scholarly article | Q13442814 |
P356 | DOI | 10.1126/SCIENCE.1250091 |
P698 | PubMed publication ID | 25035498 |
P50 | author | International Wheat Genome Sequencing Consortium | Q61757588 |
Torgeir R Hvidsten | Q42670779 | ||
P2093 | author name string | Matthias Pfeifer | |
Bujie Zhan | |||
Odd-Arne Olsen | |||
Simen R Sandve | |||
Klaus F X Mayer | |||
Karl G Kugler | |||
Heidi Rudi | |||
P2860 | cites work | Geometric interpretation of gene coexpression network analysis | Q21145373 |
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 | ||
WGCNA: an R package for weighted correlation network analysis | Q21284194 | ||
The B73 Maize Genome: Complexity, Diversity, and Dynamics | Q22065899 | ||
The advantages and disadvantages of being polyploid | Q22122019 | ||
Mapping and quantifying mammalian transcriptomes by RNA-Seq | Q22122035 | ||
Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation | Q22122140 | ||
Genome sequencing and analysis of the model grass Brachypodium distachyon | Q22122196 | ||
The Sorghum bicolor genome and the diversification of grasses | Q22122216 | ||
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana | Q22122387 | ||
Gene ontology: tool for the unification of biology | Q23781406 | ||
Cytoscape: a software environment for integrated models of biomolecular interaction networks | Q24515682 | ||
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation | Q24627354 | ||
TopHat: discovering splice junctions with RNA-Seq | Q24655505 | ||
Jalview Version 2--a multiple sequence alignment editor and analysis workbench | Q24655519 | ||
Basic local alignment search tool | Q25938991 | ||
Clustal W and Clustal X version 2.0 | Q27860517 | ||
PAML 4: phylogenetic analysis by maximum likelihood | Q27860834 | ||
OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes | Q27860860 | ||
A genomic perspective on protein families | Q27860913 | ||
Identification and characterization of shared duplications between rice and wheat provide new insight into grass genome evolution | Q28755477 | ||
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome | Q29029314 | ||
REVIGO summarizes and visualizes long lists of gene ontology terms | Q29614817 | ||
Using GOstats to test gene lists for GO term association | Q29615168 | ||
The map-based sequence of the rice genome | Q29617329 | ||
Maize endosperm secretes a novel antifungal protein into adjacent maternal tissue | Q30988188 | ||
Analysis of expressed sequence tag loci on wheat chromosome group 4 | Q33208488 | ||
Developmental changes in the metabolic protein profiles of wheat endosperm | Q33213403 | ||
Gene network interconnectedness and the generalized topological overlap measure | Q33270231 | ||
Homoeolog-specific transcriptional bias in allopolyploid wheat | Q33694957 | ||
Cereal seed storage proteins: structures, properties and role in grain utilization. | Q33958054 | ||
Puroindolines: the molecular genetic basis of wheat grain hardness | Q34630907 | ||
Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. | Q34714933 | ||
Deciphering the complexities of the wheat flour proteome using quantitative two-dimensional electrophoresis, three proteases and tandem mass spectrometry | Q35614520 | ||
Nuclear endosperm development in cereals and Arabidopsis thaliana | Q35686449 | ||
Comprehensive developmental profiles of gene activity in regions and subregions of the Arabidopsis seed. | Q36582999 | ||
The wheat omega-gliadin genes: structure and EST analysis | Q37238677 | ||
The 'inner circle' of the cereal genomes | Q37354535 | ||
Genomic asymmetry in allopolyploid plants: wheat as a model. | Q38031812 | ||
A 3,000-loci transcription map of chromosome 3B unravels the structural and functional features of gene islands in hexaploid wheat | Q38500193 | ||
Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed | Q38520948 | ||
Cell walls of developing wheat starchy endosperm: comparison of composition and RNA-Seq transcriptome | Q42772939 | ||
Unlocking the barley genome by chromosomal and comparative genomics | Q43472103 | ||
Gene expression in the developing aleurone and starchy endosperm of wheat | Q43496508 | ||
The gene space in wheat: the complete γ-gliadin gene family from the wheat cultivar Chinese Spring | Q44634783 | ||
Genetic and epigenetic alteration among three homoeologous genes of a class E MADS box gene in hexaploid wheat. | Q45994144 | ||
Barley grain maturation and germination: metabolic pathway and regulatory network commonalities and differences highlighted by new MapMan/PageMan profiling tools | Q46748372 | ||
A cluster of Arabidopsis genes with a coordinate response to an environmental stimulus | Q47372768 | ||
Gene content and virtual gene order of barley chromosome 1H. | Q48068465 | ||
Molecular basis of evolutionary events that shaped the hardness locus in diploid and polyploid wheat species (Triticum and Aegilops). | Q48148034 | ||
Pvclust: an R package for assessing the uncertainty in hierarchical clustering. | Q51630850 | ||
Nucleotide polymorphism in the wheat transcriptional activator Spa influences its pattern of expression and has pleiotropic effects on grain protein composition, dough viscoelasticity, and grain hardness. | Q51924479 | ||
Systematic spatial analysis of gene expression during wheat caryopsis development. | Q52044870 | ||
Silhouettes: A graphical aid to the interpretation and validation of cluster analysis | Q57380611 | ||
Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content | Q59203370 | ||
P433 | issue | 6194 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | transcriptome | Q252857 |
wheat | Q15645384 | ||
P304 | page(s) | 1250091 | |
P577 | publication date | 2014-07-01 | |
P1433 | published in | Science | Q192864 |
P1476 | title | Genome interplay in the grain transcriptome of hexaploid bread wheat | |
P478 | volume | 345 |
Q57173452 | : A Monocot Grass Model Genus for Plant Biology |
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