| scholarly article | Q13442814 |
| P50 | author | Richard M. Durbin | Q4583003 |
| Ewan Birney | Q4869199 | ||
| Abel Ureta-Vidal | Q28322649 | ||
| Albert J. Vilella | Q30503083 | ||
| P2093 | author name string | Jessica Severin | |
| Li Heng | |||
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| P407 | language of work or name | English | Q1860 |
| P921 | main subject | phylogenetics | Q171184 |
| P304 | page(s) | 327-35 | |
| P577 | publication date | 2009-02-01 | |
| P1433 | published in | Genome Research | Q5533485 |
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| Q95818134 | High-throughput capturing and characterization of mutations in essential genes of Caenorhabditis elegans |
| Q33853987 | High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource |
| Q50080966 | Highly Expressed Genes Are Preferentially Co-Opted for C4 Photosynthesis. |
| Q39596997 | Highly conserved elements discovered in vertebrates are present in non-syntenic loci of tunicates, act as enhancers and can be transcribed during development |
| Q42007006 | Highly diversified expansions shaped the evolution of membrane bound proteins in metazoans |
| Q40797079 | Histochemical analysis of testis specific gene 13 in human normal and malignant tissues |
| Q42870574 | Historical constraints on vertebrate genome evolution. |
| Q51551021 | Historical profiling of maize duplicate genes sheds light on the evolution of C4 photosynthesis in grasses. |
| Q34426574 | Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs |
| Q26750493 | Homoeologs: What Are They and How Do We Infer Them? |
| Q47376400 | HuPho: the human phosphatase portal |
| Q35216525 | Human dominant disease genes are enriched in paralogs originating from whole genome duplication |
| Q46062139 | Human testis-specific genes are under relaxed negative selection |
| Q33864635 | Identification and characterization of KCASH2 and KCASH3, 2 novel Cullin3 adaptors suppressing histone deacetylase and Hedgehog activity in medulloblastoma. |
| Q36054040 | Identification and characterization of lineage-specific highly conserved noncoding sequences in Mammalian genomes |
| Q40880372 | Identification of Drosophila Zfh2 as a Mediator of Hypercapnic Immune Regulation by a Genome-Wide RNA Interference Screen. |
| Q37742959 | Identification of MicroRNA Targets of Capsicum spp. Using MiRTrans-a Trans-Omics Approach |
| Q35693465 | Identification of Ohnolog Genes Originating from Whole Genome Duplication in Early Vertebrates, Based on Synteny Comparison across Multiple Genomes |
| Q37363175 | Identification of deleterious mutations within three human genomes |
| Q33829884 | Identification of introns harboring functional sequence elements through positional conservation. |
| Q31061948 | Identification of novel human damage response proteins targeted through yeast orthology. |
| Q35616862 | Identification of potential HIV restriction factors by combining evolutionary genomic signatures with functional analyses |
| Q24609000 | Identification of transcriptional regulators in the mouse immune system |
| Q35774036 | Improved Detection and Characterization of Copy Number Variations Among Diverse Pig Breeds by Array CGH. |
| Q35161245 | Improved evidence-based genome-scale metabolic models for maize leaf, embryo, and endosperm |
| Q35367107 | Improved gene tree error correction in the presence of horizontal gene transfer |
| Q53589942 | Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology |
| Q36663988 | Improving genome-wide scans of positive selection by using protein isoforms of similar length |
| Q34768428 | Improving the assessment of the outcome of nonsynonymous SNVs with a consensus deleteriousness score, Condel. |
| Q34761563 | Improving the measurement of semantic similarity between gene ontology terms and gene products: insights from an edge- and IC-based hybrid method |
| Q38619658 | In silico prediction and characterization of secondary metabolite biosynthetic gene clusters in the wheat pathogen Zymoseptoria tritici |
| Q44723240 | In-depth proteomic analysis of whole testis tissue from the adult rhesus macaque |
| Q38714433 | Incorporating tree-thinking and evolutionary time scale into developmental biology |
| Q30979181 | Increasing alternative promoter repertories is positively associated with differential expression and disease susceptibility |
| Q92724692 | Independent Transposon Exaptation Is a Widespread Mechanism of Redundant Enhancer Evolution in the Mammalian Genome |
| Q26766407 | Inferring Orthologs: Open Questions and Perspectives |
