: Tephritidae) reveals a Drosophila-like organization
Q52837910The chimpanzee GH locus: composition, organization, and evolution.
Q41968351The chloroplast genome of the green alga Schizomeris leibleinii (Chlorophyceae) provides evidence for bidirectional DNA replication from a single origin in the chaetophorales
Q40728109The chloroplast genome of the hexaploid Spartina maritima (Poaceae, Chloridoideae): Comparative analyses and molecular dating.
Q57922362The chromosome-level genome assemblies of two rattans (Calamus simplicifolius and Daemonorops jenkinsiana)
Q90641510The complete chloroplast genome of Myriophyllum spicatum reveals a 4-kb inversion and new insights regarding plastome evolution in Haloragaceae
Q36215208The complete genome sequence of the African buffalo (Syncerus caffer).
Q28661076The complete maternally and paternally inherited mitochondrial genomes of the endangered freshwater mussel Solenaia carinatus (Bivalvia: Unionidae) and implications for Unionidae taxonomy
Q90178633The complete mitochondrial genome of Calyptogena marissinica (Heterodonta: Veneroida: Vesicomyidae): Insight into the deep-sea adaptive evolution of vesicomyids
Q94544102The complete mitochondrial genome sequence of Scolopendra mutilans L. Koch, 1878 (Scolopendromorpha, Scolopendridae), with a comparative analysis of other centipede genomes
Q28727557The complete mitochondrial genome sequence of the black-capped capuchin (Cebus apella)
Q51192955The complete mitochondrial genomes of deep-sea squid (Bathyteuthis abyssicola), bob-tail squid (Semirossia patagonica) and four giant cuttlefish (Sepia apama, S. latimanus, S. lycidas and S. pharaonis), and their application to the phylogenetic anal
Q91585420The complete mitochondrial genomes of two vent squat lobsters, Munidopsis lauensis and M. verrilli: Novel gene arrangements and phylogenetic implications
Q89966775The complete mitogenome of Arion vulgaris Moquin-Tandon, 1855 (Gastropoda: Stylommatophora): mitochondrial genome architecture, evolution and phylogenetic considerations within Stylommatophora
Q34062794The complete mitogenome of the snakehead Channa argus (Perciformes: Channoidei): genome characterization and phylogenetic implications
Q34700391The complete sequence of the mitochondrial genome of Butomus umbellatus--a member of an early branching lineage of monocotyledons
Q37430078The complex evolutionary dynamics of Hsp70s: a genomic and functional perspective
Q42630006The complex evolutionary history of seeing red: molecular phylogeny and the evolution of an adaptive visual system in deep-sea dragonfishes (Stomiiformes: Stomiidae).
Q28652687The complex jujube genome provides insights into fruit tree biology
Q34985390The consequences of genetic drift for bacterial genome complexity
Q28658403The conserved Phe GH5 of importance for hemoglobin intersubunit contact is mutated in gadoid fish
Q35249640The contrasting phylodynamics of human influenza B viruses.
Q31044985The cysteine rich necrotrophic effector SnTox1 produced by Stagonospora nodorum triggers susceptibility of wheat lines harboring Snn1.
Q104486466The de novo genome assembly of Tapiscia sinensis and the transcriptomic and developmental bases of androdioecy
Q24645713The decay of the chromosomally encoded ccdO157 toxin-antitoxin system in the Escherichia coli species
Q39190511The determinants of the molecular substitution process in turtles
Q41436579The developmental brain gene NPAS3 contains the largest number of accelerated regulatory sequences in the human genome
Q64975917The divergence and positive selection of the plant-specific BURP-containing protein family.
Q34580074The diversity and evolution of Wolbachia ankyrin repeat domain genes
Q90734267The dopamine receptor D5 gene shows signs of independent erosion in toothed and baleen whales
Q42182561The draft genome assembly of Rhododendron delavayi Franch. var. delavayi
Q33581728The draft genome of Ruellia speciosa (Beautiful Wild Petunia: Acanthaceae).
Q30619470The draft genome of Tibetan hulless barley reveals adaptive patterns to the high stressful Tibetan Plateau
Q42664858The draft genome of a diploid cotton Gossypium raimondii
Q30436441The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes
Q94257869The draft genome of a wild barley genotype reveals its enrichment in genes related to biotic and abiotic stresses compared to cultivated barley
Q41510710The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet
Q101217368The draft genome of the blood pheasant (Ithaginis cruentus): Phylogeny and high-altitude adaptation
Q34448450The draft genome of the large yellow croaker reveals well-developed innate immunity
Q41692249The draft genome sequence of a desert tree Populus pruinosa
Q90392274The draft genomes of five agriculturally important African orphan crops
Q22122072The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan
Q37209150The drosomycin multigene family: three-disulfide variants from Drosophila takahashii possess antibacterial activity
Q22122074The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
Q33809026The dystrobrevin-binding protein 1 gene: features and networks
Q35811177The effect of chaperonin buffering on protein evolution
Q99587941The effect of hybridization on transposable element accumulation in an undomesticated fungal species
Q58701277The effect of maternal care on gene expression and DNA methylation in a subsocial bee
Q22305973The effect of recombination on the reconstruction of ancestral sequences
Q35232354The effect of species representation on the detection of positive selection in primate gene data sets
Q35033425The effects of linkage on comparative estimators of selection
Q46738351The effects of recombination, mutation and selection on the evolution of the Rp1 resistance genes in grasses
Q55311031The effects of repeated whole genome duplication events on the evolution of cytokinin signaling pathway.
Q35929555The effects of sample size on population genomic analyses--implications for the tests of neutrality
Q30360946The elusive nature of adaptive mitochondrial DNA evolution of an arctic lineage prone to frequent introgression.
Q33852980The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission.
Q50737669The euAP1 protein MPF3 represses MPF2 to specify floral calyx identity and displays crucial roles in Chinese lantern development in Physalis.
Q35036098The evolution and expression of the moth visual opsin family
Q37270789The evolution and functional significance of nested gene structures in Drosophila melanogaster
Q27330157The evolution and origin of animal Toll-like receptor signaling pathway revealed by network-level molecular evolutionary analyses
Q36582171The evolution and pathogenic mechanisms of the rice sheath blight pathogen
Q33619783The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants
Q37873957The evolution of RNA editing and pentatricopeptide repeat genes.
Q64055350The evolution of S100A7: an unusual gene expansion in Myotis bats
Q58091331The evolution of UDP-glycosyl/glucuronosyltransferase 1E (UGT1E) genes in bird lineages is linked to feeding habits but UGT2 genes is not
Q24657394The evolution of amastin surface glycoproteins in trypanosomatid parasites
Q37323325The evolution of animal chemosensory receptor gene repertoires: roles of chance and necessity
Q35821944The evolution of bat nucleic acid-sensing Toll-like receptors
Q45003619The evolution of cancer-related genes in hominoids
Q34397460The evolution of cichlid fish egg-spots is linked with a cis-regulatory change
Q28752648The evolution of color vision in nocturnal mammals
Q94141946The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract
Q38229464The evolution of embryo implantation
Q37272423The evolution of evolvability in microRNA target sites in vertebrates
Q45894148The evolution of fatty acid desaturases and cytochrome b5 in eukaryotes
Q36972707The evolution of gene expression and binding specificity of the largest transcription factor family in primates
Q36043417The evolution of gene expression and the transcriptome-phenotype relationship.
