WGCNA: an R package for weighted correlation network analysis (scientific article)

cites work (P2860)

Q36191266	"Good enough solutions" and the genetics of complex diseases
Q34472529	"Out of pollen" hypothesis for origin of new genes in flowering plants: study from Arabidopsis thaliana
Q64124756	-Expressing Cancer-Associated Fibroblasts Mediate Metabolic Reprogramming in Human Lung Adenocarcinoma
Q31136593	-Omic and Electronic Health Record Big Data Analytics for Precision Medicine
Q64056306	-Omics biomarker identification pipeline for translational medicine
Q90164928	17β-estradiol alters mRNA co-expression after murine muscle injury and mild hypobaria
Q31033467	3CPET: finding co-factor complexes from ChIA-PET data using a hierarchical Dirichlet process
Q41704790	5-hydroxymethylcytosine is highly dynamic across human fetal brain development
Q90152154	A 6-Gene Risk Signature Predicts Survival of Glioblastoma Multiforme
Q92208787	A 9‑lncRNA risk score system for predicting the prognosis of patients with hepatitis B virus‑positive hepatocellular carcinoma
Q91604663	A Bayesian gene network reveals insight into the JAK-STAT pathway in systemic lupus erythematosus
Q90132988	A Cell- and Tissue-Specific Weakness of the Protein Homeostasis System Underlies Brain Vulnerability to Protein Aggregation
Q51731320	A Chimeric Antibody against ACKR3/CXCR7 in Combination with TMZ Activates Immune Responses and Extends Survival in Mouse GBM Models.
Q92222320	A Circulating miRNA-Based Scoring System Established by WGCNA to Predict Colon Cancer
Q64081212	A Co-expression Analysis of the Placental Transcriptome in Association With Maternal Pre-pregnancy BMI and Newborn Birth Weight
Q31161072	A Combined PLS and Negative Binomial Regression Model for Inferring Association Networks from Next-generation Sequencing Count Data
Q91938966	A Combined Transcriptomic and Genomic Analysis Identifies a Gene Signature Associated With the Response to Anti-TNF Therapy in Rheumatoid Arthritis
Q89657305	A Comparative Analysis of Single-Cell Transcriptome Identifies Reprogramming Driver Factors for Efficiency Improvement
Q91942533	A Comparison of Co-expression Networks in Silk Gland Reveals the Causes of Silk Yield Increase During Silkworm Domestication
Q58764281	A Comprehensive Survey of Immune Cytolytic Activity-Associated Gene Co-Expression Networks across 17 Tumor and Normal Tissue Types
Q89977294	A Comprehensive Transcriptomics Analysis Reveals Long Non-Coding RNA to be Involved in the Key Metabolic Pathway in Response to Waterlogging Stress in Maize
Q58746374	A Dynamic Co-expression Map of Early Inflorescence Development in Provides a Resource for Gene Discovery and Comparative Genomics
Q92888975	A Further Analysis and Commentary on: Profiling Changes in Cortical Astroglial Cells Following Chronic Stress
Q47756551	A Generalized Approach for Measuring Relationships Among Genes.
Q95269627	A Gleason score-related outcome model for human prostate cancer: a comprehensive study based on weighted gene co-expression network analysis
Q55457261	A Glial Signature and Wnt7 Signaling Regulate Glioma-Vascular Interactions and Tumor Microenvironment.
Q92316686	A High Protein Model Alters the Endometrial Transcriptome of Mares
Q55526068	A Low Glycaemic Index Diet in Pregnancy Induces DNA Methylation Variation in Blood of Newborns: Results from the ROLO Randomised Controlled Trial.
Q39721512	A Machine Learning Approach to Predict Gene Regulatory Networks in Seed Development in Arabidopsis
Q64112404	A Machine Learning Classifier for Assigning Individual Patients with Systemic Sclerosis to Intrinsic Molecular Subsets
Q61810296	A Microglial Signature Directing Human Aging and Neurodegeneration-Related Gene Networks
Q92444619	A Model of Hormonal Regulation of Stamen Abortion during Pre-Meiosis of Litsea cubeba
Q51252442	A Multi-network Approach Identifies Protein-Specific Co-expression in Asymptomatic and Symptomatic Alzheimer's Disease.
Q92736101	A Network Module for the Perseus Software for Computational Proteomics Facilitates Proteome Interaction Graph Analysis
Q62717980	A Network-Based Meta-analysis Strategy for the Selection of Potential Gene Modules in Type 2 Diabetes
Q46309623	A New Diagnostic Resource for Ceratitis capitata Strain Identification Based on QTL Mapping
Q91106238	A New Strategy for Identifying Mechanisms of Drug-drug Interaction Using Transcriptome Analysis: Compound Kushen Injection as a Proof of Principle
Q92152810	A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
Q98771303	A Novel Immune-Related Competing Endogenous RNA Network Predicts Prognosis of Acute Myeloid Leukemia
Q89820822	A Novel Method to Efficiently Highlight Nonlinearly Expressed Genes
Q33747402	A Path to Implement Precision Child Health Cardiovascular Medicine
Q57466154	A Prognostic 5-lncRNA Expression Signature for Head and Neck Squamous Cell Carcinoma
Q92403994	A Risk Classification System With Five-Gene for Survival Prediction of Glioblastoma Patients
Q52629098	A Risk Stratification Model for Lung Cancer Based on Gene Coexpression Network and Deep Learning.
Q36569846	A Robust Single Primate Neuroepithelial Cell Clonal Expansion System for Neural Tube Development and Disease Studies
Q94502754	A Signaling Pathway to Mediate the Combined Immunomodulation of Acetylcholine and Enkephalin in Oyster Crassostrea gigas
Q92215198	A Statistical Test for Differential Network Analysis Based on Inference of Gaussian Graphical Model
Q53069547	A Strategy for Discovery of Endocrine Interactions with Application to Whole-Body Metabolism.
Q35944207	A Systematic Investigation into Aging Related Genes in Brain and Their Relationship with Alzheimer's Disease
Q37550746	A Systems Approach Implicates a Brain Mitochondrial Oxidative Homeostasis Co-expression Network in Genetic Vulnerability to Alcohol Withdrawal.
Q38597918	A Systems Biology Approach to Investigating Sex Differences in Cardiac Hypertrophy.
Q55091422	A Systems Biology Study in Tomato Fruit Reveals Correlations between the Ascorbate Pool and Genes Involved in Ribosome Biogenesis, Translation, and the Heat-Shock Response.
Q33687790	A Systems Genetics Approach Identified GPD1L and its Molecular Mechanism for Obesity in Human Adipose Tissue
Q48111550	A Systems Genetics Approach Identifies Gene Regulatory Networks Associated with Fatty Acid Composition in Brassica rapa Seed.
Q40049495	A Systems Vaccinology Approach Reveals Temporal Transcriptomic Changes of Immune Responses to the Yellow Fever 17D Vaccine.
Q37087410	A Systems View of the Differences between APOE ε4 Carriers and Non-carriers in Alzheimer's Disease
Q38973189	A Systems-Level Analysis of the Peripheral Nerve Intrinsic Axonal Growth Program
Q92219804	A TESTING BASED APPROACH TO THE DISCOVERY OF DIFFERENTIALLY CORRELATED VARIABLE SETS
Q96576691	A Transcriptome Analysis Reveals that Hepatic Glycolysis and Lipid Synthesis Are Negatively Associated with Feed Efficiency in DLY Pigs
Q38604266	A Weighted SNP Correlation Network Method for Estimating Polygenic Risk Scores
Q50057505	A broad investigation of the HBV-mediated changes to primary hepatocyte physiology reveals HBV significantly alters metabolic pathways.
Q93070840	A chromosome-scale genome assembly and dense genetic map for Xenopus tropicalis
Q48178199	A chronic low dose of Δ9-tetrahydrocannabinol (THC) restores cognitive function in old mice
Q92104427	A co-expression network for differentially expressed genes in bladder cancer and a risk score model for predicting survival
Q34446889	A common gene expression signature in Huntington's disease patient brain regions
Q89530655	A comparative gene co-expression analysis using self-organizing maps on two congener filmy ferns identifies specific desiccation tolerance mechanisms associated to their microhabitat preference
Q89014726	A comparative study of the genetic components of three subcategories of autism spectrum disorder
Q48353795	A comparison of honeybee (Apis mellifera) queen, worker and drone larvae by RNA-Seq.
Q47205541	A complex network approach reveals a pivotal substructure of genes linked to schizophrenia
Q42515905	A composite network of conserved and tissue specific gene interactions reveals possible genetic interactions in glioma.
Q30374709	A comprehensive collection of systems biology data characterizing the host response to viral infection.
Q55298516	A comprehensive evaluation of module detection methods for gene expression data.
Q91990053	A comprehensive expression analysis of the expansin gene family in potato (Solanum tuberosum) discloses stress-responsive expansin-like B genes for drought and heat tolerances
Q64110665	A comprehensive reference transcriptome resource for the Iberian ribbed newt Pleurodeles waltl, an emerging model for developmental and regeneration biology
Q37666104	A comprehensive transcriptional map of primate brain development.
Q55139050	A computational framework for complex disease stratification from multiple large-scale datasets.
Q58052580	A computational framework to integrate high-throughput ‘-omics’ datasets for the identification of potential mechanistic links
Q41063962	A cross-species approach to identify transcriptional regulators exemplified for Dnajc22 and Hnf4a.
Q37005538	A cross-species bi-clustering approach to identifying conserved co-regulated genes
Q36311348	A data-driven approach links microglia to pathology and prognosis in amyotrophic lateral sclerosis
Q64052248	A deficiency in SUMOylation activity disrupts multiple pathways leading to neural tube and heart defects in Xenopus embryos
Q89231604	A descriptive marker gene approach to single-cell pseudotime inference
Q91923183	A developmental landscape of 3D-cultured human pre-gastrulation embryos
Q44747815	A developmental transcriptional network for maize defines coexpression modules
Q91624884	A differential host response to viral infection defines a subset of earlier-onset diverticulitis patients
Q58544863	A dynamic transcriptomic atlas of cytokine induced killer cells
Q58078773	A fully automated pipeline for quantitative genotype calling from next generation sequencing data in autopolyploids
Q35847544	A functional genomic model for predicting prognosis in idiopathic pulmonary fibrosis.
Q37321625	A functional genomics screen in planarians reveals regulators of whole-brain regeneration.
Q57077038	A gene co-expression module implicating the mitochondrial electron transport chain is associated with long-term response to lithium treatment in bipolar affective disorder
Q34326175	A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes
Q91885983	A gene co-expression network-based analysis of multiple brain tissues reveals novel genes and molecular pathways underlying major depression
Q60911940	A gene expression map of shoot domains reveals regulatory mechanisms
Q91841793	A gene expression network analysis of the pancreatic islets from lean and obese mice identifies complement 1q like-3 secreted protein as a regulator of β-cell function
Q61444214	A gene expression signature in developing Purkinje cells predicts autism and intellectual disability co-morbidity status
Q99350165	A gene prioritization method based on a swine multi-omics knowledgebase and a deep learning model
Q92289119	A genetic characterization of Korean waxy maize (Zea mays L.) landraces having flowering time variation by RNA sequencing
Q90754215	A genome-wide assessment of the ancestral neural crest gene regulatory network
Q45985467	A high-quality carrot genome assembly provides new insights into carotenoid accumulation and asterid genome evolution.
Q98613233	A high-quality sponge gourd (Luffa cylindrica) genome
Q50065994	A histone deacetylase 3-dependent pathway delimits peripheral myelin growth and functional regeneration.
Q47358966	A loss-of-function homozygous mutation in DDX59 implicates a conserved DEAD-box RNA helicase in nervous system development and function.
Q36111297	A matrix rank based concordance index for evaluating and detecting conditional specific co-expressed gene modules
Q101574114	A methodology for predicting tissue-specific metabolic roles of receptors applied to subcutaneous adipose
Q64086087	A modular analysis of microglia gene expression, insights into the aged phenotype
Q21559533	A modular organization of the human intestinal mucosal microbiota and its association with inflammatory bowel disease
Q55301091	A modular transcriptional signature identifies phenotypic heterogeneity of human tuberculosis infection.
Q46523851	A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates
Q45972129	A molecular morphometric approach to diabetic kidney disease can link structure to function and outcome.
Q57740664	A molecular network of the aging human brain provides insights into the pathology and cognitive decline of Alzheimer’s disease
Q89848830	A multi-omics investigation of the molecular characteristics and classification of six metabolic syndrome relevant diseases
Q43615149	A multidimensional blood stimulation assay reveals immune alterations underlying systemic juvenile idiopathic arthritis
Q34646243	A network module-based method for identifying cancer prognostic signatures
Q57125214	A network-based signature to predict the survival of non-smoking lung adenocarcinoma
Q92332224	A new method for mining information of co-expression network based on multi-cancers integrated data
Q92564796	A nomogram based on 9-lncRNAs signature for improving prognostic prediction of clear cell renal cell carcinoma
Q64107493	A novel 4-gene signature for overall survival prediction in lung adenocarcinoma patients with lymph node metastasis
Q24336923	A novel IFITM5 mutation in severe atypical osteogenesis imperfecta type VI impairs osteoblast production of pigment epithelium-derived factor
Q41059186	A novel approach to select differential pathways associated with hypertrophic cardiomyopathy based on gene co‑expression analysis
Q35969738	A novel comparative pattern analysis approach identifies chronic alcohol mediated dysregulation of transcriptomic dynamics during liver regeneration
Q45248956	A novel microglial subset plays a key role in myelinogenesis in developing brain
Q36436047	A novel regulatory factor recruits the nucleosome remodeling complex to wingless integrated (Wnt) signaling gene promoters in mouse embryonic stem cells
Q64927209	A novel risk score system for assessment of ovarian cancer based on co-expression network analysis and expression level of five lncRNAs.
Q47294911	A polygenic score for schizophrenia predicts glycemic control
Q54956745	A powerful nonparametric method for detecting differentially co-expressed genes: distance correlation screening and edge-count test.
Q35921232	A powerful score-based statistical test for group difference in weighted biological networks
Q37320231	A powerful weighted statistic for detecting group differences of directed biological networks.
Q26859072	A progressive mouse model of Parkinson's disease: the Thy1-aSyn ("Line 61") mice
Q98394657	A proteogenomic profile of early lung adenocarcinomas by protein co-expression network and genomic alteration analysis
Q47344945	A proteomic network approach across the ALS-FTD disease spectrum resolves clinical phenotypes and genetic vulnerability in human brain.
Q34775670	A quantitative framework to evaluate modeling of cortical development by neural stem cells
Q91621630	A road map for understanding molecular and genetic determinants of osteoporosis
Q50104991	A roadmap towards personalized immunology.
Q98726294	A robust 11-genes prognostic model can predict overall survival in bladder cancer patients based on five cohorts
Q35752837	A robust blood gene expression-based prognostic model for castration-resistant prostate cancer
Q89998221	A robust gene regulatory network inference method base on Kalman filter and linear regression
Q36265761	A scalable algorithm for structure identification of complex gene regulatory network from temporal expression data
Q92705207	A seed germination transcriptomic study contrasting two soybean genotypes that differ in terms of their tolerance to the deleterious impacts of elevated temperatures during seed fill
Q93009389	A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening
Q49789088	A set of regulatory genes co-expressed in embryonic human brain is implicated in disrupted speech development.
Q64275953	A single-cell transcriptomic atlas of the developing chicken limb
Q60300534	A six-mRNA prognostic model to predict survival in head and neck squamous cell carcinoma
Q93067792	A sorghum NAC gene is associated with variation in biomass properties and yield potential
Q100558763	A strategy to incorporate prior knowledge into correlation network cutoff selection
Q47236511	A study on the predictability of acute lymphoblastic leukaemia response to treatment using a hybrid oncosimulator.
Q57061680	A survey of inter-individual variation in DNA methylation identifies environmentally responsive co-regulated networks of epigenetic variation in the human genome
Q37600716	A system biology approach to identify regulatory pathways underlying the neuroendocrine control of female puberty in rats and nonhuman primates
Q30940449	A system level analysis of gastric cancer across tumor stages with RNA-seq data
Q34986584	A system-level model for the microbial regulatory genome
Q56879988	A systematic performance evaluation of clustering methods for single-cell RNA-seq data
Q36670740	A systematic study on drug-response associated genes using baseline gene expressions of the Cancer Cell Line Encyclopedia
Q90667792	A systematic survey of centrality measures for protein-protein interaction networks
Q39249330	A systems approach to a spatio-temporal understanding of the drought stress response in maize.
Q38930224	A systems approach to renal inflammation in SLE.
Q41189343	A systems biology approach to defining regulatory mechanisms for cartilage and tendon cell phenotypes.
Q37119481	A systems biology framework identifies molecular underpinnings of coronary heart disease
Q35693517	A systems genetic analysis of high density lipoprotein metabolism and network preservation across mouse models
Q44234183	A systems genetics approach identifies Trp53inp2 as a link between cardiomyocyte glucose utilization and hypertrophic response
Q33502703	A systems genetics approach implicates USF1, FADS3, and other causal candidate genes for familial combined hyperlipidemia
Q35967994	A temperature-sensitive allele of a putative mRNA splicing helicase down-regulates many cell wall genes and causes radial swelling in Arabidopsis thaliana.
Q90293258	A three-long non-coding RNA-expression-based risk score system can better predict both overall and recurrence-free survival in patients with small hepatocellular carcinoma
Q89868771	A transcriptional co-expression network-based approach to identify prognostic biomarkers in gastric carcinoma
Q38783459	A transcriptome-based assessment of the astrocytic dystrophin-associated complex in the developing human brain
Q36858433	A translational systems biology approach in both animals and humans identifies a functionally related module of accumbal genes involved in the regulation of reward processing and binge drinking in males.
Q91767428	A twenty gene-based gene set variation score reflects the pathological progression from cirrhosis to hepatocellular carcinoma
Q38437411	A whole-blood transcriptome meta-analysis identifies gene expression signatures of cigarette smoking
Q57476484	ABI3 and PLCG2 missense variants as risk factors for neurodegenerative diseases in Caucasians and African Americans
Q40968548	ALS disrupts spinal motor neuron maturation and aging pathways within gene co-expression networks
Q56928076	ANIMA: Association network integration for multiscale analysis
Q52579365	ANLN functions as a key candidate gene in cervical cancer as determined by integrated bioinformatic analysis.
Q89555380	APOE genotype regulates pathology and disease progression in synucleinopathy
Q92332883	APOE2 orchestrated differences in transcriptomic and lipidomic profiles of postmortem AD brain
Q64888205	APOE4 Causes Widespread Molecular and Cellular Alterations Associated with Alzheimer's Disease Phenotypes in Human iPSC-Derived Brain Cell Types.
Q101165878	APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer's disease patient iPSC-derived cerebral organoids
Q90622976	Aberrant cell migration contributes to defective airway epithelial repair in childhood wheeze
Q37619800	Aberrant transcriptional networks in step-wise neurogenesis of paroxysmal kinesigenic dyskinesia-induced pluripotent stem cells
Q99616762	Abiotic and past climatic conditions drive protein abundance variation among natural populations of the caddisfly Crunoecia irrorata
Q35217255	Acceleration of age-associated methylation patterns in HIV-1-infected adults
Q92688879	Accumulation of Cytoplasmic DNA Due to ATM Deficiency Activates the Microglial Viral Response System with Neurotoxic Consequences
Q92215107	Activity-dependent changes in synaptic protein complex composition are consistent in different detergents despite differential solubility
Q36508150	Activity-dependent protein dynamics define interconnected cores of co-regulated postsynaptic proteins
Q56408181	Adaptation of Plasmodium falciparum to its transmission environment
Q34454894	Addiction and reward-related genes show altered expression in the postpartum nucleus accumbens
Q64053517	Addressing confounding artifacts in reconstruction of gene co-expression networks
Q34502920	Adipose co-expression networks across Finns and Mexicans identify novel triglyceride-associated genes
Q27311570	Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
Q37088784	Adult pallium transcriptomes surprise in not reflecting predicted homologies across diverse chicken and mouse pallial sectors.
Q27013028	Advanced Applications of RNA Sequencing and Challenges
Q52716413	Advances in Transcriptomics: Investigating Cardiovascular Disease at Unprecedented Resolution.
Q52370685	Advances in the Genetics of Hypertension: The Effect of Rare Variants.
Q38816605	Advances in the genetics of schizophrenia: toward a network and pathway view for drug discovery
Q92825205	Adventitial Cell Atlas of wt (Wild Type) and ApoE (Apolipoprotein E)-Deficient Mice Defined by Single-Cell RNA Sequencing
Q34397077	Aerobic glycolysis in the human brain is associated with development and neotenous gene expression
Q58114491	Age- and Genotype-Specific Effects of the Angiotensin-Converting Enzyme Inhibitor Lisinopril on Mitochondrial and Metabolic Parameters in
Q34487421	Age-associated changes in gene expression in human brain and isolated neurons
Q91955736	Age-related transcriptional modules and TF-miRNA-mRNA interactions in neonatal and infant human thymus
Q90702227	Aggregatibacter actinomycetemcomitans colonization and persistence in a primate model
Q33741734	Aging effects on DNA methylation modules in human brain and blood tissue
Q90538157	Aging induces aberrant state transition kinetics in murine muscle stem cells
Q36223632	Aging-like changes in the transcriptome of irradiated microglia
Q64106078	Alcohol-responsive genes identified in human iPSC-derived neural cultures
Q38976392	Algorithms for modeling global and context-specific functional relationship networks.
Q37637057	All-trans retinoic acid-triggered antimicrobial activity against Mycobacterium tuberculosis is dependent on NPC2.
Q30596522	Alteration in basal and depolarization induced transcriptional network in iPSC derived neurons from Timothy syndrome.
Q37286652	Alterations in Serum Polyunsaturated Fatty Acids and Eicosanoids in Patients with Mild to Moderate Chronic Obstructive Pulmonary Disease (COPD)
Q64086174	Alterations in the gut microbiome and metabolism with coronary artery disease severity
Q36104675	Alterations of a Cellular Cholesterol Metabolism Network Are a Molecular Feature of Obesity-Related Type 2 Diabetes and Cardiovascular Disease
Q36432391	Altered expression of mRNA profiles in blood of early-onset schizophrenia
Q30382204	Altered glutamate protein co-expression network topology linked to spine loss in the auditory cortex of schizophrenia.
Q64085818	Aluminum Responsive Genes in Flax ( L.)
Q48444509	AlzBase: an Integrative Database for Gene Dysregulation in Alzheimer's Disease.
Q90559265	Alzheimer's Risk Factors Age, APOE Genotype, and Sex Drive Distinct Molecular Pathways
Q90317115	Amino acid levels determine metabolism and CYP450 function of hepatocytes and hepatoma cell lines
Q59069522	Amphioxus functional genomics and the origins of vertebrate gene regulation
Q39136356	Amylin Treatment Reduces Neuroinflammation and Ameliorates Abnormal Patterns of Gene Expression in the Cerebral Cortex of an Alzheimer's Disease Mouse Model.
Q46002406	Amyloid Accumulation Drives Proteome-wide Alterations in Mouse Models of Alzheimer's Disease-like Pathology.
Q100954884	An 18-gene signature based on glucose metabolism and DNA methylation improves prognostic prediction for urinary bladder cancer
Q47308552	An ALOX12-12-HETE-GPR31 signaling axis is a key mediator of hepatic ischemia-reperfusion injury
Q57046166	An Improved Method for Prediction of Cancer Prognosis by Network Learning
Q92971359	An Inflammatory Landscape for Preoperative Neurologic Deficits in Glioblastoma
Q89495309	An Integrated Model Based on a Six-Gene Signature Predicts Overall Survival in Patients With Hepatocellular Carcinoma
Q55294557	An Integration of Genome-Wide Association Study and Gene Co-expression Network Analysis Identifies Candidate Genes of Stem Lodging-Related Traits in Brassica napus.
Q36449739	An Integrative Genomic Study Implicates the Postsynaptic Density in the Pathogenesis of Bipolar Disorder
Q36058683	An Integrative Transcriptomic Analysis for Identifying Novel Target Genes Corresponding to Severity Spectrum in Spinal Muscular Atrophy
Q89122754	An Integrative Transcriptomic and Metabolomic Study of Lung Function in Children With Asthma
Q64078451	An Investigation about Gene Modules Associated with hDPSC Differentiation for Adolescents
Q90054841	An Overview of Embryogenesis: External Morphology and Transcriptome Profiling in the Hemipteran Insect Nilaparvata lugens
Q27320092	An Ultrasensitive Mechanism Regulates Influenza Virus-Induced Inflammation
Q33555901	An additional k-means clustering step improves the biological features of WGCNA gene co-expression networks
Q58081543	An airway epithelial IL-17A response signature identifies a steroid-unresponsive COPD patient subgroup
Q50103325	An analytic approach for interpretable predictive models in high-dimensional data in the presence of interactions with exposures.
Q92992595	An anti-CRF antibody suppresses the HPA axis and reverses stress-induced phenotypes
Q38960008	An approach to infer putative disease-specific mechanisms using neighboring gene networks
Q90576203	An atlas of cortical circular RNA expression in Alzheimer disease brains demonstrates clinical and pathological associations
Q93073757	An eight-long non-coding RNA signature as a candidate prognostic biomarker for bladder cancer
Q31160817	An empirically driven data reduction method on the human 450K methylation array to remove tissue specific non-variable CpGs
Q99418649	An era of single-cell genomics consortia
Q98773451	An essential role for MEF2C in the cortical response to loss of sleep in mice
Q34115173	An immune response network associated with blood lipid levels
Q47270282	An improved Bayesian network method for reconstructing gene regulatory network based on candidate auto selection
Q34621466	An inferential framework for biological network hypothesis tests
Q38598947	An integrated analysis for long noncoding RNAs and microRNAs with the mediated competing endogenous RNA network in papillary renal cell carcinoma
Q57399675	An integrated analysis of genes and functional pathways for aggression in human and rodent models
Q55453653	An integrated analysis of genome‐wide DNA methylation and gene expression data in hepatocellular carcinoma.
Q33955431	An integrated genomic and metabolomic framework for cell wall biology in rice
Q95660427	An integrated multi-omics approach identifies the landscape of interferon-α-mediated responses of human pancreatic beta cells
Q37550211	An integrated systems genetics screen reveals the transcriptional structure of inherited predisposition to metastatic disease
Q30581260	An integrative analysis of meningioma tumors reveals the determinant genes and pathways of malignant transformation
Q41669625	An integrative analysis of regional gene expression profiles in the human brain.
Q37966594	An integrative functional genomics approach for discovering biomarkers in schizophrenia
Q61446023	An integrative genomic analysis of transcriptional profiles identifies characteristic genes and patterns in HIV-infected long-term non-progressors and elite controllers
Q90069484	An integrative pan-cancer analysis of biological and clinical impacts underlying ubiquitin-specific-processing proteases
Q36197014	An integrative systems genetics approach reveals potential causal genes and pathways related to obesity
Q59335144	An integrative transcriptome analysis indicates regulatory mRNA-miRNA networks for residual feed intake in Nelore cattle
Q38648346	An interaction map of circulating metabolites, immune gene networks, and their genetic regulation
Q61814671	An interaction-based model for neuropsychiatric features of copy-number variants
Q92292667	An outcome model for human bladder cancer: A comprehensive study based on weighted gene co-expression network analysis
Q37341560	An overview of bioinformatics methods for modeling biological pathways in yeast
Q90405779	An updated gene atlas for maize reveals organ-specific and stress-induced genes
Q33758337	Analogous mechanism regulating formation of neocortical basal radial glia and cerebellar Bergmann glia
Q41474970	Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing
Q55271983	Analysis of 182 cerebral palsy transcriptomes points to dysregulation of trophic signalling pathways and overlap with autism.
Q41552039	Analysis of Bos taurus and Sus scrofa X and Y chromosome transcriptome highlights reproductive driver genes
Q92297400	Analysis of Differentiation Protocols Defines a Common Pancreatic Progenitor Molecular Signature and Guides Refinement of Endocrine Differentiation
Q92862509	Analysis of Genes Involved in Ulcerative Colitis Activity and Tumorigenesis Through Systematic Mining of Gene Co-expression Networks
Q64947122	Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function.
Q90372434	Analysis of L-arginine:glycine amidinotransferase-, creatine- and homoarginine-dependent gene regulation in the murine heart
Q99711588	Analysis of Metabolites and Gene Expression Changes Relative to Apricot (Prunus armeniaca L.) Fruit Quality During Development and Ripening
Q40283693	Analysis of Mll1 deficiency identifies neurogenic transcriptional modules and Brn4 as a factor for direct astrocyte-to-neuron reprogramming.
Q37742862	Analysis of Purified Pancreatic Islet Beta and Alpha Cell Transcriptomes Reveals 11β-Hydroxysteroid Dehydrogenase (Hsd11b1) as a Novel Disallowed Gene.
Q36233059	Analysis of Transcriptional Variability in a Large Human iPSC Library Reveals Genetic and Non-genetic Determinants of Heterogeneity
Q60921344	Analysis of ambient temperature-responsive transcriptome in shoot apical meristem of heat-tolerant and heat-sensitive broccoli inbred lines during floral head formation
Q38604264	Analysis of cis-Regulatory Elements in Gene Co-expression Networks in Cancer.
Q90319279	Analysis of correlation-based biomolecular networks from different omics data by fitting stochastic block models
Q64257604	Analysis of gene co‑expression network reveals prognostic significance of CNFN in patients with head and neck cancer
Q92173364	Analysis of gene expression in rheumatoid arthritis and related conditions offers insights into sex-bias, gene biotypes and co-expression patterns
Q31149484	Analysis of global gene expression in Brachypodium distachyon reveals extensive network plasticity in response to abiotic stress
Q36281422	Analysis of long noncoding RNA and mRNA using RNA sequencing during the differentiation of intramuscular preadipocytes in chicken
Q35232883	Analysis of papaya cell wall-related genes during fruit ripening indicates a central role of polygalacturonases during pulp softening
Q38429221	Analysis of temporal expression profiles after sciatic nerve injury by bioinformatic method
Q91206011	Analysis of terpenoid biosynthesis pathways in German chamomile (Matricaria recutita) and Roman chamomile (Chamaemelum nobile) based on co-expression networks
Q92001150	Analysis of the Interaction Network of Hub miRNAs-Hub Genes, Being Involved in Idiopathic Pulmonary Fibers and Its Emerging Role in Non-small Cell Lung Cancer
Q27349288	Analysis of the dynamic co-expression network of heart regeneration in the zebrafish.
Q28536632	Analysis of time-resolved gene expression measurements across individuals
Q101403142	Analysis of transcriptional modules during human fibroblast ageing
Q35625685	Analysis of transcriptome complexity through RNA sequencing in normal and failing murine hearts
Q96618222	Analysis of tumor microenvironment-related key mRNAs and construction of a prognosis signature in colon cancer
Q35934605	Analysis of weighted co-regulatory networks in maize provides insights into new genes and regulatory mechanisms related to inositol phosphate metabolism
Q64244354	Analysis of whole genome-transcriptomic organization in brain to identify genes associated with alcoholism
Q38628811	Analytical Strategy to Prioritize Alzheimer's Disease Candidate Genes in Gene Regulatory Networks Using Public Expression Data
Q35149924	Analytical methods in untargeted metabolomics: state of the art in 2015.
Q98613037	Analyzing the lncRNA, miRNA, and mRNA-associated ceRNA networks to reveal potential prognostic biomarkers for glioblastoma multiforme
Q37263762	Analyzing the miRNA-Gene Networks to Mine the Important miRNAs under Skin of Human and Mouse
Q35151440	Ancestry dependent DNA methylation and influence of maternal nutrition
Q46073028	Ancient hybridization and strong adaptation to viruses across African vervet monkey populations.
Q64442692	Androgen and Oestrogen Affect the Expression of Long Non-Coding RNAs During Phallus Development in a Marsupial
Q41431411	Annotating long intergenic non-coding RNAs under artificial selection during chicken domestication
Q41590829	Annotation and cluster analysis of spatiotemporal- and sex-related lncRNA expression in rhesus macaque brain
Q58727960	Annotation and functional clustering of circRNA expression in rhesus macaque brain during aging
Q35206810	Annotation of gene function in citrus using gene expression information and co-expression networks
Q34266477	Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts
Q92983529	Ant behaviour and brain gene expression of defending hosts depend on the ecological success of the intruding social parasite
Q34345650	Antenatal prediction of postpartum depression with blood DNA methylation biomarkers
Q49597767	Anterior Pituitary Transcriptome Suggests Differences in ACTH Release in Tame and Aggressive Foxes.
Q64070793	Anti-TNF- αtreatment-related pathways and biomarkers revealed by transcriptome analysis in Chinese psoriasis patients
Q90209187	Anti-adipogenic signals at the onset of obesity-related inflammation in white adipose tissue
Q64065500	Antidepressants affect gut microbiota and Ruminococcus flavefaciens is able to abolish their effects on depressive-like behavior
Q58617295	Antisense oligonucleotide-mediated ataxin-1 reduction prolongs survival in SCA1 mice and reveals disease-associated transcriptome profiles
Q98735660	Aphid-Responsive Defense Networks in Hybrid Switchgrass
Q37076865	Apolipoprotein E4 (APOE4) Genotype Is Associated with Altered Levels of Glutamate Signaling Proteins and Synaptic Coexpression Networks in the Prefrontal Cortex in Mild to Moderate Alzheimer Disease
Q58696756	Application of Weighted Gene Co-Expression Network Analysis to Explore the Key Genes in Alzheimer's Disease
Q49225199	Application of Weighted Gene Co-expression Network Analysis for Data from Paired Design.
Q47637451	Application of a co‑expression network for the analysis of aggressive and non‑aggressive breast cancer cell lines to predict the clinical outcome of patients
Q35125656	Application of a low cost array-based technique - TAB-Array - for quantifying and mapping both 5mC and 5hmC at single base resolution in human pluripotent stem cells
Q90482415	Application of an antibody chip for screening differentially expressed proteins during peach ripening and identification of a metabolon in the SAM cycle to generate a peach ethylene biosynthesis model
Q47382803	Application of the Gini correlation coefficient to infer regulatory relationships in transcriptome analysis.
Q57073417	Application of weighted gene co-expression network analysis to identify key modules and hub genes in oral squamous cell carcinoma tumorigenesis
Q55258713	Applications of Bayesian network models in predicting types of hematological malignancies.
Q61817393	Assessment of complementarity of WGCNA and NERI results for identification of modules associated to schizophrenia spectrum disorders
Q27319460	Assessment of fight outcome is needed to activate socially driven transcriptional changes in the zebrafish brain
Q93023886	Assessment of network module identification across complex diseases
Q61807714	Assessment of weighted topological overlap (wTO) to improve fidelity of gene co-expression networks
Q33655335	Associating transcriptional modules with colon cancer survival through weighted gene co-expression network analysis
Q60912232	Associating transcriptional regulation for rapid germination of rapeseed (Brassica napus L.) under low temperature stress through weighted gene co-expression network analysis
Q36001595	Association between SNPs and gene expression in multiple regions of the human brain
Q35145742	Association between plasma metabolites and gene expression profiles in five porcine endocrine tissues.
Q92652989	Association of Key Genes and Pathways with Atopic Dermatitis by Bioinformatics Analysis
Q30000323	Association of Protein Translation and Extracellular Matrix Gene Sets with Breast Cancer Metastasis: Findings Uncovered on Analysis of Multiple Publicly Available Datasets Using Individual Patient Data Approach
Q53367533	Associative transcriptomics of traits in the polyploid crop species Brassica napus.
Q34679023	Associative transcriptomics study dissects the genetic architecture of seed glucosinolate content in Brassica napus.
Q47855094	Atherosclerosis is exacerbated by chitinase-3-like-1 in amyloid precursor protein transgenic mice
Q30010572	Audition-independent vocal crystallization associated with intrinsic developmental gene expression dynamics
Q99207826	Avelumab plus axitinib versus sunitinib in advanced renal cell carcinoma: biomarker analysis of the phase 3 JAVELIN Renal 101 trial
Q92480160	BCL9 provides multi-cellular communication properties in colorectal cancer by interacting with paraspeckle proteins
Q91727933	BEST: a web server for brain expression Spatio-temporal pattern analysis
Q38439064	BFDCA: A Comprehensive Tool of Using Bayes Factor for Differential Co-Expression Analysis
Q89997489	BINDER: computationally inferring a gene regulatory network for Mycobacterium abscessus
Q36377109	Bacterial Microbiome and Nematode Occurrence in Different Potato Agricultural Soils
Q34458252	Bacterial genospecies that are not ecologically coherent: population genomics of Rhizobium leguminosarum
Q35566022	Bariatric Surgery Induces Disruption in Inflammatory Signaling Pathways Mediated by Immune Cells in Adipose Tissue: A RNA-Seq Study
Q90581658	Bark tissue transcriptome analyses of inverted Populus yunnanensis cuttings reveal the crucial role of plant hormones in response to inversion
Q38741673	Behavioral, transcriptomic and epigenetic responses to social challenge in honey bees.
Q93073859	Benchmarking network propagation methods for disease gene identification
Q35047942	Berberine ameliorates nonalcoholic fatty liver disease by a global modulation of hepatic mRNA and lncRNA expression profiles
Q53838776	Beyond Enumeration: Functional and Computational Analysis of Circulating Tumor Cells to Investigate Cancer Metastasis.
Q28727736	Beyond differential expression: the quest for causal mutations and effector molecules
Q26830010	Beyond modules and hubs: the potential of gene coexpression networks for investigating molecular mechanisms of complex brain disorders
Q94075274	Biallelic mutations in neurofascin cause neurodevelopmental impairment and peripheral demyelination
Q30412670	Bicc1 is a genetic determinant of osteoblastogenesis and bone mineral density
Q89946731	Big data in IBD: big progress for clinical practice
Q38620250	Biochemical and Comparative Transcriptomic Analyses Identify Candidate Genes Related to Variegation Formation in Paeonia rockii.