| Q34569170 | Inferring evolution of gene duplicates using probabilistic models and nonparametric belief propagation |
| Q34558713 | Inferring hierarchical orthologous groups from orthologous gene pairs |
| Q36434699 | Information Commons for Rice (IC4R). |
| Q28708852 | Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequence |
| Q28611130 | Insights into the evolution of longevity from the bowhead whale genome |
| Q34465001 | Insights into the evolutionary features of human neurodegenerative diseases |
| Q89983086 | Integrated structural and evolutionary analysis reveals common mechanisms underlying adaptive evolution in mammals |
| Q118108068 | Integrating gene annotation with orthology inference at scale |
| Q34518118 | Integration of Orthogonal Signaling by the Notch and Dpp Pathways in Drosophila |
| Q36337749 | Intergenic Alu exonisation facilitates the evolution of tissue-specific transcript ends. |
| Q34173743 | Interrogation of alternative splicing events in duplicated genes during evolution |
| Q38850632 | Introgression and repeated co-option facilitated the recurrent emergence of C4 photosynthesis among close relatives |
| Q36434704 | JuncDB: an exon-exon junction database |
| Q34552862 | Kerfuffle: a web tool for multi-species gene colocalization analysis |
| Q35968822 | Key Role of Amino Acid Repeat Expansions in the Functional Diversification of Duplicated Transcription Factors |
| Q116816621 | Kingella pumchi sp. nov., an organism isolated from human vertebral puncture tissue |
| Q35753710 | Klf15 Is Critical for the Development and Differentiation of Drosophila Nephrocytes |
| Q42640079 | Large scale comparison of global gene expression patterns in human and mouse. |
| Q58482881 | Large-Scale Parsimony Analysis of Metazoan Indels in Protein-Coding Genes |
| Q37544701 | Large-scale inference of gene function through phylogenetic annotation of Gene Ontology terms: case study of the apoptosis and autophagy cellular processes |
| Q37392827 | Late-replicating CNVs as a source of new genes |
| Q42696657 | Learning causal networks with latent variables from multivariate information in genomic data |
| Q38696679 | Lineage-specific duplications of Muroidea Faim and Spag6 genes and atypical accelerated evolution of the parental Spag6 gene |
| Q64293430 | Linking genetic, metabolic, and phenotypic diversity among Saccharomyces cerevisiae strains using multi-omics associations |
| Q37689133 | Lipid droplet biology and evolution illuminated by the characterization of a novel perilipin in teleost fish. |
| Q90596686 | Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation |
| Q42143357 | Long-term asymmetrical acceleration of protein evolution after gene duplication |
| Q58064247 | Loose ends: almost one in five human genes still have unresolved coding status |
| Q94464424 | Loss of Arabidopsis β-COP Function Affects Golgi Structure, Plant Growth and Tolerance to Salt Stress |
| Q28295827 | Low-pass DNA sequencing of 1200 Sardinians reconstructs European Y-chromosome phylogeny |
| Q33522314 | MSOAR 2.0: Incorporating tandem duplications into ortholog assignment based on genome rearrangement |
| Q64106608 | Magic roundabout is an endothelial-specific ohnolog of ROBO1 which neo-functionalized to an essential new role in angiogenesis |
| Q30041295 | Malaria parasites possess a telomere repeat-binding protein that shares ancestry with transcription factor IIIA |
| Q92231216 | Mammalian Annotation Database for improved annotation and functional classification of Omics datasets from less well-annotated organisms |
| Q27015020 | Measuring passive myocardial stiffness in Drosophila melanogaster to investigate diastolic dysfunction |
| Q34276930 | Mechanisms and evolutionary patterns of mammalian and avian dosage compensation |
| Q42146149 | Membrane environment imposes unique selection pressures on transmembrane domains of G protein-coupled receptors |
| Q34558058 | Mendelian and non-Mendelian regulation of gene expression in maize |
| Q41916305 | MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score. |
| Q45943697 | Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study. |
| Q27316581 | Metabolic and chaperone gene loss marks the origin of animals: evidence for Hsp104 and Hsp78 chaperones sharing mitochondrial enzymes as clients |
| Q43810520 | Metabolic flux is a determinant of the evolutionary rates of enzyme-encoding genes |
| Q33764893 | MiR-277/4989 regulate transcriptional landscape during juvenile to adult transition in the parasitic helminth Schistosoma mansoni |