Q37015019The evolution of genes encoding for green fluorescent proteins: insights from cephalochordates (amphioxus)
Q88311780The evolution of immunity in relation to colonization and migration
Q50738717The evolution of lineage-specific clusters of single nucleotide substitutions in the human genome.
Q90380825The evolution of metabolism: How to test evolutionary hypotheses at the genomic level
Q34130043The evolution of mitochondrial genomes in modern frogs (Neobatrachia): nonadaptive evolution of mitochondrial genome reorganization
Q52838200The evolution of mitochondrial genomes in subterranean caviomorph rodents: adaptation against a background of purifying selection.
Q34459152The evolution of reproductive isolation in the Drosophila yakuba complex of species
Q92609806The evolution of sexual signaling is linked to odorant receptor tuning in perfume-collecting orchid bees
Q33836611The evolution of the coding exome of the Arabidopsis species--the influences of DNA methylation, relative exon position, and exon length
Q30990309The evolution of vertebrate tetraspanins: gene loss, retention, and massive positive selection after whole genome duplications
Q46890005The evolutionary appearance of non-cyanogenic hydroxynitrile glucosides in the Lotus genus is accompanied by the substrate specialization of paralogous β-glucosidases resulting from a crucial amino acid substitution
Q35889125The evolutionary dynamics of human influenza B virus
Q46397619The evolutionary fate of the chloroplast and nuclear rps16 genes as revealed through the sequencing and comparative analyses of four novel legume chloroplast genomes from Lupinus
Q28651512The evolutionary fate of the horizontally transferred agrobacterial mikimopine synthase gene in the genera Nicotiana and Linaria
Q28657922The evolutionary history of SLC6A4 and the role of plasticity in Macaca
Q28603746The evolutionary history of genes involved in spoken and written language: beyond FOXP2.
Q28743020The evolutionary history of the SAL1 gene family in eutherian mammals
Q21034108The evolutionary host switches of Polychromophilus: a multi-gene phylogeny of the bat malaria genus suggests a second invasion of mammals by a haemosporidian parasite
Q95279994The evolutionary origins of the cat attractant nepetalactone in catnip
Q37338186The evolutionary pattern and the regulation of stearoyl-CoA desaturase genes
Q48233174The evolutionary process of mammalian sex determination genes focusing on marsupial SRYs
Q41953749The evolutionary rate variation among genes of HOG-signaling pathway in yeast genomes
Q56897282The evolutionary rates of eukaryotic RNA polymerases and of their transcription factors are affected by the level of concerted evolution of the genes they transcribe
Q28749020The evolutionary trajectory of mitochondrial carrier family during metazoan evolution
Q33519714The expansion of amino-acid repeats is not associated to adaptive evolution in mammalian genes
Q33828503The expansion of the PRAME gene family in Eutheria
Q33654048The extinction dynamics of bacterial pseudogenes.
Q38495039The fate of duplicated genes in a polyploid plant genome
Q35040901The fate of recent duplicated genes following a fourth-round whole genome duplication in a tetraploid fish, common carp (Cyprinus carpio).
Q38950591The fire ant social chromosome supergene variant Sb shows low diversity but high divergence from SB
Q39867771The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights regarding plastome evolution in the legume family.
Q90291105The first complete mitochondrial genome of the Mariana Trench Freyastera benthophila (Asteroidea: Brisingida: Brisingidae) allows insights into the deep-sea adaptive evolution of Brisingida
Q36319137The first complete mitogenome of the South China deep-sea giant isopod Bathynomus sp. (Crustacea: Isopoda: Cirolanidae) allows insights into the early mitogenomic evolution of isopods
Q57092165The first draft genome of Lophophorus: A step forward for Phasianidae genomic diversity and conservation
Q28743160The first molecular phylogeny of Strepsiptera (Insecta) reveals an early burst of molecular evolution correlated with the transition to endoparasitism
Q55555247The first next-generation sequencing approach to the mitochondrial phylogeny of African monogenean parasites (Platyhelminthes: Gyrodactylidae and Dactylogyridae).
Q35815123The first whole genome and transcriptome of the cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures
Q21558776The footprint of genome architecture in the largest genome expansion in RNA viruses
Q85525455The functional importance of sequence versus expression variability of MHC alleles in parasite resistance
Q34213405The functional significance of common polymorphisms in zinc finger transcription factors
Q41516881The fungal core effector Pep1 is conserved across smuts of dicots and monocots
Q47730013The fungus that came in from the cold: dry rot's pre-adapted ability to invade buildings.
Q34768642The genesis of an exceptionally lethal venom in the timber rattlesnake (Crotalus horridus) revealed through comparative venom-gland transcriptomics
Q28482321The genetic basis of pollinator adaptation in a sexually deceptive orchid
Q96229566The genetic basis of sex determination in grapes
Q42044439The genetic code can cause systematic bias in simple phylogenetic models
Q36068581The genome and transcriptome of Trichormus sp. NMC-1: insights into adaptation to extreme environments on the Qinghai-Tibet Plateau
Q46280610The genome draft of coconut (Cocos nucifera).
Q49796452The genome of Austrofundulus limnaeus offers insights into extreme vertebrate stress tolerance and embryonic development.
Q100751404The genome of Chinese flowering cherry (Cerasus serrulata) provides new insights into Cerasus species
Q95327347The genome of Mekong tiger perch (Datnioides undecimradiatus) provides insights into the phylogenetic position of Lobotiformes and biological conservation
Q30459409The genome of Prunus mume
Q110669472The genome of a new anemone species (Actiniaria: Hormathiidae) provides insights into deep-sea adaptation
Q91386196The genome of a subterrestrial nematode reveals adaptations to heat
Q60313125The genome of an underwater architect, the caddisfly Stenopsyche tienmushanensis Hwang (Insecta: Trichoptera)
Q59454238The genome of common long-arm octopus Octopus minor
Q96683665The genome of pest Rhynchophorus ferrugineus reveals gene families important at the plant-beetle interface
Q89280556The genome of tapeworm Taenia multiceps sheds light on understanding parasitic mechanism and control of coenurosis disease
Q33785868The genome of the Antarctic-endemic copepod, Tigriopus kingsejongensis
Q64109196The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
Q98282970The genome of the common scale-backed Antbird (Willisornis poecilinotus) reveals lineage-specific adaptations
Q56654641The genome of the golden apple snail Pomacea canaliculata provides insight into stress tolerance and invasive adaptation
Q92211004The genome of the live-bearing fish Heterandria formosa implicates a role of conserved vertebrate genes in the evolution of placental fish
Q36605903The genome of the miiuy croaker reveals well-developed innate immune and sensory systems
Q57180711The genome of the oyster Saccostrea offers insight into the environmental resilience of bivalves
Q28709284The genome of the pear (Pyrus bretschneideri Rehd.).