Q100533781	Biogeographic parallels in thermal tolerance and gene expression variation under temperature stress in a widespread bumble bee
Q38293348	Bioinformatic analyses and conceptual synthesis of evidence linking ZNF804A to risk for schizophrenia and bipolar disorder
Q35948366	Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus (PRRSV) reveals pathway differences between pigs with alternate genotypes for a major host response QTL
Q96303708	Bioinformatics Analysis Reveals Biomarkers With Cancer Stem Cell Characteristics in Lung Squamous Cell Carcinoma
Q48098382	Bioinformatics Analysis in Identification of Key Gene Modules of Neuropathic Pain
Q38775538	Bioinformatics Tools for Genome-Wide Epigenetic Research
Q57179958	Bioinformatics Tools for the Interpretation of Metabolomics Data
Q92557186	Bioinformatics analysis identifies potential chemoresistance-associated genes across multiple types of cancer
Q98210280	Bioinformatics analysis of microRNA profiles and identification of microRNA-mRNA network and biological markers in intracranial aneurysm
Q35674363	Bioinformatics analysis of thousands of TCGA tumors to determine the involvement of epigenetic regulators in human cancer
Q50067728	Bioinformatics analysis to screen key genes implicated in the differentiation of induced pluripotent stem cells to hepatocytes.
Q38857787	Bioinformatics resources for pollen
Q91869056	Biological Network Approach for the Identification of Regulatory Long Non-Coding RNAs Associated With Metabolic Efficiency in Cattle
Q90723279	Biological Network Approaches and Applications in Rare Disease Studies
Q28068983	Biological Networks for Cancer Candidate Biomarkers Discovery
Q60938905	Biological Pathways Leading From ANGPTL8 to Diabetes Mellitus-A Co-expression Network Based Analysis
Q37487473	Biological marks of early-life socioeconomic experience is detected in the adult inflammatory transcriptome
Q41150803	Biological networks in Parkinson's disease: an insight into the epigenetic mechanisms associated with this disease
Q92572721	Biology and Bias in Cell Type-Specific RNAseq of Nucleus Accumbens Medium Spiny Neurons
Q50577725	Biomarker Development for Chronic Obstructive Pulmonary Disease. From Discovery to Clinical Implementation.
Q58781013	Bivariate Causal Discovery and Its Applications to Gene Expression and Imaging Data Analysis
Q61808118	Bladder cancer stage-associated hub genes revealed by WGCNA co-expression network analysis
Q97527694	Blood DNA methylation signatures to detect dementia prior to overt clinical symptoms
Q91875893	Blood Gene Expression Profile Study Revealed the Activation of Apoptosis and p53 Signaling Pathway May Be the Potential Molecular Mechanisms of Ionizing Radiation Damage and Radiation-Induced Bystander Effects
Q36187247	Blood Transcriptional Profiling Reveals Immunological Signatures of Distinct States of Infection of Humans with Leishmania infantum.
Q92016456	Blood co-expression modules identify potential modifier genes of diabetes and lung function in cystic fibrosis
Q38601598	Blood monocyte transcriptome and epigenome analyses reveal loci associated with human atherosclerosis
Q34629250	Blood-informative transcripts define nine common axes of peripheral blood gene expression.
Q46038098	Bovine osteopontin modifies the intestinal transcriptome of formula-fed infant rhesus monkeys to be more similar to those that were breastfed.
Q64093046	Brain Connectivity and Information-Flow Breakdown Revealed by a Minimum Spanning Tree-Based Analysis of MRI Data in Behavioral Variant Frontotemporal Dementia
Q34416063	Brain transcriptional and epigenetic associations with autism
Q50043527	Brain transcriptome databases: a user's guide.
Q89475249	BrainEXP: a database featuring with spatiotemporal expression variations and co-expression organizations in human brains
Q64969340	Brassica napus Infected with Leptosphaeria maculans.
Q89867380	Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus
Q92210741	Bronchoalveolar Lavage Fluid from COPD Patients Reveals More Compounds Associated with Disease than Matched Plasma
Q61124846	C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution
Q35643260	C9ORF72 GGGGCC Expanded Repeats Produce Splicing Dysregulation which Correlates with Disease Severity in Amyotrophic Lateral Sclerosis
Q39850417	C9orf72 is differentially expressed in the central nervous system and myeloid cells and consistently reduced in C9orf72, MAPT and GRN mutation carriers.
Q90356427	CAncer bioMarker Prediction Pipeline (CAMPP)-A standardized framework for the analysis of quantitative biological data
Q37242537	CCor: A whole genome network-based similarity measure between two genes
Q40865607	CD14 is a key organizer of microglial responses to CNS infection and injury
Q90581500	CD36 identified by weighted gene co-expression network analysis as a hub candidate gene in lupus nephritis
Q49843823	CEMiTool: a Bioconductor package for performing comprehensive modular co-expression analyses.
Q39424281	CGCDB: a web-based resource for the investigation of gene coexpression in CHO cell culture
Q24305288	CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors
Q42266393	CLK-dependent exon recognition and conjoined gene formation revealed with a novel small molecule inhibitor
Q96609471	CODC: a Copula-based model to identify differential coexpression
Q58778491	COPD is accompanied by co-ordinated transcriptional perturbation in the quadriceps affecting the mitochondria and extracellular matrix
Q46709445	CORAL REEFS. Genomic determinants of coral heat tolerance across latitudes
Q35110311	COSINE: COndition-SpecIfic sub-NEtwork identification using a global optimization method
Q30562180	CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data
Q33730180	CVE: an R package for interactive variant prioritisation in precision oncology.
Q96229704	CYCLIN-B1/2 and -D1 act in opposition to coordinate cortical progenitor self-renewal and lineage commitment
Q91768406	Caenorhabditis elegans hub genes that respond to amyloid beta are homologs of genes involved in human Alzheimer's disease
Q92446263	Cancer Associated Fibroblasts and Senescent Thyroid Cells in the Invasive Front of Thyroid Carcinoma
Q91939018	Cancer as a Tissue Anomaly: Classifying Tumor Transcriptomes Based Only on Healthy Data
Q40778155	Cancer as the Disintegration of Robustness: Population-Level Variance in Gene Expression Identifies Key Differences Between Tobacco- and HPV-Associated Oropharyngeal Carcinogenesis
Q35035236	Cancer-associated fibroblasts predict poor outcome and promote periostin-dependent invasion in oesophageal adenocarcinoma
Q35124393	Cancer-risk module identification and module-based disease risk evaluation: a case study on lung cancer
Q57821224	Candidate Biomarkers and Molecular Mechanism Investigation for Glioblastoma Multiforme Utilizing WGCNA
Q93052445	Candidate Regulators of Dyslipidemia in Chromosome 1 Substitution Lines Using Liver Co-Expression Profiling Analysis
Q37349915	Candidate gene networks and blood biomarkers of methamphetamine-associated psychosis: an integrative RNA-sequencing report
Q55346557	Candidate genes in gastric cancer identified by constructing a weighted gene co-expression network.
Q36428141	Canonical genetic signatures of the adult human brain
Q60044075	Canopy attachment position influences metabolism and peel constituency of European pear fruit
Q64246029	Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes
Q58097639	Cardiomyocyte gene programs encoding morphological and functional signatures in cardiac hypertrophy and failure
Q35681939	Carotenoid biosynthetic genes in Brassica rapa: comparative genomic analysis, phylogenetic analysis, and expression profiling
Q96136243	Caterpillars on a phytochemical landscape: The case of alfalfa and the Melissa blue butterfly
Q47208719	Cattle infection response network and its functional modules.
Q30711939	Causal inference of gene regulation with subnetwork assembly from genetical genomics data
Q90358194	CeRNA network analysis and functional enrichment of salt sensitivity of blood pressure by weighted-gene co-expression analysis
Q90484101	Cell Type Purification by Single-Cell Transcriptome-Trained Sorting
Q30863756	Cell Type Specific Analysis of Human Brain Transcriptome Data to Predict Alterations in Cellular Composition
Q91710159	Cell Type-Specific Gene Network-Based Analysis Depicts the Heterogeneity of Autism Spectrum Disorder
Q35743285	Cell cycle control, DNA damage repair, and apoptosis-related pathways control pre-ameloblasts differentiation during tooth development.
Q41869289	Cell cycle networks link gene expression dysregulation, mutation, and brain maldevelopment in autistic toddlers
Q93040438	Cell stress in cortical organoids impairs molecular subtype specification
Q37502513	Cell type-specific expression analysis to identify putative cellular mechanisms for neurogenetic disorders
Q61448542	Cell type-specific gene expression patterns associated with posttraumatic stress disorder in World Trade Center responders
Q92303059	Cell-Type Heterogeneity in Adipose Tissue Is Associated with Complex Traits and Reveals Disease-Relevant Cell-Specific eQTLs
Q52602405	Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer.
Q37277036	Cell-type deconvolution with immune pathways identifies gene networks of host defense and immunopathology in leprosy
Q40518118	CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations.
Q92358867	Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons
Q98463529	Cellular and molecular properties of neural progenitors in the developing mammalian hypothalamus
Q39103483	Cerebellar Transcriptome Profiles of ATXN1 Transgenic Mice Reveal SCA1 Disease Progression and Protection Pathways
Q40973302	Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain.
Q92203175	ChEA3: transcription factor enrichment analysis by orthogonal omics integration
Q37541730	Changes in gene expression within the extended amygdala following binge-like alcohol drinking by adolescent alcohol-preferring (P) rats
Q36991464	Changes in gene expression within the ventral tegmental area following repeated excessive binge-like alcohol drinking by alcohol-preferring (P) rats
Q47109740	Characteristics of allelic gene expression in human brain cells from single-cell RNA-seq data analysis
Q97066831	Characterization and transcriptome analysis of a dominant genic male sterile cotton mutant
Q91894114	Characterization of Blood Surrogate Immune-Methylation Biomarkers for Immune Cell Infiltration in Chronic Inflammaging Disorders
Q47349046	Characterization of a gene regulatory network underlying astringency loss in persimmon fruit.
Q92628685	Characterization of a prognostic four‑gene methylation signature associated with radiotherapy for head and neck squamous cell carcinoma
Q92164128	Characterization of cancer omics and drug perturbations in panels of lung cancer cells
Q52684668	Characterization of cross-tissue genetic-epigenetic effects and their patterns in schizophrenia.
Q36856689	Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding
Q37681790	Characterization of gene expression profiles in HBV-related liver fibrosis patients and identification of ITGBL1 as a key regulator of fibrogenesis
Q30572266	Characterization of genes for beef marbling based on applying gene coexpression network
Q38787638	Characterization of inflammatory markers and transcriptome profiles of differentially activated embryonic stem cell-derived microglia.
Q92335754	Characterization of potential biomarkers of reactogenicity of licensed antiviral vaccines: randomized controlled clinical trials conducted by the BIOVACSAFE consortium
Q44974321	Characterization of protein species and weighted protein co-expression network regulation of Escherichia coli in response to serum killing using a 2-DE based proteomics approach
Q58585671	Characterization of proteome variation during modern maize breeding
Q33881352	Characterization of transcriptional modules related to fibrosing-NAFLD progression.
Q31107765	Characterizing and annotating the genome using RNA-seq data
Q38927704	Characterizing heterogeneity in leukemic cells using single-cell gene expression analysis
Q89763137	Characterizing the Macrophage Response to Immunomodulatory Biomaterials Through Gene Set Analyses
Q35648793	Characterizing the neurotranscriptomic states in alternative stress coping styles.
Q33612677	Chemical and pathogen-induced inflammation disrupt the murine intestinal microbiome
Q55155504	Chemokine expression in the early response to injury in human airway epithelial cells.
Q92330362	Chicken adaptive response to low energy diet: main role of the hypothalamic lipid metabolism revealed by a phenotypic and multi-tissue transcriptomic approach
Q42261980	Chilling Affects Phytohormone and Post-Embryonic Development Pathways during Bud Break and Fruit Set in Apple (Malus domestica Borkh.).
Q91855017	Chromatin Decondensation by FOXP2 Promotes Human Neuron Maturation and Expression of Neurodevelopmental Disease Genes
Q41611140	Chromosome contacts in activated T cells identify autoimmune disease candidate genes
Q89834405	Chronic Chemogenetic Stimulation of the Nucleus Accumbens Produces Lasting Reductions in Binge Drinking and Ameliorates Alcohol-Related Morphological and Transcriptional Changes
Q35585158	Chronic ethanol exposure produces time- and brain region-dependent changes in gene coexpression networks
Q91869021	Circulating Serum MicroRNAs as Potential Diagnostic Biomarkers of Posttraumatic Stress Disorder: A Pilot Study
Q89847021	Circulating and tissue matricellular RNA and protein expression in calcific aortic valve disease
Q61448961	Circulating miR-3659 may be a potential biomarker of dyslipidemia in patients with obesity
Q59792850	Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity
Q90091240	Classification models for Invasive Ductal Carcinoma Progression, based on gene expression data-trained supervised machine learning
Q100955017	Classification of gastric cancers based on immunogenomic profiling
Q60926402	Classification of triple-negative breast cancers based on Immunogenomic profiling
Q89518295	Clozapine-induced transcriptional changes in the zebrafish brain
Q57785575	Clust: automatic extraction of optimal co-expressed gene clusters from gene expression data
Q61445276	Cluster analysis of replicated alternative polyadenylation data using canonical correlation analysis
Q28686900	Cluster and propensity based approximation of a network
Q47316954	Clustering single cells: a review of approaches on high-and low-depth single-cell RNA-seq data.
Q92107810	Co-Expression Network Analysis Identified Gene Signatures in Osteosarcoma as a Predictive Tool for Lung Metastasis and Survival
Q58703983	Co-Expression Network Analysis Identifies miRNA⁻mRNA Networks Potentially Regulating Milk Traits and Blood Metabolites
Q92712696	Co-Expression Network Analysis Revealed That the ATP5G1 Gene Is Associated With Major Depressive Disorder
Q64252076	Co-Expression Network Analysis and Hub Gene Selection for High-Quality Fiber in Upland Cotton (Gossypium hirsutum) Using RNA Sequencing Analysis
Q55642495	Co-Expression Network Analysis of AMPK and Autophagy Gene Products during Adipocyte Differentiation.
Q90048115	Co-Expression Network Analysis of Spleen Transcriptome in Rock Bream (Oplegnathus fasciatus) Naturally Infected with Rock Bream Iridovirus (RBIV)
Q38431089	Co-Expression Network and Pathway Analyses Reveal Important Modules of miRNAs Regulating Milk Yield and Component Traits.
Q92240324	Co-Expression Networks Reveal Potential Regulatory Roles of miRNAs in Fatty Acid Composition of Nelore Cattle
Q90471782	Co-abundance analysis reveals hidden players associated with high methane yield phenotype in sheep rumen microbiome
Q50498474	Co-expressed miRNAs in gastric adenocarcinoma.
Q54662622	Co-expression Network Analysis Identified COL8A1 Is Associated with the Progression and Prognosis in Human Colon Adenocarcinoma.
Q61800007	Co-expression Network Analysis Identifies Four Hub Genes Associated With Prognosis in Soft Tissue Sarcoma
Q58777410	Co-expression Network Analysis of Biomarkers for Adrenocortical Carcinoma
Q42057866	Co-expression Network Analysis of Human lncRNAs and Cancer Genes
Q47135441	Co-expression Network Approach Reveals Functional Similarities among Diseases Affecting Human Skeletal Muscle
Q92538765	Co-expression Networks Identify DHX15 RNA Helicase as a B Cell Regulatory Factor
Q91870878	Co-expression analysis and ceRNA network reveal eight novel potential lncRNA biomarkers in hepatocellular carcinoma
Q37508507	Co-expression analysis and identification of fecundity-related long non-coding RNAs in sheep ovaries
Q38099400	Co-expression analysis as tool for the discovery of transport proteins in photorespiration
Q34284046	Co-expression analysis of fetal weight-related genes in ovine skeletal muscle during mid and late fetal development stages
Q49613127	Co-expression analysis revealed PTCH1-3'UTR promoted cell migration and invasion by activating miR-101-3p/SLC39A6 axis in non-small cell lung cancer: implicating the novel function of PTCH1.
Q98937063	Co-expression analysis reveals interpretable gene modules controlled by trans-acting genetic variants
Q90578211	Co-expression clustering across flower development identifies modules for diverse floral forms in Achimenes (Gesneriaceae)
Q31143639	Co-expression network analysis and genetic algorithms for gene prioritization in preeclampsia
Q57485191	Co-expression network analysis identified CDH11 in association with progression and prognosis in gastric cancer
Q47155568	Co-expression network analysis identified FCER1G in association with progression and prognosis in human clear cell renal cell carcinoma
Q90078931	Co-expression network analysis identified hub genes critical to triglyceride and free fatty acid metabolism as key regulators of age-related vascular dysfunction in mice
Q47248494	Co-expression network analysis identified six hub genes in association with progression and prognosis in human clear cell renal cell carcinoma (ccRCC).
Q33643375	Co-expression network analysis identifies Spleen Tyrosine Kinase (SYK) as a candidate oncogenic driver in a subset of small-cell lung cancer
Q64945426	Co-expression network analysis identifies gonad- and embryo-associated protein modules in the sentinel species Gammarus fossarum.
Q38476964	Co-expression network analysis identifies transcriptional modules in the mouse liver.
Q90465663	Co-expression network analysis of gene expression profiles of HER2+ breast cancer-associated brain metastasis
Q47114714	Co-expression network analysis of the transcriptomes of rice roots exposed to various cadmium stresses reveals universal cadmium-responsive genes.
Q92862364	Co-expression network analysis predicts a key role of microRNAs in the adaptation of the porcine skeletal muscle to nutrient supply
Q89941876	Co-expression network analysis reveals the pivotal role of mitochondrial dysfunction and interferon signature in juvenile dermatomyositis
Q40365550	Co-expression network analysis reveals transcription factors associated to cell wall biosynthesis in sugarcane.
Q64082978	Co-expression network modeling identifies key long non-coding RNA and mRNA modules in altering molecular phenotype to develop stress-induced depression in rats
Q31095417	Co-expression network-based analysis of hippocampal expression data associated with Alzheimer's disease using a novel algorithm
Q89794433	Co-expression network-based identification of biomarkers correlated with the lymph node metastasis of patients with head and neck squamous cell carcinoma
Q36736951	Co-expression networks in generation of induced pluripotent stem cells.
Q91722114	Co-expression of key gene modules and pathways of human breast cancer cell lines
Q91130606	Co-regulation map of the human proteome enables identification of protein functions
Q35757507	CoGA: An R Package to Identify Differentially Co-Expressed Gene Sets by Analyzing the Graph Spectra.
Q55518790	CoNekT: an open-source framework for comparative genomic and transcriptomic network analyses.
Q50130441	Codominant grasses differ in gene expression under experimental climate extremes in native tallgrass prairie.
Q90347866	Coexisting EGFR and TP53 Mutations in Lung Adenocarcinoma Patients Are Associated With COMP and ITGB8 Upregulation and Poor Prognosis
Q38600617	Coexpression Analysis Reveals Key Gene Modules and Pathway of Human Coronary Heart Disease.
Q99584045	Coexpression Network Analysis Identifies a Novel Nine-RNA Signature to Improve Prognostic Prediction for Prostate Cancer Patients
Q42371590	Coexpression analysis identifies nuclear reprogramming barriers of somatic cell nuclear transfer embryos
Q35573268	Coexpression analysis of CD133 and CD44 identifies proneural and mesenchymal subtypes of glioblastoma multiforme.
Q34812747	Coexpression analysis of large cancer datasets provides insight into the cellular phenotypes of the tumour microenvironment.
Q34181391	Coexpression network analysis in abdominal and gluteal adipose tissue reveals regulatory genetic loci for metabolic syndrome and related phenotypes
Q36754891	Coexpression network analysis of the genes regulated by two types of resistance responses to powdery mildew in wheat
Q100751399	Coexpression network analysis reveals an MYB transcriptional activator involved in capsaicinoid biosynthesis in hot peppers
Q55502709	Coexpression network and phenotypic analysis identify metabolic pathways associated with the effect of warming on grain yield components in wheat.
Q90145752	Coexpression network revealing the plasticity and robustness of population transcriptome during the initial stage of domesticating energy crop Miscanthus lutarioriparius
Q38853817	Coexpression networks identify brain region-specific enhancer RNAs in the human brain
Q36032797	Cogena, a novel tool for co-expressed gene-set enrichment analysis, applied to drug repositioning and drug mode of action discovery
Q60047653	Cognitive and Functional Assessment of Psychosis Stratification Study (CoFAPSS): Rationale, Design, and Characteristics
Q47812059	Colon cancer recurrence‑associated genes revealed by WGCNA co‑expression network analysis
Q38287728	Combination of Supervised and Unsupervised Approaches for miRNA Target Prediction
Q50350908	Combinatory use of distinct single-cell RNA-seq analytical platforms reveals the heterogeneous transcriptome response.
Q91643231	Combined stress of ocean acidification and warming influence survival and drives differential gene expression patterns in the Antarctic pteropod, Limacina helicina antarctica
Q92960773	Combing the Hairball: Improving Visualization of miRNA-Target Interaction Networks
Q34610036	Combining association mapping and transcriptomics identify HD2B histone deacetylase as a genetic factor associated with seed dormancy in Arabidopsis thaliana
Q35149532	Combining functional genomics strategies identifies modular heterogeneity of breast cancer intrinsic subtypes
Q37332223	Combining genetic mapping with genome-wide expression in experimental autoimmune encephalomyelitis highlights a gene network enriched for T cell functions and candidate genes regulating autoimmunity
Q47308929	CommWalker: Correctly Evaluating Modules in Molecular Networks in Light of Annotation Bias.
Q49185989	Commensal microbiota modulate gene expression in the skin.
Q90311353	Common Nevus and Skin Cutaneous Melanoma: Prognostic Genes Identified by Gene Co-Expression Network Analysis
Q39180954	Common Stress Transcriptome Analysis Reveals Functional and Genomic Architecture Differences Between Early and Delayed Response Genes
Q37141460	Common disease signatures from gene expression analysis in Huntington's disease human blood and brain
Q64283871	Commonality in dysregulated expression of gene sets in cortical brains of individuals with autism, schizophrenia, and bipolar disorder
Q35946285	Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris
Q38442907	Comparative Gene Expression Analysis of Two Mouse Models of Autism: Transcriptome Profiling of the BTBR and En2 (-/-) Hippocampus.
Q64994145	Comparative Genomics and Transcriptomics During Sexual Development Gives Insight Into the Life History of the Cosmopolitan Fungus Fusarium neocosmosporiellum.
Q37497620	Comparative Systems Analyses Reveal Molecular Signatures of Clinically tested Vaccine Adjuvants
Q28354172	Comparative Temporal Transcriptome Profiling of Wheat near Isogenic Line Carrying Lr57 under Compatible and Incompatible Interactions
Q36973719	Comparative Transcriptome Analysis Identifies CCDC80 as a Novel Gene Associated with Pulmonary Arterial Hypertension
Q89495261	Comparative Transcriptome Analysis Reveals Key Pathways and Hub Genes in Rapeseed During the Early Stage of Plasmodiophora brassicae Infection
Q89511545	Comparative Transcriptome Analysis of Different Dendrobium Species Reveals Active Ingredients-Related Genes and Pathways
Q64099516	Comparative Transcriptomic Analysis Provides Insight into the Domestication and Improvement of Pear () Fruit
Q28584640	Comparative Transcriptomics Atlases Reveals Different Gene Expression Pattern Related to Fusarium Wilt Disease Resistance and Susceptibility in Two Vernicia Species
Q46270129	Comparative Transcriptomics of Seasonal Phenotypic Flexibility in Two North American Songbirds
Q96136122	Comparative analyses of caste, sex, and developmental stage-specific transcriptomes in two Temnothorax ants
Q47550760	Comparative analyses of co-evolving host-parasite associations reveal unique gene expression patterns underlying slavemaker raiding and host defensive phenotypes.
Q39105585	Comparative analysis of hepatocellular carcinoma and cirrhosis gene expression profiles
Q30431821	Comparative analysis of proteome and transcriptome variation in mouse
Q39544929	Comparative assessment of differential network analysis methods
Q38001459	Comparative co-expression analysis in plant biology
Q59800072	Comparative functional genomics analysis of bHLH gene family in rice, maize and wheat
Q89980498	Comparative functional genomics analysis of cytochrome P450 gene superfamily in wheat and maize
Q47134342	Comparative gene co-expression network analysis of epithelial to mesenchymal transition reveals lung cancer progression stages.
Q40181690	Comparative genomic evidence for the involvement of schizophrenia risk genes in antipsychotic effects.
Q98463580	Comparative genomics of muskmelon reveals a potential role for retrotransposons in the modification of gene expression
Q101216945	Comparative physiological and transcriptomic analysis of pear leaves under distinct training systems
Q92262754	Comparative physiological, metabolomic, and transcriptomic analyses reveal developmental stage-dependent effects of cluster bagging on phenolic metabolism in Cabernet Sauvignon grape berries
Q58106975	Comparative physiology and transcriptional networks underlying the heat shock response in Populus trichocarpa, Arabidopsis thaliana and Glycine max
Q38257514	Comparative study of computational methods for reconstructing genetic networks of cancer-related pathways
Q36096601	Comparative transcript profiling of alloplasmic male-sterile lines revealed altered gene expression related to pollen development in rice (Oryza sativa L.).
Q98386267	Comparative transcriptome analyses define genes and gene modules differing between two Populus genotypes with contrasting stem growth rates
Q36315212	Comparative transcriptome analyses of flower development in four species of Achimenes (Gesneriaceae).
Q56347722	Comparative transcriptome analysis of the interaction between Actinidia chinensis var. chinensis and Pseudomonas syringae pv. actinidiae in absence and presence of acibenzolar-S-methyl
Q107112039	Comparative transcriptome analysis reveals key epigenetic targets in SARS-CoV-2 infection
Q64067966	Comparative transcriptome analysis uncovers the regulatory functions of long noncoding RNAs in fruit development and color changes of
Q92977220	Comparative transcriptome and coexpression network analysis of carpel quantitative variation in Paeonia rockii
Q97517285	Comparative transcriptome and metabolomic profiling reveal the complex mechanisms underlying the developmental dynamics of tobacco leaves
Q58760196	Comparative transcriptome meta-analysis of Arabidopsis thaliana under drought and cold stress
Q34366797	Comparative transcriptomics in East African cichlids reveals sex- and species-specific expression and new candidates for sex differentiation in fishes
Q92282150	Comparative transcriptomics of 3 high-altitude passerine birds and their low-altitude relatives
Q42695415	Comparative transcriptomics of cyprinid minnows and carp in a common wild setting: a resource for ecological genomics in freshwater communities
Q92786337	Comparative transcriptomics of early petal development across four diverse species of Aquilegia reveal few genes consistently associated with nectar spur development
Q64067707	Comparative transcriptomics of social insect queen pheromones
Q42670594	Comparative transcriptomics reveal developmental turning points during embryogenesis of a hemimetabolous insect, the damselfly Ischnura elegans.
Q58801372	Comparative transcriptomics reveals suppressed expression of genes related to auxin and the cell cycle contributes to the resistance of cucumber against Meloidogyne incognita
Q36657352	Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants
Q90116626	Comparative transcriptomics reveals the difference in early endosperm development between maize with different amylose contents
Q89561592	Comparing Analytical Methods for the Gut Microbiome and Aging: Gut Microbial Communities and Body Weight in the Osteoporotic Fractures in Men (MrOS) Study
Q34137292	Comparing statistical methods for constructing large scale gene networks
Q30584130	Comparison and evaluation of pathway-level aggregation methods of gene expression data
Q21284318	Comparison of co-expression measures: mutual information, correlation, and model based indices
Q60046347	Comparison of efficacy of SHENQI compound and rosiglitazone in the treatment of diabetic vasculopathy analyzing multi-factor mediated disease-causing modules
Q58106776	Comparison of gene co-networks analysis provide a systems view of rice (Oryza sativa L.) response to Tilletia horrida infection
Q88580886	Comparison of gene co-networks reveals the molecular mechanisms of the rice (Oryza sativa L.) response to Rhizoctonia solani AG1 IA infection
Q90089529	Compensatory guaiacyl lignin biosynthesis at the expense of syringyl lignin in 4CL1-knockout poplar
Q92997623	Competing Endogenous RNA and Coexpression Network Analysis for Identification of Potential Biomarkers and Therapeutics in association with Metastasis Risk and Progression of Prostate Cancer
Q90727836	Competing endogenous RNA network profiling reveals novel host dependency factors required for MERS-CoV propagation
Q36492302	Complex systems dynamics in aging: new evidence, continuing questions
Q38734267	Complexities of gene expression patterns in natural populations of an extremophile fish (Poecilia mexicana, Poeciliidae).
Q89622432	Comprehensive Analysis of Competitive Endogenous RNAs Network, Being Associated With Esophageal Squamous Cell Carcinoma and Its Emerging Role in Head and Neck Squamous Cell Carcinoma
Q97646102	Comprehensive Analysis of Differentially Expressed lncRNAs in Gastric Cancer
Q64111190	Comprehensive Analysis of Driver Genes in Personal Genomes of Clear Cell Renal Cell Carcinoma
Q92641781	Comprehensive Analysis of LncRNA Reveals the Temporal-Specific Module of Goat Skeletal Muscle Development
Q98735751	Comprehensive Construction of a Circular RNA-Associated Competing Endogenous RNA Network Identified Novel Circular RNAs in Hypertrophic Cardiomyopathy by Integrated Analysis
Q91786147	Comprehensive Gene Expression Analysis in NMIBC Using RNA-seq Reveals New Therapy Strategies
Q35965563	Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree
Q90170765	Comprehensive analyses of the annexin (ANN) gene family in Brassica rapa, Brassica oleracea and Brassica napus reveals their roles in stress response
Q58558456	Comprehensive analysis of Long non-coding RNA expression in dorsal root ganglion reveals cell type specificity and dysregulation following nerve injury
Q64923598	Comprehensive analysis of NAC transcription factors uncovers their roles during fiber development and stress response in cotton.
Q38759770	Comprehensive analysis of PD-L1 expression in glioblastoma multiforme.
Q30671582	Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa
Q92208557	Comprehensive analysis of differentially expressed profiles of non‑coding RNAs in peripheral blood and ceRNA regulatory networks in non‑syndromic orofacial clefts
Q90278080	Comprehensive analysis of gene expression profiles provides insight into the pathogenesis of Crohn's disease
Q37663164	Comprehensive analysis of long non-coding RNAs highlights their spatio-temporal expression patterns and evolutional conservation in Sus scrofa.
Q64259342	Comprehensive and Systematic Analysis of Gene Expression Patterns Associated with Body Mass Index
Q64891282	Comprehensive bioinformatics analysis of lncRNAs in gastric cancer.
Q93050164	Comprehensive dissection of transcript and metabolite shifts during seed germination and post-germination stages in poplar
Q91568568	Comprehensive expression-based isoform biomarkers predictive of drug responses based on isoform co-expression networks and clinical data
Q64922761	Comprehensive functional profiling of long non-coding RNAs through a novel pan-cancer integration approach and modular analysis of their protein-coding gene association networks.
Q90618698	Comprehensive investigation of the clinical significance and molecular mechanisms of plasmacytoma variant translocation 1 in sarcoma using genome-wide RNA sequencing data
Q35717234	Comprehensive meta-analysis, co-expression, and miRNA nested network analysis identifies gene candidates in citrus against Huanglongbing disease
Q89556802	Comprehensive molecular characterization of mitochondrial genomes in human cancers
Q60047362	Comprehensive tissue-specific transcriptome profiling of pineapple () and building an eFP-browser for further study
Q47105089	Comprehensive transcriptome analysis reveals distinct regulatory programs during vernalization and floral bud development of orchardgrass (Dactylis glomerata L.).
Q41621272	Comprehensive transcriptome profiling of Salvia miltiorrhiza for discovery of genes associated with the biosynthesis of tanshinones and phenolic acids
Q92867009	Comprehensive transcriptomic analysis indicates brain regional specific alterations in type 2 diabetes
Q33905929	Comprehensive transcriptomics and proteomics analyses of pollinated and parthenocarpic litchi (Litchi chinensis Sonn.) fruits during early development
Q57881342	Computational Methods for Quality Check, Preprocessing and Normalization of RNA-Seq Data for Systems Biology and Analysis
Q92134487	Computational Oncology in the Multi-Omics Era: State of the Art
Q92571606	Computational Tools for Discovering and Engineering Natural Product Biosynthetic Pathways
Q36376343	Computational approaches for interpreting scRNA-seq data
Q39622052	Computational challenges in modeling gene regulatory events
Q36411905	Computational dynamic approaches for temporal omics data with applications to systems medicine
Q37181634	Computational genomic identification and functional reconstitution of plant natural product biosynthetic pathways.
Q45943371	Computer-aided biomarker discovery for precision medicine: data resources, models and applications.
Q47214283	ConGEMs: Condensed Gene Co-Expression Module Discovery Through Rule-Based Clustering and Its Application to Carcinogenesis
Q58703297	Condition-adaptive fused graphical lasso (CFGL): An adaptive procedure for inferring condition-specific gene co-expression network
Q40546996	Condition-dependent co-regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum
Q90267031	Conjunctival Microbiome-Host Responses Are Associated With Impaired Epithelial Cell Health in Both Early and Late Stages of Trachoma
Q38651544	Connectivity in gene coexpression networks negatively correlates with rates of molecular evolution in flowering plants.
Q89506709	Consensus Coexpression Network Analysis Identifies Key Regulators of Flower and Fruit Development in Wild Strawberry
Q46269088	Conservation analysis of long non-coding RNAs in plants
Q38477563	Conservation and divergence of gene expression plasticity following c. 140 million years of evolution in lodgepole pine (Pinus contorta) and interior spruce (Picea glauca×Picea engelmannii).
Q47651485	Conserved brain myelination networks are altered in Alzheimer's and other neurodegenerative diseases
Q71306466	Conserved cell types with divergent features in human versus mouse cortex
Q31110541	Consistency of biological networks inferred from microarray and sequencing data
Q38487543	Constitutively elevated salicylic acid levels alter photosynthesis and oxidative state but not growth in transgenic populus
Q37657960	Constructing Networks of Organelle Functional Modules in Arabidopsis
Q47263458	Constructing a comprehensive gene co-expression based interactome in Bos taurus
Q34345506	Constructing endophenotypes of complex diseases using non-negative matrix factorization and adjusted rand index
Q91806326	Constructing temporal regulatory cascades in the context of development and cell differentiation
Q52666830	Construction and Analysis of Gene Co-Expression Networks in Escherichia coli.
Q64064408	Construction and Analysis of lncRNA-Mediated ceRNA Network in Cervical Squamous Cell Carcinoma by Weighted Gene Co-Expression Network Analysis
Q38646016	Construction and Optimization of a Large Gene Coexpression Network in Maize Using RNA-Seq Data.
Q37027580	Construction and application of a co-expression network in Mycobacterium tuberculosis
Q64064082	Construction and dissection of the ceRNA‑ceRNA network reveals critical modules in depression
Q90481247	Construction and validation of an eight-gene signature with great prognostic value in bladder cancer
Q99411615	Construction of a 6-gene prognostic signature to assess prognosis of patients with pancreatic cancer
Q61805669	Construction of a high density genetic map of an interspecific cross of Capsicum chinense and Capsicum annuum and QTL analysis of floral traits
Q89522175	Construction of a prognosis‑associated long noncoding RNA‑mRNA network for multiple myeloma based on microarray and bioinformatics analysis
Q39181696	Construction of breast cancer gene regulatory networks and drug target optimization
Q92744259	Construction of prognostic risk prediction model of oral squamous cell carcinoma based on co-methylated genes
Q41173414	Construction of protein interaction network involved in lung adenocarcinomas using a novel algorithm
Q47723743	Contrasting Network Features between Free-Living and Particle-Attached Bacterial Communities in Taihu Lake
Q64242146	Contrasting patterns of divergence at the regulatory and sequence level in European natural populations
Q37611722	Contribution of Neuroepigenetics to Huntington's Disease.
Q94475872	Contribution of m6A subtype classification on heterogeneity of sepsis
Q54983701	Convergent Pathways in Idiopathic Autism Revealed by Time Course Transcriptomic Analysis of Patient-Derived Neurons.
Q92761174	Convergent eusocial evolution is based on a shared reproductive groundplan plus lineage-specific plastic genes
Q30881547	Convergent genetic and expression data implicate immunity in Alzheimer's disease
Q28650360	Convergent transcriptional specializations in the brains of humans and song-learning birds
Q49570654	Coordinated gene expression between Trichodesmium and its microbiome over day-night cycles in the North Pacific Subtropical Gyre.
Q54967353	Coordinated regulation of core and accessory genes in the multipartite genome of Sinorhizobium fredii.
Q38651984	Coordinated regulation of growth, activity and transcription in natural populations of the unicellular nitrogen-fixing cyanobacterium Crocosphaera.
Q92815640	Copy number variations primed lncRNAs deregulation contribute to poor prognosis in colorectal cancer
Q35048311	Coronary artery endothelial transcriptome in vivo: identification of endoplasmic reticulum stress and enhanced reactive oxygen species by gene connectivity network analysis
Q34894895	Correlated mRNAs and miRNAs from co-expression and regulatory networks affect porcine muscle and finally meat properties
Q42439587	Correlating transcriptional networks to breast cancer survival: a large-scale coexpression analysis
Q34098195	Correlation network analysis applied to complex biofilm communities
Q30827097	Correlation-Based Network Generation, Visualization, and Analysis as a Powerful Tool in Biological Studies: A Case Study in Cancer Cell Metabolism
Q35357735	Correlations between immune response and vascularization qRT-PCR gene expression clusters in squamous cervical cancer
Q30962063	Cosplicing network analysis of mammalian brain RNA-Seq data utilizing WGCNA and Mantel correlations
Q55514149	Covariate-dependent negative binomial factor analysis of RNA sequencing data.
Q36296355	Covariation and phenotypic integration in chemical communication displays: biosynthetic constraints and eco-evolutionary implications.