| Q37270728 | Mitochondrial-nuclear interactions: compensatory evolution or variable functional constraint among vertebrate oxidative phosphorylation genes? |
| Q47138466 | MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins. |
| Q91942370 | Molecular Characteristics of Brucella Isolates Collected From Humans in Hainan Province, China |
| Q40422255 | Molecular Evolution of the Neural Crest Regulatory Network in Ray-Finned Fish. |
| Q36422268 | Molecular characterization of the translocation breakpoints in the Down syndrome mouse model Ts65Dn. |
| Q44976469 | Molecular evolution and network-level analysis of the N-glycosylation metabolic pathway across primates |
| Q58695874 | Molecular parallelism in fast-twitch muscle proteins in echolocating mammals |
| Q50026963 | Monitoring the 5-methoxycarbonylmethyl-2-thiouridine (mcm5s2U) modification in eukaryotic tRNAs via the gamma-toxin endonuclease. |
| Q37614948 | Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees |
| Q34502040 | Mouse genome database 2016. |
| Q21092720 | Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis |
| Q33945362 | MultiMSOAR 2.0: an accurate tool to identify ortholog groups among multiple genomes |
| Q59798420 | Multilevel comparative bioinformatics to investigate evolutionary relationships and specificities in gene annotations: an example for tomato and grapevine |
| Q28242198 | Multiple evidence strands suggest that there may be as few as 19,000 human protein-coding genes |
| Q35057778 | NECTAR: a database of codon-centric missense variant annotations |
| Q37466814 | NMDA receptor-dependent regulation of miRNA expression and association with Argonaute during LTP in vivo. |
| Q43218001 | Natural Selection at the Brush-Border: Adaptations to Carbohydrate Diets in Humans and Other Mammals. |
| Q33881339 | Natural selection drives the accumulation of amino acid tandem repeats in human proteins. |
| Q35753618 | Network Modules of the Cross-Species Genotype-Phenotype Map Reflect the Clinical Severity of Human Diseases |
| Q29396093 | Neuroinformatic analyses of common and distinct genetic components associated with major neuropsychiatric disorders |
| Q24656606 | Nme protein family evolutionary history, a vertebrate perspective |
| Q35622998 | No excess gene movement is detected off the avian or lepidopteran Z chromosome |
| Q33670801 | Non-homologous sex chromosomes of birds and snakes share repetitive sequences |
| Q36122410 | Novel association approach for variable number tandem repeats (VNTRs) identifies DOCK5 as a susceptibility gene for severe obesity |
| Q37563897 | Novel protein interactions with endoglin and activin receptor-like kinase 1: potential role in vascular networks |
| Q28484069 | Nrac, a novel nutritionally-regulated adipose and cardiac-enriched gene |
| Q90711716 | OHNOLOGS v2: a comprehensive resource for the genes retained from whole genome duplication in vertebrates |
| Q24610080 | OMA 2011: orthology inference among 1000 complete genomes |
| Q92999345 | OMA standalone: orthology inference among public and custom genomes and transcriptomes |
| Q90281202 | ORTHOSCOPE: An Automatic Web Tool for Phylogenetically Inferring Bilaterian Orthogroups with User-Selected Taxa |
| Q37490530 | On the origin and evolutionary history of NANOG. |
| Q28678692 | On the origins of Mendelian disease genes in man: the impact of gene duplication |
| Q35845649 | Optimizing and benchmarking de novo transcriptome sequencing: from library preparation to assembly evaluation. |
| Q34039734 | Ortho2ExpressMatrix--a web server that interprets cross-species gene expression data by gene family information |
| Q24595539 | OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs |
| Q24608310 | OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011 |
| Q64122763 | OrthoList 2: A New Comparative Genomic Analysis of Human and Genes |
| Q35007364 | OrthoList: a compendium of C. elegans genes with human orthologs |
| Q35226472 | Ortholog identification in the presence of domain architecture rearrangement |
| Q46310708 | Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inference |
| Q36102213 | Orthologs, turn-over, and remolding of tRNAs in primates and fruit flies |
| Q24635071 | Orthology prediction methods: a quality assessment using curated protein families |
| Q38599475 | Orthonome - a new pipeline for predicting high quality orthologue gene sets applicable to complete and draft genomes |
| Q36380916 | PICARA, an analytical pipeline providing probabilistic inference about a priori candidates genes underlying genome-wide association QTL in plants |