Q35905464The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea.
Q27322887The genome of tolypocladium inflatum: evolution, organization, and expression of the cyclosporin biosynthetic gene cluster
Q96304196The genome sequence of star fruit (Averrhoa carambola)
Q28654783The genome sequence of the Antarctic bullhead notothen reveals evolutionary adaptations to a cold environment
Q36500676The genome sequence of the outbreeding globe artichoke constructed de novo incorporating a phase-aware low-pass sequencing strategy of F1 progeny
Q38741700The genome sequence of the wisent (Bison bonasus).
Q34515035The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut
Q28595417The genome, transcriptome, and proteome of the nematode Steinernema carpocapsae: evolutionary signatures of a pathogenic lifestyle
Q48302987The genomes of Crithidia bombi and C. expoeki, common parasites of bumblebees.
Q64070855The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition
Q35787022The genomes of three stocks comprising the most widely utilized live sporozoite Theileria parva vaccine exhibit very different degrees and patterns of sequence divergence
Q50211583The genomes of two Eutrema species provide insight into plant adaptation to high altitudes.
Q64228146The genomic basis for colonizing the freezing Southern Ocean revealed by Antarctic toothfish and Patagonian robalo genomes
Q57152521The genomic basis of cichlid fish adaptation within the deepwater "twilight zone" of Lake Malawi
Q28652539The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences
Q22065594The genomic landscape underlying phenotypic integrity in the face of gene flow in crows
Q102152160The genomic timeline of cichlid fish diversification across continents
Q33720292The geography and timing of genetic divergence in the lizard Phrynocephalus theobaldi on the Qinghai-Tibetan plateau.
Q46969394The glycogen synthase 2 gene (Gys2) displays parallel evolution between Old World and New World fruit bats
Q28648090The goose genome sequence leads to insights into the evolution of waterfowl and susceptibility to fatty liver
Q28757079The hearing gene Prestin reunites echolocating bats
Q40504427The heptad repeat region is a major selection target in MERS-CoV and related coronaviruses.
Q48164784The high-quality genome of Brassica napus cultivar 'ZS11' reveals the introgression history in semi-winter morphotype
Q89465476The high-quality genome of diploid strawberry (Fragaria nilgerrensis) provides new insights into anthocyanin accumulation
Q34607728The historical biogeography of the freshwater knifefishes using mitogenomic approaches: a mesozoic origin of the Asian notopterids (Actinopterygii: Osteoglossomorpha).
Q89637802The hornwort genome and early land plant evolution
Q34342479The hourglass and the early conservation models--co-existing patterns of developmental constraints in vertebrates
Q39045632The human blood DNA methylome displays a highly distinctive profile compared with other somatic tissues.
Q43977153The impact of HGT on phylogenomic reconstruction methods
Q33898490The impact of sex-role reversal on the diversity of the major histocompatibility complex: insights from the seahorse (Hippocampus abdominalis)
Q28658267The impact of the rate prior on Bayesian estimation of divergence times with multiple Loci
Q35599324The impact of within-herd genetic variation upon inferred transmission trees for foot-and-mouth disease virus
Q28603733The impacts of polyploidy, geographic and ecological isolations on the diversification of Panax (Araliaceae)
Q43445994The importance of taxon sampling in genomic studies: an example from the cyclooxygenases of teleost fishes
Q28472443The imprinted retrotransposon-like gene PEG11 (RTL1) is expressed as a full-length protein in skeletal muscle from Callipyge sheep
Q93027063The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat
Q42379552The influence of funding sources on the scientific method
Q46544535The influence of positive selection and trans-species evolution on DPB diversity in the golden snub-nosed monkeys (Rhinopithecus roxellana).
Q34472599The influence of selection for protein stability on dN/dS estimations
Q101217329The insertion of a mitochondrial selfish element into the nuclear genome and its consequences
Q34433472The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
Q47550309The invasive MED/Q Bemisia tabaci genome: a tale of gene loss and gene gain.
Q37738570The landscape of extreme genomic variation in the highly adaptable Atlantic killifish
Q35006798The large soybean (Glycine max) WRKY TF family expanded by segmental duplication events and subsequent divergent selection among subgroups
Q52732247The length scale of selection in protein evolution.
Q21128779The life cycle of Drosophila orphan genes
Q28603561The life history of retrocopies illuminates the evolution of new mammalian genes
Q28260358The ligand specificity of the G-protein-coupled receptor GPR34
Q46264189The limited role of differential fractionation in genome content variation and function in maize (Zea mays L.) inbred lines.
Q51608732The local-clock permutation test: a simple test to compare rates of molecular evolution on phylogenetic trees.
Q47237403The long intergenic non-coding RNA (lincRNA) landscape of the soybean genome.
Q34515488The loss of taste genes in cetaceans
Q38475785The low-recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression.
Q35581577The making of a new pathogen: insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species
Q36205100The malaria parasite Plasmodium vivax exhibits greater genetic diversity than Plasmodium falciparum
Q40808577The mammalian complement system as an epitome of host-pathogen genetic conflicts.
Q34361404The mate recognition protein gene mediates reproductive isolation and speciation in the Brachionus plicatilis cryptic species complex
Q55285293The mining and evolutionary investigation of AP2/ERF genes in pear (Pyrus).
Q37117402The mitochondrial genome map of Nelumbo nucifera reveals ancient evolutionary features
Q89072985The mitochondrial genome of red-necked phalarope Phalaropus lobatus (Charadriiformes: Scolopacidae) and phylogeny analysis among Scolopacidae
Q21192743The mitochondrial genome structure of Xenoturbella bocki (phylum Xenoturbellida) is ancestral within the deuterostomes
Q91526163The mitochondrial genomes of palaeopteran insects and insights into the early insect relationships
Q28749423The mitochondrial genomes of sponges provide evidence for multiple invasions by Repetitive Hairpin-forming Elements (RHE)
Q33905948The mode and tempo of hepatitis C virus evolution within and among hosts
Q46018708The molecular basis for venation patterning of pigmentation and its effect on pollinator attraction in flowers of Antirrhinum.
Q30391567The molecular chaperone DnaK is a source of mutational robustness
Q33571019The molecular evolution of PL10 homologs
Q40149073The molecular evolution of cytochrome P450 genes within and between drosophila species.
Q27485685The molecular evolution of four anti-malarial immune genes in the Anopheles gambiae species complex
Q47143026The molecular evolutionary dynamics of oxidative phosphorylation (OXPHOS) genes in Hymenoptera.
Q35831914The molecular origin and evolution of dim-light vision in mammals
Q24633881The monarch butterfly genome yields insights into long-distance migration
Q42097259The nature of mutations induced by replication–transcription collisions.