Q92920826	Cross-Species Co-analysis of Prefrontal Cortex Chronic Ethanol Transcriptome Responses in Mice and Monkeys
Q92800453	Cross-Species Gene Expression Analysis Reveals Gene Modules Implicated in Human Osteosarcoma
Q89862199	Cross-Species Root Transcriptional Network Analysis Highlights Conserved Modules in Response to Nitrate between Maize and Sorghum
Q33917888	Cross-species gene expression analysis identifies a novel set of genes implicated in human insulin sensitivity
Q38709510	Cross-species gene modules emerge from a systems biology approach to osteoarthritis.
Q89398144	Cross-species systems analysis of evolutionary toolkits of neurogenomic response to social challenge
Q34591559	Cross-species transcriptional network analysis reveals conservation and variation in response to metal stress in cyanobacteria
Q45738215	Crosstalk between Receptor and Non-receptor Mediated Chemical Modes of Action in Rat Livers Converges through a Dysregulated Gene Expression Network at Tumor Suppressor Tp53.
Q89927528	Crosstalk between heterotrimeric G protein-coupled signaling pathways and WRKY transcription factors modulating plant responses to suboptimal micronutrient conditions
Q90236079	Crucial Gene Identification in Carotid Atherosclerosis Based on Peripheral Blood Mononuclear Cell (PBMC) Data by Weighted (Gene) Correlation Network Analysis (WGCNA)
Q100750431	Crucial transcripts predict response to initial immunoglobulin treatment in acute Kawasaki disease
Q92452299	Cutaneous Immunoprofiles of Three Spotted Fever Group Rickettsia Cases
Q40102014	Cutaneous transcriptome analysis in NIH hairless mice.
Q88513806	Cytosine methylation predicts renal function decline in American Indians
Q33592044	DAWN: a framework to identify autism genes and subnetworks using gene expression and genetics
Q98289398	DHX36, BAX, and ARPC1B May Be Critical for the Diagnosis and Treatment of Tuberculosis
Q90065002	DIFFUSE: predicting isoform functions from sequences and expression profiles via deep learning
Q64061452	DLPFC transcriptome defines two molecular subtypes of schizophrenia
Q35690310	DNA Demethylation Dynamics in the Human Prenatal Germline
Q47795983	DNA Methylation and Transcription Patterns in Intestinal Epithelial Cells From Pediatric Patients With Inflammatory Bowel Diseases Differentiate Disease Subtypes and Associate With Outcome.
Q36499587	DNA co-methylation modules in postmortem prefrontal cortex tissues of European Australians with alcohol use disorders
Q61812139	DNA methylation GrimAge strongly predicts lifespan and healthspan
Q59543221	DNA methylation and inflammation marker profiles associated with a history of depression
Q52536411	DNA methylation as a marker of response in rheumatoid arthritis.
Q37477906	DNA methylation in lung cells is associated with asthma endotypes and genetic risk
Q90727897	DNA methylation modules associate with incident cardiovascular disease and cumulative risk factor exposure
Q49960041	DNA methylation modules in airway smooth muscle are associated with asthma severity.
Q91584597	DNA methylation profiling analysis identifies a DNA methylation signature for predicting prognosis and recurrence of lung adenocarcinoma
Q35748368	DNA methylation signatures in development and aging of the human prefrontal cortex
Q47593705	DNA methylation signatures of mood stabilizers and antipsychotics in bipolar disorder
Q99350002	DNA methylation study of Huntington's disease and motor progression in patients and in animal models
Q34778898	DNA modification study of major depressive disorder: beyond locus-by-locus comparisons
Q31065775	DTW-MIC Coexpression Networks from Time-Course Data
Q56886414	Data Curation can Improve the Prediction Accuracy of Metabolic Intrinsic Clearance
Q90681480	Data Integration in Poplar: 'Omics Layers and Integration Strategies
Q92345316	Dataset on the formation of Thioredoxin interacting protein (Txnip) containing redox sensitive high molecular weight nucleoprotein complexes
Q35983745	De Novo and Rare Variants at Multiple Loci Support the Oligogenic Origins of Atrioventricular Septal Heart Defects.
Q41299736	De novo Assembly of the Camellia nitidissima Transcriptome Reveals Key Genes of Flower Pigment Biosynthesis
Q37457383	De novo HAPLN1 expression hallmarks Wnt-induced stem cell and fibrogenic networks leading to aggressive human hepatocellular carcinomas
Q37629882	De novo Transcriptome Assembly of Chinese Kale and Global Expression Analysis of Genes Involved in Glucosinolate Metabolism in Multiple Tissues
Q89672582	De novo genome assembly and Hi-C analysis reveal an association between chromatin architecture alterations and sex differentiation in the woody plant Jatropha curcas
Q35813351	De novo transcriptome analysis of Medicago falcata reveals novel insights about the mechanisms underlying abiotic stress-responsive pathway
Q58602493	De novo transcriptome assembly of the bamboo snout beetle reveals ability to degrade lignocellulose of bamboo feedstock
Q55305444	Decipher reliable biomarkers of brain aging by integrating literature-based evidence with interactome data.
Q91810027	Deciphering Genetic Architecture of Adventitious Root and Related Shoot Traits in Populus Using QTL Mapping and RNA-Seq Data
Q58088609	Deciphering molecular properties of hypermutated gastrointestinal cancer
Q47159835	Deciphering transcriptional regulation in human embryonic stem cells specified towards a trophoblast fate
Q39426172	Decoding the Long Noncoding RNA During Cardiac Maturation: A Roadmap for Functional Discovery
Q92669541	Decoding the development of the human hippocampus
Q45899780	Deconvolution of Transcriptional Networks in Post-Traumatic Stress Disorder Uncovers Master Regulators Driving Innate Immune System Function.
Q39340417	Deconvolution of the Human Endothelial Transcriptome
Q90172402	Deconvolution of transcriptional networks identifies TCF4 as a master regulator in schizophrenia
Q57284121	Decreased RORC expression and downstream signaling in HTLV-1-associated Adult T-cell Lymphoma/Leukemia uncovers an antiproliferative IL17 link: a potential target for immunotherapy?
Q38871939	Deep Cap Analysis of Gene Expression (CAGE): Genome-Wide Identification of Promoters, Quantification of Their Activity, and Transcriptional Network Inference
Q99630141	Deep learning-based ovarian cancer subtypes identification using multi-omics data
Q92668705	Deep multiomics profiling of brain tumors identifies signaling networks downstream of cancer driver genes
Q57029721	Deep proteomic network analysis of Alzheimer's disease brain reveals alterations in RNA binding proteins and RNA splicing associated with disease
Q34059344	Deep sequencing of HIV-infected cells: insights into nascent transcription and host-directed therapy
Q35874298	Deep sequencing transcriptional fingerprinting of rice kernels for dissecting grain quality traits.
Q47857110	Default Patterning Produces Pan-cortical Glutamatergic and CGE/LGE-like GABAergic Neurons from Human Pluripotent Stem Cells
Q36328350	Defining Brugia malayi and Wolbachia symbiosis by stage-specific dual RNA-seq
Q42774626	Defining Trends in Global Gene Expression in Arabian Horses with Cerebellar Abiotrophy
Q64084225	Deletion of the KH1 Domain of Fmr1 Leads to Transcriptional Alterations and Attentional Deficits in Rats
Q66680670	Dengue-specific CD8+ T cell subsets display specialized transcriptomic and TCR profiles
Q92619198	Depicting the Core Transcriptome Modulating Multiple Abiotic Stresses Responses in Sesame (Sesamum indicum L.).
Q92978283	Depicting the genetic architecture of pediatric cancers through an integrative gene network approach
Q35953479	Derivation of a fifteen gene prognostic panel for six cancers.
Q89686128	Deriving disease modules from the compressed transcriptional space embedded in a deep autoencoder
Q58562196	Desiccation tolerance evolved through gene duplication and network rewiring in Lindernia
Q92660954	Design and Rationale of the ERA-CVD Consortium PREMED-CAD-Precision Medicine in Coronary Artery Disease
Q64097832	Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle
Q40900481	Detection of composite communities in multiplex biological networks
Q57046161	Detection of lncRNA-mRNA interaction modules by integrating eQTL with weighted gene co-expression network analysis
Q49445263	Detection of stable community structures within gut microbiota co-occurrence networks from different human populations.
Q55253854	Determination of Oocyte-Manipulation, Zygote-Manipulation, and Genome-Reprogramming Effects on the Transcriptomes of Bovine Blastocysts.
Q48143032	Deubiquitinating Enzyme OTU5 Contributes to DNA Methylation Patterns and Is Critical for Phosphate Nutrition Signals.
Q98186846	Developing a transcriptomic framework for testing testosterone-mediated handicap hypotheses
Q55107289	Development Of A Three-Gene Prognostic Signature For Hepatitis B Virus Associated Hepatocellular Carcinoma Based On Integrated Transcriptomic Analysis.
Q60916526	Development and Validation of a 9-Gene Prognostic Signature in Patients With Multiple Myeloma
Q97523116	Development and validation of a hypoxia-related gene signature to predict overall survival in early-stage lung adenocarcinoma patients
Q90043844	Development and validation of hub genes for lymph node metastasis in patients with prostate cancer
Q99609760	Development of Autophagy Signature-Based Prognostic Nomogram for Refined Glioma Survival Prognostication
Q89818686	Development of a four-gene prognostic model for pancreatic cancer based on transcriptome dysregulation
Q37295779	Development of a prediction model for radiosensitivity using the expression values of genes and long non-coding RNAs.
Q92804930	Development of a predictive model for stromal content in prostate cancer samples to improve signature performance
Q47135116	Development of multivariable models to predict change in Body Mass Index within a clinical trial population of psychotic individuals
Q58782209	Developmental Dynamics of Long Noncoding RNA Expression during Sexual Fruiting Body Formation in Fusarium graminearum
Q36775679	Developmental Progression in the Coral Acropora digitifera Is Controlled by Differential Expression of Distinct Regulatory Gene Networks
Q64934255	Developmental atlas of the RNA editome in Sus scrofa skeletal muscle.
Q50420532	Developmental diversification of cortical inhibitory interneurons.
Q91757700	Developmental transcriptomics of Chinese cordyceps reveals gene regulatory network and expression profiles of sexual development-related genes
Q57170624	Developments in toxicogenomics: understanding and predicting compound-induced toxicity from gene expression data
Q92628488	De novo transcriptome analysis of gene responses to pest feeding in leaves of Panax ginseng C. A. Meyer
Q95272917	DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models
Q92624560	Dickkopf-related protein 1 is a progestomedin acting on the bovine embryo during the morula-to-blastocyst transition to program trophoblast elongation
Q58798900	Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
Q92003357	Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection
Q50481527	Diel variation in fig volatiles across syconium development: making sense of scents.
Q33711526	DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules
Q34993956	Differences in DNA methylation between human neuronal and glial cells are concentrated in enhancers and non-CpG sites
Q59133608	Different Selectivity in Fungal Communities Between Manure and Mineral Fertilizers: A Study in an Alkaline Soil After 30 Years Fertilization
Q28550396	Different Statistical Approaches to Investigate Porcine Muscle Metabolome Profiles to Highlight New Biomarkers for Pork Quality Assessment
Q55051213	Different rearing conditions alter gut microbiota composition and host physiology in Shaoxing ducks.
Q33967285	Differential C3NET reveals disease networks of direct physical interactions
Q55408034	Differential Co-expression and Regulatory Network Analysis Uncover the Relapse Factor and Mechanism of T Cell Acute Leukemia.
Q60922882	Differential Connectivity in Colorectal Cancer Gene Expression Network
Q37396382	Differential DNA methylation marks and gene comethylation of COPD in African-Americans with COPD exacerbations
Q55004547	Differential Expression Profiling of Long Noncoding RNA and mRNA during Osteoblast Differentiation in Mouse.
Q37184355	Differential Network Analysis Reveals Evolutionary Complexity in Secondary Metabolism of Rauvolfia serpentina over Catharanthus roseus
Q28067474	Differential Regulatory Analysis Based on Coexpression Network in Cancer Research
Q40832654	Differential activation of immune/inflammatory response-related co-expression modules in the hippocampus across the major psychiatric disorders
Q89456959	Differential coexpression in human tissues and the confounding effect of mean expression levels
Q92659507	Differential coexpression networks in bronchiolitis and emphysema phenotypes reveal heterogeneous mechanisms of chronic obstructive pulmonary disease
Q90782004	Differential expression and co-expression gene network analyses reveal molecular mechanisms and candidate biomarkers involved in breast muscle myopathies in chicken
Q41974807	Differential expression and co-expression gene networks reveal candidate biomarkers of boar taint in non-castrated pigs
Q64979298	Differential expression of innate and adaptive immune genes in the survivors of three gibel carp gynogenetic clones after herpesvirus challenge.
Q92197348	Differential gene expression analysis in blood of first episode psychosis patients
Q64936935	Differential gene expression in relation to mating system in Peromyscine rodents.
Q42778083	Differential gene regulatory networks in development and disease
Q64069518	Differential gene regulatory pathways and co-expression networks associated with fire blight infection in apple ( × )
Q92347954	Differential network analysis and protein-protein interaction study reveals active protein modules in glucocorticoid resistance for infant acute lymphoblastic leukemia
Q34650653	Differential network analysis reveals genetic effects on catalepsy modules
Q91826895	Differential roles of human PUS10 in miRNA processing and tRNA pseudouridylation
Q90695461	Differential stromal reprogramming in benign and malignant naturally occurring canine mammary tumours identifies disease-modulating stromal components
Q37500904	Differentially Coexpressed Disease Gene Identification Based on Gene Coexpression Network
Q34289262	Differentially co-expressed genes in postmortem prefrontal cortex of individuals with alcohol use disorders: influence on alcohol metabolism-related pathways
Q61798284	Differentially expressed gene networks, biomarkers, long noncoding RNAs, and shared responses with cocaine identified in the midbrains of human opioid abusers
Q41468172	Differentiated transcriptional signatures in the maize landraces of Chiapas, Mexico.
Q42778111	Differing molecular response of young and advanced maternal age human oocytes to IVM.
Q92726018	Difficulty in inferring microbial community structure based on co-occurrence network approaches
Q37614624	Digital Gene Expression Analysis Provides Insight into the Transcript Profile of the Genes Involved in Aporphine Alkaloid Biosynthesis in Lotus (Nelumbo nucifera).
Q28596239	Dimension reduction techniques for the integrative analysis of multi-omics data
Q52581864	Direct and Indirect Effects of Penguin Feces on Microbiomes in Antarctic Ornithogenic Soils.
Q62617789	Discover Mouse Gene Coexpression Landscape Using Dictionary Learning and Sparse Coding
Q38431820	Discover mouse gene coexpression landscapes using dictionary learning and sparse coding
Q38619149	Discovering Condition-Specific Gene Co-Expression Patterns Using Gaussian Mixture Models: A Cancer Case Study.
Q28607787	Discovering New Biology through Sequencing of RNA
Q31047698	Discovering gene re-ranking efficiency and conserved gene-gene relationships derived from gene co-expression network analysis on breast cancer data.
Q35239689	Discovering study-specific gene regulatory networks
Q30976066	Discovery and characterization of long intergenic non-coding RNAs (lincRNA) module biomarkers in prostate cancer: an integrative analysis of RNA-Seq data
Q37615837	Discovery and functional prioritization of Parkinson's disease candidate genes from large-scale whole exome sequencing
Q37324683	Discovery approaches to UPR in athero-susceptible endothelium in vivo.
Q33681044	Discovery of consensus gene signature and intermodular connectivity defining self-renewal of human embryonic stem cells
Q35570011	Discovery of core biotic stress responsive genes in Arabidopsis by weighted gene co-expression network analysis
Q92557242	Discovery of core genes in colorectal cancer by weighted gene co-expression network analysis
Q37359148	Discovery of the molecular mechanisms of the novel chalcone-based Magnaporthe oryzae inhibitor C1 using transcriptomic profiling and co-expression network analysis
Q48108999	Discrete roles and bifurcation of PTEN signaling and mTORC1-mediated anabolic metabolism underlie IL-7-driven B lymphopoiesis.
Q96950911	Disease-related cellular protein networks differentially affected under different EGFR mutations in lung adenocarcinoma
Q36380503	Disease-related gene module detection based on a multi-label propagation clustering algorithm.
Q58569656	Disease-relevant transcriptional signatures identified in individual smooth muscle cells from healthy mouse vessels
Q64880229	Disrupted folate metabolism with anesthesia leads to myelination deficits mediated by epigenetic regulation of ERMN.
Q89794485	Disrupted gene networks in subfertile hybrid house mice
Q58699375	Disruption of mesoderm formation during cardiac differentiation due to developmental exposure to 13-cis-retinoic acid
Q90656413	Dissecting Brain Networks Underlying Alcohol Binge Drinking Using a Systems Genomics Approach
Q35924242	Dissecting genetics of cutaneous miRNA in a mouse model of an autoimmune blistering disease
Q30378484	Dissecting nutrient-related co-expression networks in phosphate starved poplars
Q52430458	Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly.
Q63951607	Dissecting the Genetics of Osteoporosis using Systems Approaches
Q33734563	Dissecting the Molecular Mechanisms of Neurodegenerative Diseases through Network Biology
Q92890034	Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
Q41887550	Dissection of complex gene expression using the combined analysis of pleiotropy and epistasis
Q33655867	Distinct and separable roles for EZH2 in neurogenic astroglia
Q36795394	Distinct brain transcriptome profiles in C9orf72-associated and sporadic ALS.
Q58084069	Distinct descending motor cortex pathways and their roles in movement
Q37472324	Distinct epigenomes in CD4+ T cells of newborns, middle-ages and centenarians
Q90427320	Distinct epigenomic and transcriptomic modifications associated with Wolbachia-mediated asexuality
Q64965839	Distinct leaf transcriptomic response of water deficient Eucalyptus grandis submitted to potassium and sodium fertilization.
Q92765247	Distinct nasal airway bacterial microbiotas differentially relate to exacerbation in pediatric patients with asthma
Q28714173	Distinct neurogenomic states in basal ganglia subregions relate differently to singing behavior in songbirds
Q101574127	Distinct regional ontogeny and activation of tumor associated macrophages in human glioblastoma
Q92723030	Distinct signatures of lung cancer types: aberrant mucin O-glycosylation and compromised immune response
Q64123259	Distinct transcriptional modules in the peripheral blood mononuclear cells response to human respiratory syncytial virus or to human rhinovirus in hospitalized infants with bronchiolitis
Q37010598	Distinct transcriptome profiles reveal gene expression patterns during fruit development and maturation in five main cultivated species of pear (Pyrus L.).
Q97422053	Distinct type 2-high inflammation associated molecular signatures of chronic rhinosinusitis with nasal polyps with comorbid asthma
Q102369288	Distinct whole-blood transcriptome profile of children with metabolic healthy overweight/obesity compared to metabolic unhealthy overweight/obesity
Q90379945	Distinctive Gene Expression Patterns Define Endodormancy to Ecodormancy Transition in Apricot and Peach
Q92043444	Diurnal variation in opsin expression and common housekeeping genes necessitates comprehensive normalization methods for quantitative real-time PCR analyses
Q41601243	Divergence in Morris Water Maze-Based Cognitive Performance under Chronic Stress Is Associated with the Hippocampal Whole Transcriptomic Modification in Mice
Q53824244	Divergence in problem-solving skills is associated with differential expression of glutamate receptors in wild finches.
Q34005022	Divergence of human and mouse brain transcriptome highlights Alzheimer disease pathways
Q92264936	Divergent Allometric Trajectories in Gene Expression and Coexpression Produce Species Differences in Sympatrically Speciating Midas Cichlid Fish
Q58716431	Divergent brain gene expression patterns associate with distinct cell-specific tau neuropathology traits in progressive supranuclear palsy
Q92360919	Divergent gene expression networks underlie morphological diversity of abscission zones in grasses
Q90573489	Divergent roles of astrocytic versus neuronal EAAT2 deficiency on cognition and overlap with aging and Alzheimer's molecular signatures
Q93009115	Diverse biological processes coordinate the transcriptional response to nutritional changes in a Drosophila melanogaster multiparent population
Q59073128	Diverse reprogramming codes for neuronal identity
Q60917996	Do sputum or circulating blood samples reflect the pulmonary transcriptomic differences of COPD patients? A multi-tissue transcriptomic network META-analysis
Q60931088	Domestication and Temperature Modulate Gene Expression Signatures and Growth in the Australasian Snapper
Q28251117	Domestication of the dog from the wolf was promoted by enhanced excitatory synaptic plasticity: a hypothesis
Q60045129	Dopamine perturbation of gene co-expression networks reveals differential response in schizophrenia for translational machinery
Q90683211	Dopamine response gene pathways in dorsal striatum MSNs from a gene expression viewpoint: cAMP-mediated gene networks
Q90400934	Dramatic Remodeling of the Gut Microbiome Around Parturition and Its Relationship With Host Serum Metabolic Changes in Sows
Q90116125	Drivers of topoisomerase II poisoning mimic and complement cytotoxicity in AML cells
Q92006567	Drosophila RpS12 controls translation, growth, and cell competition through Xrp1
Q92899713	Drought resistance is mediated by divergent strategies in closely related Brassicaceae
Q37264545	Drought response transcriptomes are altered in poplar with reduced tonoplast sucrose transporter expression
Q89530584	Drought tolerance of the grapevine, Vitis champinii cv. Ramsey, is associated with higher photosynthesis and greater transcriptomic responsiveness of abscisic acid biosynthesis and signaling
Q39158813	Drought-related secondary metabolites of barley (Hordeum vulgare L.) leaves and their metabolomic quantitative trait loci.
Q28553245	Drug Repositioning through Systematic Mining of Gene Coexpression Networks in Cancer
Q91655025	Drug Repurposing of Bromodomain Inhibitors as Potential Novel Therapeutic Leads for Lymphatic Filariasis Guided by Multispecies Transcriptomics
Q30276179	Drug repositioning in SLE: crowd-sourcing, literature-mining and Big Data analysis.
Q90147950	Druggable Transcriptional Networks in the Human Neurogenic Epigenome
Q40214158	Dual Linkage of a Locus to Left Ventricular Mass and a Cardiac Gene Co-Expression Network Driven by a Chromosome Domain
Q64117130	Dual RNA-Seq of Human Leprosy Lesions Identifies Bacterial Determinants Linked to Host Immune Response
Q91063363	Dual RNA-seq reveals large-scale non-conserved genotype × genotype-specific genetic reprograming and molecular crosstalk in the mycorrhizal symbiosis
Q37593791	Dual RNA-seq reveals viral infections in asthmatic children without respiratory illness which are associated with changes in the airway transcriptome
Q35845414	Dual-trait selection for ethanol consumption and withdrawal: genetic and transcriptional network effects
Q36802144	Duplications in ADHD patients harbour neurobehavioural genes that are co-expressed with genes associated with hyperactivity in the mouse
Q92703595	Dynamic Changes in Metabolite Accumulation and the Transcriptome during Leaf Growth and Development in Eucommia ulmoides
Q91747714	Dynamic Gene Network Analysis of Caco-2 Cell Response to Shiga Toxin-Producing Escherichia coli-Associated Hemolytic-Uremic Syndrome
Q42577988	Dynamic Organization of lncRNA and Circular RNA Regulators Collectively Controlled Cardiac Differentiation in Humans
Q64901576	Dynamic Transcriptome Changes Related to Oil Accumulation in Developing Soybean Seeds.
Q92734828	Dynamic accumulation of fatty acids in duck (Anas platyrhynchos) breast muscle and its correlations with gene expression
Q46288430	Dynamic landscape and regulation of RNA editing in mammals.
Q36285394	Dynamic landscape of tandem 3' UTRs during zebrafish development
Q58782288	Dynamic modeling of transcriptional gene regulatory network uncovers distinct pathways during the onset of Arabidopsis leaf senescence
Q48504501	Dynamic sporulation gene co-expression networks for Bacillus subtilis 168 and the food-borne isolate Bacillus amyloliquefaciens: a transcriptomic model.
Q101051283	Dynamic transcriptional response of Saccharomyces cerevisiae cells to copper
Q40614375	Dynamical properties of gene regulatory networks involved in long-term potentiation
Q33563393	Dynamics of HSPC repopulation in nonhuman primates revealed by a decade-long clonal-tracking study
Q64077223	Dynamics of cardiomyocyte transcriptome and chromatin landscape demarcates key events of heart development
Q89880241	Dynamics of the Transcriptome Response to Heat in the Moss, Physcomitrella patens
Q93059776	Dynamics of transcriptome changes during subcutaneous preadipocyte differentiation in ducks
Q35220835	Dysfunction of the CNS-heart axis in mouse models of Huntington's disease
Q37644920	Dysregulated long intergenic non-coding RNA modules contribute to heart failure
Q35583817	Dysregulated mechanisms underlying Duchenne muscular dystrophy from co-expression network preservation analysis
Q48020417	Dysregulation of Cortical Neuron DNA Methylation Profile in Autism Spectrum Disorder.
Q64915784	Dysregulation of a specific immune-related network of genes biologically defines a subset of schizophrenia.
Q92153761	E2F1 Drives Breast Cancer Metastasis by Regulating the Target Gene FGF13 and Altering Cell Migration
Q39086626	EGAD: ultra-fast functional analysis of gene networks
Q61807502	EGFR deficiency leads to impaired self-renewal and pluripotency of mouse embryonic stem cells
Q38766679	ELAVL2-regulated transcriptional and splicing networks in human neurons link neurodevelopment and autism
Q46245237	EUCANEXT: an integrated database for the exploration of genomic and transcriptomic data from Eucalyptus species.
Q37510014	EXPLORING THE REPRODUCIBILITY OF PROBABILISTIC CAUSAL MOLECULAR NETWORK MODELS.
Q43047331	Early Transcriptional Divergence Marks Virus-Specific Primary Human CD8+ T Cells in Chronic versus Acute Infection
Q57295508	Early neurogenomic response associated with variation in guppy female mate preference
Q45940216	Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.
Q47114679	Early-onset and classical forms of type 2 diabetes show impaired expression of genes involved in muscle branched-chain amino acids metabolism
Q41918684	Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics
Q92451351	EdgeScaping: Mapping the spatial distribution of pairwise gene expression intensities
Q91966315	Effect of Ethylene on Cell Wall and Lipid Metabolism during Alleviation of Postharvest Chilling Injury in Peach
Q60949690	Effects of Epithelial IL-13Rα2 Expression in Inflammatory Bowel Disease
Q60949811	Effects of Genotype on Brain Proteomic Network and Cell Type Changes in Alzheimer's Disease
Q83500507	Effects of hub genes on the clinicopathological and prognostic features of lung adenocarcinoma
Q39036788	Effects of selection for ethanol preference on gene expression in the nucleus accumbens of HS-CC mice
Q36642371	Effects on gene expression in rat liver after administration of RXR agonists: UAB30, 4-methyl-UAB30, and Targretin (Bexarotene).
Q27304699	Efficient and biologically relevant consensus strategy for Parkinson's disease gene prioritization.
Q40962247	Efficient exploration of pan-cancer networks by generalized covariance selection and interactive web content
Q90464035	Efficient identification of multiple pathways: RNA-Seq analysis of livers from 56Fe ion irradiated mice
Q48223537	Effluent and serum protein N-glycosylation is associated with inflammation and peritoneal membrane transport characteristics in peritoneal dialysis patients.
Q55050363	Elementary screening of lymph node metastatic-related genes in gastric cancer based on the co-expression network of messenger RNA, microRNA and long non-coding RNA.
Q50531818	Elevated TREM2 Gene Dosage Reprograms Microglia Responsivity and Ameliorates Pathological Phenotypes in Alzheimer's Disease Models.
Q91891515	Elevated protein synthesis in microglia causes autism-like synaptic and behavioral aberrations
Q64271654	Eleven genes associated with progression and prognosis of endometrial cancer (EC) identified by comprehensive bioinformatics analysis
Q35558536	Elucidating butanol tolerance mediated by a response regulator Sll0039 in Synechocystis sp. PCC 6803 using a metabolomic approach
Q42778237	Elucidating the Role of Host Long Non-Coding RNA during Viral Infection: Challenges and Paths Forward.
Q36860276	Elucidation of molecular and functional heterogeneity through differential expression network analyses of discrete tumor subsets
Q90589470	Embryonic endothelial evolution towards first hematopoietic stem cells revealed by single-cell transcriptomic and functional analyses
Q58122640	Emerging Biomarkers in Bladder Cancer Identified by Network Analysis of Transcriptomic Data
Q39259460	Emerging roles for ncRNAs in alcohol use disorders
Q52657397	Endoplasmic Reticulum Protein TXNDC5 Augments Myocardial Fibrosis by Facilitating Extracellular Matrix Protein Folding and Redox-Sensitive Cardiac Fibroblast Activation.
Q36320823	Enhanced construction of gene regulatory networks using hub gene information
Q57176414	Enhanced exposure assessment and genome-wide DNA methylation in World Trade Center disaster responders
Q41202130	Enhancement of Environmental Hazard Degradation in the Presence of Lignin: a Proteomics Study
Q50312713	Enhancing biological relevance of a weighted gene co-expression network for functional module identification.
Q64937259	Enhancing face validity of mouse models of Alzheimer's disease with natural genetic variation.
Q64293656	Enhancing gene set enrichment using networks
Q48276910	Enriched expression of genes associated with autism spectrum disorders in human inhibitory neurons.
Q28544882	Ensemble-based network aggregation improves the accuracy of gene network reconstruction
Q36195662	Enteral High Fat-Polyunsaturated Fatty Acid Blend Alters the Pathogen Composition of the Intestinal Microbiome in Premature Infants with an Enterostomy
Q36243063	Enumerateblood - an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles
Q92642757	Environmental DNA reveals seasonal shifts and potential interactions in a marine community
Q54943176	Environmental Sources of Bacteria Differentially Influence Host-Associated Microbial Dynamics.
Q64241092	Environmental and Evolutionary Drivers of the Modular Gene Regulatory Network Underlying Phenotypic Plasticity for Stress Resistance in the Nematode
Q38624954	Environmental drivers of a microbial genomic transition zone in the ocean's interior.
Q47111332	EpiDenovo: a platform for linking regulatory de novo mutations to developmental epigenetics and diseases.
Q52332848	Epigenetic alterations to Polycomb targets precede malignant transition in a mouse model of breast cancer.
Q30415888	Epigenetic coordination of signaling pathways during the epithelial-mesenchymal transition
Q55008852	Epigenetic drift of H3K27me3 in aging links glycolysis to healthy longevity in Drosophila.
Q35626140	Epigenetic modulation of brain gene networks for cocaine and alcohol abuse.
Q21135613	Epigenetic predictor of age
Q94527017	Epigenetic regulation of neuronal cell specification inferred with single cell "Omics" data
Q38754538	Epigenetic variation between human induced pluripotent stem cell lines is an indicator of differentiation capacity
Q57156070	Epigenetics, heritability and longitudinal analysis
Q92956153	Epigenome-wide association study of leukocyte telomere length
Q37519714	Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Q41573772	Epigenomics of Major Depressive Disorders and Schizophrenia: Early Life Decides
Q35254765	EpilepsyGene: a genetic resource for genes and mutations related to epilepsy.
Q37473831	Epipolymorphisms associated with the clinical outcome of autoimmune arthritis affect CD4+ T cell activation pathways.
Q33877466	Epistatic Networks Jointly Influence Phenotypes Related to Metabolic Disease and Gene Expression in Diversity Outbred Mice.
Q91804158	Epithelial-mesenchymal transition markers screened in a cell-based model and validated in lung adenocarcinoma
Q59799149	Epithelial-to-mesenchymal transition signature assessment in colorectal cancer quantifies tumour stromal content rather than true transition
Q92251957	Equine arteritis virus long-term persistence is orchestrated by CD8+ T lymphocyte transcription factors, inhibitory receptors, and the CXCL16/CXCR6 axis
Q91710011	Erosion of Gene Co-expression Networks Reveal Deregulation of Immune System Processes in Late-Onset Alzheimer's Disease
Q90524253	Erythrocyte PUFAs, circulating acylcarnitines, and metabolic syndrome risk: a prospective study in Chinese
Q91641872	Essential gene prediction in Drosophila melanogaster using machine learning approaches based on sequence and functional features
Q33747201	Establishment of the model system between phytochemicals and gene expression profiles in Macrosclereid cells of Medicago truncatula.
Q64107612	Estimating Sample-Specific Regulatory Networks
Q92029600	Estimation of immune cell content in tumor using single-cell RNA-seq reference data
Q42362879	Estimation of metabolite networks with regard to a specific covariable: applications to plant and human data.
Q46818303	Estimation of the proteomic cancer co-expression sub networks by using association estimators
Q92969709	Evaluating and Predicting the Probability of Death in Patients with Non-Metastatic Osteosarcoma: A Population-Based Study
Q35503617	Evaluating intra- and inter-individual variation in the human placental transcriptome
Q92955804	Evaluating measures of association for single-cell transcriptomics
Q36409543	Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size
Q92425143	Evaluation of dynamic developmental processes and the molecular basis of the high body fat percentage of different proglottid types of Moniezia expansa
Q59326912	Evaluation of the prognostic value of paraoxonase 1 in the recurrence and metastasis of hepatocellular carcinoma and establishment of a liver-specific predictive model of survival
Q36665510	Evidence for maternal control of seed size in maize from phenotypic and transcriptional analysis
Q49396002	Evidence for widespread dysregulation of circadian clock progression in human cancer.
Q42724536	EvoCor: a platform for predicting functionally related genes using phylogenetic and expression profiles
Q37589158	Evolution of gut microbiota composition from birth to 24 weeks in the INFANTMET Cohort.
Q34544101	Evolution of herbivore-induced early defense signaling was shaped by genome-wide duplications in Nicotiana
Q41625353	Evolutionary Conservation and Divergence of Gene Coexpression Networks in Gossypium (Cotton) Seeds.
Q64104561	Evolutionary conservation of MLO gene promoter signatures
Q38436245	Evolutionary constraints shape caste-specific gene expression across 15 ant species.
Q35591746	Evolutionary genomics. Evolutionary changes in promoter and enhancer activity during human corticogenesis.
Q90591714	Evolutionary transcriptomics of metazoan biphasic life cycle supports a single intercalation origin of metazoan larvae
Q57281823	Examining the contribution of smoking and HPV towards the etiology of oral cavity squamous cell carcinoma using high-throughput sequencing: A prospective observational study
Q42677218	Exercise and high-fat feeding remodel transcript-metabolite interactive networks in mouse skeletal muscle.
Q100737290	Exome sequencing implicates genetic disruption of prenatal neuro-gliogenesis in sporadic congenital hydrocephalus
Q99546168	Expanding the Perseus Software for Omics Data Analysis With Custom Plugins
Q100388934	Expansion of the circadian transcriptome in Brassica rapa and genome-wide diversification of paralog expression patterns
Q52660744	Experimental Chagas disease-induced perturbations of the fecal microbiome and metabolome.
Q99557373	Experimental autoimmune encephalomyelitis is associated with changes of the microbiota composition in the gastrointestinal tract
Q39807149	Exploiting aberrant mRNA expression in autism for gene discovery and diagnosis.
Q60908644	Exploiting locational and topological overlap model to identify modules in protein interaction networks
Q48294441	Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield.
Q58797385	Exploration of the Regulatory Mechanism of Secondary Metabolism by Comparative Transcriptomics in
Q92684061	Exploration of the hub genes and miRNAs in lung adenocarcinoma
Q93059768	Exploration of tissue-specific gene expression patterns underlying timing of breeding in contrasting temperature environments in a song bird
Q36994817	Exploring Transcription Factors-microRNAs Co-regulation Networks in Schizophrenia
Q42370714	Exploring candidate biological functions by Boolean Function Networks for Saccharomyces cerevisiae
Q33677918	Exploring functions of long noncoding RNAs across multiple cancers through co-expression network
Q55253402	Exploring gene expression biomarker candidates for neurobehavioral impairment from total sleep deprivation
Q36149613	Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approach
Q90929458	Exploring specific prognostic biomarkers in triple-negative breast cancer
Q34256530	Exploring the transcriptome of ciliated cells using in silico dissection of human tissues
Q37687533	Exploring timing activation of functional pathway based on differential co-expression analysis in preimplantation embryogenesis
Q37629317	Expression Patterns of Atlantic Sturgeon (Acipenser oxyrinchus) During Embryonic Development.
Q92128332	Expression alteration of microRNAs in Nucleus Accumbens is associated with chronic stress and antidepressant treatment in rats
Q28681199	Expression analysis of the speech-related genes FoxP1 and FoxP2 and their relation to singing behavior in two songbird species
Q38724314	Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon
Q99591966	Expression correlation attenuates within and between key signaling pathways in chronic kidney disease
Q64882952	Expression dynamics of repetitive DNA in early human embryonic development.
Q51201669	Expression of CD14, IL10, and Tolerogenic Signature in Dendritic Cells Inversely Correlate with Clinical and Immunologic Response to TARP Vaccination in Prostate Cancer Patients.
Q92257905	Expression of Heat Shock Proteins in Thermally Challenged Pacific Abalone Haliotis discus hannai
Q96953608	Expression of S100A Alarmins in Cord Blood Monocytes Is Highly Associated With Chorioamnionitis and Fetal Inflammation in Preterm Infants
Q64286882	Expression of long non-coding RNA ENSG00000226738 (LncKLHDC7B) is enriched in the immunomodulatory triple-negative breast cancer subtype and its alteration promotes cell migration, invasion, and resistance to cell death
Q91634146	Expression profile analysis identifies key genes as prognostic markers for metastasis of osteosarcoma
Q47343750	Expression profile analysis of long noncoding RNA in Acute Myeloid Leukemia by microarray and bioinformatics.