| Q38432649 | PLAZA: a comparative genomics resource to study gene and genome evolution in plants |
| Q35067830 | POGs2: a web portal to facilitate cross-species inferences about protein architecture and function in plants |
| Q28543185 | PON-P2: prediction method for fast and reliable identification of harmful variants |
| Q38123537 | PTP1B: a simple enzyme for a complex world |
| Q38137634 | PainNetworks: a web-based resource for the visualisation of pain-related genes in the context of their network associations |
| Q35054959 | Parallel evolution of chordate cis-regulatory code for development |
| Q91713316 | Patterns of gene evolution following duplications and speciations in vertebrates |
| Q28657708 | Patterns of positive selection in seven ant genomes |
| Q34341628 | Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor |
| Q34135908 | PhylDiag: identifying complex synteny blocks that include tandem duplications using phylogenetic gene trees. |
| Q41877586 | PhyleasProg: a user-oriented web server for wide evolutionary analyses. |
| Q39015302 | PhyloPro2.0: a database for the dynamic exploration of phylogenetically conserved proteins and their domain architectures across the Eukarya |
| Q28074488 | Phylogenetic Profiling for Probing the Modular Architecture of the Human Genome |
| Q92645733 | Phylogenetic Reclassification of Vertebrate Melatonin Receptors To Include Mel1d |
| Q56993997 | Phylogenetic approaches to identifying fragments of the same gene, with application to the wheat genome |
| Q34329311 | Phylogenetic patterns of emergence of new genes support a model of frequent de novo evolution |
| Q34211397 | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium |
| Q21245376 | Phylogenomic analyses support the position of turtles as the sister group of birds and crocodiles (Archosauria) |
| Q38978558 | Phylogenomic analysis of gene co-expression networks reveals the evolution of functional modules. |
| Q24612855 | PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions |
| Q34387795 | PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome |
| Q28683167 | Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient |
| Q34498367 | PhytoPath: an integrative resource for plant pathogen genomics. |
| Q37557019 | Plant Reactome: a resource for plant pathways and comparative analysis |
| Q42848317 | Polytomy refinement for the correction of dubious duplications in gene trees |
| Q34402745 | Positive selection during the evolution of the blood coagulation factors in the context of their disease-causing mutations |
| Q42063703 | Predicting physical interactions between protein complexes |
| Q34441875 | Predicting the functional effect of amino acid substitutions and indels |
| Q111629806 | Preferential retention of the slowly evolving gene in pairs of duplicates in angiosperm genomes |
| Q38711027 | Preliminary characterization of putative structural cuticular proteins in the malaria vector Anopheles sinensis. |
| Q37428410 | Presence-absence variation in A. thaliana is primarily associated with genomic signatures consistent with relaxed selective constraints |
| Q89579237 | Primary orthologs from local sequence context |
| Q50422131 | Profiling G protein-coupled receptors of Fasciola hepatica identifies orphan rhodopsins unique to phylum Platyhelminthes. |
| Q27026709 | Programmed necrosis in the cross talk of cell death and inflammation |
| Q36386280 | Properties of genes essential for mouse development |
| Q41847165 | Protein connectivity and protein complexity promotes human gene duplicability in a mutually exclusive manner |
| Q47250514 | Protein disorder in the centrosome correlates with complexity in cell types number |
| Q34421535 | Protein flexibility facilitates quaternary structure assembly and evolution |
| Q35611201 | Protein homology reveals new targets for bioactive small molecules |
| Q37430050 | Protein subcellular relocalization increases the retention of eukaryotic duplicate genes |
| Q46610724 | Proteins with Highly Evolvable Domain Architectures Are Nonessential but Highly Retained |
| Q90406514 | Putative contributions of the sex chromosome proteins SOX3 and SRY to neurodevelopmental disorders |
| Q34302143 | Quality of computationally inferred gene ontology annotations |
| Q35205182 | Quickly finding orthologs as reciprocal best hits with BLAT, LAST, and UBLAST: how much do we miss? |
| Q28661205 | Rapid diversification of FoxP2 in teleosts through gene duplication in the teleost-specific whole genome duplication event |
| Q36355017 | Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling |
| Q58702562 | Rat BodyMap transcriptomes reveal unique circular RNA features across tissue types and developmental stages |
| Q28608563 | Reactome pathway analysis to enrich biological discovery in proteomics data sets |
| Q28298042 | Reactome: a database of reactions, pathways and biological processes |
| Q47440542 | Reading m6A in the Transcriptome: m6A-Binding Proteins |
| Q42560814 | Reconciliation of gene and species trees |
| Q37216482 | Reconciliation revisited: handling multiple optima when reconciling with duplication, transfer, and loss |
| Q35801624 | Reconstructing a SuperGeneTree minimizing reconciliation |
| Q46255304 | Reconstructing protein and gene phylogenies using reconciliation and soft-clustering |
| Q33994309 | Reconstructing the architecture of the ancestral amniote genome |
| Q33766662 | Refining orthologue groups at the transcript level |
| Q57462774 | Regulation of Root Angle and Gravitropism |
| Q34382690 | Relaxed purifying selection and possibly high rate of adaptation in primate lineage-specific genes |
| Q33773781 | Representing kidney development using the gene ontology |
| Q89495217 | Resequencing 200 Flax Cultivated Accessions Identifies Candidate Genes Related to Seed Size and Weight and Reveals Signatures of Artificial Selection |
| Q35930303 | Revealing mammalian evolutionary relationships by comparative analysis of gene clusters |
| Q55290600 | Role of duplicate genes in determining the tissue-selectivity of hereditary diseases. |
| Q35541953 | Role of testis-specific gene expression in sex-chromosome evolution of Anopheles gambiae. |
| Q35560551 | STBase: one million species trees for comparative biology |
| Q42034775 | Screening for candidate genes involved in the production of mouse subventricular zone proliferative cells and an estimation of their changes in evolutionary pressure during primate evolution |
| Q28818367 | Screening lifespan-extending drugs in Caenorhabditis elegans via label propagation on drug-protein networks |
| Q28748496 | Segmental duplications in the human genome reveal details of pseudogene formation |
| Q47190138 | Selective Constraints on Coding Sequences of Nervous System Genes Are a Major Determinant of Duplicate Gene Retention in Vertebrates |
| Q51010606 | Selectivity determinants of GPCR-G-protein binding. |
| Q37661803 | Selectome update: quality control and computational improvements to a database of positive selection |
| Q55017090 | Sensing the cilium, digital capture of ciliary data for comparative genomics investigations. |
| Q35211667 | Sequence, structural and expression divergence of duplicate genes in the bovine genome |
| Q39658690 | Sequencing and analysis of an Irish human genome |
| Q22122079 | Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution |
| Q36758500 | Seventy-five genetic loci influencing the human red blood cell |
| Q28706282 | Sharing and re-use of phylogenetic trees (and associated data) to facilitate synthesis |
| Q92015555 | SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution |
| Q33633483 | Similarly strong purifying selection acts on human disease genes of all evolutionary ages |
| Q42317732 | Single-cell transcriptome analysis of fish immune cells provides insight into the evolution of vertebrate immune cell types |
| Q43258229 | Site-directed enzymatic PEGylation of the human granulocyte colony-stimulating factor |
| Q42610265 | Small homologous blocks in phytophthora genomes do not point to an ancient whole-genome duplication. |
| Q89697176 | Spatiotemporal Differentiation of Alpine Butterfly Parnassius glacialis (Papilionidae: Parnassiinae) in China: Evidence from Mitochondrial DNA and Nuclear Single Nucleotide Polymorphisms |
| Q39002203 | Spatiotemporal variation of mammalian protein complex stoichiometries. |
| Q35079606 | Specific gene-regulation networks during the pre-implantation development of the pig embryo as revealed by deep sequencing |
| Q41869319 | Speeding up all-against-all protein comparisons while maintaining sensitivity by considering subsequence-level homology |
| Q28645675 | Spider Transcriptomes Identify Ancient Large-Scale Gene Duplication Event Potentially Important in Silk Gland Evolution |
| Q44872565 | Spotted Gar and the Evolution of Innate Immune Receptors. |
| Q37473190 | Stage-Specific Transcriptome and Proteome Analyses of the Filarial Parasite Onchocerca volvulus and Its Wolbachia Endosymbiont |
| Q30002371 | Standardized benchmarking in the quest for orthologs |
| Q33613732 | State aggregation for fast likelihood computations in molecular evolution |