Q30398306The nonadaptive nature of the H1N1 2009 Swine Flu pandemic contrasts with the adaptive facilitation of transmission to a new host
Q35149450The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release
Q39044490The on-again, off-again relationship between mitochondrial genomes and species boundaries
Q37716131The ontogeny and evolution of sex-biased gene expression in Drosophila melanogaster.
Q36302234The origin and biogeographic diversification of fishes in the family Poeciliidae
Q33610758The origin and evolution of ARGFX homeobox loci in mammalian radiation
Q36890316The origin and functional transition of P34
Q33377872The origin and phylogeography of dog rabies virus
Q39545695The origin of the early differentiation of ivies (Hedera L.) and the radiation of the Asian Palmate group (Araliaceae).
Q60466403The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole genome sequencing
Q44777782The origins and evolution of ubiquitination sites
Q46836126The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics
Q92220937The persimmon (Diospyros oleifera Cheng) genome provides new insights into the inheritance of astringency and ancestral evolution
Q33491346The phylogenetic relationships of cynopterine fruit bats (Chiroptera: Pteropodidae: Cynopterinae).
Q36382693The phylogeny and biogeography of Hakea (Proteaceae) reveals the role of biome shifts in a continental plant radiation
Q36229843The phylogeny of Heliconia (Heliconiaceae) and the evolution of floral presentation
Q30413242The plant proteome folding project: structure and positive selection in plant protein families
Q54983839The polymorphisms of LCR, E6, and E7 of HPV-58 isolates in Yunnan, Southwest China.
Q47205634The pomegranate (Punica granatum L.) genome and the genomics of punicalagin biosynthesis
Q47177987The pomegranate (Punica granatum L.) genome provides insights into fruit quality and ovule developmental biology
Q21145026The population genetics of dN/dS
Q28541122The population structure of Vibrio cholerae from the Chandigarh Region of Northern India
Q43909626The position of gnetales among seed plants: overcoming pitfalls of chloroplast phylogenomics
Q46528972The precision of the hominid timescale estimated by relaxed clock methods
Q91496520The preponderance of nonsynonymous A-to-I RNA editing in coleoids is nonadaptive
Q55007641The prevalence of terraced treescapes in analyses of phylogenetic data sets.
Q51422695The probability of correctly resolving a split as an experimental design criterion in phylogenetics.
Q28607287The radish genome and comprehensive gene expression profile of tuberous root formation and development
Q22122094The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
Q52741150The rapid evolution of X-linked male-biased gene expression and the large-X effect in Drosophila yakuba, D. santomea, and their hybrids.
Q36533116The rate of adaptive evolution in animal mitochondria.
Q46280550The rate of evolution of postmating-prezygotic reproductive isolation in Drosophila
Q35188597The reconstructed ancestral subunit a functions as both V-ATPase isoforms Vph1p and Stv1p in Saccharomyces cerevisiae
Q89544366The red bayberry genome and genetic basis of sex determination
Q35232391The relationship between dN/dS and scaled selection coefficients
Q35065511The relationship between relative solvent accessibility and evolutionary rate in protein evolution
Q42290316The relationship between selection, network connectivity, and regulatory variation within a population of Capsella grandiora
Q34423802The relationship between the hierarchical position of proteins in the human signal transduction network and their rate of evolution
Q35150808The relationship between the structure of the tick-borne encephalitis virus strains and their pathogenic properties.
Q21128789The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine
Q28256176The role of DNA insertions in phenotypic differentiation between humans and other primates
Q38816124The role of defensive ecological interactions in the evolution of conotoxins.
Q53417972The role of ecological factors in shaping bat cone opsin evolution.
Q50951936The role of epistasis in protein evolution.
Q28710229The role of gene duplication and unconstrained selective pressures in the melanopsin gene family evolution and vertebrate circadian rhythm regulation
Q100526025The role of selection in the evolution of marine turtles mitogenomes
Q34456474The roles of gene duplication, gene conversion and positive selection in rodent Esp and Mup pheromone gene families with comparison to the Abp family
Q47728479The sacred lotus genome provides insights into the evolution of flowering plants
Q30422021The salmonid myostatin gene family: a novel model for investigating mechanisms that influence duplicate gene fate
Q46824407The same or not the same: lineage-specific gene expansions and homology relationships in multigene families in nematodes
Q39181249The seahorse genome and the evolution of its specialized morphology.
Q45387538The selection pressure analysis of chicken anemia virus structural protein gene VP1.
Q36145168The similar and different evolutionary trends of MATE family occurred between rice and Arabidopsis thaliana
Q31139076The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data
Q42991350The site-wise log-likelihood score is a good predictor of genes under positive selection
Q37738656The small non-coding RNA processing machinery of two living fossil species, lungfish and coelacanth, gives new insights into the evolution of the Argonaute protein family
Q28749023The smallest avian genomes are found in hummingbirds
Q55497200The soft explosive model of placental mammal evolution.
Q49552053The state of software for evolutionary biology.
Q90776971The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization
Q89980465The structure, functional evolution, and evolutionary trajectories of the H+-PPase gene family in plants
Q33988894The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice
Q53100967The sunflower (Helianthus annuus L.) genome reflects a recent history of biased accumulation of transposable elements.
Q36379280The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution
Q47852658The terpene synthase gene family in Tripterygium wilfordii harbors a labdane-type diterpene synthase among the monoterpene synthase TPS-b subfamily.
Q49790579The timescale of early land plant evolution.
Q28651042The transcriptome of the bowhead whale Balaena mysticetus reveals adaptations of the longest-lived mammal
Q46495782The transcriptome response of Heliconius melpomene larvae to a novel host plant
Q33907496The transcriptomes of the crucian carp complex (Carassius auratus) provide insights into the distinction between unisexual triploids and sexual diploids
Q39106115The transformer genes in the fig wasp Ceratosolen solmsi provide new evidence for duplications independent of complementary sex determination
Q33385141The trouble with sliding windows and the selective pressure in BRCA1.
Q21283993The ubiquilin gene family: evolutionary patterns and functional insights
Q111629316The unbearable uncertainty of Bayesian divergence time estimation
Q49901216The unique evolutionary pattern of the Hydroxyproline-rich glycoproteins superfamily in Chinese white pear (Pyrus bretschneideri).
Q28754812The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages
Q33594401The use of orthologous sequences to predict the impact of amino acid substitutions on protein function
Q28730241The voltage-gated potassium channel subfamily KQT member 4 (KCNQ4) displays parallel evolution in echolocating bats
Q46553634The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols
Q92097515The water lily genome and the early evolution of flowering plants
Q22065285The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage.
Q43690251The wheat powdery mildew genome shows the unique evolution of an obligate biotroph
Q64089510The wild sweetpotato (Ipomoea trifida) genome provides insights into storage root development
Q34285323The yak genome and adaptation to life at high altitude
Q55078231Theoretical Foundation of the RelTime Method for Estimating Divergence Times from Variable Evolutionary Rates.