Q90136521	Expression profile analysis of prognostic long non-coding RNA in adult acute myeloid leukemia by weighted gene co-expression network analysis (WGCNA)
Q99581504	Expression profile analysis to predict potential biomarkers for glaucoma: BMP1, DMD and GEM
Q90923267	Expression profile of long non-coding RNAs in cervical spondylotic myelopathy of rats by microarray and bioinformatics analysis
Q93103668	Expression profiles of circRNAs and the potential diagnostic value of serum circMARK3 in human acute Stanford type A aortic dissection
Q37488122	Expression profiling and functional annotation of noncoding genes across 11 distinct organs in rat development
Q37540507	Expression profiling of Aldh1l1-precursors in the developing spinal cord reveals glial lineage-specific genes and direct Sox9-Nfe2l1 interactions
Q100464784	Extensive fragmentation and re-organization of transcription in Systemic Lupus Erythematosus
Q90595575	Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriers
Q59794511	Extracellular vesicles produced in B cells deliver tumor suppressor miR-335 to breast cancer cells disrupting oncogenic programming in vitro and in vivo
Q92859383	Extracting Pathway-level Signatures from Proteogenomic Data in Breast Cancer Using Independent Component Analysis
Q36994579	Extracting a low-dimensional description of multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer
Q48318996	Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla.
Q90470862	FAM13A affects body fat distribution and adipocyte function
Q90697853	FBXW4 Acts as a Protector of FOLFOX-Based Chemotherapy in Metastatic Colorectal Cancer Identified by Co-Expression Network Analysis
Q47155833	FGMD: A novel approach for functional gene module detection in cancer
Q28973611	FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders
Q47419522	FOXP1 expression is a prognostic biomarker in follicular lymphoma treated with rituximab and chemotherapy.
Q91889867	FSM: Fast and scalable network motif discovery for exploring higher-order network organizations
Q64230212	Factors Regulating microRNA Expression and Function in Multiple Myeloma
Q46513781	FamNet: A Framework to Identify Multiplied Modules Driving Pathway Expansion in Plants.
Q42239626	Fast R Functions for Robust Correlations and Hierarchical Clustering
Q89496912	Fast and Accurate Detection of Complex Imaging Genetics Associations Based on Greedy Projected Distance Correlation
Q35545222	FastGCN: a GPU accelerated tool for fast gene co-expression networks
Q36753925	Fatty Acid Oxidation is Impaired in An Orthologous Mouse Model of Autosomal Dominant Polycystic Kidney Disease
Q99565017	Fgr kinase is required for proinflammatory macrophage activation during diet-induced obesity
Q37137238	Fibroblast growth factor 21 reflects liver fat accumulation and dysregulation of signalling pathways in the liver of C57BL/6J mice.
Q37687627	Fibroblast growth factor receptor (FGFR) alterations in squamous differentiated bladder cancer: a putative therapeutic target for a small subgroup
Q56975350	Fire ant social chromosomes: Differences in number, sequence and expression of odorant binding proteins
Q50016443	Five Novel Oncogenic Signatures Could Be Utilized as AFP-Related Diagnostic Biomarkers for Hepatocellular Carcinoma Based on Next-Generation Sequencing.
Q64117305	Five-long non-coding RNA risk score system for the effective prediction of gastric cancer patient survival
Q33358444	Floral Transcriptomes in Woodland Strawberry Uncover Developing Receptacle and Anther Gene Networks.
Q99350281	Floral transcriptomes reveal gene networks in pineapple floral growth and fruit development
Q36008447	Fmr1 deficiency promotes age-dependent alterations in the cortical synaptic proteome.
Q27322723	FoxP1 orchestration of ASD-relevant signaling pathways in the striatum
Q48185920	FoxP2 isoforms delineate spatiotemporal transcriptional networks for vocal learning in the zebra finch.
Q34538083	Foxn1 regulates key target genes essential for T cell development in postnatal thymic epithelial cells
Q47619822	Foxp1 in Forebrain Pyramidal Neurons Controls Gene Expression Required for Spatial Learning and Synaptic Plasticity.
Q47402230	Foxp1 regulation of neonatal vocalizations via cortical development.
Q47798147	From Genes to Networks: Characterizing Gene-Regulatory Interactions in Plants
Q38626567	From Saccharomyces cerevisiae to human: The important gene co-expression modules.
Q52808586	From correlation to causation: analysis of metabolomics data using systems biology approaches.
Q28077604	From integrative genomics to systems genetics in the rat to link genotypes to phenotypes
Q36364750	From protein-protein interactions to protein co-expression networks: a new perspective to evaluate large-scale proteomic data
Q39050290	From single-cell to cell-pool transcriptomes: stochasticity in gene expression and RNA splicing.
Q35828508	From the core to beyond the margin: a genomic picture of glioblastoma intratumor heterogeneity.
Q38611043	Frontotemporal dementia: insights into the biological underpinnings of disease through gene co-expression network analysis
Q36908308	Fruit metabolite networks in engineered and non-engineered tomato genotypes reveal fluidity in a hormone and agroecosystem specific manner
Q46263867	Full Genome Survey and Dynamics of Gene Expression in the Greater Amberjack Seriola dumerili.
Q36255382	Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells
Q97551103	Full-length transcriptome sequencing and modular organization analysis of oleanolic acid- and dammarane-type saponin related gene expression patterns in Panax japonicus
Q92172412	Full-length transcriptome sequencing reveals the low-temperature-tolerance mechanism of Medicago falcata roots
Q57170840	Functional Annotation of Caenorhabditis elegans Genes by Analysis of Gene Co-Expression Networks.
Q64992388	Functional Effects of let-7g Expression in Colon Cancer Metastasis.
Q39671363	Functional Genomic Analyses Identify Pathways Dysregulated in Animal Model of Autism
Q58773186	Functional Linkage of RKIP to the Epithelial to Mesenchymal Transition and Autophagy during the Development of Prostate Cancer
Q41184087	Functional Virtual Flow Cytometry: A Visual Analytic Approach for Characterizing Single-Cell Gene Expression Patterns
Q36245292	Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood
Q36244559	Functional changes in mRNA expression and alternative pre-mRNA splicing associated with the effects of nutrition on apoptosis and spermatogenesis in the adult testis.
Q39468520	Functional characterization of drought-responsive modules and genes in Oryza sativa: a network-based approach
Q36473639	Functional divergence and convergence between the transcript network and gene network in lung adenocarcinoma
Q58598813	Functional genomic landscape of acute myeloid leukaemia
Q59086861	Functional genomic landscape of acute myeloid leukaemia
Q94469551	Functional genomics of parental care of insects
Q37825465	Functional genomics of the brain: uncovering networks in the CNS using a systems approach
Q99723633	Functional genomics, genetic risk profiling and cell phenotypes in neurodegenerative disease
Q37695214	Functional interactors of three genome-wide association study genes are differentially expressed in severe chronic obstructive pulmonary disease lung tissue
Q38844039	Functional modules distinguish human induced pluripotent stem cells from embryonic stem cells
Q47345800	Functional network community detection can disaggregate and filter multiple underlying pathways in enrichment analyses
Q55256798	Functional signaling and gene regulatory networks between the oocyte and the surrounding cumulus cells.
Q90091236	Functionally Enigmatic Genes in Cancer: Using TCGA Data to Map the Limitations of Annotations
Q64070779	Fusing gene expressions and transitive protein-protein interactions for inference of gene regulatory networks
Q58743681	G2Vec: Distributed gene representations for identification of cancer prognostic genes
Q38457785	GATA2 as a potential metastasis-driving gene in prostate cancer
Q57465007	GLIS2 redundancy causes chemoresistance and poor prognosis of gastric cancer based on co‑expression network analysis
Q37254476	GLITTER: a web-based application for gene link inspection through tissue-specific coexpression
Q59791283	GPCR-specific autoantibody signatures are associated with physiological and pathological immune homeostasis
Q38614938	GeNET: a web application to explore and share Gene Co-expression Network Analysis data
Q38685044	GeNNet: an integrated platform for unifying scientific workflows and graph databases for transcriptome data analysis
Q64092174	GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes
Q98735774	Gender Differential Transcriptome in Gastric and Thyroid Cancers
Q88770611	Gender-Specific Effects of Selection for Drinking in the Dark on the Network Roles of Coding and Noncoding RNAs
Q38749453	Gene Co-Expression Analysis Predicts Genetic Variants Associated with Drug Responsiveness in Lung Cancer
Q38442142	Gene Co-Expression Network Analysis Reveals the Correlation Patterns Among Genes in Euryhaline Adaptation of Crassostrea gigas
Q36039529	Gene Co-Expression Network Analysis for Identifying Modules and Functionally Enriched Pathways in Type 1 Diabetes.
Q93078947	Gene Co-Expression Networks Restructured Gene Fusion in Rhabdomyosarcoma Cancers
Q33884585	Gene Co-expression Analysis to Characterize Genes Related to Marbling Trait in Hanwoo (Korean) Cattle
Q58795542	Gene Co-expression Network Analysis Suggests the Existence of Transcriptional Modules Containing a High Proportion of Transcriptionally Differentiated Homoeologs in Hexaploid Wheat
Q58580243	Gene Co-expression Network Reveals Potential New Genes Related to Sugarcane Bagasse Degradation in RUT-30
Q92479553	Gene Co-expression Network and Copy Number Variation Analyses Identify Transcription Factors Associated With Multiple Myeloma Progression
Q37147652	Gene Coexpression Analyses Differentiate Networks Associated with Diverse Cancers Harboring TP53 Missense or Null Mutations
Q40368426	Gene Coexpression Networks in Human Brain Developmental Transcriptomes Implicate the Association of Long Noncoding RNAs with Intellectual Disability.
Q57788429	Gene Coexpression Networks in Whole Blood Implicate Multiple Interrelated Molecular Pathways in Obesity in People with Asthma
Q41910814	Gene Coexpression and Evolutionary Conservation Analysis of the Human Preimplantation Embryos
Q58700782	Gene Expression Analysis Reveals Novel Gene Signatures Between Young and Old Adults in Human Prefrontal Cortex
Q39200029	Gene Expression Analysis Through Network Biology: Bioinformatics Approaches
Q41684132	Gene Expression Contributes to the Recent Evolution of Host Resistance in a Model Host Parasite System
Q46160784	Gene Expression Correlated with Severe Asthma Characteristics Reveals Heterogeneous Mechanisms of Severe Disease
Q92224163	Gene Expression Meta-Analysis Reveals Concordance in Gene Activation, Pathway, and Cell-Type Enrichment in Dermatomyositis Target Tissues
Q98386960	Gene Expression Network Analysis of Precursor Lesions in Familial Pancreatic Cancer
Q64079952	Gene Expression Networks Across Multiple Tissues Are Associated with Rates of Molecular Evolution in Wild House Mice
Q64063176	Gene Expression Pattern and Regulatory Network of -Toxin Treatment in
Q35773741	Gene Expression Patterns Associated with Peroxisome Proliferator-activated Receptor (PPAR) Signaling in the Longissimus dorsi of Hanwoo (Korean Cattle).
Q92539318	Gene Expression Profiling of the Shoot Meristematic Tissues in Woodland Strawberry Fragaria vesca
Q38813080	Gene Expression and Pharmacodynamic Changes in 1,760 Systemic Lupus Erythematosus Patients From Two Phase III Trials of BAFF Blockade With Tabalumab
Q38812334	Gene Function Prediction Based on Developmental Transcriptomes of the Two Sexes in C. elegans
Q92502801	Gene Modules Co-regulated with Biosynthetic Gene Clusters for Allelopathy between Rice and Barnyardgrass
Q42654233	Gene Network Construction from Microarray Data Identifies a Key Network Module and Several Candidate Hub Genes in Age-Associated Spatial Learning Impairment
Q35773963	Gene Network Reconstruction by Integration of Prior Biological Knowledge.
Q28550898	Gene Network Rewiring to Study Melanoma Stage Progression and Elements Essential for Driving Melanoma
Q36592480	Gene Networks in the Wild: Identifying Transcriptional Modules that Mediate Coral Resistance to Experimental Heat Stress
Q34657893	Gene age predicts the strength of purifying selection acting on gene expression variation in humans
Q90884734	Gene and lncRNA co-expression network analysis reveals novel ceRNA network for triple-negative breast cancer
Q97652996	Gene biomarker discovery at different stages of Alzheimer using gene co-expression network approach
Q39986354	Gene co-expression analyses: an overview from microarray collections in Arabidopsis thaliana
Q38771720	Gene co-expression analysis for functional classification and gene-disease predictions
Q39000867	Gene co-expression analysis identifies common modules related to prognosis and drug resistance in cancer cell lines.
Q46054363	Gene co-expression network analysis for identifying modules and functionally enriched pathways in SCA2.
Q64234995	Gene co-expression network analysis identifies BRCC3 as a key regulator in osteogenic differentiation of osteoblasts through a β-catenin signaling dependent pathway
Q33805188	Gene co-expression network analysis identifies porcine genes associated with variation in Salmonella shedding
Q33683604	Gene co-expression network analysis identifies porcine genes associated with variation in metabolizing fenbendazole and flunixin meglumine in the liver
Q58739536	Gene co-expression network analysis identifies the hub genes associated with immune functions for nocturnal hemodialysis in patients with end-stage renal disease
Q34151046	Gene co-expression network analysis in Rhodobacter capsulatus and application to comparative expression analysis of Rhodobacter sphaeroides.
Q37632815	Gene co-expression network analysis reveals common system-level properties of prognostic genes across cancer types
Q58778216	Gene co-expression network analysis reveals coordinated regulation of three characteristic secondary biosynthetic pathways in tea plant (Camellia sinensis)
Q90288160	Gene co-expression network analysis reveals key potential gene modules in utero-vaginal junction associated with duration of fertility trait of breeder hens
Q92842140	Gene co-expression network analysis reveals pathways associated with graft healing by asymmetric profiling in tomato
Q99633696	Gene co-expression network analysis to identify critical modules and candidate genes of drought-resistance in wheat
Q91422045	Gene co-expression network approach for predicting prognostic microRNA biomarkers in different subtypes of breast cancer
Q33611013	Gene co-expression network connectivity is an important determinant of selective constraint
Q92621444	Gene co-expression network for analysis of plasma exosomal miRNAs in the elderly as markers of aging and cognitive decline
Q42335717	Gene co-expression network reveals shared modules predictive of stage and grade in serous ovarian cancers
Q90164301	Gene co-expression networks are associated with obesity-related traits in kidney transplant recipients
Q60912399	Gene co-expression networks associated with carcass traits reveal new pathways for muscle and fat deposition in Nelore cattle
Q64115747	Gene co-expression networks contributing to the expression of compensatory growth in metabolically active tissues in cattle
Q60044315	Gene co-expression networks from RNA sequencing of dairy cattle identifies genes and pathways affecting feed efficiency
Q55357098	Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils.
Q34506653	Gene co-expression networks shed light into diseases of brain iron accumulation
Q47868367	Gene co-opening network deciphers gene functional relationships
Q46411328	Gene coexpression modules in human cognition
Q84179075	Gene coexpression network alignment and conservation of gene modules between two grass species: maize and rice
Q31027057	Gene coexpression network analysis as a source of functional annotation for rice genes
Q57296236	Gene coexpression network analysis combined with metabonomics reveals the resistance responses to powdery mildew in Tibetan hulless barley
Q36225994	Gene coexpression network analysis for family studies based on a meta-analytic approach
Q93358710	Gene coexpression network analysis identified potential biomarkers in gestational diabetes mellitus progression
Q43150737	Gene coexpression network analysis of fruit transcriptomes uncovers a possible mechanistically distinct class of sugar/acid ratio-associated genes in sweet orange
Q91643172	Gene coexpression network analysis revealed biomarkers correlated with blast cells and survival in acute myeloid leukemia
Q89848354	Gene coexpression network analysis reveals the role of SRS genes in senescence leaf of maize (Zea mays L.).
Q48115184	Gene coexpression networks reveal key drivers of phenotypic divergence in lake whitefish
Q58116441	Gene correlation network analysis to identify regulatory factors in idiopathic pulmonary fibrosis
Q35440212	Gene expression analyses of the spatio-temporal relationships of human medulloblastoma subgroups during early human neurogenesis
Q35845505	Gene expression analysis at the onset of sex differentiation in turbot (Scophthalmus maximus).
Q63976610	Gene expression analysis delineates the potential roles of multiple interferons in systemic lupus erythematosus
Q89208186	Gene expression and DNA methylation are extensively coordinated with MRI-based brain microstructural characteristics
Q39767049	Gene expression and variation in social aggression by queens of the harvester ant Pogonomyrmex californicus.
Q47574626	Gene expression associated with PTSD in World Trade Center responders: An RNA sequencing study
Q35588285	Gene expression associated with white syndromes in a reef building coral, Acropora hyacinthus
Q38879634	Gene expression atlas of pigeonpea and its application to gain insights into genes associated with pollen fertility implicated in seed formation
Q90408041	Gene expression changes associated with trajectories of psychopathology in a longitudinal cohort of children and adolescents
Q52689460	Gene expression correlated with delay in shell formation in larval Pacific oysters (Crassostrea gigas) exposed to experimental ocean acidification provides insights into shell formation mechanisms.
Q37372402	Gene expression elucidates functional impact of polygenic risk for schizophrenia
Q56909112	Gene expression in cord blood links genetic risk for neurodevelopmental disorders with maternal psychological distress and adverse childhood outcomes
Q35920745	Gene expression in large pedigrees: analytic approaches
Q40904308	Gene expression in major depressive disorder
Q38662093	Gene expression is more strongly influenced by age than caste in the ant Lasius niger.
Q52322966	Gene expression links functional networks across cortex and striatum.
Q38752940	Gene expression markers of Tumor Infiltrating Leukocytes
Q104471841	Gene expression network analysis provides potential targets against SARS-CoV-2
Q90116813	Gene expression networks in the Drosophila Genetic Reference Panel
Q34503376	Gene expression patterns underlying parasite-induced alterations in host behaviour and life history
Q57838493	Gene expression plasticity as a mechanism of coral adaptation to a variable environment
Q45323883	Gene expression profile and long non-coding RNA analysis, using RNA-Seq, in chicken embryonic fibroblast cells infected by avian leukosis virus J.
Q47335647	Gene expression profiles indicate tissue-specific obesity regulation changes and strong obesity relevant tissues.
Q30447546	Gene expression profiling by mRNA sequencing reveals increased expression of immune/inflammation-related genes in the hippocampus of individuals with schizophrenia
Q33523164	Gene expression profiling in C57BL/6J and A/J mouse inbred strains reveals gene networks specific for brain regions independent of genetic background
Q27010353	Gene expression profiling of the brain: pondering facts and fiction
Q104795172	Gene expression profiling-based risk prediction and profiles of immune infiltration in diffuse large B-cell lymphoma
Q63379872	Gene expression shifts in yellow-bellied marmots prior to natal dispersal
Q33698342	Gene expression signatures affected by alcohol-induced DNA methylomic deregulation in human embryonic stem cells
Q42052765	Gene expression signatures affected by ethanol and/or nicotine in normal human normal oral keratinocytes (NHOKs).
Q40126638	Gene expression stasis and plasticity following migration into a foreign environment.
Q90091665	Gene expression variation in the brains of harvester ant foragers is associated with collective behavior
Q90136336	Gene expression vs. sequence divergence: comparative transcriptome sequencing among natural Rhinolophus ferrumequinum populations with different acoustic phenotypes
Q37400410	Gene expression within the extended amygdala of 5 pairs of rat lines selectively bred for high or low ethanol consumption
Q36781924	Gene expression-based modeling of human cortical synaptic density
Q49160956	Gene expression: The autism disconnect.
Q37580206	Gene network analysis reveals a novel 22-gene signature of carbon metabolism in hepatocellular carcinoma
Q90781271	Gene network analysis reveals a role for striatal glutamatergic receptors in dysregulated risk-assessment behavior of autism mouse models
Q30409648	Gene networks and haloperidol-induced catalepsy.
Q30432771	Gene networks associated with conditional fear in mice identified using a systems genetics approach
Q39011229	Gene networks in skeletal muscle following endurance exercise are coexpressed in blood neutrophils and linked with blood inflammation markers.
Q90581579	Gene networks orchestrated by MeGI: a single-factor mechanism underlying sex determination in persimmon
Q38891765	Gene networks show associations with seed region connectivity.
Q36048222	Gene networks specific for innate immunity define post-traumatic stress disorder.
Q90010026	Gene regulatory network analysis with drug sensitivity reveals synergistic effects of combinatory chemotherapy in gastric cancer
Q36424741	Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets
Q90238229	Gene signatures based on therapy responsiveness provide guidance for combined radiotherapy and chemotherapy for lower grade glioma
Q37229987	Gene-expression analysis of clozapine treatment in whole blood of patients with psychosis
Q93105232	GeneFishing to reconstruct context specific portraits of biological processes
Q39117105	GeneNetwork: A Toolbox for Systems Genetics
Q57014990	GeneNetwork: framework for web-based genetics
Q35106202	Generalization of clustering coefficients to signed correlation networks
Q64945982	Generalized gene co-expression analysis via subspace clustering using low-rank representation.
Q48271850	Generation of a microglial developmental index in mice and in humans reveals a sex difference in maturation and immune reactivity.
Q35018812	Genes and co-expression modules common to drought and bacterial stress responses in Arabidopsis and rice
Q38433230	Genes and gene clusters related to genotype and drought-induced variation in saccharification potential, lignin content and wood anatomical traits in Populus nigra†.
Q45075363	Genes and gene networks implicated in aggression related behaviour
Q28650491	Genes associated with ant social behavior show distinct transcriptional and evolutionary patterns
Q104486562	Genes associated with cognitive performance in the Morris water maze: an RNA-seq study
Q28603002	Genes located in a chromosomal inversion are correlated with territorial song in white-throated sparrows
Q37531777	Genes showing altered expression in the medial preoptic area in the highly social maternal phenotype are related to autism and other disorders with social deficits
Q34047556	Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations
Q27309881	Genetic Architecture of Atherosclerosis in Mice: A Systems Genetics Analysis of Common Inbred Strains
Q36069291	Genetic Dissection of Cardiac Remodeling in an Isoproterenol-Induced Heart Failure Mouse Model
Q63433226	Genetic Drivers of Pancreatic Islet Function
Q89977581	Genetic Identification and Transcriptome Analysis of Lintless and Fuzzless Traits in Gossypium arboreum L
Q39297654	Genetic Networks in Mouse Retinal Ganglion Cells
Q64104978	Genetic Regulation of Liver Metabolites and Transcripts Linking to Biochemical-Clinical Parameters
Q104570499	Genetic alterations associated with ¹⁸F-fluorodeoxyglucose positron emission tomography/computed tomography in head and neck squamous cell carcinoma
Q34479695	Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects
Q33753774	Genetic architecture of epigenetic and neuronal ageing rates in human brain regions
Q34101797	Genetic architecture of gene expression in ovine skeletal muscle
Q34549759	Genetic architecture of gene expression in the chicken
Q35081761	Genetic blueprint of the zoonotic pathogen Toxocara canis
Q36206120	Genetic divergence in the transcriptional engram of chronic alcohol abuse: A laser-capture RNA-seq study of the mouse mesocorticolimbic system
Q33722841	Genetic diversity and striatal gene networks: focus on the heterogeneous stock-collaborative cross (HS-CC) mouse
Q34781864	Genetic evidence for a pathogenic role for the vitamin D3 metabolizing enzyme CYP24A1 in multiple sclerosis
Q57253458	Genetic identification and functional validation of FcγRIV as key molecule in autoantibody-induced tissue injury
Q30399799	Genetic influences on brain gene expression in rats selected for tameness and aggression
Q36185463	Genetic locus on mouse chromosome 7 controls elevated heart rate
Q49608512	Genetic modifiers of Mendelian disease: Huntington's disease and the trinucleotide repeat disorders.
Q34079474	Genetic network identifies novel pathways contributing to atherosclerosis susceptibility in the innominate artery
Q90604684	Genetic networks in Parkinson's and Alzheimer's disease
Q92263520	Genetic perturbations of disease risk genes in mice capture transcriptomic signatures of late-onset Alzheimer's disease
Q34360246	Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing
Q34299387	Genetic regulation of mouse liver metabolite levels
Q95320642	Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approach
Q92450224	Genetic regulatory networks for salt-alkali stress in Gossypium hirsutum with differing morphological characteristics
Q92784883	Genetic studies of urinary metabolites illuminate mechanisms of detoxification and excretion in humans
Q91796279	Genetic variability in response to amyloid beta deposition influences Alzheimer's disease risk
Q34511671	Genetic variants near MLST8 and DHX57 affect the epigenetic age of the cerebellum
Q89748201	Genetic variation and evolutionary history of a mycorrhizal fungus regulate the currency of exchange in symbiosis with the food security crop cassava
Q26865707	Genetic, transcriptomic, and epigenetic studies of HIV-associated neurocognitive disorder
Q39613444	Genetically regulated hepatic transcripts and pathways orchestrate haematological, biochemical and body composition traits.
Q97522087	Genome Regulation and Gene Interaction Networks Inferred From Muscle Transcriptome Underlying Feed Efficiency in Pigs
Q64116152	Genome analysis of the rice coral Montipora capitata
Q94561461	Genome and Transcriptome Analyses Provide Insight Into the Omega-3 Long-Chain Polyunsaturated Fatty Acids Biosynthesis of Schizochytrium limacinum SR21
Q95933652	Genome and single-cell RNA-sequencing of the earthworm Eisenia andrei identifies cellular mechanisms underlying regeneration
Q91648311	Genome assembly provides insights into the genome evolution and flowering regulation of orchardgrass
Q30275672	Genome evolution in the allotetraploid frog Xenopus laevis
Q46411478	Genome interplay in the grain transcriptome of hexaploid bread wheat
Q93000172	Genome wide identification and comparative analysis of glutathione transferases (GST) family genes in Brassica napus
Q58698973	Genome wide transcriptome analysis provides bases on colonic mucosal immune system development affected by colostrum feeding strategies in neonatal calves
Q31144431	Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences
Q92991220	Genome-Wide Analysis of Long Non-Coding RNA Profiles in Canine Oral Melanomas
Q36050244	Genome-Wide Analysis of Long Noncoding RNAs and Their Responses to Drought Stress in Cotton (Gossypium hirsutum L.).
Q35754676	Genome-Wide Analysis of PAPS1-Dependent Polyadenylation Identifies Novel Roles for Functionally Specialized Poly(A) Polymerases in Arabidopsis thaliana.
Q93048635	Genome-Wide Analysis of ROS Antioxidant Genes in Resurrection Species Suggest an Involvement of Distinct ROS Detoxification Systems during Desiccation
Q37693515	Genome-Wide Analysis of lncRNA and mRNA Expression During Differentiation of Abdominal Preadipocytes in the Chicken.
Q35909882	Genome-Wide Analysis of the Lysine Biosynthesis Pathway Network during Maize Seed Development
Q92295009	Genome-Wide Association and Gene Co-expression Network Analyses Reveal Complex Genetics of Resistance to Goss's Wilt of Maize
Q90411201	Genome-Wide Epistatic Interaction Networks Affecting Feed Efficiency in Duroc and Landrace Pigs
Q46279393	Genome-Wide Identification and Analysis of MAPK and MAPKK Gene Families in Bread Wheat (Triticum aestivum L.).
Q91928823	Genome-Wide Identification and Characterization of Long Non-Coding RNAs in Peanut
Q36811616	Genome-Wide Identification and Function Analyses of Heat Shock Transcription Factors in Potato
Q35996878	Genome-Wide Identification of the Transcription Factors Involved in Citrus Fruit Ripening from the Transcriptomes of a Late-Ripening Sweet Orange Mutant and Its Wild Type
Q36715730	Genome-Wide Methylation Study Identifies an IL-13-induced Epigenetic Signature in Asthmatic Airways
Q64124135	Genome-Wide Patterns of Gene Expression in a Wild Primate Indicate Species-Specific Mechanisms Associated with Tolerance to Natural Simian Immunodeficiency Virus Infection.
Q38658966	Genome-Wide Sequence and Expression Analysis of the NAC Transcription Factor Family in Polyploid Wheat
Q50553724	Genome-Wide Temporal Profiling of Transcriptome and Open Chromatin of Early Cardiomyocyte Differentiation Derived From hiPSCs and hESCs.
Q98735814	Genome-Wide Transcriptional Analysis Reveals Alternative Splicing Event Profiles in Hepatocellular Carcinoma and Their Prognostic Significance
Q42273391	Genome-scale analysis to identify prognostic markers in patients with early-stage pancreatic ductal adenocarcinoma after pancreaticoduodenectomy.
Q37279487	Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction
Q55513279	Genome-wide Analyses on Single Disease Samples for Potential Biomarkers and Biological Features of Molecular Subtypes: A Case Study in Gastric Cancer.
Q36713357	Genome-wide DNA methylation levels and altered cortisol stress reactivity following childhood trauma in humans
Q92904373	Genome-wide DNA methylation profiling identifies convergent molecular signatures associated with idiopathic and syndromic autism in post-mortem human brain tissue
Q60044492	Genome-wide RNAseq study of the molecular mechanisms underlying microglia activation in response to pathological tau perturbation in the rTg4510 tau transgenic animal model
Q45326308	Genome-wide analysis of Epstein-Barr virus identifies variants and genes associated with gastric carcinoma and population structure
Q37377851	Genome-wide analysis of a Wnt1-regulated transcriptional network implicates neurodegenerative pathways
Q39036735	Genome-wide analysis of blood gene expression in migraine implicates immune-inflammatory pathways
Q35056532	Genome-wide analysis of coordinated transcript abundance during seed development in different Brassica rapa morphotypes
Q46239125	Genome-wide analysis of facial skeletal regionalization in zebrafish.
Q64067932	Genome-wide analysis of long non-coding RNAs unveils the regulatory roles in the heat tolerance of Chinese cabbage (Brassica rapa ssp.chinensis)
Q36024670	Genome-wide analysis of the transcriptional response to porcine reproductive and respiratory syndrome virus infection at the maternal/fetal interface and in the fetus.
Q64239849	Genome-wide analysis of yeast expression data based on a priori generated co-regulation cliques
Q90640733	Genome-wide association analysis of hippocampal volume identifies enrichment of neurogenesis-related pathways
Q47898098	Genome-wide association study of Alzheimer's disease endophenotypes at prediagnosis stages.
Q90294393	Genome-wide association study of maize plant architecture using F1 populations
Q39129795	Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism
Q59793457	Genome-wide characterization and phylogenetic analysis of GSK gene family in three species of cotton: evidence for a role of some GSKs in fiber development and responses to stress
Q90076359	Genome-wide discovery and functional prediction of salt-responsive lncRNAs in duckweed
Q47926307	Genome-wide enrichment of damaging de novo variants in patients with isolated and complex congenital diaphragmatic hernia.
Q41687427	Genome-wide expression and response to exposure-based psychological therapy for anxiety disorders.
Q36565194	Genome-wide identification and characterization of long intergenic noncoding RNAs and their potential association with larval development in the Pacific oyster
Q92418477	Genome-wide identification and characterization of long intergenic noncoding RNAs in the regenerative flatworm Macrostomum lignano
Q41546051	Genome-wide identification and co-expression network analysis provide insights into the roles of auxin response factor gene family in chickpea.
Q57024743	Genome-wide identification and differentially expression analysis of lncRNAs in tilapia
Q30387313	Genome-wide identification and functional analysis of lincRNAs acting as miRNA targets or decoys in maize
Q30755958	Genome-wide identification and functional annotation of Plasmodium falciparum long noncoding RNAs from RNA-seq data
Q36014905	Genome-wide identification and functional prediction of nitrogen-responsive intergenic and intronic long non-coding RNAs in maize (Zea mays L.).
Q59340663	Genome-wide identification of LRR-containing sequences and the response of these sequences to nematode infection in Arachis duranensis
Q103829384	Genome-wide identification of novel long non-coding RNAs and their possible roles in hypoxic zebrafish brain
Q57470294	Genome-wide identification of oil biosynthesis-related long non-coding RNAs in allopolyploid Brassica napus
Q35658904	Genome-wide identification of the Phaseolus vulgaris sRNAome using small RNA and degradome sequencing
Q30389156	Genome-wide identification, characterization and evolutionary analysis of long intergenic noncoding RNAs in cucumber
Q64970181	Genome-wide profiling of the alternative splicing provides insights into development in Plutella xylostella.
Q36622908	Genome-wide survey of interindividual differences of RNA stability in human lymphoblastoid cell lines
Q92722874	Genome-wide transcriptional adaptation to salt stress in Populus
Q33715534	Genome-wide transcriptional analysis of T cell activation reveals differential gene expression associated with psoriasis
Q34685530	Genome-wide transcriptome profiles of rice hybrids and their parents
Q92643616	Genome-wide transcriptomic analysis of a desert willow, Salix psammophila, reveals the function of hub genes SpMDP1 and SpWRKY33 in drought tolerance
Q100558907	Genome-wide translational profiling of amygdala Crh-expressing neurons reveals role for CREB in fear extinction learning
Q38804936	Genome-wide, integrative analysis implicates microRNA dysregulation in autism spectrum disorder.
Q90007425	Genome-wide, integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism
Q38813105	Genomic Analysis Reveals Disruption of Striatal Neuronal Development and Therapeutic Targets in Human Huntington's Disease Neural Stem Cells
Q38602104	Genomic Determinants of Protein Abundance Variation in Colorectal Cancer Cells.
Q37057456	Genomic Effect of Triclosan on the Fetal Hypothalamus: Evidence for Altered Neuropeptide Regulation
Q46281315	Genomic Studies of Local Adaptation in Natural Plant Populations
Q38791499	Genomic analyses identify molecular subtypes of pancreatic cancer
Q98205251	Genomic analyses of a livestock pest, the New World screwworm, find potential targets for genetic control programs
Q96127518	Genomic analyses of early responses to radiation inglioblastoma reveal new alterations at transcription,splicing, and translation levels
Q57282831	Genomic analysis of DNA repair genes and androgen signaling in prostate cancer
Q36292801	Genomic analysis of LPS-stimulated myeloid cells identifies a common pro-inflammatory response but divergent IL-10 anti-inflammatory responses
Q57296600	Genomic analysis of RNA-Seq and sRNA-Seq data identifies potential regulatory sRNAs and their functional roles in Staphylococcus aureus
Q90172850	Genomic and epigenomic mapping of leptin-responsive neuronal populations involved in body weight regulation
Q35533902	Genomic and network patterns of schizophrenia genetic variation in human evolutionary accelerated regions
Q91943158	Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity
Q64880518	Genomic approaches for the elucidation of genes and gene networks underlying cardiovascular traits.
Q41944661	Genomic basis of evolutionary change: evolving immunity
Q59793212	Genomic identification and functional analysis of essential genes in Caenorhabditis elegans
Q41176225	Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species.
Q33831022	Genomic responses during acute human anaphylaxis are characterized by upregulation of innate inflammatory gene networks
Q26781985	Genomic, Proteomic, and Metabolomic Data Integration Strategies
Q35193783	Genomics of homoploid hybrid speciation: diversity and transcriptional activity of long terminal repeat retrotransposons in hybrid sunflowers
Q38445066	Genomics of the Effect of Spinal Cord Stimulation on an Animal Model of Neuropathic Pain.
Q101051150	Genotype by environment interaction for gene expression in Drosophila melanogaster
Q41696808	Geochemical and Microbial Community Attributes in Relation to Hyporheic Zone Geological Facies.
Q35226568	Geographical, environmental and pathophysiological influences on the human blood transcriptome.
Q57281301	Geospatial variation in co-occurrence networks of nitrifying microbial guilds
Q46718483	Germline Chd8 haploinsufficiency alters brain development in mouse.
Q92734918	Gestational and lactational exposure to gossypol alters the testis transcriptome
Q102388697	Gestational diabetes induces behavioral and brain gene transcription dysregulation in adult offspring
Q92266384	Glial gene networks associated with alcohol dependence
Q35058891	Glioma-associated microglia/macrophages display an expression profile different from M1 and M2 polarization and highly express Gpnmb and Spp1.
Q55237213	Global DNA methylation changes spanning puberty are near predicted estrogen-responsive genes and enriched for genes involved in endocrine and immune processes.
Q50055990	Global MicroRNA Profiling in Human Bone Marrow Skeletal-Stromal or Mesenchymal-Stem Cells Identified Candidates for Bone Regeneration.
Q64111011	Global Responses of Resistant and Susceptible Sorghum () to Sugarcane Aphid ()
Q92106885	Global Transcriptome Profiling of Multiple Porcine Organs Reveals Toxoplasma gondii-Induced Transcriptional Landscapes
Q93155722	Global Transcriptome and Co-Expression Network Analysis Reveal Contrasting Response of Japonica and Indica Rice Cultivar to γ Radiation
Q33851469	Global developmental gene expression and pathway analysis of normal brain development and mouse models of human neuronal migration defects
Q58605653	Global dissection of alternative splicing uncovers transcriptional diversity in tissues and associates with the flavonoid pathway in tea plant (Camellia sinensis)
Q33678602	Global gene expression profiling of healthy human brain and its application in studying neurological disorders.
Q35813228	Global identification and analysis of long non-coding RNAs in diploid strawberry Fragaria vesca during flower and fruit development
Q55172634	Global isoform-specific transcript alterations and deregulated networks in clear cell renal cell carcinoma.
Q92914432	Global landscape and genetic regulation of RNA editing in cortical samples from individuals with schizophrenia
Q58604110	Global long non-coding RNA expression in the rostral anterior cingulate cortex of depressed suicides
Q42281559	Global misregulation of genes largely uncoupled to DNA methylome epimutations characterizes a congenital overgrowth syndrome.
Q55031216	Global quantitative analysis of the human brain proteome in Alzheimer's and Parkinson's Disease.
Q47861364	Global spectral clustering in dynamic networks
Q38871843	Global transcription network incorporating distal regulator binding reveals selective cooperation of cancer drivers and risk genes
Q55408760	Global transcriptome analysis identifies weight regain-induced activation of adaptive immune responses in white adipose tissue of mice.
Q92209819	Global transcriptome analysis uncovers the gene co-expression regulation network and key genes involved in grain development of wheat (Triticum aestivum L.).
Q47204438	Global transcriptome and coexpression network analyses reveal cultivar-specific molecular signatures associated with seed development and seed size/weight determination in chickpea.