| Q35906459 | Structural and functional annotation of the MADS-box transcription factor family in grapevine |
| Q34724017 | Structural and functional annotation of the porcine immunome |
| Q28742243 | Structural and functional relationships between photoreceptor tetraspanins and other superfamily members |
| Q34472565 | Structural divergence in vertebrate phylogeny of a duplicated prototype galectin |
| Q24308820 | Structure of human Sp140 PHD finger: an atypical fold interacting with Pin1 |
| Q36273166 | Susceptibility to type 2 diabetes may be modulated by haplotypes in G6PC2, a target of positive selection. |
| Q42724602 | SwissTargetPrediction: a web server for target prediction of bioactive small molecules |
| Q89982979 | Sympatric speciation of wild emmer wheat driven by ecology and chromosomal rearrangements |
| Q38823713 | SynLethDB: synthetic lethality database toward discovery of selective and sensitive anticancer drug targets |
| Q28751512 | Synorth: exploring the evolution of synteny and long-range regulatory interactions in vertebrate genomes |
| Q21145302 | Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data |
| Q49178768 | Systems Analysis of the Liver Transcriptome in Adult Male Zebrafish Exposed to the Plasticizer (2-Ethylhexyl) Phthalate (DEHP). |
| Q92590360 | TaWAK6 encoding wall-associated kinase is involved in wheat resistance to leaf rust similar to adult plant resistance |
| Q33575868 | TargetOrtho: a phylogenetic footprinting tool to identify transcription factor targets |
| Q21145323 | Testing the ortholog conjecture with comparative functional genomic data from mammals |
| Q38631170 | The Adaptive Evolution Database (TAED): A New Release of a Database of Phylogenetically Indexed Gene Families from Chordates. |
| Q22066274 | The Burmese python genome reveals the molecular basis for extreme adaptation in snakes |
| Q35100720 | The G protein α subunit Gαs is a tumor suppressor in Sonic hedgehog-driven medulloblastoma |
| Q35253738 | The GOA database: gene Ontology annotation updates for 2015 |
| Q35720244 | The Identification of Circulating MiRNA in Bovine Serum and Their Potential as Novel Biomarkers of Early Mycobacterium avium subsp paratuberculosis Infection |
| Q46268168 | The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces. |
| Q37608193 | The R-spondin/Lgr5/Rnf43 module: regulator of Wnt signal strength |
| Q42710675 | The Role of Retrotransposons in Gene Family Expansions in the Human and Mouse Genomes |
| Q24299186 | The STARD9/Kif16a kinesin associates with mitotic microtubules and regulates spindle pole assembly |
| Q37257672 | The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate genome |
| Q28596345 | The Transcriptomic Evolution of Mammalian Pregnancy: Gene Expression Innovations in Endometrial Stromal Fibroblasts |
| Q35630729 | The UniProt-GO Annotation database in 2011. |
| Q28260701 | The clustering of functionally related genes contributes to CNV-mediated disease |
| Q104486466 | The de novo genome assembly of Tapiscia sinensis and the transcriptomic and developmental bases of androdioecy |
| Q42681725 | The domain structure and distribution of Alu elements in long noncoding RNAs and mRNAs |
| Q28600967 | The drug target genes show higher evolutionary conservation than non-target genes |
| Q22122074 | The duck genome and transcriptome provide insight into an avian influenza virus reservoir species |
| Q31108150 | The duplicated genes database: identification and functional annotation of co-localised duplicated genes across genomes |
| Q28248746 | The early expansion and evolutionary dynamics of POU class genes |
| Q50445428 | The evolution and function of protein tandem repeats in plants. |
| Q43134967 | The evolution and functional diversification of the deubiquitinating enzyme superfamily |
| Q38661582 | The evolution of duplicate gene expression in mammalian organs |
| Q29617170 | The evolution of gene expression levels in mammalian organs |
| Q50738717 | The evolution of lineage-specific clusters of single nucleotide substitutions in the human genome. |
| Q34400081 | The evolution of lncRNA repertoires and expression patterns in tetrapods |
| Q35826230 | The evolutionary fate of alternatively spliced homologous exons after gene duplication |
| Q35095539 | The evolutionary panorama of organ-specifically expressed or repressed orthologous genes in nine vertebrate species |
| Q35112922 | The functional consequences of variation in transcription factor binding. |
| Q37643713 | The genome of Onchocerca volvulus, agent of river blindness |