Q34447269Thermodynamic system drift in protein evolution
Q92513687Thirteen New Plastid Genomes from Mixotrophic and Autotrophic Species Provide Insights into Heterotrophy Evolution in Neottieae Orchids
Q37083251Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling
Q46526351Three duplication events and variable molecular evolution characteristics involved in multiple GGPS genes of six Solanaceae species
Q34276079Three genome-based phylogeny of Cupressaceae s.l.: further evidence for the evolution of gymnosperms and Southern Hemisphere biogeography
Q37357887Three-fingered RAVERs: Rapid Accumulation of Variations in Exposed Residues of snake venom toxins
Q28741562Time dependency of molecular evolutionary rates? Yes and no
Q35224851Time-calibrated phylogenomics of the classical swine fever viruses: genome-wide bayesian coalescent approach
Q57094050Time-calibrated phylogenomics of the porcine epidemic diarrhea virus: genome-wide insights into the spatio-temporal dynamics
Q55660623Tissue Specificity and Dynamics of Sex-Biased Gene Expression in a Common Frog Population with Differentiated, Yet Homomorphic, Sex Chromosomes.
Q55427470Tissue-Specific Transcriptome for Poeciliopsis prolifica Reveals Evidence for Genetic Adaptation Related to the Evolution of a Placental Fish.
Q91062938Tissue-specific expression profiles and positive selection analysis in the tree swallow (Tachycineta bicolor) using a de novo transcriptome assembly
Q28742081To be or not to be the odd one out--allele-specific transcription in pentaploid dogroses (Rosa L. sect. Caninae (DC.) Ser)
Q89076097Toll-Like Receptor Evolution in Birds: Gene Duplication, Pseudogenization, and Diversifying Selection
Q33526680Towards realistic benchmarks for multiple alignments of non-coding sequences
Q39744708Towards sub-quadratic time and space complexity solutions for the dated tree reconciliation problem
Q91708361Towards the Complete Goat Pan-Genome by Recovering Missing Genomic Segments From the Reference Genome
Q39395608Tracing Genetic Exchange and Biogeography of Cryptococcus neoformans var. grubii at the Global Population Level.
Q41747345Tracing evolutionary relicts of positive selection on eight malaria-related immune genes in mammals
Q64092163Tracing the Evolution of the Plastome and Mitogenome in the Chloropicophyceae Uncovered Convergent tRNA Gene Losses and a Variant Plastid Genetic Code
Q37270737Tracing the evolution of streptophyte algae and their mitochondrial genome
Q52593449Tracing the evolution of the heterotrimeric G protein α subunit in Metazoa.
Q54675057Tracing the history and biogeography of the Australian blindsnake radiation
Q91834671Tracing the origin and evolution history of methylation-related genes in plants
Q47259859Tracing the temporal and spatial origins of island endemics in the Mediterranean region: a case study from the citrus family (Ruta L., Rutaceae).
Q59340389Tracing whale myoglobin evolution by resurrecting ancient proteins
Q30366501Tracking the molecular evolution of calcium permeability in a nicotinic acetylcholine receptor
Q34161860Tracking viral evolution during a disease outbreak: the rapid and complete selective sweep of a circovirus in the endangered Echo parakeet
Q36439819Trade-off between selection for dosage compensation and masculinization on the avian Z chromosome
Q89661626Trait differentiation and modular toxin expression in palm-pitvipers
Q35451815Trans genomic capture and sequencing of primate exomes reveals new targets of positive selection
Q33627650Trans-species polymorphism and selection in the MHC class II DRA genes of domestic sheep
Q59789341Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants
Q57793440Transcriptional Heterogeneity of VGII Compared with Non-VGII Lineages Underpins Key Pathogenicity Pathways
Q42345745Transcriptional Interference Promotes Rapid Expression Divergence of Drosophila Nested Genes
Q34892925Transcriptional abundance is not the single force driving the evolution of bacterial proteins
Q58774346Transcriptional and Translational Landscape of Equine Torovirus
Q34626417Transcriptional diversity during lineage commitment of human blood progenitors
Q28476544Transcriptional profiling of human liver identifies sex-biased genes associated with polygenic dyslipidemia and coronary artery disease
Q60313487Transcriptome Comparison Reveals Distinct Selection Patterns in Domesticated and Wild Agave Species, the Important CAM Plants
Q37740669Transcriptome Comparison Reveals the Adaptive Evolution of Two Contrasting Ecotypes of Zn/Cd Hyperaccumulator Sedum alfredii Hance.
Q92702218Transcriptome Landscape Variation in the Genus Thymus
Q35902495Transcriptome Sequencing of Lima Bean (Phaseolus lunatus) to Identify Putative Positive Selection in Phaseolus and Legumes
Q28596932Transcriptome analyses provide insights into the phylogeny and adaptive evolution of the mangrove fern genus Acrostichum
Q33861065Transcriptome analysis explores genes related to shikonin biosynthesis in Lithospermeae plants and provides insights into Boraginales' evolutionary history
Q36152326Transcriptome analysis of a North American songbird, Melospiza melodia
Q35020293Transcriptome analysis of female reproductive tissues of Anastrepha obliqua and molecular evolution of eggshell proteins in the fraterculus group.
Q35171755Transcriptome analysis of sarracenia, an insectivorous plant
Q34141526Transcriptome analysis of silver carp (Hypophthalmichthys molitrix) by paired-end RNA sequencing.
Q28611097Transcriptome analysis of the Holly mangrove Acanthus ilicifolius and its terrestrial relative, Acanthus leucostachyus, provides insights into adaptation to intertidal zones
Q28542382Transcriptome analysis of the oil-rich tea plant, Camellia oleifera, reveals candidate genes related to lipid metabolism
Q34198313Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio)
Q33764146Transcriptome assemblies for studying sex-biased gene expression in the guppy, Poecilia reticulata
Q28706312Transcriptome characterisation of Pinus tabuliformis and evolution of genes in the Pinus phylogeny
Q28534643Transcriptome characterisation of the ant Formica exsecta with new insights into the evolution of desaturase genes in social hymenoptera
Q33784442Transcriptome of Pterospermum kingtungense provides implications on the mechanism underlying its rapid vegetative growth and limestone adaption
Q34278890Transcriptome of the Deep-Sea Black Scabbardfish, Aphanopus carbo (Perciformes: Trichiuridae): Tissue-Specific Expression Patterns and Candidate Genes Associated to Depth Adaptation
Q98735786Transcriptome of the Southern Muriqui Brachyteles arachnoides (Primates:Platyrrhini), a Critically Endangered New World Monkey: Evidence of Adaptive Evolution
Q36265284Transcriptome profiling of the floating-leaved aquatic plant Nymphoides peltata in response to flooding stress
Q46318385Transcriptome resources for the frogs Lithobates clamitans and Pseudacris regilla, emphasizing antimicrobial peptides and conserved loci for phylogenetics
Q46238390Transcriptome sequence-based phylogeny of chalcidoid wasps (Hymenoptera: Chalcidoidea) reveals a history of rapid radiations, convergence, and evolutionary success.