Q57459831	Global transcriptome and weighted gene co-expression network analyses reveal hybrid-specific modules and candidate genes related to plant height development in maize
Q35545338	Global transcriptomic analysis of model human cell lines exposed to surface-modified gold nanoparticles: the effect of surface chemistry
Q52667662	Gonad Transcriptome Analysis of the Pacific Oyster Crassostrea gigas Identifies Potential Genes Regulating the Sex Determination and Differentiation Process.
Q90432984	Grape-RNA: A Database for the Collection, Evaluation, Treatment, and Data Sharing of Grape RNA-Seq Datasets
Q93050229	Grapevine comparative early transcriptomic profiling suggests that Flavescence dorée phytoplasma represses plant responses induced by vector feeding in susceptible varieties
Q39110019	Graph reconstruction using covariance-based methods
Q30874969	Graphical algorithm for integration of genetic and biological data: proof of principle using psoriasis as a model
Q34222307	Grasping nettles: cellular heterogeneity and other confounders in epigenome-wide association studies
Q47121717	Guanylate-binding protein-1 is a potential new therapeutic target for triple-negative breast cancer.
Q92598938	Guide for library design and bias correction for large-scale transcriptome studies using highly multiplexed RNAseq methods
Q59794342	Gut microbial features can predict host phenotype response to protein deficiency
Q98952094	Gut microbiota in human metabolic health and disease
Q97636579	Gut transcriptomic changes during hibernation in the greater horseshoe bat (Rhinolophus ferrumequinum)
Q27300184	H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups.
Q39745524	H2S Regulates Hypobaric Hypoxia-Induced Early Glio-Vascular Dysfunction and Neuro-Pathophysiological Effects
Q90185432	HNF1A recruits KDM6A to activate differentiated acinar cell programs that suppress pancreatic cancer
Q92708909	HPO-Shuffle: an associated gene prioritization strategy and its application in drug repurposing for the treatment of canine epilepsy
Q91586511	Habitual aerobic exercise and circulating proteomic patterns in healthy adults: relation to indicators of healthspan
Q36162702	Heat Stress and Lipopolysaccharide Stimulation of Chicken Macrophage-Like Cell Line Activates Expression of Distinct Sets of Genes
Q92234775	Heat shock transcription factor 1 regulates the fetal γ-globin expression in a stress-dependent and independent manner during erythroid differentiation
Q93105595	Hepatic arginase deficiency fosters dysmyelination during postnatal CNS development
Q35924335	Hepatic circadian clock oscillators and nuclear receptors integrate microbiome-derived signals
Q92256710	Hepatitis C Virus as a Unique Human Model Disease to Define Differences in the Transcriptional Landscape of T Cells in Acute versus Chronic Infection
Q55188283	Heterogeneity of interactions of microbial communities in regions of Taihu Lake with different nutrient loadings: A network analysis.
Q38679084	Heterogeneous Enhancement Patterns of Tumor-adjacent Parenchyma at MR Imaging Are Associated with Dysregulated Signaling Pathways and Poor Survival in Breast Cancer
Q35921619	Heterozygous Mapping Strategy (HetMappS) for High Resolution Genotyping-By-Sequencing Markers: A Case Study in Grapevine
Q90152487	Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear
Q40145946	Hierarchical cortical transcriptome disorganization in autism
Q97423450	High Expression of the SH3TC2-DT/SH3TC2 Gene Pair Associated With FLT3 Mutation and Poor Survival in Acute Myeloid Leukemia: An Integrated TCGA Analysis
Q90354637	High expression of WTAP leads to poor prognosis of gastric cancer by influencing tumour-associated T lymphocyte infiltration
Q36165004	High motivation for exercise is associated with altered chromatin regulators of monoamine receptor gene expression in the striatum of selectively bred mice
Q90044637	High throughput circRNA sequencing analysis reveals novel insights into the mechanism of nitidine chloride against hepatocellular carcinoma
Q93176480	High-Throughput Identification of the Plasma Proteomic Signature of Inflammatory Bowel Disease
Q38502304	High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions
Q89473684	High-depth transcriptomic profiling reveals the temporal gene signature of human mesenchymal stem cells during chondrogenesis
Q30855219	High-dose maternal folic acid supplementation before conception impairs reversal learning in offspring mice
Q57825254	High-resolution analysis of the pneumococcal transcriptome under a wide range of infection-relevant conditions
Q48162641	High-resolution spatiotemporal transcriptome mapping of tomato fruit development and ripening.
Q37461558	High-throughput allele-specific expression across 250 environmental conditions
Q42778297	Highly-interwoven communities of a gene regulatory network unveil topologically important genes for maize seed development.
Q30431925	Hippocampal gene expression analysis highlights Ly6a/Sca-1 as candidate gene for previously mapped novelty induced behaviors in mice
Q92029384	Honey bee (Apis mellifera) larval pheromones may regulate gene expression related to foraging task specialization
Q40889609	Honey bee microRNAs respond to infection by the microsporidian parasite Nosema ceranae
Q91638651	Host Gender and Androgen Levels Regulate Gut Bacterial Taxa in Pigs Leading to Sex-Biased Serum Metabolite Profiles
Q43152991	Host Transcription Profile In Nasal Epithelium And Whole Blood of Hospitalised Children under two years of age with Respiratory Syncytial Virus Infection
Q35662278	Host Transcriptional Response to Influenza and Other Acute Respiratory Viral Infections--A Prospective Cohort Study
Q64228485	Host Transcriptomics as a Tool to Identify Diagnostic and Mechanistic Immune Signatures of Tuberculosis
Q64259059	Host and microbiome multi-omics integration: applications and methodologies
Q34001122	Host genetic factors predisposing to HIV-associated neurocognitive disorder
Q35363365	Host regulatory network response to infection with highly pathogenic H5N1 avian influenza virus
Q39022184	Host-Microbial Interactions in Idiopathic Pulmonary Fibrosis.
Q64914368	Hotspots in the genomic architecture of field drought responses in wheat as breeding targets.
Q90220210	How to interpret and integrate multi-omics data at systems level
Q40813909	How to make DNA methylome wide association studies more powerful
Q35215591	Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses
Q104130647	Hub gene identification and prognostic model construction for isocitrate dehydrogenase mutation in glioma
Q91806634	Human 3D cellular model of hypoxic brain injury of prematurity
Q49552044	Human C-to-U coding RNA editing is largely nonadaptive.
Q92642267	Human Colon Mucosal Biofilms and Murine Host Communicate via Altered mRNA and microRNA Expression during Cancer
Q42650630	Human Kidney Tubule-Specific Gene Expression Based Dissection of Chronic Kidney Disease Traits
Q64954152	Human Pluripotent Stem Cell-Derived Multipotent Vascular Progenitors of the Mesothelium Lineage Have Utility in Tissue Engineering and Repair.
Q34294495	Human gene correlation analysis (HGCA): a tool for the identification of transcriptionally co-expressed genes
Q34475549	Human genomics. The human transcriptome across tissues and individuals
Q34534015	Human gut microbes impact host serum metabolome and insulin sensitivity
Q42365504	Human hepatic gene expression signature of non-alcoholic fatty liver disease progression, a meta-analysis
Q56798178	Human neuroepithelial stem cell regional specificity enables spinal cord repair through a relay circuit
Q89093053	Human-specific features of spatial gene expression and regulation in eight brain regions
Q34535959	Huntington's disease accelerates epigenetic aging of human brain and disrupts DNA methylation levels
Q29248581	Huntington’s disease blood and brain show a common gene expression pattern and share an immune signature with Alzheimer’s disease
Q93153929	Hybrid analysis of gene dynamics predicts context-specific expression and offers regulatory insights
Q90482488	Hypermethylated long noncoding RNA MEG3 promotes the progression of gastric cancer
Q33813393	Hypermethylation in the ZBTB20 gene is associated with major depressive disorder
Q37137148	Hypomethylation coordinates antagonistically with hypermethylation in cancer development: a case study of leukemia
Q90666150	Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions
Q47777505	IL-10 Signaling Remodels Adipose Chromatin Architecture to Limit Thermogenesis and Energy Expenditure
Q46257233	IL-11 is a crucial determinant of cardiovascular fibrosis.
Q41958265	IL-32 is a molecular marker of a host defense network in human tuberculosis.
Q42314942	INTEGRATIVE ANALYSIS FOR LUNG ADENOCARCINOMA PREDICTS MORPHOLOGICAL FEATURES ASSOCIATED WITH GENETIC VARIATIONS.
Q37641863	INsPeCT: INtegrative Platform for Cancer Transcriptomics.
Q95319800	IRE1α and IGF signaling predict resistance to an endoplasmic reticulum stress-inducing drug in glioblastoma cells
Q90480462	IRF1 association with tumor immune microenvironment and use as a diagnostic biomarker for colorectal cancer recurrence
Q62838139	IRIS-EDA: An integrated RNA-Seq interpretation system for gene expression data analysis
Q89464808	ISG20 serves as a potential biomarker and drives tumor progression in clear cell renal cell carcinoma
Q95276604	Identification Hub Genes in Colorectal Cancer by Integrating Weighted Gene Co-Expression Network Analysis and Clinical Validation in vivo and vitro
Q52584412	Identification and Functional Analysis of Long Intergenic Non-coding RNAs Underlying Intramuscular Fat Content in Pigs.
Q38909882	Identification and Functional Prediction of Large Intergenic Noncoding RNAs (lincRNAs) in Rainbow Trout (Oncorhynchus mykiss).
Q39064979	Identification and Network-Enabled Characterization of Auxin Response Factor Genes in Medicago truncatula.
Q98465793	Identification and Validation of Key Genes Associated With Systemic Sclerosis-Related Pulmonary Hypertension
Q60910559	Identification and analysis of long non-coding RNAs in response to H5N1 influenza viruses in duck (Anas platyrhynchos)
Q47101917	Identification and characterization of conserved lncRNAs in human and rat brain
Q55401273	Identification and characterization of functional modules reflecting transcriptome transition during human neuron maturation.
Q38432407	Identification and evaluation of lncRNA and mRNA integrative modules in human peripheral blood mononuclear cells.
Q54979784	Identification and functional analysis of a core gene module associated with hepatitis C virus-induced human hepatocellular carcinoma progression.
Q38637387	Identification and functional analysis of a potential key lncRNA involved in fat loss of cancer cachexia.
Q37475955	Identification and functional analysis of long intergenic noncoding RNA genes in porcine pre-implantation embryonic development
Q31122545	Identification and functional analysis of long non-coding RNAs in human and mouse early embryos based on single-cell transcriptome data
Q30857112	Identification and functional analysis of long non-coding RNAs in mouse cleavage stage embryonic development based on single cell transcriptome data
Q89544625	Identification and functional annotation of metabolism-associated lncRNAs and their related protein-coding genes in gastric cancer
Q64084126	Identification and prioritization of gene sets associated with schizophrenia risk by co-expression network analysis in human brain
Q58763356	Identification and replication of RNA-Seq gene network modules associated with depression severity
Q34431409	Identification and replication of a combined epigenetic and genetic biomarker predicting suicide and suicidal behaviors.
Q92541105	Identification and validation of a three-gene signature as a candidate prognostic biomarker for lower grade glioma
Q89966739	Identification and validation of key modules and hub genes associated with the pathological stage of oral squamous cell carcinoma by weighted gene co-expression network analysis
Q96231220	Identification and validation of m6A RNA methylation regulators with clinical prognostic value in Papillary thyroid cancer
Q90380072	Identification of 13 Key Genes Correlated With Progression and Prognosis in Hepatocellular Carcinoma by Weighted Gene Co-expression Network Analysis
Q92681977	Identification of 9 key genes and small molecule drugs in clear cell renal cell carcinoma
Q48168940	Identification of AUXIN RESPONSE FACTOR gene family from Prunus sibirica and its expression analysis during mesocarp and kernel development
Q52714414	Identification of Biomarkers Associated With Pathological Stage and Prognosis of Clear Cell Renal Cell Carcinoma by Co-expression Network Analysis.
Q47136689	Identification of Biomarkers Correlated with the TNM Staging and Overall Survival of Patients with Bladder Cancer.
Q92110410	Identification of Biomarkers for Controlling Cancer Stem Cell Characteristics in Bladder Cancer by Network Analysis of Transcriptome Data Stemness Indices
Q98302976	Identification of C3 as a therapeutic target for diabetic nephropathy by bioinformatics analysis
Q90266267	Identification of Candidate Adaxial-Abaxial-Related Genes Regulating Petal Expansion During Flower Opening in Rosa chinensis "Old Blush"
Q60046833	Identification of Candidate Genes and Regulatory Factors Underlying Intramuscular Fat Content Through Longissimus Dorsi Transcriptome Analyses in Heavy Iberian Pigs
Q27310913	Identification of Chemical Inhibitors of β-Catenin-Driven Liver Tumorigenesis in Zebrafish
Q37721245	Identification of Circular RNAs in Kiwifruit and Their Species-Specific Response to Bacterial Canker Pathogen Invasion
Q35900448	Identification of Crowding Stress Tolerance Co-Expression Networks Involved in Sweet Corn Yield
Q94545563	Identification of Crucial Genes Associated With Immune Cell Infiltration in Hepatocellular Carcinoma by Weighted Gene Co-expression Network Analysis
Q60046136	Identification of Crucial Genes and Pathways in Human Arrhythmogenic Right Ventricular Cardiomyopathy by Coexpression Analysis
Q42700303	Identification of DNA methylation associated gene signatures in endometrial cancer via integrated analysis of DNA methylation and gene expression systematically.
Q93054534	Identification of Distinct Immune Subtypes in Colorectal Cancer Based on the Stromal Compartment
Q98465785	Identification of Ear Morphology Genes in Maize (Zea mays L.) Using Selective Sweeps and Association Mapping
Q92068655	Identification of Four Pathological Stage-Relevant Genes in Association with Progression and Prognosis in Clear Cell Renal Cell Carcinoma by Integrated Bioinformatics Analysis
Q98735803	Identification of Gene Signatures for Diagnosis and Prognosis of Hepatocellular Carcinomas Patients at Early Stage
Q89849762	Identification of Genes Associated with the Metastasis of Pheochromocytoma/Paraganglioma Based on Weighted Gene Coexpression Network Analysis
Q96304645	Identification of Hub Genes Associated With Development of Head and Neck Squamous Cell Carcinoma by Integrated Bioinformatics Analysis
Q93087996	Identification of Hub Genes and Key Pathways Associated With Bipolar Disorder Based on Weighted Gene Co-expression Network Analysis
Q90378482	Identification of Hub Genes in High-Grade Serous Ovarian Cancer Using Weighted Gene Co-Expression Network Analysis
Q98466181	Identification of Immune-Related Prognostic Genes and LncRNAs Biomarkers Associated With Osteosarcoma Microenvironment
Q99711628	Identification of KIF18B as a Hub Candidate Gene in the Metastasis of Clear Cell Renal Cell Carcinoma by Weighted Gene Co-expression Network Analysis
Q37694805	Identification of KLK10 as a therapeutic target to reverse trastuzumab resistance in breast cancer
Q90471130	Identification of Key Components in Colon Adenocarcinoma Using Transcriptome to Interactome Multilayer Framework
Q48290693	Identification of Key Gene Modules in Human Osteosarcoma by Co-Expression Analysis Weighted Gene Co-Expression Network Analysis (WGCNA).
Q38810789	Identification of Key Gene Modules of Neuropathic Pain by Co-Expression Analysis.
Q90746274	Identification of Key Gene and Pathways for the Prediction of Peritoneal Metastasis of Gastric Cancer by Co-expression Analysis
Q50002028	Identification of Key Pathways and Genes in the Dynamic Progression of HCC Based on WGCNA.
Q64087529	Identification of Key lncRNAs Associated With Atherosclerosis Progression Based on Public Datasets
Q64071579	Identification of Long Non-coding and Messenger RNAs Differentially Expressed Between Primary and Metastatic Melanoma
Q90451401	Identification of Long Noncoding RNAs as Predictors of Survival in Triple-Negative Breast Cancer Based on Network Analysis
Q99578690	Identification of Metastasis-Associated Genes in Triple-Negative Breast Cancer Using Weighted Gene Co-expression Network Analysis
Q37742959	Identification of MicroRNA Targets of Capsicum spp. Using MiRTrans-a Trans-Omics Approach
Q92543187	Identification of Modules With Similar Gene Regulation and Metabolic Functions Based on Co-expression Data
Q92445865	Identification of Novel Pathways Associated with Patterned Cerebellar Purkinje Neuron Degeneration in Niemann-Pick Disease, Type C1
Q47584579	Identification of Novel Potentially Pleiotropic Variants Associated With Osteoporosis and Obesity Using the cFDR Method
Q35805965	Identification of Photosynthesis-Associated C4 Candidate Genes through Comparative Leaf Gradient Transcriptome in Multiple Lineages of C3 and C4 Species.
Q38698148	Identification of Potential Gene Network Associated with HCV-Related Hepatocellular Carcinoma Using Microarray Analysis
Q61798662	Identification of Pre-symptomatic Gene Signatures That Predict Resilience to Cognitive Decline in the Genetically Diverse AD-BXD Model
Q92422004	Identification of Prognostic Candidate Genes in Breast Cancer by Integrated Bioinformatic Analysis
Q89966137	Identification of Prognostic Genes in Leiomyosarcoma by Gene Co-Expression Network Analysis
Q90706141	Identification of RAD54 homolog B as a promising therapeutic target for breast cancer
Q64108572	Identification of RE1-Silencing Transcription Factor as a Promoter of Metastasis in Pancreatic Cancer
Q91635386	Identification of Susceptibility Genes to Allergic Rhinitis by Gene Expression Data Sets
Q95819348	Identification of Susceptibility Modules and Genes for Cardiovascular Disease in Diabetic Patients Using WGCNA Analysis
Q64936273	Identification of Temporal Characteristic Networks of Peripheral Blood Changes in Alzheimer's Disease Based on Weighted Gene Co-expression Network Analysis.
Q52723073	Identification of The Aberrantly Expressed LncRNAs in Hepatocellular Carcinoma: A Bioinformatics Analysis Based on RNA-sequencing.
Q37027880	Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq
Q38681074	Identification of Transcriptional Modules and Key Genes in Chickens Infected with Salmonella enterica Serovar Pullorum Using Integrated Coexpression Analyses
Q28600863	Identification of Unknown Carboxydovore Bacteria Dominant in Deciduous Forest Soil via Succession of Bacterial Communities, coxL Genotypes, and Carbon Monoxide Oxidation Activity in Soil Microcosms
Q98177819	Identification of a Six-Immune-Related Long Non-coding RNA Signature for Predicting Survival and Immune Infiltrating Status in Breast Cancer
Q90053618	Identification of a Specific Gene Module for Predicting Prognosis in Glioblastoma Patients
Q91708327	Identification of a Tumor Microenvironment-Related Eight-Gene Signature for Predicting Prognosis in Lower-Grade Gliomas
Q98386364	Identification of a five-gene signature for predicting the progression and prognosis of stage I endometrial carcinoma
Q30450935	Identification of a gene module associated with BMD through the integration of network analysis and genome-wide association data
Q92289159	Identification of a key gene module associated with glucocorticoid- induced derangement in bone mineral density in patients with asthma
Q90458993	Identification of a master transcription factor and a regulatory mechanism for desiccation tolerance in the anhydrobiotic cell line Pv11
Q60918540	Identification of a metabolomic signature associated with feed efficiency in beef cattle
Q90628882	Identification of a systemic interferon-γ inducible antimicrobial gene signature in leprosy patients undergoing reversal reaction
Q28647185	Identification of a transporter Slr0982 involved in ethanol tolerance in cyanobacterium Synechocystis sp. PCC 6803
Q60301328	Identification of alterations in macrophage activation associated with disease activity in systemic lupus erythematosus
Q38296544	Identification of altered metabolic pathways of γ-irradiated rice mutant via network-based transcriptome analysis
Q34937996	Identification of bicluster regions in a binary matrix and its applications
Q90706187	Identification of biomarkers associated with histological grade and prognosis of gastric cancer by co-expression network analysis
Q58715363	Identification of biomarkers for Barcelona Clinic Liver Cancer staging and overall survival of patients with hepatocellular carcinoma
Q94475251	Identification of biomarkers for the transition from low-grade glioma to secondary glioblastoma by an integrated bioinformatic analysis
Q92734808	Identification of biomarkers in common chronic lung diseases by co-expression networks and drug-target interactions analysis
Q60044421	Identification of biomarkers of chromophobe renal cell carcinoma by weighted gene co-expression network analysis
Q89818680	Identification of biomarkers related to CD8+ T cell infiltration with gene co-expression network in clear cell renal cell carcinoma
Q37392646	Identification of breast cancer candidate genes using gene co-expression and protein-protein interaction information
Q38429989	Identification of breast cancer mechanism based on weighted gene coexpression network analysis
Q38747762	Identification of candidate anti-cancer molecular mechanisms of Compound Kushen Injection using functional genomics.
Q92737923	Identification of candidate genes and miRNAs associated with neuropathic pain induced by spared nerve injury
Q42378509	Identification of candidate genes related to pancreatic cancer based on analysis of gene co-expression and protein-protein interaction network
Q33805258	Identification of candidate long non-coding RNAs in response to myocardial infarction
Q52789821	Identification of candidate miRNA biomarkers for pancreatic ductal adenocarcinoma by weighted gene co-expression network analysis.
Q92967236	Identification of clinical trait-related lncRNA and mRNA biomarkers with weighted gene co-expression network analysis as useful tool for personalized medicine in ovarian cancer
Q28248944	Identification of co-expression gene networks, regulatory genes and pathways for obesity based on adipose tissue RNA Sequencing in a porcine model
Q64118908	Identification of co-expression modules and pathways correlated with osteosarcoma and its metastasis
Q55278931	Identification of common coexpression modules based on quantitative network comparison.
Q35416341	Identification of common regulators of genes in co-expression networks affecting muscle and meat properties
Q38951594	Identification of core gene networks and hub genes associated with progression of non-alcoholic fatty liver disease by RNA sequencing.
Q92582109	Identification of critical genes associated with human osteosarcoma metastasis based on integrated gene expression profiling
Q64229225	Identification of critical genes associated with spinal cord injury based on the gene expression profile of spinal cord tissues from trkB.T1 knockout mice
Q55024946	Identification of crucial genes associated with esophageal squamous cell carcinoma by gene expression profile analysis.
Q90681870	Identification of crucial genes in abdominal aortic aneurysm by WGCNA
Q41345354	Identification of crucial genes in intracranial aneurysm based on weighted gene coexpression network analysis
Q33921579	Identification of differential co-expressed gene networks in early rheumatoid arthritis achieving sustained drug-free remission after treatment with a tocilizumab-based or methotrexate-based strategy
Q92659897	Identification of differentially expressed genes and signaling pathways in chronic obstructive pulmonary disease via bioinformatic analysis
Q89341611	Identification of differentially expressed genes associated with asthma in children based on the bioanalysis of the regulatory network
Q57173326	Identification of differentially expressed genes in cervical cancer by bioinformatics analysis
Q92382353	Identification of differentially expressed genes in the endothelial precursor cells of patients with type 2 diabetes mellitus by bioinformatics analysis
Q64247702	Identification of differentially expressed proteins in the injured lung from zinc chloride smoke inhalation based on proteomics analysis
Q58751826	Identification of differentially methylated region (DMR) networks associated with progression of nonalcoholic fatty liver disease
Q64089316	Identification of drought responsive proteins and related proteomic QTLs in barley
Q92648859	Identification of dynamic molecular networks in peripheral blood mononuclear cells in type 1 diabetes mellitus
Q100490716	Identification of epilepsy-associated neuronal subtypes and gene expression underlying epileptogenesis
Q63988407	Identification of evolutionarily conserved gene networks mediating neurodegenerative dementia
Q91725079	Identification of five hub genes as monitoring biomarkers for breast cancer metastasis in silico
Q50003436	Identification of gene expression models for laryngeal squamous cell carcinoma using co-expression network analysis.
Q89637471	Identification of gene modules associated with survival of diffuse large B-cell lymphoma treated with CHOP-based chemotherapy
Q37468244	Identification of genes and signaling pathways associated with diabetic neuropathy using a weighted correlation network analysis: A consort study
Q91850866	Identification of genes associated with clinicopathological features of colorectal cancer
Q64271784	Identification of genes underlying phenotypic plasticity of wing size via insulin signaling pathway by network-based analysis in Sogatella furcifera
Q58078986	Identification of glioblastoma gene prognosis modules based on weighted gene co-expression network analysis
Q58084948	Identification of highly connected and differentially expressed gene subnetworks in metastasizing endometrial cancer
Q39034589	Identification of highly connected hub genes in the protective response program of human macrophages and microglia activated by alpha B-crystallin
Q90708616	Identification of hub genes and construction of transcriptional regulatory network for the progression of colon adenocarcinoma hub genes and TF regulatory network of colon adenocarcinoma
Q93026747	Identification of hub genes and key pathways associated with angioimmunoblastic T-cell lymphoma using weighted gene co-expression network analysis
Q91994598	Identification of hub genes in papillary thyroid carcinoma: robust rank aggregation and weighted gene co-expression network analysis
Q91883633	Identification of hub genes in prostate cancer using robust rank aggregation and weighted gene co-expression network analysis
Q28396973	Identification of hub genes of pneumocyte senescence induced by thoracic irradiation using weighted gene co‑expression network analysis
Q47111601	Identification of hub genes related to silicone-induced immune response in rats
Q90187524	Identification of hub methylated-CpG sites and associated genes in oral squamous cell carcinoma
Q47099037	Identification of hub miRNA biomarkers for bladder cancer by weighted gene coexpression network analysis
Q49233912	Identification of human age-associated gene co-expressions in functional modules using liquid association.
Q92512470	Identification of hyper-rewired genomic stress non-oncogene addiction genes across 15 cancer types
Q90699443	Identification of key gene modules and hub genes of human mantle cell lymphoma by coexpression network analysis
Q47420879	Identification of key gene modules and pathways of human breast cancer by co-expression analysis
Q90402119	Identification of key gene modules and transcription factors for human osteoarthritis by weighted gene co-expression network analysis
Q55313513	Identification of key gene modules for human osteosarcoma by co-expression analysis.
Q104486494	Identification of key gene networks controlling organic acid and sugar metabolism during watermelon fruit development by integrating metabolic phenotypes and gene expression profiles
Q57490008	Identification of key gene pathways and coexpression networks of islets in human type 2 diabetes
Q96348697	Identification of key genes and modules in response to Cadmium stress in different rice varieties and stem nodes by weighted gene co-expression network analysis
Q89666655	Identification of key genes and pathways associated with esophageal squamous cell carcinoma development based on weighted gene correlation network analysis
Q37720176	Identification of key genes and pathways associated with spinal cord injury
Q51737515	Identification of key genes and pathways in human clear cell renal cell carcinoma (ccRCC) by co-expression analysis.
Q64229250	Identification of key genes and pathways involved in microsatellite instability in colorectal cancer
Q98210293	Identification of key genes and pathways involved in vitiligo development based on integrated analysis
Q33675020	Identification of key genes associated with Schmid-type metaphyseal chondrodysplasia based on microarray data
Q89684479	Identification of key genes controlling breast cancer stem cell characteristics via stemness indices analysis
Q40491544	Identification of key genes for laryngeal squamous cell carcinoma using weighted co-expression network analysis
Q92738058	Identification of key genes in osteosarcoma by meta‑analysis of gene expression microarray
Q96950443	Identification of key genes in ruptured atherosclerotic plaques by weighted gene correlation network analysis
Q92382516	Identification of key genes involved in the development and progression of early-onset colorectal cancer by co-expression network analysis
Q64084578	Identification of key lncRNAs contributing to diabetic nephropathy by gene co-expression network analysis
Q92541315	Identification of key modules and hub genes for small-cell lung carcinoma and large-cell neuroendocrine lung carcinoma by weighted gene co-expression network analysis of clinical tissue-proteomes
Q90087530	Identification of key modules and prognostic markers in adrenocortical carcinoma by weighted gene co-expression network analysis
Q93140614	Identification of key pathways and genes in different types of chronic kidney disease based on WGCNA
Q91956240	Identification of lncRNA TRPM2-AS/miR-140-3p/PYCR1 axis's proliferates and anti-apoptotic effect on breast cancer using co-expression network analysis
Q90268194	Identification of lncRNA-associated differential subnetworks in oesophageal squamous cell carcinoma by differential co-expression analysis
Q47123132	Identification of lncRNAs involved in biological regulation in early age-related macular degeneration
Q94603121	Identification of microRNA-mRNA regulatory networks and pathways related to retinoblastoma across human and mouse
Q91805309	Identification of molecular correlations of RBM8A with autophagy in Alzheimer's disease
Q90571127	Identification of new molecular targets for PET imaging of the microglial anti-inflammatory activation state
Q42697456	Identification of new protein-protein and protein-DNA interactions linked with wood formation in Populus trichocarpa.
Q61807574	Identification of new regulators through transcriptome analysis that regulate anthocyanin biosynthesis in apple leaves at low temperatures
Q91634157	Identification of novel biomarkers affecting the metastasis of colorectal cancer through bioinformatics analysis and validation through qRT-PCR
Q64248019	Identification of novel candidate indicators for assessing zinc status during pregnancy in mice from microarray data
Q37362541	Identification of novel long non-coding RNAs deregulated in hepatocellular carcinoma using RNA-sequencing.
Q90569836	Identification of pancreatic cancer type related factors by Weighted Gene Co-Expression Network Analysis
Q64939319	Identification of potential biomarkers of vaccine inflammation in mice.
Q58779792	Identification of potential functional genes in papillary thyroid cancer by co-expression network analysis
Q90273651	Identification of potential novel biomarkers to differentiate malignant thyroid nodules with cytological indeterminate
Q47127695	Identification of potential transcriptomic markers in developing pediatric sepsis: a weighted gene co-expression network analysis and a case-control validation study.
Q93140000	Identification of prognosis-related alternative splicing events in kidney renal clear cell carcinoma
Q36297470	Identification of prognostic genes in kidney renal clear cell carcinoma by RNA‑seq data analysis
Q38429281	Identification of prognostic markers of high grade prostate cancer through an integrated bioinformatics approach.
Q91596383	Identification of prognostic markers of lung cancer through bioinformatics analysis and in vitro experiments
Q38918089	Identification of protein complexes that bind to histone H3 combinatorial modifications using super-SILAC and weighted correlation network analysis
Q93107615	Identification of putative drought-responsive genes in rice using gene co-expression analysis
Q55429283	Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits.
Q33675267	Identification of regulatory networks and hub genes controlling soybean seed set and size using RNA sequencing analysis.
Q47152584	Identification of regulatory role of DNA methylation in colon cancer gene expression via systematic bioinformatics analysis
Q64262310	Identification of survival‑associated key genes and long non‑coding RNAs in glioblastoma multiforme by weighted gene co‑expression network analysis
Q64075683	Identification of the Biomarkers and Pathological Process of Osteoarthritis: Weighted Gene Co-expression Network Analysis
Q36039259	Identification of the MicroRNA Repertoire in TLR-Ligand Challenged Bubaline PBMCs as a Model of Bacterial and Viral Infection
Q92856562	Identification of the Molecular Events Involved in the Development of Prefrontal Cortex Through the Analysis of RNA-Seq Data From BrainSpan
Q40340780	Identification of the crucial genes in the elimination and survival process of Salmonella enterica ser. Pullorum in the chicken spleen
Q47615586	Identification of the genomic region under epigenetic regulation during non-alcoholic fatty liver disease progression.
Q92680612	Identification of three m6A-related mRNAs signature and risk score for the prognostication of hepatocellular carcinoma
Q90076396	Identification of tissue-specific and cold-responsive lncRNAs in Medicago truncatula by high-throughput RNA sequencing
Q64964306	Identification of two molecular subtypes in canine mast cell tumours through gene expression profiling.
Q42378362	Identification of two novel biomarkers of rectal carcinoma progression and prognosis via co-expression network analysis
Q36184494	Identification, characterization, and gene expression analysis of nucleotide binding site (NB)-type resistance gene homologues in switchgrass
Q47094988	Identifications of potential therapeutic targets and drugs in angiotensin II-induced hypertension
Q47245987	Identify bilayer modules via pseudo-3D clustering: applications to miRNA-gene bilayer networks
Q47105288	Identify clear cell renal cell carcinoma related genes by gene network
Q35550027	Identify the signature genes for diagnose of uveal melanoma by weight gene co-expression network analysis
Q94545572	Identifying Candida albicans Gene Networks Involved in Pathogenicity
Q64097838	Identifying Hub Genes for Heat Tolerance in Water Buffalo () Using Transcriptome Data
Q91671025	Identifying Key Genes and Functionally Enriched Pathways in Sjögren's Syndrome by Weighted Gene Co-Expression Network Analysis
Q92134548	Identifying Long Non-coding RNA of Prostate Cancer Associated With Radioresponse by Comprehensive Bioinformatics Analysis
Q90152217	Identifying Tumorigenesis and Prognosis-Related Genes of Lung Adenocarcinoma: Based on Weighted Gene Coexpression Network Analysis
Q37579127	Identifying a gene expression signature of cluster headache in blood
Q33709494	Identifying biomarkers of papillary renal cell carcinoma associated with pathological stage by weighted gene co-expression network analysis
Q37369098	Identifying breast cancer subtype related miRNAs from two constructed miRNAs interaction networks in silico method
Q60035848	Identifying core biological processes distinguishing human eye tissues with precise systems-level gene expression analyses and weighted correlation networks
Q33364869	Identifying gene coexpression networks underlying the dynamic regulation of wood-forming tissues in Populus under diverse environmental conditions
Q37386392	Identifying gene networks underlying the neurobiology of ethanol and alcoholism
Q33837764	Identifying global expression patterns and key regulators in epithelial to mesenchymal transition through multi-study integration
Q38434343	Identifying key genes in rheumatoid arthritis by weighted gene co-expression network analysis
Q54957585	Identifying miRNA and gene modules of colon cancer associated with pathological stage by weighted gene co-expression network analysis.
Q33658608	Identifying modules of coexpressed transcript units and their organization of Saccharopolyspora erythraea from time series gene expression profiles
Q55514730	Identifying osteosarcoma metastasis associated genes by weighted gene co-expression network analysis (WGCNA).
Q90087506	Identifying prognosis and metastasis-associated genes associated with Ewing sarcoma by weighted gene co-expression network analysis
Q36720921	Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila
Q98771175	Immune Landscape of the Tumor Microenvironment Identifies Prognostic Gene Signature CD4/CD68/CSF1R in Osteosarcoma
Q37629959	Immune markers associated with host susceptibility to infection with West Nile virus
Q98176985	Immune network dysregulation precedes clinical diagnosis of asthma
Q37223293	Immune signatures and disorder-specific patterns in a cross-disorder gene expression analysis
Q27318642	Immune-Mediated Inflammation May Contribute to the Pathogenesis of Cardiovascular Disease in Mucopolysaccharidosis Type I
Q64962407	Immune-centric network of cytokines and cells in disease context identified by computational mining of PubMed.
Q94948311	Immune-profiling of ZIKV-infected patients identifies a distinct function of plasmacytoid dendritic cells for immune cross-regulation
Q89657329	Immune-related key gene CLDN10 correlates with lymph node metastasis but predicts favorable prognosis in papillary thyroid carcinoma
Q38626906	Immuno-Oncology Integrative Networks: Elucidating the Influences of Osteosarcoma Phenotypes
Q104283016	Immunogenetic and tolerance strategies against a novel parasitoid of wild field crickets
Q98771279	Immunogenomic Profiling and Classification of Prostate Cancer Based on HIF-1 Signaling Pathway
Q93033026	Immunological Fingerprints of Controllers Developing Neutralizing HIV-1 Antibodies
Q92479100	Immunomodulatory Effects and Induction of Apoptosis by Different Molecular Weight Chitosan Oligosaccharides in Head Kidney Macrophages From Blunt Snout Bream (Megalobrama amblycephala)
Q89900376	Immunosuppressive effect and global dysregulation of blood transcriptome in response to psychosocial stress in vervet monkeys (Chlorocebus sabaeus)
Q28716374	Impact of experience-dependent and -independent factors on gene expression in songbird brain
Q112652083	Impaired phosphocreatine metabolism in white adipocytes promotes inflammation
Q92128420	Improved cell composition deconvolution method of bulk gene expression profiles to quantify subsets of immune cells
Q31135416	Improved pose and affinity predictions using different protocols tailored on the basis of data availability
Q42696721	Improved prediction of breast cancer outcome by identifying heterogeneous biomarkers
Q102388753	Improving existing analysis pipeline to identify and analyze cancer driver genes using multi-omics data
Q57072532	In Search of Biomarkers for Pathogenesis and Control of Leishmaniasis by Global Analyses of -Infected Macrophages
Q92635914	In Silico Analysis of the Age-Dependent Evolution of the Transcriptome of Mouse Skin Stem Cells
Q92383002	In silico identification of EP400 and TIA1 as critical transcription factors involved in human hepatocellular carcinoma relapse
Q36837816	In silico methods for drug repurposing and pharmacology
Q64118794	In vitro expansion affects the response of human bone marrow stromal cells to irradiation
Q38747098	In vitro production of baculoviruses: identifying host and virus genes associated with high productivity.
Q92081709	In vivo cellular and molecular study on duck spleen infected by duck Tembusu virus
Q91106520	In vivo generation of haematopoietic stem/progenitor cells from bone marrow-derived haemogenic endothelium
Q92502071	In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner
Q92919416	In-silico Prediction of Synergistic Anti-Cancer Drug Combinations Using Multi-omics Data
Q57183603	Incorporating EBO-HSIC with SVM for Gene Selection Associated with Cervical Cancer Classification
Q64078722	Incorporating Pathway Information into Feature Selection towards Better Performed Gene Signatures
Q37549999	Increased burden of deleterious variants in essential genes in autism spectrum disorder
Q47653114	Increased correlation between methylation sites in epigenome-wide replication studies: impact on analysis and results
Q37057279	Indexing Effects of Copy Number Variation on Genes Involved in Developmental Delay
Q47108434	Individual-specific edge-network analysis for disease prediction
Q47134420	Inducible and reversible phenotypes in a novel mouse model of Friedreich's Ataxia
Q35810427	Induction of a common microglia gene expression signature by aging and neurodegenerative conditions: a co-expression meta-analysis.