| Q64109196 | The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
| Q21146634 | The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion |
| Q64070855 | The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition |
| Q35909943 | The genomic basis of parasitism in the Strongyloides clade of nematodes |
| Q34986211 | The grapevine gene nomenclature system |
| Q34342479 | The hourglass and the early conservation models--co-existing patterns of developmental constraints in vertebrates |
| Q21129222 | The iPlant Collaborative: Cyberinfrastructure for Plant Biology |
| Q34102856 | The impact of focused Gene Ontology curation of specific mammalian systems |
| Q30431966 | The impact of gene expression regulation on evolution of extracellular signaling pathways |
| Q34431226 | The inference of gene trees with species trees |
| Q37237987 | The integrated landscape of driver genomic alterations in glioblastoma |
| Q47550309 | The invasive MED/Q Bemisia tabaci genome: a tale of gene loss and gene gain. |
| Q40253098 | The link between orthology relations and gene trees: a correction perspective |
| Q37076988 | The mRNA-bound proteome of the early fly embryo |
| Q40808577 | The mammalian complement system as an epitome of host-pathogen genetic conflicts. |
| Q33517995 | The other side of comparative genomics: genes with no orthologs between the cow and other mammalian species |
| Q36611523 | The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies |
| Q36640777 | The plant ontology as a tool for comparative plant anatomy and genomic analyses |
| Q34084950 | The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species |
| Q34983597 | The relationship between gene isoform multiplicity, number of exons and protein divergence |
| Q28601481 | The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons |
| Q100558717 | The structural variation landscape in 492 Atlantic salmon genomes |
| Q90448937 | The sugarcane mitochondrial genome: assembly, phylogenetics and transcriptomics |
| Q34622011 | The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels |
| Q50422616 | The unique features of proteins depicting the chicken amniotic fluid. |
| Q35030401 | The vertebrate ancestral repertoire of visual opsins, transducin alpha subunits and oxytocin/vasopressin receptors was established by duplication of their shared genomic region in the two rounds of early vertebrate genome duplications |
| Q41757244 | The vertebrate muscle-specific RING finger protein family includes MuRF4--a novel, conserved E3-ubiquitin ligase. |
| Q22065285 | The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage. |
| Q64259127 | The widespread increase in inter-individual variability of gene expression in the human brain with age |
| Q29616593 | The zebrafish reference genome sequence and its relationship to the human genome |
| Q58695408 | Time-Series Analysis of Tumorigenesis in a Murine Skin Carcinogenesis Model |
| Q30431285 | Time-dependent gene expression analysis of the developing superior olivary complex |
| Q36234551 | Tissue-Specificity of Gene Expression Diverges Slowly between Orthologs, and Rapidly between Paralogs. |
| Q33575525 | Touring Ensembl: a practical guide to genome browsing |
| Q38446542 | Towards Consensus Gene Ages |
| Q33748950 | Transcriptional response to hepatitis C virus infection and interferon-alpha treatment in the human liver |
| Q37218555 | Transcriptome analyses of the Dof-like gene family in grapevine reveal its involvement in berry, flower and seed development |
| Q36317537 | Transcriptome analysis of pancreatic cells across distant species highlights novel important regulator genes |
| Q92515510 | Transcriptome-Wide Patterns of the Genetic and Expression Variations in Two Sympatric Schizothoracine Fishes in a Tibetan Plateau Glacier Lake |
| Q33528261 | Translog, a web browser for studying the expression divergence of homologous genes |
| Q37739557 | Tree shrew database (TreeshrewDB): a genomic knowledge base for the Chinese tree shrew. |
| Q28660718 | TreeFam v9: a new website, more species and orthology-on-the-fly |
| Q36479265 | TreeFix: statistically informed gene tree error correction using species trees |
| Q34994742 | Triticeae resources in Ensembl Plants |
| Q27334789 | USP2-45 Is a Circadian Clock Output Effector Regulating Calcium Absorption at the Post-Translational Level |
| Q33879784 | Ultra-fast sequence clustering from similarity networks with SiLiX. |
| Q35207816 | Uncovering adaptive evolution in the human lineage. |
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