Q28680702Transcriptome sequences resolve deep relationships of the grape family
Q28712013Transcriptome sequencing and annotation for the Jamaican fruit bat (Artibeus jamaicensis)
Q28660408Transcriptome sequencing and phylogenomic resolution within Spalacidae (Rodentia)
Q35932806Transcriptome sequencing of Crucihimalaya himalaica (Brassicaceae) reveals how Arabidopsis close relative adapt to the Qinghai-Tibet Plateau
Q57034343Transcriptome sequencing of Pinus kesiya var. langbianensis and comparative analysis in the Pinus phylogeny
Q92515510Transcriptome-Wide Patterns of the Genetic and Expression Variations in Two Sympatric Schizothoracine Fishes in a Tibetan Plateau Glacier Lake
Q36196737Transcriptome-based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection
Q35854241Transcriptome-derived evidence supports recent polyploidization and a major phylogeographic division in Trithuria submersa (Hydatellaceae, Nymphaeales).
Q38383333Transcriptome-wide patterns of divergence during allopatric evolution.
Q35856060Transcriptomes reveal the genetic mechanisms underlying ionic regulatory adaptations to salt in the crab-eating frog
Q33912456Transcriptomic analysis of candidate osmoregulatory genes in the eastern oyster Crassostrea virginica.
Q34898453Transcriptomic analysis of the phytopathogenic oomycete Phytophthora cactorum provides insights into infection-related effectors.
Q64052051Transcriptomic analysis reveals insights into deep-sea adaptations of the dominant species, Shinkaia crosnieri (Crustacea: Decapoda: Anomura), inhabiting both hydrothermal vents and cold seeps
Q35923756Transcriptomic and phytochemical analysis of the biosynthesis of characteristic constituents in tea (Camellia sinensis) compared with oil tea (Camellia oleifera).
Q28652852Transcriptomic characterization of the immunogenetic repertoires of heteromyid rodents
Q37514507Transcriptomic comparison of invasive bigheaded carps (Hypophthalmichthys nobilis and Hypophthalmichthys molitrix) and their hybrids
Q58800744Transcriptomic comparison reveals genetic variation potentially underlying seed developmental evolution of soybeans
Q31140721Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects : Insect insulator proteins.
Q38914150Transcriptomic insights into genetic diversity of protein-coding genes in X. laevis.
Q34082875Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever
Q37252583Transient compartmentalization of simian immunodeficiency virus variants in the breast milk of african green monkeys
Q33843863Translation Initiation from Conserved Non-AUG Codons Provides Additional Layers of Regulation and Coding Capacity
Q40950876Transposable Element Misregulation Is Linked to the Divergence between Parental piRNA Pathways in Drosophila Hybrids
Q38987106Transposition mechanism, molecular characterization and evolution of IS6110, the specific evolutionary marker of Mycobacterium tuberculosis complex
Q37739557Tree shrew database (TreeshrewDB): a genomic knowledge base for the Chinese tree shrew.
Q90845016Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data
Q33696515Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins
Q45385758Trends in amino acid usage across the class Mollicutes.
Q33382015Trends in prokaryotic evolution revealed by comparison of closely related bacterial and archaeal genomes
Q40309874Trends in substitution models of molecular evolution
Q56267124Trichoplax genomes reveal profound admixture and suggest stable wild populations without bisexual reproduction
Q33799636Trilocular phenotype in Brassica juncea L. resulted from interruption of CLAVATA1 gene homologue (BjMc1) transcription
Q45840305Tropomyosin is a nice marker gene for phylogenetic analysis of molluscs
Q46426885Trpc2 pseudogenization dynamics in bats reveal ancestral vomeronasal signaling, then pervasive loss.
Q47474645Trunk dental tissue evolved independently from underlying dermal bony plates but is associated with surface bones in living odontode-bearing catfish
Q28751765Tubulin evolution in insects: gene duplication and subfunctionalization provide specialized isoforms in a functionally constrained gene family
Q90731837Tung Tree (Vernicia fordii) Genome Provides A Resource for Understanding Genome Evolution and Improved Oil Production
Q28703601Turning gold into 'junk': transposable elements utilize central proteins of cellular networks
Q92451154Turnover of ribosome-associated transcripts from de novo ORFs produces gene-like characteristics available for de novo gene emergence in wild yeast populations
Q21195825Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
Q64284577Two Coxsackievirus B3 outbreaks associated with hand, foot, and mouth disease in China and the evolutionary history worldwide
Q42242200Two Highly Similar Poplar Paleo-subgenomes Suggest an Autotetraploid Ancestor of Salicaceae Plants
Q33895251Two Theileria parva CD8 T cell antigen genes are more variable in buffalo than cattle parasites, but differ in pattern of sequence diversity
Q35822359Two contemporaneous mitogenomes from terminal Pleistocene burials in eastern Beringia
Q46964614Two evolutionarily distinct classes of paleopolyploidy
Q33532766Two frequenins in Drosophila: unveiling the evolutionary history of an unusual neuronal calcium sensor (NCS) duplication
Q41903471Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges.
Q34428220Two goose-type lysozymes in Mytilus galloprovincialis: possible function diversification and adaptive evolution.
Q37432335Two rapidly evolving genes contribute to male fitness in Drosophila
Q33364519Two-Step Functional Innovation of the Stem-Cell Factors WUS/WOX5 during Plant Evolution
Q118110163Ultraconserved elements improve resolution of marmot phylogeny and offer insights into biogeographic history
Q27334811Ultrafast evolution and loss of CRISPRs following a host shift in a novel wildlife pathogen, Mycoplasma gallisepticum
Q47315261Unbiased estimate of synonymous and non-synonymous substitution rates with non-stationary base composition
Q28607240Uncertainty in the Timing of Origin of Animals and the Limits of Precision in Molecular Timescales
Q42590484Uncorrected nucleotide bias in mtDNA can mimic the effects of positive Darwinian selection.
Q35207816Uncovering adaptive evolution in the human lineage.
Q38690634Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes
Q46889913Uncovering sibling species in Radiolaria: evidence for ecological partitioning in a marine planktonic protist.
Q35079346Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing
Q91792615Understand the genomic diversity and evolution of fungal pathogen Candida glabrata by genome-wide analysis of genetic variations
Q43136115Understanding Brassicaceae evolution through ancestral genome reconstruction.
Q28708935Understanding phylogenetic incongruence: lessons from phyllostomid bats
Q34534863Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasite Cytinus hypocistis (Cytinaceae)
Q41954878Understanding the functional difference between growth arrest-specific protein 6 and protein S: an evolutionary approach
Q41860542Unequal recombination and evolution of the mating-type (MAT) loci in the pathogenic fungus Grosmannia clavigera and relatives
Q91899437Unexpected predicted length variation for the coding sequence of the sleep related gene, BHLHE41 in gorilla amidst strong purifying selection across mammals
Q102096979Unexpected rDNA divergence between two morphologically minimalistic nematodes with description of a new species (Tylenchomorpha: Tylenchidae)
Q28482708Unique features of odorant-binding proteins of the parasitoid wasp Nasonia vitripennis revealed by genome annotation and comparative analyses
Q30484404Unique genes in plants: specificities and conserved features throughout evolution
Q92860066Unique structure (construction and configuration) and evolution of the array of small serum protein genes of Protobothrops flavoviridis snake
Q46278243Universal Patterns of Selection in Cancer and Somatic Tissues
Q35618960Universal distribution of mutational effects on protein stability, uncoupling of protein robustness from sequence evolution and distinct evolutionary modes of prokaryotic and eukaryotic proteins
Q36128712Unleashing the genome of brassica rapa
Q43472103Unlocking the barley genome by chromosomal and comparative genomics
Q47848644Unparalleled replacement of native mitochondrial genes by foreign homologs in a holoparasitic plant
Q35018626Unprecedented levels of horizontal gene transfer among spatially co-occurring Shewanella bacteria from the Baltic Sea.