Q37643500	Induction of fibroblast senescence generates a non-fibrogenic myofibroblast phenotype that differentially impacts on cancer prognosis
Q41686902	Inference and interrogation of a coregulatory network in the context of lipid accumulation in Yarrowia lipolytica
Q47127340	Inference of Transcription Regulatory Network in Low Phytic Acid Soybean Seeds
Q90066003	Inferring Causal Gene Regulatory Networks from Coupled Single-Cell Expression Dynamics Using Scribe
Q93089768	Inferring Interaction Networks From Multi-Omics Data
Q38022502	Inferring gene functions through dissection of relevance networks: interleaving the intra- and inter-species views
Q30979399	Inferring interaction type in gene regulatory networks using co-expression data
Q30980125	Inferring pathway dysregulation in cancers from multiple types of omic data
Q64063713	Inflammatory, regulatory, and autophagy co-expression modules and hub genes underlie the peripheral immune response to human intracerebral hemorrhage
Q64056518	Inflation vs. Exhaustion of Antiviral CD8+ T-Cell Populations in Persistent Infections: Two Sides of the Same Coin?
Q35787028	Influence of Wastewater Discharge on the Metabolic Potential of the Microbial Community in River Sediments.
Q47103360	Influence of socioeconomic status on the whole blood transcriptome in African Americans
Q37719183	Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity
Q40121698	Inherent Oxidative Stress in Lewis Rat is Associated with Resistance to Toxoplasmosis
Q92026275	Inhibition of DNA Repair Mechanisms and Induction of Apoptosis in Triple Negative Breast Cancer Cells Expressing the Human Herpesvirus 6 U94
Q92757626	Inhibition of GATA2 restrains cell proliferation and enhances apoptosis and chemotherapy mediated apoptosis in human GATA2 overexpressing AML cells
Q36967938	Inhibition of fatty acid oxidation as a therapy for MYC-overexpressing triple-negative breast cancer
Q64092496	Initial findings of striatum tripartite model in OCD brain samples based on transcriptome analysis
Q56871556	Innate immune activity as a predictor of persistent insulin secretion and association with responsiveness to CTLA4-Ig treatment in recent-onset type 1 diabetes
Q59071784	Innate immune memory in the brain shapes neurological disease hallmarks
Q35747030	Insights from cerebellar transcriptomic analysis into the pathogenesis of ataxia
Q30655347	Insights into TREM2 biology by network analysis of human brain gene expression data
Q42282703	Insights into beta cell regeneration for diabetes via integration of molecular landscapes in human insulinomas.
Q38793458	Insights into the Ecology and Evolution of Polyploid Plants through Network Analysis
Q104282983	Insights into the genetic basis of predator-induced response in Daphnia galeata
Q98943883	Insights into the resistance of a synthetically-derived wheat to Septoria tritici blotch disease: less is more
Q39064328	Instructing Perisomatic Inhibition by Direct Lineage Reprogramming of Neocortical Projection Neurons
Q92246986	Integrated Analysis Revealed Prognostic Factors for Prostate Cancer Patients
Q92861898	Integrated Analysis of Methylome and Transcriptome Changes Reveals the Underlying Regulatory Signatures Driving Curly Wool Transformation in Chinese Zhongwei Goats
Q92998238	Integrated Analysis of Oncogenic Networks in Colorectal Cancer Identifies GUCA2A as a Molecular Marker
Q91973750	Integrated Analysis to Evaluate the Prognostic Value of Signature mRNAs in Glioblastoma Multiforme
Q92020937	Integrated DNA methylation analysis reveals a potential role for ANKRD30B in Williams syndrome
Q47118613	Integrated DNA methylome and transcriptome analysis reveals the ethylene-induced flowering pathway genes in pineapple
Q99238498	Integrated PPI- and WGCNA-Retrieval of Hub Gene Signatures Shared Between Barrett's Esophagus and Esophageal Adenocarcinoma
Q39636313	Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.
Q50099893	Integrated Systems Approach Reveals Sphingolipid Metabolism Pathway Dysregulation in Association with Late-Onset Alzheimer's Disease.
Q27307083	Integrated Systems Biology Analysis of Transcriptomes Reveals Candidate Genes for Acidity Control in Developing Fruits of Sweet Orange (Citrus sinensis L. Osbeck).
Q58795465	Integrated Systems Biology Approach Identifies Novel Maternal and Placental Pathways of Preeclampsia
Q50305761	Integrated TCGA analysis implicates lncRNA CTB-193M12.5 as a prognostic factor in lung adenocarcinoma.
Q91649930	Integrated Transcriptome Analyses and Experimental Verifications of Mesenchymal-Associated TNFRSF1A as a Diagnostic and Prognostic Biomarker in Gliomas
Q61807455	Integrated Transcriptome Analysis Reveals Plant Hormones Jasmonic Acid and Salicylic Acid Coordinate Growth and Defense Responses upon Fungal Infection in Poplar
Q92092227	Integrated analyses of murine breast cancer models reveal critical parallels with human disease
Q36722123	Integrated analysis of DNA methylation profiles and gene expression profiles to identify genes associated with pilocytic astrocytomas
Q90712414	Integrated analysis of co-expression and ceRNA network identifies five lncRNAs as prognostic markers for breast cancer
Q36304737	Integrated analysis of genetic, behavioral, and biochemical data implicates neural stem cell-induced changes in immunity, neurotransmission and mitochondrial function in Dementia with Lewy Body mice.
Q64106068	Integrated analysis of lncRNA and mRNA repertoires in Marek's disease infected spleens identifies genes relevant to resistance
Q41133916	Integrated analysis of long non-coding RNAs in human colorectal cancer
Q38608109	Integrated analysis of long non-coding RNAs in human gastric cancer: An in silico study.
Q48183332	Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human preimplantation epiblast
Q90381949	Integrated analysis of the proteome and transcriptome in a MCAO mouse model revealed the molecular landscape during stroke progression
Q47607708	Integrated approach reveals diet, APOE genotype and sex affect immune response in APP mice
Q98164533	Integrated bioinformatics analysis to decipher molecular mechanism of compound Kushen injection for esophageal cancer by combining WGCNA with network pharmacology
Q92683580	Integrated bioinformatics analysis to identify 15 hub genes in breast cancer
Q89601287	Integrated characterisation of cancer genes identifies key molecular biomarkers in stomach adenocarcinoma
Q35779338	Integrated cross-species transcriptional network analysis of metastatic susceptibility
Q89766647	Integrated functional genomic analyses of Klinefelter and Turner syndromes reveal global network effects of altered X chromosome dosage
Q45835957	Integrated gene co-expression network analysis in the growth phase of Mycobacterium tuberculosis reveals new potential drug targets.
Q53435219	Integrated genomic analysis identifies clinically relevant subtypes of renal clear cell carcinoma.
Q34503475	Integrated genomic characterization of IDH1-mutant glioma malignant progression
Q42377420	Integrated genomic characterization of cancer genes in glioma
Q46306829	Integrated genomics and proteomics define huntingtin CAG length-dependent networks in mice.
Q33748270	Integrated genomics of susceptibility to alkylator-induced leukemia in mice
Q33555505	Integrated host and viral transcriptome analyses reveal pathology and inflammatory response mechanisms to ALV-J injection in SPF chickens
Q47928059	Integrated mRNAseq and microRNAseq data analysis for grade III gliomas
Q95328312	Integrated multi-omics approaches to improve classification of chronic kidney disease
Q55491020	Integrated multifactor analysis explores core dysfunctional modules in autism spectrum disorder.
Q35693163	Integrated network analysis and logistic regression modeling identify stage-specific genes in Oral Squamous Cell Carcinoma
Q47215682	Integrated omics dissection of proteome dynamics during cardiac remodeling
Q56374652	Integrated pathogen load and dual transcriptome analysis of systemic host-pathogen interactions in severe malaria
Q52680958	Integrated proteomics and network analysis identifies protein hubs and network alterations in Alzheimer's disease.
Q91595979	Integrated single-cell analysis of multicellular immune dynamics during hyperacute HIV-1 infection
Q56980099	Integrated systems analysis reveals conserved gene networks underlying response to spinal cord injury
Q47161742	Integrated transcriptional analysis unveils the dynamics of cellular differentiation in the developing mouse hippocampus
Q104486492	Integrated transcriptome and proteome analysis provides insight into chilling-induced dormancy breaking in Chimonanthus praecox
Q52584734	Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in Helicoverpa armigera.
Q89882349	Integrated transcriptomic correlation network analysis identifies COPD molecular determinants
Q92864397	Integrating Clinical and Genetic Analysis of Perineural Invasion in Head and Neck Squamous Cell Carcinoma
Q52576149	Integrating Genetic and Gene Co-expression Analysis Identifies Gene Networks Involved in Alcohol and Stress Responses.
Q90516082	Integrating Mouse and Human Genetic Data to Move beyond GWAS and Identify Causal Genes in Cholesterol Metabolism
Q55237555	Integrating Phylogenetic and Network Approaches to Study Gene Family Evolution: The Case of the AGAMOUS Family of Floral Genes.
Q31114011	Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens
Q64087016	Integrating gene regulatory pathways into differential network analysis of gene expression data
Q91556024	Integrating genetic, transcriptional, and biological information provides insights into obesity
Q31026902	Integrating heterogeneous genomic data to accurately identify disease subtypes
Q35779290	Integrating mRNA and miRNA Weighted Gene Co-Expression Networks with eQTLs in the Nucleus Accumbens of Subjects with Alcohol Dependence
Q90076534	Integrating transcriptomic network reconstruction and eQTL analyses reveals mechanistic connections between genomic architecture and Brassica rapa development
Q39312670	Integration of Metabolic Modeling with Gene Co-expression Reveals Transcriptionally Programmed Reactions Explaining Robustness in Mycobacterium tuberculosis.
Q91927768	Integration of Metabolite Profiling and Transcriptome Analysis Reveals Genes Related to Volatile Terpenoid Metabolism in Finger Citron (C. medica var. sarcodactylis)
Q92879319	Integration of Metabolomic and Other Omics Data in Population-Based Study Designs: An Epidemiological Perspective
Q91375322	Integration of Metabolomics and Transcriptomics to Identify Gene-Metabolite Relationships Specific to Phenotype
Q47649722	Integration of Multi-omics Data from Mouse Diversity Panel Highlights Mitochondrial Dysfunction in Non-alcoholic Fatty Liver Disease
Q58765380	Integration of gene interaction information into a reweighted random survival forest approach for accurate survival prediction and survival biomarker discovery
Q42075255	Integration of heterogeneous molecular networks to unravel gene-regulation in Mycobacterium tuberculosis
Q38735199	Integration of metabolomic and transcriptomic networks in pregnant women reveals biological pathways and predictive signatures associated with preeclampsia
Q21559493	Integration of miRNA and protein profiling reveals coordinated neuroadaptations in the alcohol-dependent mouse brain
Q88727919	Integration of miRNA weighted gene co-expression network and miRNA-mRNA co-expression analyses reveals potential regulatory functions of miRNAs in calf rumen development
Q92827746	Integration of molecular features with clinical information for predicting outcomes for neuroblastoma patients
Q47849155	Integration of multi-omics data for integrative gene regulatory network inference
Q38443626	Integration of omic networks in a developmental atlas of maize.
Q57034339	Integration of small RNAs and transcriptome sequencing uncovers a complex regulatory network during vernalization and heading stages of orchardgrass (Dactylis glomerata L.)
Q37344138	Integration of small RNAs, degradome and transcriptome sequencing in hyperaccumulator Sedum alfredii uncovers a complex regulatory network and provides insights into cadmium phytoremediation.
Q88680129	Integration of summary data from GWAS and eQTL studies identified novel causal BMD genes with functional predictions
Q36411970	Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.).
Q94564497	Integrative Analysis for Elucidating Transcriptomics Landscapes of Glucocorticoid-Induced Osteoporosis
Q92335909	Integrative Analysis of Axolotl Gene Expression Data from Regenerative and Wound Healing Limb Tissues
Q31147704	Integrative Analysis of Genetic, Genomic, and Phenotypic Data for Ethanol Behaviors: A Network-Based Pipeline for Identifying Mechanisms and Potential Drug Targets
Q92855835	Integrative Analysis of Genomic and Clinical Data Reveals Intrinsic Characteristics of Bladder Urothelial Carcinoma Progression
Q31036058	Integrative Analysis of Genomics and Transcriptome Data to Identify Potential Functional Genes of BMDs in Females
Q55130393	Integrative Analysis of Hippocampus Gene Expression Profiles Identifies Network Alterations in Aging and Alzheimer's Disease.
Q47390282	Integrative Analysis of Histopathological Images and Genomic Data Predicts Clear Cell Renal Cell Carcinoma Prognosis
Q90380099	Integrative Analysis of MicroRNA and Gene Interactions for Revealing Candidate Signatures in Prostate Cancer
Q64236733	Integrative Analysis of Transcriptome and GWAS Data to Identify the Hub Genes Associated With Milk Yield Trait in Buffalo
Q38925495	Integrative Diffusion-Weighted Imaging and Radiogenomic Network Analysis of Glioblastoma multiforme
Q89081238	Integrative Genome-Wide Analysis of Long Noncoding RNAs in Diverse Immune Cell Types of Melanoma Patients
Q64102103	Integrative Genomics Analysis Unravels Tissue-Specific Pathways, Networks, and Key Regulators of Blood Pressure Regulation
Q36624682	Integrative Genomics Identifies Novel Associations with APOL1 Risk Genotypes in Black NEPTUNE Subjects
Q104581352	Integrative Multi-omics Analyses of Barley Rootzones under Salinity Stress Reveal Two Distinctive Salt Tolerance Mechanisms
Q28828676	Integrative Network-based Analysis of Magnetic Resonance Spectroscopy and Genome Wide Expression in Glioblastoma multiforme
Q90747804	Integrative Transcriptomics Reveals Sexually Dimorphic Control of the Cholinergic/Neurokine Interface in Schizophrenia and Bipolar Disorder
Q40723884	Integrative analyses of RNA editing, alternative splicing, and expression of young genes in human brain transcriptome by deep RNA sequencing
Q92102896	Integrative analyses of noncoding RNAs reveal the potential mechanisms augmenting tumor malignancy in lung adenocarcinoma
Q36742137	Integrative analyses reveal signaling pathways underlying familial breast cancer susceptibility
Q41995142	Integrative analysis associates monocytes with insufficient erythropoiesis during acute Plasmodium cynomolgi malaria in rhesus macaques
Q64243298	Integrative analysis based on survival associated co-expression gene modules for predicting Neuroblastoma patients' survival time
Q92423757	Integrative analysis identifies DNMTs against immune-infiltrating neutrophils and dendritic cells in colorectal cancer
Q64269688	Integrative analysis of cancer driver genes in prostate adenocarcinoma
Q64290412	Integrative analysis of h-prune as a potential therapeutic target for hepatocellular carcinoma
Q54997338	Integrative analysis of imaging and transcriptomic data of the immune landscape associated with tumor metabolism in lung adenocarcinoma: Clinical and prognostic implications.
Q47132751	Integrative analysis of lncRNAs and miRNAs with coding RNAs associated with ceRNA crosstalk network in triple negative breast cancer
Q49589296	Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle.
Q64923537	Integrative analysis of promising molecular biomarkers and pathways for coronary artery disease using WGCNA and MetaDE methods.
Q37696197	Integrative analysis of protein-coding and non-coding RNAs identifies clinically relevant subtypes of clear cell renal cell carcinoma
Q99726449	Integrative analysis of the common genetic characteristics in ovarian cancer stem cells sorted by multiple approaches
Q90119669	Integrative analysis of the contribution of mRNAs and long non‑coding RNAs to the pathogenesis of asthma
Q91906469	Integrative analysis of the lncRNA-associated ceRNA network reveals lncRNAs as potential prognostic biomarkers in human muscle-invasive bladder cancer
Q38578618	Integrative analysis of the microbiome and metabolome of the human intestinal mucosal surface reveals exquisite inter-relationships
Q53060409	Integrative analysis of transcriptome and miRNome unveils the key regulatory connections involved in different stages of hepatocellular carcinoma.
Q34645531	Integrative analysis of young genes, positively selected genes and lncRNAs in the development of Drosophila melanogaster
Q89881557	Integrative analysis suggests cell type-specific decoding of NF-κB dynamics
Q48262750	Integrative approach using liver and duodenum RNA-Seq data identifies candidate genes and pathways associated with feed efficiency in pigs.
Q52569173	Integrative bioinformatics analysis characterizing the role of EDC3 in mRNA decay and its association to intellectual disability.
Q38431040	Integrative functional analyses using rainbow trout selected for tolerance to plant diets reveal nutrigenomic signatures for soy utilization without the concurrence of enteritis
Q53089247	Integrative functional genomic delineation of the cascades of transcriptional changes involved in hepatocellular carcinoma progression.
Q36386434	Integrative genomic analyses for identification and prioritization of long non-coding RNAs associated with autism.
Q92212269	Integrative genomic analysis identified common regulatory networks underlying the correlation between coronary artery disease and plasma lipid levels
Q91804654	Integrative genomic and transcriptomic analysis of genetic markers in Dupuytren's disease
Q99727518	Integrative genomics identifies a convergent molecular subtype that links epigenomic with transcriptomic differences in autism
Q37961088	Integrative genomics strategies to elucidate the complexity of drug response
Q38429229	Integrative model of leukocyte genomics and organ dysfunction in heart failure patients requiring mechanical circulatory support: a prospective observational study
Q89909200	Integrative module analysis of HCC gene expression landscapes
Q45903187	Integrative mouse and human mRNA studies using WGCNA nominates novel candidate genes involved in the pathogenesis of major depressive disorder.
Q92483940	Integrative network analysis identifies cell-specific trans regulators of m6A
Q38712993	Integrative network analysis identifies novel drivers of pathogenesis and progression in newly diagnosed multiple myeloma.
Q37383525	Integrative network analysis of nineteen brain regions identifies molecular signatures and networks underlying selective regional vulnerability to Alzheimer's disease
Q58558680	Integrative network analysis reveals biological pathways associated with Williams syndrome
Q35154573	Integrative network analysis reveals different pathophysiological mechanisms of insulin resistance among Caucasians and African Americans
Q35577186	Integrative network analysis reveals molecular mechanisms of blood pressure regulation
Q33987965	Integrative network biology: graph prototyping for co-expression cancer networks
Q35651869	Integrative network-based approach identifies key genetic elements in breast invasive carcinoma
Q98157812	Integrative omics analysis identifies differential biological pathways that are associated with regional grey matter volume changes in major depressive disorder
Q31072766	Integrative prescreening in analysis of multiple cancer genomic studies
Q36193399	Integrative transcriptome network analysis of iPSC-derived neurons from schizophrenia and schizoaffective disorder patients with 22q11.2 deletion
Q36210375	Inter-Tissue Gene Co-Expression Networks between Metabolically Healthy and Unhealthy Obese Individuals
Q52564638	Interactions Among Host-Parasite MicroRNAs During Nosema ceranae Proliferation in Apis mellifera.
Q39673717	Interactions between the colonic transcriptome, metabolome, and microbiome in mouse models of obesity-induced intestinal cancer.
Q42366134	Interactions between the tumor and the blood systemic response of breast cancer patients.
Q35634220	Interferon regulatory factor 7 is a major hub connecting interferon-mediated responses in virus-induced asthma exacerbations in vivo
Q101564358	Intergenerational trauma is associated with expression alterations in glucocorticoid- and immune-related genes
Q47226867	Interhemispheric gene expression differences in the cerebral cortex of humans and macaque monkeys
Q35754594	Interleukin 21 Controls mRNA and MicroRNA Expression in CD40-Activated Chronic Lymphocytic Leukemia Cells
Q45992923	Interplay of neuronal and non-neuronal genes regulates intestinal DAF-16-mediated immune response during Fusarium infection of Caenorhabditis elegans.
Q54220496	Intestinal microbial-derived sphingolipids are inversely associated with childhood food allergy.
Q90363301	Intracellular Metabolites in Marine Microorganisms during an Experiment Evaluating Microbial Mortality
Q41203311	Intracoronary Imaging, Cholesterol Efflux, and Transcriptomics after Intensive Statin Treatment in Diabetes
Q27318089	Intrahepatic Transcriptional Signature Associated with Response to Interferon-α Treatment in the Woodchuck Model of Chronic Hepatitis B
Q34996434	Invariance and plasticity in the Drosophila melanogaster metabolomic network in response to temperature
Q37028150	Investigating the Combinatory Effects of Biological Networks on Gene Co-expression
Q60960507	Investigation into the underlying molecular mechanisms of white adipose tissue through comparative transcriptome analysis of multiple tissues
Q92664957	Investigation into the underlying regulatory mechanisms shaping inflorescence architecture in Chenopodium quinoa
Q90451181	Investigation of Potential Genetic Biomarkers and Molecular Mechanism of Ulcerative Colitis Utilizing Bioinformatics Analysis
Q91714035	Investigation of miRNA and mRNA Co-expression Network in Ependymoma
Q90706120	Investigation of miRNA- and lncRNA-mediated competing endogenous RNA network in cholangiocarcinoma
Q50025095	Involvement of an ABI-like protein and a Ca2+-ATPase in drought tolerance as revealed by transcript profiling of a sweetpotato somatic hybrid and its parents Ipomoea batatas (L.) Lam. and I. triloba L.
Q52605255	Involvement of dysregulated coding and long non‑coding RNAs in the pathogenesis of strabismus.
Q33723516	Is human blood a good surrogate for brain tissue in transcriptional studies?
Q33809355	Is my network module preserved and reproducible?
Q87929725	Islet proteomics reveals genetic variation in dopamine production resulting in altered insulin secretion
Q92652905	Isoproterenol-Induced Cardiac Diastolic Dysfunction in Mice: A Systems Genetics Analysis
Q89497053	Joint Detection of Associations between DNA Methylation and Gene Expression from Multiple Cancers
Q36383096	Joint Transcriptomic and Metabolomic Analyses Reveal Changes in the Primary Metabolism and Imbalances in the Subgenome Orchestration in the Bread Wheat Molecular Response to Fusarium graminearum.
Q64105864	Joint bioinformatics analysis of underlying potential functions of hsa-let-7b-5p and core genes in human glioma
Q38453662	Joint genetic and network analyses identify loci associated with root growth under NaCl stress in Arabidopsis thaliana
Q52578588	KDiamend: a package for detecting key drivers in a molecular ecological network of disease.
Q91783105	KIAA0101 is a novel transcriptional target of FoxM1 and is involved in the regulation of hepatocellular carcinoma microvascular invasion by regulating epithelial-mesenchymal transition
Q90002242	KIAA1199, a Target of MicoRNA-486-5p, Promotes Papillary Thyroid Cancer Invasion by Influencing Epithelial-Mesenchymal Transition (EMT)
Q90591938	Kcnn2 blockade reverses learning deficits in a mouse model of fetal alcohol spectrum disorders
Q34645685	Key regulators in prostate cancer identified by co-expression module analysis
Q33561604	Klinefelter syndrome comorbidities linked to increased X chromosome gene dosage and altered protein interactome activity
Q92127777	Knowledge Base Commons (KBCommons) v1.1: a universal framework for multi-omics data integration and biological discoveries
Q58582704	LASSO‑based Cox‑PH model identifies an 11‑lncRNA signature for prognosis prediction in gastric cancer
Q92542085	LDHA Promotes Oral Squamous Cell Carcinoma Progression Through Facilitating Glycolysis and Epithelial-Mesenchymal Transition
Q31150071	LEAP: constructing gene co-expression networks for single-cell RNA-sequencing data using pseudotime ordering.
Q36240643	LPS-induced modules of co-expressed genes in equine peripheral blood mononuclear cells
Q42374101	LSTrAP: efficiently combining RNA sequencing data into co-expression networks
Q37723648	Laminar and temporal expression dynamics of coding and noncoding RNAs in the mouse neocortex
Q96131671	Landscape of immune cell gene expression is unique in predominantly WHO grade 1 skull base meningiomas when compared to convexity
Q55497398	Landscape of transcription and long non-coding RNAs reveals new insights into the inflammatory and fibrotic response following ventilator-induced lung injury.
Q59330124	Large scale study of anti-sense regulation by differential network analysis
Q93351051	Large-scale associations between the leukocyte transcriptome and BOLD responses to speech differ in autism early language outcome subtypes
Q42775735	Large-scale coding sequence change underlies the evolution of postdevelopmental novelty in honey bees.
Q36180621	Large-scale gene co-expression network as a source of functional annotation for cattle genes
Q36309654	Large-scale gene network analysis reveals the significance of extracellular matrix pathway and homeobox genes in acute myeloid leukemia: an introduction to the Pigengene package and its applications
Q34947143	Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network
Q64067746	Large-scale proteomic analysis of human brain identifies proteins associated with cognitive trajectory in advanced age
Q90281256	Laser Microdissection-Based Tissue-Specific Transcriptome Analysis Reveals a Novel Regulatory Network of Genes Involved in Heat-Induced Grain Chalk in Rice Endosperm
Q34573831	Laser microdissection and microarray analysis of Tuber melanosporum ectomycorrhizas reveal functional heterogeneity between mantle and Hartig net compartments
Q27015436	Learning from Co-expression Networks: Possibilities and Challenges
Q64097376	Lenvatinib plus anti-PD-1 antibody combination treatment activates CD8+ T cells through reduction of tumor-associated macrophage and activation of the interferon pathway
Q28602250	Leucocyte subset-specific type 1 interferon signatures in SLE and other immune-mediated diseases
Q60958207	Leveraging Multilayered "Omics" Data for Atopic Dermatitis: A Road Map to Precision Medicine
Q91670973	Leveraging User-Friendly Network Approaches to Extract Knowledge From High-Throughput Omics Datasets
Q28487433	Leveraging non-targeted metabolite profiling via statistical genomics
Q47764362	Light and Plastid Signals Regulate Different Sets of Genes in the Albino Mutant Pap7-1.
Q90065635	Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
Q34436386	Limited sex-biased neural gene expression patterns across strains in Zebrafish (Danio rerio)
Q102369415	Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum
Q64098068	Linking Binary Gene Relationships to Drivers of Renal Cell Carcinoma Reveals Convergent Function in Alternate Tumor Progression Paths
Q99576114	Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
Q40010542	Linking the T cell receptor to the single cell transcriptome in antigen-specific human T cells
Q38758778	Lithium-responsive genes and gene networks in bipolar disorder patient-derived lymphoblastoid cell lines
Q99562197	Liver Pyruvate Kinase Promotes NAFLD/NASH in both Mice and Humans in a Sex-Specific Manner
Q64105214	Liver proteomics unravel the metabolic pathways related to Feed Efficiency in beef cattle
Q27316949	Liver transcriptomic networks reveal main biological processes associated with feed efficiency in beef cattle.
Q34173509	Liverome: a curated database of liver cancer-related gene signatures with self-contained context information
Q48138610	Lnc2Catlas: an atlas of long noncoding RNAs associated with risk of cancers
Q64997211	LncRNA Profile Study Reveals a Three-LncRNA Signature Associated With the Pathological Complete Response Following Neoadjuvant Chemotherapy in Breast Cancer.
Q37361062	LncRNA mediated regulation of aging pathways in Drosophila melanogaster during dietary restriction
Q89518835	LncRNA-AC006129.1 reactivates a SOCS3-mediated anti-inflammatory response through DNA methylation-mediated CIC downregulation in schizophrenia
Q64249131	LncRNA-mRNA competing endogenous RNA network depicts transcriptional regulation in ischaemia reperfusion injury
Q92556229	LncRNAs related key pathways and genes in ischemic stroke by weighted gene co-expression network analysis (WGCNA)
Q37716567	LncSubpathway: a novel approach for identifying dysfunctional subpathways associated with risk lncRNAs by integrating lncRNA and mRNA expression profiles and pathway topologies
Q52724004	Long Non-Coding RNAs Associated with Metabolic Traits in Human White Adipose Tissue.
Q96953670	Long Non-coding RNA and mRNA Profile of Liver Tissue During Four Developmental Stages in the Chicken
Q61811637	Long Non-coding RNA as a Potential Biomarker Promotes the Proliferation and Metastasis of Gastric Cancer
Q91910144	Long Noncoding RNA Expression Profile in BV2 Microglial Cells Exposed to Lipopolysaccharide
Q35783785	Long Noncoding RNA Expression during Human B-Cell Development
Q89495349	Long Noncoding RNA RAET1K Enhances CCNE1 Expression and Cell Cycle Arrest of Lung Adenocarcinoma Cell by Sponging miRNA-135a-5p
Q64117506	Long Noncoding RNA SBF2-AS1 Is Critical for Tumorigenesis of Early-Stage Lung Adenocarcinoma
Q49213554	Long non-coding RNA GAS5 and ZFAS1 are prognostic markers involved in translation targeted by miR-940 in prostate cancer.
Q36299932	Long non-coding RNA profiling of human lymphoid progenitor cells reveals transcriptional divergence of B cell and T cell lineages
Q52656010	Long non-coding RNAs and mRNAs profiling during spleen development in pig.
Q92704553	Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development
Q92368930	Long non-coding RNAs in the spinal cord injury: Novel spotlight
Q55249401	Long non-coding RNAs involved in the regulatory network during porcine pre-implantation embryonic development and iPSC induction.
Q58713951	Long non-coding RNAs potentially function synergistically in the cellular reprogramming of SCNT embryos
Q48103298	Long non-coding and coding RNAs characterization in Peripheral Blood Mononuclear Cells and Spinal Cord from Amyotrophic Lateral Sclerosis patients
Q92260953	Long noncoding RNA CCDC144NL-AS1 knockdown induces naïve-like state conversion of human pluripotent stem cells
Q91705172	Long noncoding RNA NALT1-induced gastric cancer invasion and metastasis via NOTCH signaling pathway
Q50589433	Long noncoding RNAs and their proposed functions in fibre development of cotton (Gossypium spp.).
Q55251636	Long noncoding RNAs are associated with metabolic and cellular processes in the jejunum mucosa of pre-weaning calves in response to different diets.
Q37209773	Long noncoding RNAs in B-cell development and activation
Q64074955	Long noncoding RNAs of single hematopoietic stem and progenitor cells in healthy and dysplastic human bone marrow
Q64057335	Long-lived Temnothorax ant queens switch from investment in immunity to antioxidant production with age
Q30395296	Long-term neural and physiological phenotyping of a single human
Q52689591	Longitudinal Analyses of Blood Transcriptome During Conversion to Psychosis.
Q92925147	Longitudinal Epigenome-Wide Methylation Study of Cognitive Decline and Motor Progression in Parkinson's Disease
Q97517345	Longitudinal blood transcriptomic analysis to identify molecular regulatory patterns of bovine respiratory disease in beef cattle
Q92643114	Longitudinal comparative transcriptomics reveals unique mechanisms underlying extended healthspan in bats
Q64078047	Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons
Q37549786	Loss of O-GlcNAc glycosylation in forebrain excitatory neurons induces neurodegeneration
Q58778218	Loss of Trem2 in microglia leads to widespread disruption of cell coexpression networks in mouse brain
Q64248678	Low GAS5 Levels as a Predictor of Poor Survival in Patients with Lower-Grade Gliomas
Q58571239	Lung fibroblasts express a miR-19a-19b-20a sub-cluster to suppress TGF-β-associated fibroblast activation in murine pulmonary fibrosis
Q100958704	Lung gene expression signatures suggest pathogenic links and molecular markers for pulmonary tuberculosis, adenocarcinoma and sarcoidosis
Q104064517	Lung squamous cell carcinoma and lung adenocarcinoma differential gene expression regulation through pathways of Notch, Hedgehog, Wnt, and ErbB signalling
Q41627108	MCbiclust: a novel algorithm to discover large-scale functionally related gene sets from massive transcriptomics data collections
Q98771141	MMP25 Regulates Immune Infiltration Level and Survival Outcome in Head and Neck Cancer Patients
Q40124758	MPTP's pathway of toxicity indicates central role of transcription factor SP1.
Q64251772	Machine Learning and Integrative Analysis of Biomedical Big Data
Q91594507	Machine learning approaches to predict lupus disease activity from gene expression data
Q91198398	Macrophage-associated wound healing contributes to African green monkey SIV pathogenesis control
Q92860270	Mainland and island populations of Mussaenda kwangtungensis differ in their phyllosphere fungal community composition and network structure
Q53145718	Maize source leaf adaptation to nitrogen deficiency affects not only nitrogen and carbon metabolism but also control of phosphate homeostasis.
Q46744561	Mammalian γ2 AMPK regulates intrinsic heart rate
Q41572775	Mammary Tumor-Associated RNAs Impact Tumor Cell Proliferation, Invasion, and Migration
Q36094564	Mango: combining and analyzing heterogeneous biological networks.
Q92330174	ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks
Q47727614	Mapping gene regulatory networks from single-cell omics data.
Q58759810	Mapping molecular landmarks of human skeletal ontogeny and pluripotent stem cell-derived articular chondrocytes
Q34586391	Massive-scale gene co-expression network construction and robustness testing using random matrix theory
Q90350153	Mast cell-based molecular subtypes and signature associated with clinical outcome in early-stage lung adenocarcinoma
Q36433587	Maternal Early Pregnancy Serum Metabolites and Risk of Gestational Diabetes Mellitus
Q49980071	Maternal high-fat diet associated with altered gene expression, DNA methylation, and obesity risk in mouse offspring.
Q38404704	Maternal immune activation dysregulation of the fetal brain transcriptome and relevance to the pathophysiology of autism spectrum disorder
Q38023403	Mathematical and statistical modeling in cancer systems biology
Q37310875	Matrix factorization reveals aging-specific co-expression gene modules in the fat and muscle tissues in nonhuman primates
Q61448759	Maturing Human CD127+ CCR7+ PDL1+ Dendritic Cells Express AIRE in the Absence of Tissue Restricted Antigens
Q36676066	Maximal information component analysis: a novel non-linear network analysis method
Q89559160	MdMYB8 is associated with flavonol biosynthesis via the activation of the MdFLS promoter in the fruits of Malus crabapple
Q34480817	Mean Expression of the X-Chromosome is Associated with Neuronal Density
Q34509343	Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development
Q97418532	Mechanism of Astragalus membranaceus in the treatment of laryngeal cancer based on gene co-expression network and molecular docking
Q36904216	Mechanisms Underlying Adaptation to Life in Hydrogen Sulfide-Rich Environments
Q37105639	Mechanisms of severe acute respiratory syndrome coronavirus-induced acute lung injury
Q30575713	Medial prefrontal cortex: genes linked to bipolar disorder and schizophrenia have altered expression in the highly social maternal phenotype
Q50027416	Melonet-DB, a Grand RNA-Seq Gene Expression Atlas in Melon (Cucumis melo L.).
Q31128388	Mergeomics: a web server for identifying pathological pathways, networks, and key regulators via multidimensional data integration.
Q31140977	Mergeomics: multidimensional data integration to identify pathogenic perturbations to biological systems
Q90457835	Mesenchymal stromal cell exosomes prevent and revert experimental pulmonary fibrosis through modulation of monocyte phenotypes
Q47548438	Meta-Analysis of Aedes aegypti Expression Datasets: Comparing Virus Infection and Blood-Fed Transcriptomes to Identify Markers of Virus Presence
Q35921899	Meta-Analysis of Tumor Stem-Like Breast Cancer Cells Using Gene Set and Network Analysis
Q92538680	Meta-Analysis of in vitro-Differentiated Macrophages Identifies Transcriptomic Signatures That Classify Disease Macrophages in vivo
Q35803992	Meta-analysis derived atopic dermatitis (MADAD) transcriptome defines a robust AD signature highlighting the involvement of atherosclerosis and lipid metabolism pathways
Q36394312	Meta-analysis of cell- specific transcriptomic data using fuzzy c-means clustering discovers versatile viral responsive genes.
Q64066045	Meta-analysis of drought-tolerant genotypes in Oryza sativa: A network-based approach
Q33731336	Meta-analysis of host response networks identifies a common core in tuberculosis.
Q58569105	Meta-analysis of microarray datasets identify several chromosome segregation-related cancer/testis genes potentially contributing to anaplastic thyroid carcinoma
Q42708372	Meta-analysis of peripheral blood gene expression modules for COPD phenotypes
Q36240688	Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types
Q35927140	MetaMapR: pathway independent metabolomic network analysis incorporating unknowns
Q92761481	MetaOmGraph: a workbench for interactive exploratory data analysis of large expression datasets
Q57270698	MetaboDiff: an R package for differential metabolomic analysis
Q46026460	Metabolic Differences between Dogs of Different Body Sizes.
Q47661469	Metabolic alterations in multiple sclerosis and the impact of vitamin D supplementation
Q34995384	Metabolic and co-expression network-based analyses associated with nitrate response in rice
Q36601666	Metabolic effects of a 13-weeks lifestyle intervention in older adults: The Growing Old Together Study
Q64107278	Metabolic gene NR4A1 as a potential therapeutic target for non-smoking female non-small cell lung cancer patients
Q38877855	Metabolic network failures in Alzheimer's disease: A biochemical road map.
Q39061020	Metabolic systems biology: a brief primer.
Q64055983	Metabolite and transcript profiling of Guinea grass (Panicum maximum Jacq) response to elevated [CO] and temperature
Q64081510	Metabolome and Transcriptome Sequencing Analysis Reveals Anthocyanin Metabolism in Pink Flowers of Anthocyanin-Rich Tea ()
Q53595427	Metabolomic analysis of the salt-sensitive mutants reveals changes in amino acid and fatty acid composition important to long-term salt stress in Synechocystis sp. PCC 6803.
Q33682648	Metabolomic and Proteomic Analysis of Maize Embryonic Callus induced from immature embryo
Q34528227	Metabolomic basis of laboratory evolution of butanol tolerance in photosynthetic Synechocystis sp. PCC 6803.
Q92643763	Metabolomic networks and pathways associated with feed efficiency and related-traits in Duroc and Landrace pigs
Q92957091	Metabolomic, transcriptomic and genetic integrative analysis reveals important roles of adenosine diphosphate in haemostasis and platelet activation in non-small-cell lung cancer
Q95322476	Metabolomics and Multi-Omics Integration: A Survey of Computational Methods and Resources
Q28079376	Metabolomics in epidemiology: from metabolite concentrations to integrative reaction networks
Q60937679	Metabolomics of mammalian brain reveals regional differences
Q34476823	Metabonomic, transcriptomic, and genomic variation of a population cohort
Q31158395	Metabox: A Toolbox for Metabolomic Data Analysis, Interpretation and Integrative Exploration
Q39043211	Methylomic profiling of cortex samples from completed suicide cases implicates a role for PSORS1C3 in major depression and suicide
Q34676602	Methylomic profiling of human brain tissue supports a neurodevelopmental origin for schizophrenia
Q35157209	Methylomic trajectories across human fetal brain development
Q37346825	MiR-155-regulated molecular network orchestrates cell fate in the innate and adaptive immune response to Mycobacterium tuberculosis
Q92786376	MiR-190a potentially ameliorates postoperative cognitive dysfunction by regulating Tiam1
Q90456132	MicroRNA Ratios Distinguish Melanomas from Nevi
Q38725853	MicroRNA and gene co-expression networks characterize biological and clinical behavior of rhabdomyosarcomas.
Q52671205	MicroRNA duplication accelerates the recruitment of new targets during vertebrate evolution.
Q90316885	MicroRNA hsa-mir-3923 serves as a diagnostic and prognostic biomarker for gastric carcinoma
Q92241374	MicroRNA858-mediated regulation of anthocyanin biosynthesis in kiwifruit (Actinidia arguta) based on small RNA sequencing
Q38647608	MicroRNAs in the miR-17 and miR-15 families are downregulated in chronic kidney disease with hypertension
Q34672764	Microarray analyses of glucocorticoid and vitamin D3 target genes in differentiating cultured human podocytes
Q33910486	Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine (P. taeda L.).
Q35008782	Microarray enriched gene rank
Q33691125	Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis
Q38981232	Microbes Are Associated with Host Innate Immune Response in Idiopathic Pulmonary Fibrosis
Q55518516	Microbial Community Cohesion Mediates Community Turnover in Unperturbed Aquifers.
Q64107112	Microbial community structure and microbial networks correspond to nutrient gradients within coastal wetlands of the Laurentian Great Lakes
Q35567171	Microbial community transcriptional networks are conserved in three domains at ocean basin scales.
Q92000141	Microbial modulation of host body composition and plasma metabolic profile
Q47560330	Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner
Q92073367	Microenvironment of ruptured cerebral aneurysms discovered using data driven analysis of gene expression
Q36273576	Microgeographic Proteomic Networks of the Human Colonic Mucosa and Their Association With Inflammatory Bowel Disease
Q27011558	Microglia recapitulate a hematopoietic master regulator network in the aging human frontal cortex
Q42778397	Microglial-specific transcriptome changes following chronic alcohol consumption
Q91725883	Mimicking immune signatures of flavivirus infection with targeted adjuvants improves dengue subunit vaccine immunogenicity
Q55249178	Mining DNA methylation alterations towards a classification of placental pathologies.
Q37026969	Mining Functional Modules in Heterogeneous Biological Networks Using Multiplex PageRank Approach
Q92257326	Mining of Self-Organizing Map Gene-Expression Portraits Reveals Prognostic Stratification of HPV-Positive Head and Neck Squamous Cell Carcinoma
Q35093186	Mining the bladder cancer-associated genes by an integrated strategy for the construction and analysis of differential co-expression networks
Q35101607	Mining the tissue-tissue gene co-expression network for tumor microenvironment study and biomarker prediction
Q58769130	Minipuberty and Sexual Dimorphism in the Infant Human Thymus
Q38958932	Mislocalization-related disease gene discovery using gene expression based computational protein localization prediction
Q89804956	Misregulation of ELK1, AP1, and E12 Transcription Factor Networks Is Associated with Melanoma Progression
Q64051794	Mitochondria function associated genes contribute to Parkinson’s Disease risk and later age at onset
Q99555938	Mitochondrial Transfer by Human Mesenchymal Stromal Cells Ameliorates Hepatocyte Lipid Load in a Mouse Model of NASH
Q93059722	Mitochondrial genomic variation drives differential nuclear gene expression in discrete regions of Drosophila gene and protein interaction networks
Q90245532	Mitochondrial peptide BRAWNIN is essential for vertebrate respiratory complex III assembly
Q41212293	Modeling Rett Syndrome Using TALEN-Edited MECP2 Mutant Cynomolgus Monkeys
Q92922602	Modeling and analysis of RNA-seq data: a review from a statistical perspective
Q42287793	Modeling dynamic functional relationship networks and application to ex vivo human erythroid differentiation
Q27336134	Modeling host genetic regulation of influenza pathogenesis in the collaborative cross
Q92826319	Modelling pathogen load dynamics to elucidate mechanistic determinants of host-Plasmodium falciparum interactions
Q91993929	Modern human changes in regulatory regions implicated in cortical development
Q38733865	Modified mesenchymal stem cells using miRNA transduction alter lung injury in a bleomycin model
Q36025717	Modular Transcriptional Networks of the Host Pulmonary Response during Early and Late Pneumococcal Pneumonia
Q40253946	Modular expression analysis reveals functional conservation between human Langerhans cells and mouse cross-priming dendritic cells.
Q33360159	Modular organization of the white spruce (Picea glauca) transcriptome reveals functional organization and evolutionary signatures
Q47222854	Modularity Facilitates Flexible Tuning of Plastic and Evolutionary Gene Expression Responses During Early Divergence
Q41788266	Modularity: genes, development and evolution.
Q41758840	Modularized evolution in archaeal methanogens phylogenetic forest
Q57455273	Modulation of astrocyte reactivity improves functional deficits in mouse models of Alzheimer's disease
Q91928277	Modulation of neuroglial interactions using differential target multiplexed spinal cord stimulation in an animal model of neuropathic pain
Q91892876	Modulation of stress and immune response by Amblyomin-X results in tumor cell death in a horse melanoma model
Q30919427	Module-based association analysis for omics data with network structure
Q57807574	Module-detection approaches for the integration of multilevel omics data highlight the comprehensive response of Aspergillus fumigatus to caspofungin
Q36014791	Molecular Mechanisms of Same TCM Syndrome for Different Diseases and Different TCM Syndrome for Same Disease in Chronic Hepatitis B and Liver Cirrhosis
Q47558852	Molecular Network-Based Identification of Competing Endogenous RNAs in Thyroid Carcinoma.
Q92255554	Molecular Signature of Subtypes of Non-Small-Cell Lung Cancer by Large-Scale Transcriptional Profiling: Identification of Key Modules and Genes by Weighted Gene Co-Expression Network Analysis (WGCNA)
Q46159490	Molecular and cellular reorganization of neural circuits in the human lineage.
Q48460771	Molecular and functional definition of the developing human striatum.
Q92483967	Molecular architecture of lineage allocation and tissue organization in early mouse embryo
Q47231987	Molecular characterization of larval development from fertilization to metamorphosis in a reef-building coral
Q42363552	Molecular characterization of the transition from acute to chronic kidney injury following ischemia/reperfusion
Q37706877	Molecular differences between cerebral blood volume and vessel size in glioblastoma multiforme.
Q96952383	Molecular dissection of CRC primary tumors and their matched liver metastases reveals critical role of immune microenvironment, EMT and angiogenesis in cancer metastasis
Q34286409	Molecular ecological network analyses.
Q92861935	Molecular insight into cotton leaf curl geminivirus disease resistance in cultivated cotton (Gossypium hirsutum)
Q35891860	Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using associative transcriptomics
Q28732114	Molecular microcircuitry underlies functional specification in a basal ganglia circuit dedicated to vocal learning
Q38248400	Molecular networks and the evolution of human cognitive specializations
Q37724749	Molecular phenotyping of multiple mouse strains under metabolic challenge uncovers a role for Elovl2 in glucose-induced insulin secretion
Q36300257	Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
Q64097509	Molecular subtyping reveals immune alterations associated with progression of bronchial premalignant lesions
Q91386714	Monocytes affect bone mineral density in pre- and postmenopausal women through ribonucleoprotein complex biogenesis by integrative bioinformatics analysis
Q35047570	More than skin deep: functional genomic basis for resistance to amphibian chytridiomycosis
Q91703943	Morpho-physiological integrators, transcriptome and coexpression network analyses signify the novel molecular signatures associated with axillary bud in chrysanthemum
Q28386912	Mosaic epigenetic dysregulation of ectodermal cells in autism spectrum disorder
Q92659654	Mouse Ovarian Cancer Models Recapitulate the Human Tumor Microenvironment and Patient Response to Treatment
Q96647701	Mouse brain transcriptome responses to inhaled nanoparticulate matter differed by sex and APOE in Nrf2-Nfkb interactions
Q28593424	Mouse genome-wide association and systems genetics identify Asxl2 as a regulator of bone mineral density and osteoclastogenesis
Q90606927	Mouse transcriptome reveals potential signatures of protection and pathogenesis in human tuberculosis
Q64898545	Moving Just Enough Deep Sequencing Data to Get the Job Done.
Q64106105	Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability
Q89808364	MtSSPdb: the Medicago truncatula Small Secreted Peptide Database
Q47250000	Multi-Objective Optimization Algorithm to Discover Condition-Specific Modules in Multiple Networks.
Q92526826	Multi-Omic Analysis of the Microbiome and Metabolome in Healthy Subjects Reveals Microbiome-Dependent Relationships Between Diet and Metabolites
Q92134502	Multi-Omics Integration Reveals a Competitive Endogenous RNAs Network for the Identification of Progression Biomarkers and the Stratification of Patients Diagnosed With Nephroblastoma
Q38652357	Multi-Omics and Integrated Network Analyses Reveal New Insights into the Systems Relationships between Metabolites, Structural Genes, and Transcriptional Regulators in Developing Grape Berries (Vitis vinifera L.) Exposed to Water Deficit
Q102058995	Multi-level analysis of reproduction in an Antarctic midge identifies female and male accessory gland products that are altered by larval stress and impact progeny viability
Q91835188	Multi-level immune response network in mild-moderate Chronic Obstructive Pulmonary Disease (COPD)
Q26748831	Multi-omic data integration and analysis using systems genomics approaches: methods and applications in animal production, health and welfare
Q37440878	Multi-omic network signatures of disease.
Q35200829	Multi-omic signature of body weight change: results from a population-based cohort study
Q95319406	Multi-omic signatures identify pan-cancer classes of tumors beyond tissue of origin
Q49682532	Multi-omics integration reveals the landscape of pro-metastasis metabolism in hepatocellular carcinoma.
Q35082231	Multi-tissue analysis of co-expression networks by higher-order generalized singular value decomposition identifies functionally coherent transcriptional modules
Q90911117	Multi-tissue network analysis for drug prioritization in knee osteoarthritis
Q58604198	Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia
Q37667726	Multidimensional Integrative Genomics Approaches to Dissecting Cardiovascular Disease
Q48508433	Multifaceted remodeling by vitamin C boosts sensitivity of Mycobacterium tuberculosis subpopulations to combination treatment by anti-tubercular drugs.
Q38776110	Multiomic disease signatures converge to cytotoxic CD8 T cells in primary Sjögren's syndrome
Q64100328	Multiomics analysis profile acute liver injury module clusters to compare the therapeutic efficacy of bifendate and muaddil sapra
Q99711504	Multiple Processes May Involve in the IgG4-RD Pathogenesis: An Integrative Study via Proteomic and Transcriptomic Analysis
Q59791632	Multiple environmental stressors induce complex transcriptomic responses indicative of phenotypic outcomes in Western fence lizard
Q38754181	Multiplex matrix network analysis of protein complexes in the human TCR signalosome
Q41183987	Multitype Network-Guided Target Controllability in Phenotypically Characterized Osteosarcoma: Role of Tumor Microenvironment.
Q75720075	Musa balbisiana genome reveals subgenome evolution and functional divergence
Q36352707	Muscle Transcriptional Profile Based on Muscle Fiber, Mitochondrial Respiratory Activity, and Metabolic Enzymes
Q98735812	Muscle Transcriptome Analysis Reveals Potential Candidate Genes and Pathways Affecting Intramuscular Fat Content in Pigs
Q46275422	Mutational Analysis of Ionizing Radiation Induced Neoplasms.
Q83230246	Mutationally-activated PI3'-kinase-α promotes de-differentiation of lung tumors initiated by the BRAF oncoprotein kinase
Q26770773	Mutations and Modeling of the Chromatin Remodeler CHD8 Define an Emerging Autism Etiology
Q34478269	Mutations in SNX14 cause a distinctive autosomal-recessive cerebellar ataxia and intellectual disability syndrome
Q52722200	Mycobacterium tuberculosis Transfer RNA Induces IL-12p70 via Synergistic Activation of Pattern Recognition Receptors within a Cell Network.
Q37708277	Myeloid C/EBPβ deficiency reshapes microglial gene expression and is protective in experimental autoimmune encephalomyelitis
Q57182391	N-acetylcysteine targets 5 lipoxygenase-derived, toxic lipids and can synergize with PGE to inhibit ferroptosis and improve outcomes following hemorrhagic stroke in mice
Q92000742	NCAPG Is a Promising Therapeutic Target Across Different Tumor Types
Q92890127	NDRG1 suppresses vasculogenic mimicry and tumor aggressiveness in gastric carcinoma
Q39804773	NETWORK ASSISTED ANALYSIS TO REVEAL THE GENETIC BASIS OF AUTISM.
Q91290944	NF1 deficiency correlates with estrogen receptor signaling and diminished survival in breast cancer
Q28828493	NMR Characterization of Information Flow and Allosteric Communities in the MAP Kinase p38γ
Q37461397	NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors.
Q35910173	Navigating natural variation in herbivory-induced secondary metabolism in coyote tobacco populations using MS/MS structural analysis
Q64125076	Navigating the disease landscape: knowledge representations for contextualizing molecular signatures
Q33844280	Neofusicoccum parvum Colonization of the Grapevine Woody Stem Triggers Asynchronous Host Responses at the Site of Infection and in the Leaves
Q39095761	NetDiff - Bayesian model selection for differential gene regulatory network inference.
Q50099223	NetMiner-an ensemble pipeline for building genome-wide and high-quality gene co-expression network using massive-scale RNA-seq samples.
Q35919208	Netter: re-ranking gene network inference predictions using structural network properties
Q38460358	NetwoRx: connecting drugs to networks and phenotypes in Saccharomyces cerevisiae
Q37153681	Network Analysis Identifies Proinflammatory Plasma Cell Polarization for Secretion of ISG15 in Human Autoimmunity.
Q30276423	Network Analysis Implicates Alpha-Synuclein (Snca) in the Regulation of Ovariectomy-Induced Bone Loss
Q28596048	Network Analysis of Fine Particulate Matter (PM2.5) Emissions in China
Q92543792	Network Analysis of the Potential Role of DNA Methylation in the Relationship between Plasma Carotenoids and Lipid Profile
Q37486684	Network Analysis-Based Approach for Exploring the Potential Diagnostic Biomarkers of Acute Myocardial Infarction
Q64054720	Network Medicine in the Age of Biomedical Big Data
Q38921974	Network Reconstruction Reveals that Valproic Acid Activates Neurogenic Transcriptional Programs in Adult Brain Following Traumatic Injury
Q90454845	Network Rewiring in Cancer: Applications to Melanoma Cell Lines and the Cancer Genome Atlas Patients
Q41691676	Network analysis based on TCGA reveals hub genes in colon cancer
Q38075582	Network analysis for gene discovery in plant-specialized metabolism
Q34499444	Network analysis of a Pkd1-mouse model of autosomal dominant polycystic kidney disease identifies HNF4α as a disease modifier.
Q57074243	Network analysis of drug effect on triglyceride-associated DNA methylation
Q38990216	Network analysis of gene expression in mice provides new evidence of involvement of the mTOR pathway in antipsychotic-induced extrapyramidal symptoms.
Q92471662	Network analysis of human muscle adaptation to aging and contraction
Q58797942	Network analysis of inflammatory responses to sepsis by neutrophils and peripheral blood mononuclear cells
Q34243781	Network analysis of oyster transcriptome revealed a cascade of cellular responses during recovery after heat shock.
Q36177423	Network analysis of psoriasis reveals biological pathways and roles for coding and long non-coding RNAs.
Q57805290	Network analysis reveals a role for salicylic acid pathway components in shade avoidance
Q37110140	Network analysis reveals centrally connected genes and pathways involved in CD8+ T cell exhaustion versus memory.
Q31107788	Network and biosignature analysis for the integration of transcriptomic and metabolomic data to characterize leaf senescence process in sunflower
Q38692645	Network approaches to systems biology analysis of complex disease: integrative methods for multi-omics data.
Q99583087	Network based analysis of microarray gene expression profiles in response to electroacupuncture
Q36375590	Network based stratification of major cancers by integrating somatic mutation and gene expression data.
Q35097279	Network biology in medicine and beyond
Q92913701	Network construction of gastric microbiome and organization of microbial modules associated with gastric carcinogenesis
Q88586195	Network correlation analysis revealed potential new mechanisms for neural tube defects beyond folic acid
Q36161254	Network diffusion-based analysis of high-throughput data for the detection of differentially enriched modules
Q34539069	Network features suggest new hepatocellular carcinoma treatment strategies
Q38268011	Network for activation of human endothelial cells by oxidized phospholipids: a critical role of heme oxygenase 1.
Q34280844	Network methods for describing sample relationships in genomic datasets: application to Huntington's disease
Q91745589	Network modeling of single-cell omics data: challenges, opportunities, and progresses
Q33484446	Network module detection: Affinity search technique with the multi-node topological overlap measure
Q34287971	Network organization of the huntingtin proteomic interactome in mammalian brain
Q28652238	Network signatures link hepatic effects of anti-diabetic interventions with systemic disease parameters
Q41867119	Network statistics of genetically-driven gene co-expression modules in mouse crosses
Q97067564	Network-Based Analysis of OMICs Data to Understand the HIV-Host Interaction
Q58779278	Network-Based Approaches to Explore Complex Biological Systems towards Network Medicine
Q38632088	Network-Based Genomic Analysis of Human Oligodendrocyte Progenitor Differentiation
Q55209361	Network-Based Predictors of Progression in Head and Neck Squamous Cell Carcinoma.
Q38991241	Network-Guided Key Gene Discovery for a Given Cellular Process
Q47682129	Network-Wide Screen Identifies Variation of Novel Precise On-Module Targets Using Conformational Modudaoism
Q38377587	Network-based analysis reveals novel gene signatures in peripheral blood of patients with chronic obstructive pulmonary disease.
Q90171411	Network-based approach to identify biomarkers predicting response and prognosis for HER2-negative breast cancer treatment with taxane-anthracycline neoadjuvant chemotherapy
Q35068236	Network-based differential gene expression analysis suggests cell cycle related genes regulated by E2F1 underlie the molecular difference between smoker and non-smoker lung adenocarcinoma
Q53763092	Network-based expression analysis reveals key genes related to glucocorticoid resistance in infant acute lymphoblastic leukemia.
Q92653321	Network-based feature selection reveals substructures of gene modules responding to salt stress in rice
Q90448664	Network-based identification of signature genes KLF6 and SPOCK1 associated with oral submucous fibrosis
Q91583834	Network-based metabolic characterization of renal cell carcinoma
Q35461696	Network-based modular latent structure analysis
Q40468875	Network-based proteomic analysis for postmenopausal osteoporosis in Caucasian females.
Q111148886	Networks and Graphs Discovery in Metabolomics Data Analysis and Interpretation
Q34192901	Networks of neuronal genes affected by common and rare variants in autism spectrum disorders
Q36802404	Neural basis of reward anticipation and its genetic determinants
Q92095598	Neurobehavioural characterisation and stratification of reinforcement-related behaviour
Q28537595	Neurobiological signatures of alcohol dependence revealed by protein profiling
Q46271611	Neurogenomic Signatures of Successes and Failures in Life-History Transitions in a Key Insect Pollinator.
Q29396093	Neuroinformatic analyses of common and distinct genetic components associated with major neuropsychiatric disorders
Q61454888	Neuronal Signal Transduction-Involved Genes in Pig Hypothalamus Affect Feed Efficiency as Revealed by Transcriptome Analysis
Q43656306	Neuropathological and transcriptomic characteristics of the aged brain.
Q92002426	Neuroprotectants attenuate hypobaric hypoxia-induced brain injuries in cynomolgus monkeys
Q92321952	Neutrophils-related host factors associated with severe disease and fatality in patients with influenza infection
Q64071548	New Insights of Salicylic Acid Into Stamen Abortion of Female Flowers in Tung Tree ()
Q89766965	New Pathogenesis Mechanisms and Translational Leads Identified by Multidimensional Analysis of Necrotizing Myositis in Primates
Q89948200	New insight into the molecular mechanism of colour differentiation among floral segments in orchids
Q60907927	New insights in the control of antioxidants accumulation in tomato by transcriptomic analyses of genotypes exhibiting contrasting levels of fruit metabolites
Q26746206	Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research
Q38514940	Next generation transcriptomics and genomics elucidate biological complexity of microglia in health and disease.
Q39024617	Next-generation sequencing based genotyping, cytometry and phenotyping for understanding diversity and evolution of Guinea yams
Q90315710	Nitrate 2020: Thirty years from transport to signaling networks
Q54517758	No reliable gene expression biomarkers of current or impending neurocognitive impairment in peripheral blood monocytes of persons living with HIV.
Q46251287	Non-Additive Transcriptomic Responses to Inoculation with Rhizobia in a Young Allopolyploid Compared with Its Diploid Progenitors
Q36191826	Noncoding RNA in the transcriptional landscape of human neural progenitor cell differentiation
Q31112591	Nonlinear Network Reconstruction from Gene Expression Data Using Marginal Dependencies Measured by DCOL.
Q33893433	Nonlinear gene cluster analysis with labeling for microarray gene expression data in organ development
Q39530385	Normalized lmQCM: An Algorithm for Detecting Weak Quasi-Cliques in Weighted Graph with Applications in Gene Co-Expression Module Discovery in Cancers
Q92725736	Novel Alzheimer risk genes determine the microglia response to amyloid-β but not to TAU pathology
Q89976628	Novel Aspects on The Interaction Between Grapevine and Plasmopara viticola: Dual-RNA-Seq Analysis Highlights Gene Expression Dynamics in The Pathogen and The Plant During The Battle For Infection
Q89966150	Novel Combined Tissue Transcriptome Analysis After Lentogenic Newcastle Disease Virus Challenge in Inbred Chicken Lines of Differential Resistance
Q93008966	Novel Findings From a Metabolomics Study of Left Ventricular Diastolic Function: The Bogalusa Heart Study
Q38727049	Novel Hybrid Phenotype Revealed in Small Cell Lung Cancer by a Transcription Factor Network Model That Can Explain Tumor Heterogeneity.
Q90580543	Novel Lipid Long Intervening Noncoding RNA, Oligodendrocyte Maturation-Associated Long Intergenic Noncoding RNA, Regulates the Liver Steatosis Gene Stearoyl-Coenzyme A Desaturase As an Enhancer RNA
Q92887135	Novel Metabolites Are Associated With Augmentation Index and Pulse Wave Velocity: Findings From the Bogalusa Heart Study
Q97645840	Novel Potential Biomarkers Associated With Epithelial to Mesenchymal Transition and Bladder Cancer Prognosis Identified by Integrated Bioinformatic Analysis
Q47195282	Novel Transcriptional Activity and Extensive Allelic Imbalance in the Human MHC Region
Q90941038	Novel eosinophilic gene expression networks associated with IgE in two distinct asthma populations
Q92619746	Novel eye genes systematically discovered through an integrated analysis of mouse transcriptomes and phenome
Q40253467	Novel insights into systemic autoimmune rheumatic diseases using shared molecular signatures and an integrative analysis
Q35193842	Novel insights into the regulatory architecture of CD4+ T cells in rheumatoid arthritis
Q38292149	Novel metabotropic glutamate receptor 4 and glutamate receptor 8 therapeutics for the treatment of anxiety
Q92057319	Novel serum metabolites associate with cognition phenotypes among Bogalusa Heart Study participants
Q59050802	Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis
Q93270690	Novel specialized cell state and spatial compartments within the germinal center
Q47340286	Novel transcriptional networks regulated by CLOCK in human neurons
Q95328301	Nutrition-responsive gene expression and the developmental evolution of insect polyphenism
Q97886032	OASL as a Diagnostic Marker for Influenza Infection Revealed by Integrative Bioinformatics Analysis With XGBoost
Q28708662	OPTIMAS-DW: a comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize
Q28595432	OSG-GEM: Gene Expression Matrix Construction Using the Open Science Grid
Q50209842	OTUD7A Regulates Neurodevelopmental Phenotypes in the 15q13.3 Microdeletion Syndrome.
Q89868102	Ocean acidification promotes broad transcriptomic responses in marine metazoans: a literature survey
Q64083385	Omics-based analyses revealed metabolic responses of to lignocellulose-derived inhibitors furfural, formic acid and phenol stress for butanol fermentation
Q35102169	On control of singleton attractors in multiple Boolean networks: integer programming-based method
Q42513050	Oncosis and apoptosis induction by activation of an overexpressed ion channel in breast cancer cells
Q55306139	Optimizing miRNA-module diagnostic biomarkers of gastric carcinoma via integrated network analysis.
Q33685371	Organ-specific transcriptome profiling of metabolic and pigment biosynthesis pathways in the floral ornamental progenitor species Anthurium amnicola Dressler.
Q91693001	Organophosphate pesticide exposure and differential genome-wide DNA methylation
Q47131461	Organotypic three-dimensional cancer cell cultures mirror drug responses in vivo: lessons learned from the inhibition of EGFR signaling.
Q36904945	Origin and evolution of developmental enhancers in the mammalian neocortex
Q30854754	OrthoClust: an orthology-based network framework for clustering data across multiple species
Q88803596	Osmotic stress-responsive promoter upstream transcripts (PROMPTs) act as carriers of MYB transcription factors to induce the expression of target genes in Populus simonii
Q33792437	Overexpressing the Sedum alfredii Cu/Zn Superoxide Dismutase Increased Resistance to Oxidative Stress in Transgenic Arabidopsis
Q64093755	Overexpression of ASPM, CDC20, and TTK Confer a Poorer Prognosis in Breast Cancer Identified by Gene Co-expression Network Analysis
Q42378448	Overexpression of COL3A1 confers a poor prognosis in human bladder cancer identified by co-expression analysis
Q47817595	Overexpression of Hsa-miR-320 Is Associated With Invasion and Metastasis of Ovarian Cancer.
Q56985570	Overexpression of the Sorghum bicolor SbCCoAOMT alters cell wall associated hydroxycinnamoyl groups
Q36512144	Overlapping signatures of chronic pain in the DNA methylation landscape of prefrontal cortex and peripheral T cells
Q61797508	Oxytocin pathway gene networks in the human brain
Q92675293	PDXK mutations cause polyneuropathy responsive to pyridoxal 5'-phosphate supplementation
Q36434688	PGSB PlantsDB: updates to the database framework for comparative plant genome research
Q37686796	PIM1 kinase inhibition as a targeted therapy against triple-negative breast tumors with elevated MYC expression
Q41900367	PLAU inferred from a correlation network is critical for suppressor function of regulatory T cells
Q90706178	POPDC3 is a potential biomarker for prognosis and radioresistance in patients with head and neck squamous cell carcinoma
Q92738146	PPWD1 is associated with the occurrence of postmenopausal osteoporosis as determined by weighted gene co‑expression network analysis
Q97692511	PRMT5 promotes cancer cell migration and invasion through the E2F pathway
Q42691514	PTSD Blood Transcriptome Mega-Analysis: Shared Inflammatory Pathways Across Biological Sex and Modes of Trauma.
Q38137634	PainNetworks: a web-based resource for the visualisation of pain-related genes in the context of their network associations
Q37508331	Pan- and core- network analysis of co-expression genes in a model plant.
Q92405554	Pan-Cancer and Single-Cell Modeling of Genomic Alterations Through Gene Expression
Q64945759	Pan-cancer analysis identifies telomerase-associated signatures and cancer subtypes.
Q52718930	Pan-cancer analysis of somatic mutations and transcriptomes reveals common functional gene clusters shared by multiple cancer types.
Q99240720	Pan-cancer analysis reveals that ACE2 is positively associated with immunotherapy response and is a potential protective factor for cancer progression
Q37701684	Pan-organ transcriptome variation across 21 cancer types
Q47098449	Panax ginseng genome examination for ginsenoside biosynthesis
Q63664483	PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data
Q91642880	Parallel Bud Mutation Sequencing Reveals that Fruit Sugar and Acid Metabolism Potentially Influence Stress in Malus
Q90171616	Parallel selection on thermal physiology facilitates repeated adaptation of city lizards to urban heat islands
Q92015918	Parallelism in eco-morphology and gene expression despite variable evolutionary and genomic backgrounds in a Holarctic fish
Q38603331	Parkinson's disease is associated with DNA methylation levels in human blood and saliva
Q64056472	Parsimonious Gene Correlation Network Analysis (PGCNA): a tool to define modular gene co-expression for refined molecular stratification in cancer
Q41031697	Partial exhaustion of CD8 T cells and clinical response to teplizumab in new-onset type 1 diabetes
Q35039022	Pathogen associated molecular pattern (PAMP)-triggered immunity is compromised under C-limited growth
Q64971365	Pathologic gene network rewiring implicates PPP1R3A as a central regulator in pressure overload heart failure.
Q90929165	Pathological priming causes developmental gene network heterochronicity in autistic subject-derived neurons
Q38473920	Pathway deregulation and expression QTLs in response to Actinobacillus pleuropneumoniae infection in swine
Q26995884	Pathway mapping and development of disease-specific biomarkers: protein-based network biomarkers
Q30836899	Pathway network inference from gene expression data
Q35920907	Pathway-based analyses
Q30896775	Pattern recognition methods to relate time profiles of gene expression with phenotypic data: a comparative study
Q52575675	Patterns of differential gene expression in a cellular model of human islet development, and relationship to type 2 diabetes predisposition.
Q35736903	Patterns of differential gene expression in adult rotation-resistant and wild-type western corn rootworm digestive tracts
Q36017799	Patterns of gene expression in the sheep heart during the perinatal period revealed by transcriptomic modeling
Q58774024	PdumBase: a transcriptome database and research tool for Platynereis dumerilii and early development of other metazoans
Q36939982	Peeling back the evolutionary layers of molecular mechanisms responsive to exercise-stress in the skeletal muscle of the racing horse.
Q38714487	Perfusion of isolated rat kidney with Mesenchymal Stromal Cells/Extracellular Vesicles prevents ischaemic injury.
Q57086655	Periodic and coordinated gene expression between a diazotroph and its diatom host
Q89619312	Peripheral Blood Leukocyte RNA-Seq Identifies a Set of Genes Related to Abnormal Psychomotor Behavior Characteristics in Patients with Schizophrenia
Q89638005	Peripheral CD8+ T cell characteristics associated with durable responses to immune checkpoint blockade in patients with metastatic melanoma
Q60040906	Peripheral DNA methylation, cognitive decline and brain aging: pilot findings from the Whitehall II imaging study
Q39105633	Peripheral blood gene expression profiles linked to monoamine metabolite levels in cerebrospinal fluid.
Q91619640	Peripheral blood mononuclear cell transcriptomes reveal an over-representation of down-regulated genes associated with immunity in HIV-exposed uninfected infants
Q55260254	Peripheral tissues reprogram CD8+ T cells for pathogenicity during graft-versus-host disease.
Q91672977	Peritoneal macrophages have an impaired immune response in obesity which can be reversed by subsequent weight loss
Q33662822	Personalized Immunomonitoring Uncovers Molecular Networks that Stratify Lupus Patients
Q60957022	Personalized Medicine and Molecular Interaction Networks in Amyotrophic Lateral Sclerosis (ALS): Current Knowledge
Q38604531	Personalized analysis of pathway aberrance induced by sevoflurane and propofol
Q43735614	Pervasive Effects of Aging on Gene Expression in Wild Wolves
Q97418172	Pervasive duplication, biased molecular evolution and comprehensive functional analysis of the PP2C family in Glycine max
Q64067598	Pharmacological systems analysis defines EIF4A3 functions in cell-cycle and RNA stress granule formation
Q92115528	Phased genome sequence of an interspecific hybrid flowering cherry, 'Somei-Yoshino' (Cerasus × yedoensis)
Q35898127	PhenoMeter: A Metabolome Database Search Tool Using Statistical Similarity Matching of Metabolic Phenotypes for High-Confidence Detection of Functional Links
Q89128831	Phenotypic Convergence: Distinct Transcription Factors Regulate Common Terminal Features
Q40500056	Phenotypic and Comparative Transcriptome Analysis of Different Ploidy Plants in Dendrocalamus latiflorus Munro
Q47176016	Phenotypic and Transcriptional Analysis of Divergently Selected Maize Populations Reveals the Role of Developmental Timing in Seed Size Determination
Q98282968	Phenotypic and gene expression features associated with variation in chronic ethanol consumption in heterogeneous stock collaborative cross mice
Q64969922	Phospho-RNA-seq: a modified small RNA-seq method that reveals circulating mRNA and lncRNA fragments as potential biomarkers in human plasma.
Q55518732	PhytoNet: comparative co-expression network analyses across phytoplankton and land plants.
Q64095120	Phytochrome A Regulates Carbon Flux in Dark Grown Tomato Seedlings
Q92078523	Phytoplankton transcriptomic and physiological responses to fixed nitrogen in the California current system
Q34646875	Pig immune response to general stimulus and to porcine reproductive and respiratory syndrome virus infection: a meta-analysis approach
Q90399488	Pilot Study of Metabolomic Clusters as State Markers of Major Depression and Outcomes to CBT Treatment
Q91856140	PlaD: A Transcriptomics Database for Plant Defense Responses to Pathogens, Providing New Insights into Plant Immune System
Q92812919	Placenta-Specific Genes, Their Regulation During Villous Trophoblast Differentiation and Dysregulation in Preterm Preeclampsia
Q92999476	Placental epigenetic clocks: estimating gestational age using placental DNA methylation levels
Q36238773	Placental transcriptome co-expression analysis reveals conserved regulatory programs across gestation
Q28603507	Plankton networks driving carbon export in the oligotrophic ocean
Q64958654	Plant-necrotroph co-transcriptome networks illuminate a metabolic battlefield.
Q90265974	Plasmacytoid DCs From Patients With Sjögren's Syndrome Are Transcriptionally Primed for Enhanced Pro-inflammatory Cytokine Production
Q35822120	Plasmodium berghei ANKA causes intestinal malaria associated with dysbiosis
Q90634750	Pleiotropy facilitates local adaptation to distant optima in common ragweed (Ambrosia artemisiifolia)
Q89243459	Poly(GR) impairs protein translation and stress granule dynamics in C9orf72-associated frontotemporal dementia and amyotrophic lateral sclerosis
Q60920471	Polybenzyl Glutamate Biocompatible Scaffold Promotes the Efficiency of Retinal Differentiation toward Retinal Ganglion Cell Lineage from Human-Induced Pluripotent Stem Cells
Q90050769	Polycystic Ovary Syndrome: Novel and Hub lncRNAs in the Insulin Resistance-Associated lncRNA-mRNA Network
Q99546720	Polyphenism of a novel trait integrated rapidly evolving genes into ancestrally plastic networks
Q91742648	Polysome Profiling of a Human Glioblastoma Reveals Intratumoral Heterogeneity
Q35610324	Poplar trees reconfigure the transcriptome and metabolome in response to drought in a genotype- and time-of-day-dependent manner
Q39036657	Population-level expression variability of mitochondrial DNA-encoded genes in humans.
Q35902047	Post-weaning blood transcriptomic differences between Yorkshire pigs divergently selected for residual feed intake
Q35661586	Potent Cell-Intrinsic Immune Responses in Dendritic Cells Facilitate HIV-1-Specific T Cell Immunity in HIV-1 Elite Controllers
Q90480290	Potential Biomarkers for Feed Efficiency-Related Traits in Nelore Cattle Identified by Co-expression Network and Integrative Genomics Analyses
Q31021225	Potential Role of lncRNAs in Contributing to Pathogenesis of Intervertebral Disc Degeneration Based on Microarray Data.
Q93357094	Potential four‑miRNA signature associated with T stage and prognosis of patients with pancreatic ductal adenocarcinoma identified by co‑expression analysis
Q99404314	Potential mechanism of RRM2 for promoting Cervical Cancer based on weighted gene co-expression network analysis
Q31143693	Practical aspects of gene regulatory inference via conditional inference forests from expression data.
Q89687515	Pre-treatment neutrophils count as a prognostic marker to predict chemotherapeutic response and survival outcomes in glioma: a single-center analysis of 288 cases
Q41575762	PrePhyloPro: phylogenetic profile-based prediction of whole proteome linkages
Q47559183	Precision Medicine for Acute Kidney Injury (AKI): Redefining AKI by Agnostic Kidney Tissue Interrogation and Genetics
Q104070079	Precision medicine for heart failure based on molecular mechanisms The Research Achievement Award Lecture
Q37680367	Predicting DNA methylation level across human tissues
Q34247758	Predicting glioblastoma prognosis networks using weighted gene co-expression network analysis on TCGA data
Q90711426	Predicting growth rate from gene expression
Q64989197	Prediction of VEGF-C as a Key Target of Pure Total Flavonoids From Citrus Against NAFLD in Mice via Network Pharmacology.