Q35181397Unraveling patterns of site-to-site synonymous rates variation and associated gene properties of protein domains and families
Q34515991Unraveling the effects of selection and demography on immune gene variation in free-ranging plains zebra (Equus quagga) populations
Q22162486Unresolved molecular phylogenies of gibbons and siamangs (Family: Hylobatidae) based on mitochondrial, Y-linked, and X-linked loci indicate a rapid Miocene radiation or sudden vicariance event
Q46503417Unusual Diversity of Myoglobin Genes in the Lungfish
Q33709754Unusual conservation among genes encoding small secreted salivary gland proteins from a gall midge
Q47841620Unusual evolutionary mechanisms to escape effector-triggered immunity in the fungal phytopathogen Leptosphaeria maculans.
Q34542786Unusual ratio between free thyroxine and free triiodothyronine in a long-lived mole-rat species with bimodal ageing
Q34788608Unusual tandem expansion and positive selection in subgroups of the plant GRAS transcription factor superfamily.
Q30387664Use of phylogenetics in the molecular epidemiology and evolutionary studies of viral infections
Q50000691Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case.
Q28661499Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles
Q36324534Using phylogenomics to understand the link between biogeographic origins and regional diversification in ratsnakes
Q31036870Using shifts in amino acid frequency and substitution rate to identify latent structural characters in base-excision repair enzymes
Q46801180Utility of the phylotoxigenic relationships among trichothecene-producing Fusarium species for predicting their mycotoxin-producing potential
Q59888892VESPA: Very large-scale Evolutionary and Selective Pressure Analyses
Q28656146Vampire bats exhibit evolutionary reduction of bitter taste receptor genes common to other bats
Q34527151Variable presence of the inverted repeat and plastome stability in Erodium
Q90726680Variation at an adhesin locus suggests sociality in natural populations of the yeast Saccharomyces cerevisiae
Q38601979Variation in DNA Methylation Is Not Consistently Reflected by Sociality in Hymenoptera.
Q35780515Variation in MHC genotypes in two populations of house sparrow (Passer domesticus) with different population histories
Q30313118Variation in auxin sensing guides AUX/IAA transcriptional repressor ubiquitylation and destruction.
Q36141118Variation in opsin genes correlates with signalling ecology in North American fireflies
Q35237790Variation in positively selected major histocompatibility complex class I loci in rufous-collared sparrows (Zonotrichia capensis).
Q28601504Variation in promiscuity and sexual selection drives avian rate of Faster-Z evolution
Q64091827Variation in secondary metabolite production potential in the Fusarium incarnatum-equiseti species complex revealed by comparative analysis of 13 genomes
Q37738603Variation in the Intensity of Selection on Codon Bias over Time Causes Contrasting Patterns of Base Composition Evolution in Drosophila
Q33918252Variation in the analysis of positively selected sites using nonsynonymous/synonymous rate ratios: an example using influenza virus
Q37335888Venom Insulins of Cone Snails Diversify Rapidly and Track Prey Taxa
Q46513046Venom Resistance as a Model for Understanding the Molecular Basis of Complex Coevolutionary Adaptations
Q42774204Venom down under: dynamic evolution of Australian elapid snake toxins
Q28743425Venom gland transcriptomes of two elapid snakes (Bungarus multicinctus and Naja atra) and evolution of toxin genes
Q30363247Vertebrate paralogous CRMPs in nervous system: evolutionary, structural, and functional interplay.
Q33843316Vertebrate paralogous MEF2 genes: origin, conservation, and evolution
Q27681285Vestigialization of an Allosteric Switch: Genetic and Structural Mechanisms for the Evolution of Constitutive Activity in a Steroid Hormone Receptor
Q35034984Virulence differences in Toxoplasma mediated by amplification of a family of polymorphic pseudokinases
Q37643802Virulence-affecting amino acid changes in the PA protein of H7N9 influenza A viruses
Q28659722Virus-like attachment sites and plastic CpG islands:landmarks of diversity in plant Del retrotransposons
Q30383578Viruses are a dominant driver of protein adaptation in mammals.
Q36106381Visual Pigments, Ocular Filters and the Evolution of Snake Vision.
Q39582392Visual pigment molecular evolution in the Trinidadian pike cichlid (Crenicichla frenata): a less colorful world for neotropical cichlids?
Q35642363Visual system evolution and the nature of the ancestral snake.
Q34962015Vitellogenin underwent subfunctionalization to acquire caste and behavioral specific expression in the harvester ant Pogonomyrmex barbatus
Q90260173Vulnerability to fishing and life-history traits correlate with the load of deleterious mutations in teleosts
Q84629863WRKY gene family evolution in Arabidopsis thaliana
Q58605271WRKY transcription factors in legumes
Q36141973Waking the undead: Implications of a soft explosive model for the timing of placental mammal diversification.
Q22122188Was the universal common ancestry proved?
Q31030149Wasabi: An Integrated Platform for Evolutionary Sequence Analysis and Data Visualization.
Q37775232Watching the clock: studying variation in rates of molecular evolution between species
Q36512473Water pollutant fingerprinting tracks recent industrial transfer from coastal to inland China: a case study.
Q27301792Weak Polygenic Selection Drives the Rapid Adaptation of the Chemosensory System: Lessons from the Upstream Regions of the Major Gene Families
Q33836699Weak negative and positive selection and the drift load at splice sites
Q97644549What Matters for C4 Transporters: Evolutionary Changes of Phosphoenolpyruvate Transporter for C4 Photosynthesis
Q26995567What RNA World? Why a Peptide/RNA Partnership Merits Renewed Experimental Attention
Q64059551What lies beneath? Molecular evolution during the radiation of caecilian amphibians
Q37779429What makes an egg unique? Clues from evolutionary scenarios of egg-specific genes
Q28681310When parasitic wasps hijacked viruses: genomic and functional evolution of polydnaviruses
Q42223045Where do phosphosites come from and where do they go after gene duplication?
Q99616703Whitefly genomes contain ribotoxin coding genes acquired from plants
Q28552799Whole Genome Sequencing Allows Better Understanding of the Evolutionary History of Leptospira interrogans Serovar Hardjo
Q92988081Whole Genome Sequencing of Chinese White Dolphin (Sousa chinensis) for High-Throughput Screening of Antihypertensive Peptides
Q89456965Whole Genome Sequencing of the Pirarucu (Arapaima gigas) Supports Independent Emergence of Major Teleost Clades
Q33875336Whole Mitogenomes Reveal the History of Swamp Buffalo: Initially Shaped by Glacial Periods and Eventually Modelled by Domestication
Q50284269Whole genome diversity of inherited chromosomally integrated HHV-6 derived from healthy individuals of diverse geographic origin.
Q39904072Whole genome duplication in coast redwood (Sequoia sempervirens) and its implications for explaining the rarity of polyploidy in conifers
Q28652375Whole genome sequence and analysis of the Marwari horse breed and its genetic origin
Q36219039Whole genome sequencing and comparative genomics of closely related Fusarium Head Blight fungi: Fusarium graminearum, F. meridionale and F. asiaticum.
Q34264783Whole genome sequencing and evolutionary analysis of human papillomavirus type 16 in central China
Q24633552Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance
Q28730284Whole genome sequencing to investigate the emergence of clonal complex 23 Neisseria meningitidis serogroup Y disease in the United States
Q64102704Whole genomes and transcriptomes reveal adaptation and domestication of pistachio
Q21284046Whole mitochondrial genome sequencing of domestic horses reveals incorporation of extensive wild horse diversity during domestication
Q35216150Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam poplars, Populus balsamifera and P. trichocarpa (Salicaceae).
Q52375254Whole-Genome Analysis Illustrates Global Clonal Population Structure of the Ubiquitous Dermatophyte Pathogen Trichophyton rubrum.
Q33650338Whole-Genome Identification and Expression Pattern of the Vicinal Oxygen Chelate Family in Rapeseed (Brassica napus L.).
Q35958556Whole-Genome Identification, Phylogeny, and Evolution of the Cytochrome P450 Family 2 (CYP2) Subfamilies in Birds
Q58785837Whole-Genome Resequencing and Pan-Transcriptome Reconstruction Highlight the Impact of Genomic Structural Variation on Secondary Metabolite Gene Clusters in the Grapevine Esca Pathogen
Q98196700Whole-exome sequencing and genome-wide evolutionary analyses identify novel candidate genes associated with infrared perception in pit vipers
Q35182033Whole-genome analysis revealed the positively selected genes during the differentiation of indica and temperate japonica rice
Q21092432Whole-genome and chromosome evolution associated with host adaptation and speciation of the wheat pathogen Mycosphaerella graminicola
Q55295094Whole-genome de novo sequencing reveals unique genes that contributed to the adaptive evolution of the Mikado pheasant.
Q36287362Whole-genome duplication and molecular evolution in Cornus L. (Cornaceae) - Insights from transcriptome sequences
Q64099197Whole-genome resequencing of 472 Vitis accessions for grapevine diversity and demographic history analyses
Q95817437Whole-genome sequence of Phellinus gilvus (mulberry Sanghuang) reveals its unique medicinal values
Q61811419Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium
Q89823427Whole-genome sequencing and analysis of the Chinese herbal plant Gelsemium elegans
Q38866018Whole-genome sequencing of Theileria parva strains provides insight into parasite migration and diversification in the African continent.
Q35385428Whole-genome sequencing of the snub-nosed monkey provides insights into folivory and evolutionary history.
Q89471089Whole-genome sequencing of wild Siberian musk deer (Moschus moschiferus) provides insights into its genetic features
Q96304171Whole-genome sequencing provides insights into the genetic diversity and domestication of bitter gourd (Momordica spp.).
Q36662133Whole-genome sequencing reveals small genomic regions of introgression in an introduced crater lake population of threespine stickleback
Q35765125Why Selection Might Be Stronger When Populations Are Small: Intron Size and Density Predict within and between-Species Usage of Exonic Splice Associated cis-Motifs
Q39084194Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes.
Q41827447Why do more divergent sequences produce smaller nonsynonymous/synonymous rate ratios in pairwise sequence comparisons?
Q33549713Why genes evolve faster on secondary chromosomes in bacteria
Q92796628Why is Amazonia a 'source' of biodiversity? Climate-mediated dispersal and synchronous speciation across the Andes in an avian group (Tityrinae)
Q24622819Why time matters: codon evolution and the temporal dynamics of dN/dS
Q28654603Wider sampling reveals a non-sister relationship for geographically contiguous lineages of a marine mussel
Q36316970Widespread Positive Selection Drives Differentiation of Centromeric Proteins in the Drosophila melanogaster subgroup
Q41839674Widespread Recurrent Patterns of Rapid Repeat Evolution in the Kinetochore Scaffold KNL1.
Q37163441Widespread adaptive evolution during repeated evolutionary radiations in New World lupins
Q30993138Widespread and Adaptive Alterations in Genome-Wide Gene Expression Associated with Ecological Divergence of Two Oryza Species
Q36102984Widespread convergence in toxin resistance by predictable molecular evolution
Q102152430Widespread endogenization of giant viruses shapes genomes of green algae
Q90751051Widespread nocturnality of living birds stemming from their common ancestor
Q49299834Widespread signatures of selection for secreted peptidases in a fungal plant pathogen.
Q36170821Wild Carrot Differentiation in Europe and Selection at DcAOX1 Gene?
Q27677969X-ray Structure Analysis and Characterization of AFUEI, an Elastase Inhibitor from Aspergillus fumigatus
Q28554545XRN1 Is a Species-Specific Virus Restriction Factor in Yeasts
Q28656291Y chromosomes of 40% Chinese descend from three Neolithic super-grandfathers
Q34335533ZBED evolution: repeated utilization of DNA transposons as regulators of diverse host functions
Q38727034Zinc Cluster Transcription Factors Alter Virulence in Candida albicans
Q56334524Zygosaccharomyces pseudobailii, another yeast interspecies hybrid that regained fertility by damaging one of its MAT loci
Q33521094aes, the gene encoding the esterase B in Escherichia coli, is a powerful phylogenetic marker of the species
Q45708935gKaKs: the pipeline for genome-level Ka/Ks calculation
Q42585792maxAlike: maximum likelihood-based sequence reconstruction with application to improved primer design for unknown sequences
Q51167618mtDNA lineage expansions in Sherpa population suggest adaptive evolution in Tibetan highlands.
Q38862501node.dating: dating ancestors in phylogenetic trees in R.
Q36178058p53 gene discriminates two ecologically divergent sister species of pine voles
Q38635802phydms: software for phylogenetic analyses informed by deep mutational scanning
Q36347226phylo-node: A molecular phylogenetic toolkit using Node.js
Q37558169uPEPperoni: an online tool for upstream open reading frame location and analysis of transcript conservation
Q33756736webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser
Q36749416xREI: a phylo-grammar visualization webserver
Q33608350πBUSS: a parallel BEAST/BEAGLE utility for sequence simulation under complex evolutionary scenarios
Q110693556Phylogeny and age of cockroaches: a reanalysis of mitogenomes with selective fossil calibrations

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