Q92524547	Prediction of competing endogenous RNA coexpression network as prognostic markers in AML
Q34045195	Prediction of miRNA-mRNA associations in Alzheimer's disease mice using network topology
Q92085561	Prediction of regulatory long intergenic non-coding RNAs acting in trans through base-pairing interactions
Q88136013	Predictive test for chemotherapy response in resectable gastric cancer: a multi-cohort, retrospective analysis
Q36282483	Preferential expression of scores of functionally and evolutionarily diverse DNA and RNA-binding proteins during Oxytricha trifallax macronuclear development.
Q30276067	Preservation Analysis of Macrophage Gene Coexpression Between Human and Mouse Identifies PARK2 as a Genetically Controlled Master Regulator of Oxidative Phosphorylation in Humans
Q92365687	Prevention of tuberculosis in macaques after intravenous BCG immunization
Q38206642	Principles and methods of integrative genomic analyses in cancer
Q59137666	Prior Knowledge Driven Joint NMF Algorithm for ceRNA Co-Module Identification
Q36222653	Prior knowledge guided eQTL mapping for identifying candidate genes
Q57073696	Prioritized High-Confidence Risk Genes for Intellectual Disability Reveal Molecular Convergence During Brain Development
Q64945658	Prioritizing Crohn's disease genes by integrating association signals with gene expression implicates monocyte subsets.
Q42853637	Proceedings of the Thirteenth Annual UT- KBRIN Bioinformatics Summit 2014
Q91260394	Products of Chemoenzymatic Synthesis Representing MUC1 Tandem Repeat Unit with T-, ST- or STn-antigen Revealed Distinct Specificities of Anti-MUC1 Antibodies
Q91962578	Profiles of Long Non-Coding RNAs and mRNA Expression in Human Macrophages Regulated by Interleukin-27
Q58714868	Profiles of alternative splicing in colorectal cancer and their clinical significance: A study based on large-scale sequencing data
Q55437894	Profiling of Long Non-coding RNAs and mRNAs by RNA-Sequencing in the Hippocampi of Adult Mice Following Propofol Sedation.
Q31120308	Profiling of childhood adversity-associated DNA methylation changes in alcoholic patients and healthy controls
Q90734697	Profiling of tRNA Halves and YRNA Fragments in Serum and Tissue From Oral Squamous Cell Carcinoma Patients Identify Key Role of 5' tRNA-Val-CAC-2-1 Half
Q90704195	Profiling the mouse brain endothelial transcriptome in health and disease models reveals a core blood-brain barrier dysfunction module
Q33889197	Prognosis of stage III colorectal carcinomas with FOLFOX adjuvant chemotherapy can be predicted by molecular subtype
Q58750368	Prognostic Genes of Breast Cancer Identified by Gene Co-expression Network Analysis
Q89497246	Prognostic Heterogeneity of MRE11 Based on the Location of Primary Colorectal Cancer Is Caused by Activation of Different Immune Signals
Q47095948	Prognostic genes of breast cancer revealed by gene co-expression network analysis
Q92382490	Prognostic genes of triple-negative breast cancer identified by weighted gene co-expression network analysis
Q59334867	Prognostic value of sorting nexin 10 weak expression in stomach adenocarcinoma revealed by weighted gene co-expression network analysis
Q30754508	Progranulin Deficiency Promotes Circuit-Specific Synaptic Pruning by Microglia via Complement Activation
Q56794295	Progressive Recruitment of Mesenchymal Progenitors Reveals a Time-Dependent Process of Cell Fate Acquisition in Mouse and Human Nephrogenesis
Q99405810	Promising targets and drugs in rheumatoid arthritis: a module-based and cumulatively scoring approach
Q97521204	ProtExA: A tool for post-processing proteomics data providing differential expression metrics, co-expression networks and functional analytics
Q40498590	Protection against maternal infection-associated fetal growth restriction: proof-of-concept with a microbial-derived immunomodulator
Q34400233	Protection genes in nucleus accumbens shell affect vulnerability to nicotine self-administration across isogenic strains of adolescent rat
Q36115923	Protein Co-Expression Analysis as a Strategy to Complement a Standard Quantitative Proteomics Approach: Case of a Glioblastoma Multiforme Study.
Q28652799	Protein Network Signatures Associated with Exogenous Biofuels Treatments in Cyanobacterium Synechocystis sp. PCC 6803
Q36964507	Protein co-expression network analysis (ProCoNA).
Q33926111	Protein expression based multimarker analysis of breast cancer samples
Q33913554	Protein homeostasis of a metastable subproteome associated with Alzheimer's disease
Q38708267	Protein network construction using reverse phase protein array data
Q37736390	Proteogenomic integration reveals therapeutic targets in breast cancer xenografts
Q36361390	Proteome Analysis of Renoprotection Mediated by a Novel Cyclic Helix B Peptide in Acute Kidney Injury
Q97595565	Proteome activity landscapes of tumor cell lines determine drug responses
Q36406271	Proteome profiling in IL-1β and VEGF-activated human umbilical vein endothelial cells delineates the interlink between inflammation and angiogenesis
Q90281621	Proteomic Analysis of Urinary Microvesicles and Exosomes in Medullary Sponge Kidney Disease and Autosomal Dominant Polycystic Kidney Disease
Q91235709	Proteomic analysis of eleven tissues in the Chinese giant salamander (Andrias davidianus)
Q27023085	Proteomic approaches and identification of novel therapeutic targets for alcoholism
Q37686305	Proteomic profiling of NCI-60 extracellular vesicles uncovers common protein cargo and cancer type-specific biomarkers
Q46283339	Protocol for Coexpression Network Construction and Stress-Responsive Expression Analysis in Brachypodium
Q47263918	Psychiatric polygenic risk associates with cortical morphology and functional organization in aging
Q90406514	Putative contributions of the sex chromosome proteins SOX3 and SRY to neurodevelopmental disorders
Q64232878	PyMINEr Finds Gene and Autocrine-Paracrine Networks from Human Islet scRNA-Seq
Q38656303	Quantifying Gene Regulatory Relationships with Association Measures: A Comparative Study
Q37367051	Quantitative Identification of Compound-Dependent On-Modules and Differential Allosteric Modules From Homologous Ischemic Networks
Q40504844	Quantitative Resistance to Verticillium Wilt in Medicago truncatula Involves Eradication of the Fungus from Roots and Is Associated with Transcriptional Responses Related to Innate Immunity
Q36168344	Quantitative assessment of gene expression network module-validation methods
Q102220365	Quantitative comparison of the biomass-degrading enzyme repertoires of five filamentous fungi
Q35498406	Quantitative phosphoproteomics of Alzheimer's disease reveals cross-talk between kinases and small heat shock proteins.
Q37046560	Quantitative proteomics reveals the novel co-expression signatures in early brain development for prognosis of glioblastoma multiforme
Q35024644	Quantitative trait loci-dependent analysis of a gene co-expression network associated with Fusarium head blight resistance in bread wheat (Triticum aestivum L.).
Q96950776	Quiescent stem cell marker genes in glioma gene networks are sufficient to distinguish between normal and glioblastoma (GBM) samples
Q47844716	RGBM: regularized gradient boosting machines for identification of the transcriptional regulators of discrete glioma subtypes.
Q33728908	RIPK1 mediates axonal degeneration by promoting inflammation and necroptosis in ALS.
Q37368517	RMaNI: Regulatory Module Network Inference framework
Q37349640	RNA Sequencing-Based Genome Reannotation of the Dermatophyte Arthroderma benhamiae and Characterization of Its Secretome and Whole Gene Expression Profile during Infection.
Q47262108	RNA sequencing identifies gene regulatory networks controlling extracellular matrix synthesis in intervertebral disk tissues.
Q38694565	RNA sequencing in post-mortem human brains of neuropsychiatric disorders.
Q35579955	RNA sequencing of laser-capture microdissected compartments of the maize kernel identifies regulatory modules associated with endosperm cell differentiation
Q38765467	RNA sequencing of pancreatic adenocarcinoma tumors yields novel expression patterns associated with long-term survival and reveals a role for ANGPTL4
Q92461206	RNA-Seq Analysis Identified XLOC_009190 as Potential Therapeutic Target for Lung Adenocarcinoma
Q89850947	RNA-Seq Analysis of Genetic and Transcriptome Network Effects of Dual-Trait Selection for Ethanol Preference and Withdrawal Using SOT and NOT Genetic Models
Q61799219	RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types
Q36127162	RNA-Seq analysis of seasonal and individual variation in blood transcriptomes of healthy managed bottlenose dolphins
Q61806619	RNA-Seq transcriptome analysis shows anti-tumor actions of melatonin in a breast cancer xenograft model
Q58091890	RNA-Seq transcriptomic profiling of primary murine microglia treated with LPS or LPS + IFNγ
Q88867119	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease
Q38429862	RNA-seq analysis of amygdala tissue reveals characteristic expression profiles in schizophrenia
Q64925719	RNA-seq and flow-cytometry of conventional, scalp, and palmoplantar psoriasis reveal shared and distinct molecular pathways.
Q38432436	RNA-seq implicates deregulation of the immune system in the pathogenesis of diverticulitis
Q34579107	RNA-sequencing reveals early, dynamic transcriptome changes in the corollas of pollinated petunias
Q47141292	RNA-sequencing reveals genome-wide long non-coding RNAs profiling associated with early development of diabetic nephropathy
Q92504571	RNAi based transcriptome suggests genes potentially regulated by HSF1 in the Pacific oyster Crassostrea gigas under thermal stress
Q36093828	RNAseq Analyses Identify Tumor Necrosis Factor-Mediated Inflammation as a Major Abnormality in ALS Spinal Cord
Q28397762	Random generalized linear model: a highly accurate and interpretable ensemble predictor
Q90227563	Rapid niche expansion by selection on functional genomic variation after ecosystem recovery
Q24312938	Rare coding variants in the phospholipase D3 gene confer risk for Alzheimer's disease
Q33707696	Rare damaging variants in DNA repair and cell cycle pathways are associated with hippocampal and cognitive dysfunction: a combined genetic imaging study in first-episode treatment-naive patients with schizophrenia
Q89981210	Recent advances in functional research in Giardia intestinalis
Q64232306	Recent advances in gene function prediction using context-specific coexpression networks in plants
Q96034435	Recommendations for the analysis of gene expression data to identify intrinsic differences between similar tissues
Q36377263	Reconstructing context-specific gene regulatory network and identifying modules and network rewiring through data integration
Q64888879	Reconstruction and inference of the Lactococcus lactis MG1363 gene co-expression network.
Q47110624	Recurrent patterns of microdiversity in a temperate coastal marine environment.
Q37651849	Recurrently deregulated lncRNAs in hepatocellular carcinoma
Q64062687	Recursive Motif Analyses Identify Brain Epigenetic Transcription Regulatory Modules
Q54110032	Reduction of protein kinase A-mediated phosphorylation of ATXN1-S776 in Purkinje cells delays onset of Ataxia in a SCA1 mouse model.
Q64945872	Refining the Pneumococcal Competence Regulon by RNA Sequencing.
Q58698447	Regional Differences and Similarities in the Brain Transcriptome for Mice Selected for Ethanol Preference From HS-CC Founders
Q104491983	Regionally diverse astrocyte subtypes and their heterogeneous response to EAE
Q88492339	Regularized Multi-View Subspace Clustering for Common Modules Across Cancer Stages
Q41614319	Regulation of Noncoding Transcriptome in Developing Photoreceptors by Rod Differentiation Factor NRL.
Q60909123	Regulation of RNA editing by RNA-binding proteins in human cells
Q93223327	Regulation of cell-type-specific transcriptomes by microRNA networks during human brain development
Q90013024	Regulation of glucose uptake and inflammation markers by FOXO1 and FOXO3 in skeletal muscle
Q92827451	Regulation of rumen development in neonatal ruminants through microbial metagenomes and host transcriptomes
Q34479474	Regulation of the ESC transcriptome by nuclear long noncoding RNAs
Q53232268	Regulatory RNA at the root of animals: dynamic expression of developmental lincRNAs in the calcisponge Sycon ciliatum.
Q46885986	Regulatory motifs identified from a maize developmental coexpression network
Q89882201	Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information
Q51453047	Relation of Transcriptional Factors to the Expression and Activity of Cytochrome P450 and UDP-Glucuronosyltransferases 1A in Human Liver: Co-Expression Network Analysis.
Q38660024	Relationships between drought, heat and air humidity responses revealed by transcriptome-metabolome co-analysis
Q33560362	Relationships between gut microbiota, plasma metabolites, and metabolic syndrome traits in the METSIM cohort
Q90450687	Repair mechanism of astrocytes and non-astrocytes in spinal cord injury
Q28384518	Repeated gestational exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1) modulated effects in maternal and fetal tissues
Q38688414	Replicable and Coupled Changes in Innate and Adaptive Immune Gene Expression in Two Case-Control Studies of Blood Microarrays in Major Depressive Disorder
Q92755600	Replication timing networks reveal a link between transcription regulatory circuits and replication timing control
Q47135602	Repositioning drugs by targeting network modules: a Parkinson's disease case study
Q46290789	Repression of TERMINAL FLOWER1 primarily mediates floral induction in pear (Pyrus pyrifolia Nakai) concomitant with change in gene expression of plant hormone-related genes and transcription factors.
Q35159836	Reprograming of gut microbiome energy metabolism by the FUT2 Crohn's disease risk polymorphism
Q30364621	Research Resource: Hormones, Genes, and Athleticism: Effect of Androgens on the Avian Muscular Transcriptome
Q42777206	Resilient protein co-expression network in male orbitofrontal cortex layer 2/3 during human aging
Q33643570	Resolving stem and progenitor cells in the adult mouse incisor through gene co-expression analysis
Q90628333	Resolving the Synaptic versus Developmental Dichotomy of Autism Risk Genes
Q104694014	Resource aromaticity affects bacterial community successions in response to different sources of dissolved organic matter
Q28597693	Response of Core Microbial Consortia to Chronic Hydrocarbon Contaminations in Coastal Sediment Habitats
Q37522133	Responses of Aspergillus flavus to Oxidative Stress Are Related to Fungal Development Regulator, Antioxidant Enzyme, and Secondary Metabolite Biosynthetic Gene Expression
Q92340897	Responses of Methanosarcina barkeri to acetate stress
Q34182768	Resting-state quantitative electroencephalography reveals increased neurophysiologic connectivity in depression
Q91451376	Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration
Q64242404	Retinal-input-induced epigenetic dynamics in the developing mouse dorsal lateral geniculate nucleus
Q35666295	Revealing Pathway Dynamics in Heart Diseases by Analyzing Multiple Differential Networks
Q64111855	Revealing the dominant long noncoding RNAs responding to the infection with Colletotrichum gloeosporioides in Hevea brasiliensis
Q37142800	Reversal of dendritic phenotypes in 16p11.2 microduplication mouse model neurons by pharmacological targeting of a network hub.
Q30943430	Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression Data
Q28083193	Reverse enGENEering of Regulatory Networks from Big Data: A Roadmap for Biologists
Q30584792	Reverse engineering: a key component of systems biology to unravel global abiotic stress cross-talk
Q35086178	Review of biological network data and its applications
Q42213040	Rewiring Host Lipid Metabolism by Large Viruses Determines the Fate of Emiliania huxleyi, a Bloom-Forming Alga in the Ocean
Q92561660	Rh type C-glycoprotein functions as a novel tumor suppressor gene by inhibiting tumorigenicity and metastasis in head and neck squamous cell carcinoma
Q91999618	Rhythms of Transcription in Field-Grown Sugarcane Are Highly Organ Specific
Q37637518	Rifampicin-Resistance Mutations in the rpoB Gene in Bacillus velezensis CC09 have Pleiotropic Effects
Q58716481	Robust Innate Immunity of Young Rabbits Mediates Resistance to Rabbit Hemorrhagic Disease Caused by Lagovirus Europaeus GI.1 But Not GI.2
Q38342896	Robust gene network analysis reveals alteration of the STAT5a network as a hallmark of prostate cancer.
Q52721418	Role of COL6A3 in colorectal cancer.
Q35043680	Role of tumor necrosis factor-α in the human systemic endotoxin-induced transcriptome
Q48062445	Root Cell-Specific Regulators of Phosphate-Dependent Growth
Q92212276	Root system traits impact early fire blight susceptibility in apple (Malus × domestica)
Q46304959	Root transcriptomic responses of grafted grapevines to heterogeneous nitrogen availability depend on rootstock genotype.
Q30955448	RulNet: A Web-Oriented Platform for Regulatory Network Inference, Application to Wheat -Omics Data
Q98216834	Rumen metaproteomics: closer to linking rumen microbial function to animal productivity traits
Q36063917	S100A12 Is Part of the Antimicrobial Network against Mycobacterium leprae in Human Macrophages
Q36191963	SABRE: a method for assessing the stability of gene modules in complex tissues and subject populations
Q33703148	SAK-HV Triggered a Short-period Lipid-lowering Biotherapy Based on the Energy Model of Liver Proliferation via a Novel Pathway
Q64114357	SALMON: Survival Analysis Learning With Multi-Omics Neural Networks on Breast Cancer
Q31112697	SIFORM: shared informative factor models for integration of multi-platform bioinformatic data
Q58785268	SILGGM: An extensive R package for efficient statistical inference in large-scale gene networks
Q28543673	SPINE: SParse eIgengene NEtwork linking gene expression clusters in Dehalococcoides mccartyi to perturbations in experimental conditions
Q47715149	SRR intronic variation inhibits expression of its neighbouring SMG6 gene and protects against temporal lobe epilepsy
Q92308874	STAT3 speeds up progression of osteoarthritis through NF-κB signaling pathway
Q93174238	STAT3-dependent analysis reveals PDK4 as independent predictor of recurrence in prostate cancer
Q60469724	STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
Q35211540	Sandbox University: estimating influence of institutional action
Q35972308	Scaling nitrogen and carbon interactions: what are the consequences of biological buffering?
Q88785652	Scallop genome provides insights into evolution of bilaterian karyotype and development
Q36233760	Scavenger receptor class A member 5 (SCARA5) and suprabasin (SBSN) are hub genes of coexpression network modules associated with peripheral vein graft patency
Q98195428	Scion genotypes exert long distance control over rootstock transcriptome responses to low phosphate in grafted grapevine
Q99563569	Screening and evaluation of key genes in contributing to pathogenesis of hepatic fibrosis based on microarray data
Q43210374	Screening feature genes of lung carcinoma with DNA microarray analysis
Q30855264	Screening genes crucial for pediatric pilocytic astrocytoma using weighted gene coexpression network analysis combined with methylation data analysis
Q42124782	Screening of Critical Genes and MicroRNAs in Blood Samples of Patients with Ruptured Intracranial Aneurysms by Bioinformatic Analysis of Gene Expression Data.
Q96953672	Screening of Potential Key Transcripts Involved in Planarian Regeneration and Analysis of Its Regeneration Patterns by PacBio Long-Read Sequencing
Q64269841	Screening of disorders associated with osteosarcoma by integrated network analysis
Q91784757	Screening of immunosuppressive factors for biomarkers of breast cancer malignancy phenotypes and subtype-specific targeted therapy
Q64077018	Screening of important lncRNAs associated with the prognosis of lung adenocarcinoma, based on integrated bioinformatics analysis
Q38430904	Screening of the prognostic targets for breast cancer based co-expression modules analysis
Q47216868	Sea Anemones: Quiet Achievers in the Field of Peptide Toxins
Q55313331	Sea cucumber genome provides insights into saponin biosynthesis and aestivation regulation.
Q38894128	Searching for convergent pathways in autism spectrum disorders: insights from human brain transcriptome studies.
Q37708386	Seasonal changes in gene expression represent cell-type composition in whole blood
Q35645952	Seasonal effects on gene expression
Q39109683	Seasonal gene expression in a migratory songbird
Q58765564	Seasonal plasticity of cognition and related biological measures in adults with and without Alzheimer disease: Analysis of multiple cohorts
Q42159019	Sebaceous Gland Atrophy in Psoriasis: An Explanation for Psoriatic Alopecia?
Q46268579	Secretagogin is Expressed by Developing Neocortical GABAergic Neurons in Humans but not Mice and Increases Neurite Arbor Size and Complexity
Q88406382	Seed Dormancy Involves a Transcriptional Program That Supports Early Plastid Functionality during Imbibition
Q38666340	Seed weight differences between wild and domesticated soybeans are associated with specific changes in gene expression.
Q35657383	Seedling development traits in Brassica napus examined by gene expression analysis and association mapping
Q33836622	Selecting biologically informative genes in co-expression networks with a centrality score
Q37137302	Selection for drinking in the dark alters brain gene coexpression networks.
Q91705233	Selective vulnerability in neurodegenerative diseases
Q41918921	Self-Organized Cerebral Organoids with Human-Specific Features Predict Effective Drugs to Combat Zika Virus Infection
Q91865402	Sensory experience remodels genome architecture in neural circuit to drive motor learning
Q38845473	Separate and combined effects of genetic variants and pre-treatment whole blood gene expression on response to exposure-based cognitive behavioural therapy for anxiety disorders
Q58573918	Serum level of co-expressed hub miRNAs as diagnostic and prognostic biomarkers for pancreatic ductal adenocarcinoma
Q90050436	Serum metabolites associate with lipid phenotypes among Bogalusa Heart Study participants
Q35027763	Serum metabolomics of slow vs. rapid motor progression Parkinson's disease: a pilot study
Q39201133	Severe acute dehydration in a desert rodent elicits a transcriptional response that effectively prevents kidney injury
Q64094866	Sex Differences in Older Adults' Immune Responses to Seasonal Influenza Vaccination
Q92966940	Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis
Q37524578	Sex differences in the human peripheral blood transcriptome
Q92163655	Sex-Biased lncRNAs Inversely Correlate With Sex-Opposite Gene Coexpression Networks in Diversity Outbred Mouse Liver
Q64241127	Sex-Specific Co-expression Networks and Sex-Biased Gene Expression in the Salmonid Brook Charr
Q92352593	Shannon entropy approach reveals relevant genes in Alzheimer's disease
Q58084076	Shared and distinct transcriptomic cell types across neocortical areas
Q61798137	Shared cis-regulatory architecture identified across defense response genes is associated with broad-spectrum quantitative resistance in rice
Q50034912	Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap.
Q95328349	Shared proteomic effects of cerebral atherosclerosis and Alzheimer's disease on the human brain
Q90091418	Shared transcriptional responses to con- and heterospecific behavioral antagonists in a wild songbird
Q58769540	Shedding Light on Chemically Mediated Tri-Trophic Interactions: A H-NMR Network Approach to Identify Compound Structural Features and Associated Biological Activity
Q91997267	Shiny-Seq: advanced guided transcriptome analysis
Q54981845	Sigmoid colon mucosal gene expression supports alterations of neuronal signaling in irritable bowel syndrome with constipation.
Q93116011	Signaling pathways and gene co-expression modules associated with cytoskeleton and axon morphology in breast cancer survivors with chronic paclitaxel-induced peripheral neuropathy
Q35907894	Signatures of early frailty in the gut microbiota
Q64907450	Signatures of photo-aging and intrinsic aging in skin were revealed by transcriptome network analysis.
Q49969287	Signatures of selection in embryonic transcriptomes of lizards adapting in parallel to cool climate.
Q33484422	Signed weighted gene co-expression network analysis of transcriptional regulation in murine embryonic stem cells
Q93140429	Significantly dysregulated genes in osteoarthritic labrum cells identified through gene expression profiling
Q35697406	Significantly reduced function of T cells in patients with acute arterial thrombosis
Q91802440	Single Cell Gene Co-Expression Network Reveals FECH/CROT Signature as a Prognostic Marker
Q92535164	Single Cell and Single Nucleus RNA-Seq Reveal Cellular Heterogeneity and Homeostatic Regulatory Networks in Adult Mouse Stria Vascularis
Q41309339	Single cardiomyocyte nuclear transcriptomes reveal a lincRNA-regulated de-differentiation and cell cycle stress-response in vivo
Q64122294	Single cell RNA sequencing identifies unique inflammatory airspace macrophage subsets
Q58563392	Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development
Q64062038	Single cell transcriptomic analysis of human mesenchymal stem cells reveals limited heterogeneity
Q89926273	Single cell transcriptomics identifies focal segmental glomerulosclerosis remission endothelial biomarker
Q34673769	Single-Cell Analysis in Cancer Genomics
Q90205334	Single-Cell RNA Sequencing of hESC-Derived 3D Retinal Organoids Reveals Novel Genes Regulating RPC Commitment in Early Human Retinogenesis
Q64071552	Single-Cell RNA-Seq Technologies and Related Computational Data Analysis
Q52677022	Single-Cell RNA-Seq of Mouse Dopaminergic Neurons Informs Candidate Gene Selection for Sporadic Parkinson Disease.
Q55109486	Single-Cell Transcriptome Analysis of Neural Stem Cells.
Q95272517	Single-Cell Transcriptomic Analysis Reveals Mitochondrial Dynamics in Oocytes of Patients With Polycystic Ovary Syndrome
Q92826927	Single-cell RNA-seq reveals TOX as a key regulator of CD8+ T cell persistence in chronic infection
Q99708214	Single-cell RNA-seq reveals different subsets of non-specific cytotoxic cells in teleost
Q37202339	Single-cell RNA-seq reveals distinct injury responses in different types of DRG sensory neurons
Q38729399	Single-cell RNA-seq reveals lincRNA expression differences in Hela-S3 cells
Q99576103	Single-cell genomics to understand disease pathogenesis
Q103002632	Single-cell network biology for resolving cellular heterogeneity in human diseases
Q36949940	Single-cell transcriptional analysis of normal, aberrant, and malignant hematopoiesis in zebrafish
Q36852027	Single-cell transcriptome analyses reveal signals to activate dormant neural stem cells
Q92860630	Single-cell transcriptome analysis of CD8 + T-cell memory inflation
Q118110090	Single-cell transcriptome reveals cell division-regulated hub genes in the unicellular eukaryote Paramecium
Q90284294	Single-cell transcriptomes of the regenerating intestine reveal a revival stem cell
Q92946453	Single-cell transcriptomic analysis of tissue-resident memory T cells in human lung cancer
Q101226536	Singular manifolds of proteomic drivers to model the evolution of inflammatory bowel disease status
Q48206813	Skin transcriptome reveals the dynamic changes in the Wnt pathway during integument morphogenesis of chick embryos
Q49598009	Small GTPase immunity associated proteins mediate resistance to Toxoplasma gondii infection in Lewis rat.
Q47734878	Small Nuclear Ribonucleoprotein Polypeptide A-Mediated Alternative Polyadenylation of STAT5B during Th1 Cell Differentiation
Q93148843	Small Nucleolar RNA 71A Promotes Lung Cancer Cell Proliferation, Migration and Invasion via MAPK/ERK Pathway
Q47967815	Social network architecture of human immune cells unveiled by quantitative proteomics
Q61449717	Social status alters chromatin accessibility and the gene regulatory response to glucocorticoid stimulation in rhesus macaques
Q39371454	Somatosensory Neuron Typing with High-Coverage Single-Cell RNA Sequencing and Functional Analysis
Q36751641	Somatosensory neuron types identified by high-coverage single-cell RNA-sequencing and functional heterogeneity
Q55315462	Sorting Five Human Tumor Types Reveals Specific Biomarkers and Background Classification Genes.
Q33786322	Sox5 regulates beta-cell phenotype and is reduced in type 2 diabetes
Q35088941	Sparse expression bases in cancer reveal tumor drivers
Q35031432	Spatial transcriptomes of iron-deficient and cadmium-stressed rice
Q50435828	Spatial-temporal transcriptional dynamics of long non-coding RNAs in human brain.
Q57896162	Spatio-temporal expression dynamics differ between homologues of flowering time genes in the allopolyploid Brassica napus
Q98164628	Spatiotemporal DNA methylome dynamics of the developing mouse fetus
Q92013981	Spatiotemporal Gene Coexpression and Regulation in Mouse Cardiomyocytes of Early Cardiac Morphogenesis
Q36341494	Spatiotemporal Transcriptome Analysis Provides Insights into Bicolor Tepal Development in Lilium "Tiny Padhye".
Q35821146	Spatiotemporal dynamics of the postnatal developing primate brain transcriptome
Q46852287	Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex
Q52600196	Spatiotemporal heterogeneity and patterning of developing renal blood vessels.
Q38177646	Spatiotemporal positioning of multipotent modules in diverse biological networks
Q90462336	Spatiotemporal transcriptomic divergence across human and macaque brain development
Q91817298	Species specific gene expression dynamics during harmful algal blooms
Q64937673	Species-Specific Changes in a Primate Transcription Factor Network Provide Insights into the Molecular Evolution of the Primate Prefrontal Cortex.
Q90613277	Species-specific molecular responses of wild coral reef fishes during a marine heatwave
Q90401711	Specific Glioma Prognostic Subtype Distinctions Based on DNA Methylation Patterns
Q36323903	Specific expression of novel long non-coding RNAs in high-hyperdiploid childhood acute lymphoblastic leukemia
Q90754584	Specific glioblastoma multiforme prognostic-subtype distinctions based on DNA methylation patterns
Q33569285	Spemann organizer transcriptome induction by early beta-catenin, Wnt, Nodal, and Siamois signals in Xenopus laevis.
Q42777768	Spontaneous generation of a novel foetal human retinal pigment epithelium (RPE) cell line available for investigation on phagocytosis and morphogenesis.
Q35108162	Stability indicators in network reconstruction
Q34855896	Stage-specific transcription during development of Aedes aegypti
Q55080809	Stat5b Regulates Sexually Dimorphic Gene Expression in Zebrafish Liver.
Q36240390	Statistical Approaches for Gene Selection, Hub Gene Identification and Module Interaction in Gene Co-Expression Network Analysis: An Application to Aluminum Stress in Soybean (Glycine max L.).
Q38871053	Stereotypical Metabolic Response to Endoscopic Retrograde Cholangiopancreatography Show Alterations in Pancreatic Function Regardless of Post-Procedure Pancreatitis
Q31004622	Stochastic variation of transcript abundance in C57BL/6J mice
Q64096838	Strand-specific RNA-seq based identification and functional prediction of drought-responsive lncRNAs in cassava
Q33981973	Strategies for aggregating gene expression data: the collapseRows R function
Q89747612	Stress genomics revisited: gene co-expression analysis identifies molecular signatures associated with childhood adversity
Q104509590	Stress induces divergent gene expression among lateral habenula efferent pathways
Q58778781	Striatal transcriptome of a mouse model of ADHD reveals a pattern of synaptic remodeling
Q101121035	Stromal microenvironment promoted infiltration in esophageal adenocarcinoma and squamous cell carcinoma: a multi-cohort gene-based analysis
Q57025321	Structural Remodeling of the Human Colonic Mesenchyme in Inflammatory Bowel Disease
Q42603845	Structural measures for network biology using QuACN
Q97595754	Structure and co-occurrence patterns of bacterial communities associated with white faeces disease outbreaks in Pacific white-leg shrimp Penaeus vannamei aquaculture
Q92298678	Study on gene expression patterns and functional pathways of peripheral blood monocytes reveals potential molecular mechanism of surgical treatment for periodontitis
Q37597298	Studying hematopoiesis using single-cell technologies
Q42364603	Subclass-specific IgG glycosylation is associated with markers of inflammation and metabolic health
Q100533938	Subependymal giant cell astrocytomas are characterized by mTORC1 hyperactivation, a very low somatic mutation rate, and a unique gene expression profile
Q37688454	Subpathway-LNCE: Identify dysfunctional subpathways competitively regulated by lncRNAs through integrating lncRNA-mRNA expression profile and pathway topologies
Q42682601	Substantial contribution of genetic variation in the expression of transcription factors to phenotypic variation revealed by eRD-GWAS.
Q58765389	Subtle left-right asymmetry of gene expression profiles in embryonic and foetal human brains
Q92086214	Subtyping of microsatellite instability-high colorectal cancer
Q46115500	Sugar metabolism reprogramming in a non-climacteric bud mutant of a climacteric plum fruit during development on the tree
Q36405748	Sulforaphane reduces hepatic glucose production and improves glucose control in patients with type 2 diabetes.
Q92534099	Super-Enhancer-Associated Hub Genes In Chronic Myeloid Leukemia Identified Using Weighted Gene Co-Expression Network Analysis
Q41188423	Supervised clustering based on DPClusO: prediction of plant-disease relations using Jamu formulas of KNApSAcK database
Q38288935	Supervised, semi-supervised and unsupervised inference of gene regulatory networks.
Q59807733	Supragingival Plaque Microbiome Ecology and Functional Potential in the Context of Health and Disease
Q92063280	Surrogate minimal depth as an importance measure for variables in random forests
Q90705707	Survival-related risk score of lung adenocarcinoma identified by weight gene co-expression network analysis
Q61454597	Symbiont type and environmental factors affect transcriptome-wide gene expression in the coral
Q88874297	Synaptic activity induces input-specific rearrangements in a targeted synaptic protein interaction network
Q37458257	Synaptic microRNAs Coordinately Regulate Synaptic mRNAs: Perturbation by Chronic Alcohol Consumption.
Q98465562	Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803
Q38696402	System analysis identifies distinct and common functional networks governed by transcription factor ASCL1, in glioma and small cell lung cancer.
Q64121856	System network analysis of genomics and transcriptomics data identified type 1 diabetes-associated pathway and genes
Q64067916	Systematic Analysis of Non-coding RNAs Involved in the Angora Rabbit (Oryctolagus cuniculus) Hair Follicle Cycle by RNA Sequencing
Q38877820	Systematic DNA methylation analysis of multiple cell lines reveals common and specific patterns within and across tissues of origin.
Q35895321	Systematic Identification and Characterization of Long Non-Coding RNAs in the Silkworm, Bombyx mori
Q36255505	Systematic Tracking of Disrupted Modules Identifies Altered Pathways Associated with Congenital Heart Defects in Down Syndrome.
Q37722131	Systematic analysis of microarray datasets to identify Parkinson's disease‑associated pathways and genes
Q92062763	Systematic genetic analyses of GWAS data reveal an association between the immune system and insomnia
Q50791909	Systematic model of peripheral inflammation after subarachnoid hemorrhage.
Q38819329	Systematic review of blood transcriptome profiling in neuropsychiatric disorders: guidelines for biomarker discovery
Q37687577	Systematically characterizing dysfunctional long intergenic non-coding RNAs in multiple brain regions of major psychosis
Q36917429	Systemic Transcriptional Alterations of Innate and Adaptive Immune Signaling Pathways in Atherosclerosis, Ischemia Stroke, and Myocardial Infarction
Q38964295	Systemic innate immune activation in food protein-induced enterocolitis syndrome
Q64899850	Systems Analyses Reveal Physiological Roles and Genetic Regulators of Liver Lipid Species.
Q36879291	Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures
Q47397587	Systems Bioinformatics: increasing precision of computational diagnostics and therapeutics through network-based approaches
Q36527837	Systems Biology Approaches and Applications in Obesity, Diabetes, and Cardiovascular Diseases
Q28068488	Systems Biology Approaches for Host-Fungal Interactions: An Expanding Multi-Omics Frontier
Q39166204	Systems Biomedicine of Rabies Delineates the Affected Signaling Pathways.
Q37682494	Systems Genetics Approach Identifies Gene Pathways and Adamts2 as Drivers of Isoproterenol-Induced Cardiac Hypertrophy and Cardiomyopathy in Mice
Q39157823	Systems Genetics Identifies a Novel Regulatory Domain of Amylose Synthesis.
Q39117056	Systems Genetics as a Tool to Identify Master Genetic Regulators in Complex Disease
Q28709047	Systems analysis of human brain gene expression: mechanisms for HIV-associated neurocognitive impairment and common pathways with Alzheimer's disease
Q36907609	Systems analysis of primary Sjögren's syndrome pathogenesis in salivary glands identifies shared pathways in human and a mouse model
Q30758631	Systems analysis of transcriptional data provides insights into muscle's biological response to botulinum toxin
Q30764648	Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments
Q64912987	Systems analysis reveals complex biological processes during virus infection fate decisions.
Q38743031	Systems approaches in osteoarthritis: Identifying routes to novel diagnostic and therapeutic strategies
Q89876173	Systems biology analysis of publicly available transcriptomic data reveals a critical link between AKR1B10 gene expression, smoking and occurrence of lung cancer
Q89832525	Systems biology approach identifies functional modules and regulatory hubs related to secondary metabolites accumulation after transition from autotrophic to heterotrophic growth condition in microalgae
Q38051560	Systems biology approaches to finding novel pain mediators
Q38864037	Systems biology of facial development: contributions of ectoderm and mesenchyme
Q38339429	Systems biology of ovine intestinal parasite resistance: disease gene modules and biomarkers
Q28081359	Systems biology of polycystic kidney disease: a critical review
Q35528097	Systems biology with high-throughput sequencing reveals genetic mechanisms underlying the metabolic syndrome in the Lyon hypertensive rat.
Q50063222	Systems genetic analysis of brown adipose tissue function.
Q56358012	Systems genetic analysis of inversion polymorphisms in the malaria mosquito
Q30422958	Systems genetic analysis of osteoblast-lineage cells
Q47912001	Systems genetics analysis of pharmacogenomics variation during antidepressant treatment.
Q91658665	Systems genetics applications in metabolism research
Q46067590	Systems genetics identifies a co-regulated module of liver microRNAs associated with plasma LDL cholesterol in murine diet-induced dyslipidemia
Q40183800	Systems genetics identifies a convergent gene network for cognition and neurodevelopmental disease
Q36784766	Systems genetics of environmental response in the mature wheat embryo
Q35786354	Systems genetics of susceptibility to obesity-induced diabetes in mice
Q38440198	Systems genetics reveals a transcriptional network associated with susceptibility in the maize-grey leaf spot pathosystem.
Q30417371	Systems genetics: a novel approach to dissect the genetic basis of osteoporosis
Q50041670	Systems genomics study reveals expression quantitative trait loci, regulator genes and pathways associated with boar taint in pigs.
Q34888501	Systems level analysis of systemic sclerosis shows a network of immune and profibrotic pathways connected with genetic polymorphisms.
Q37072911	Systems view of adipogenesis via novel omics-driven and tissue-specific activity scoring of network functional modules
Q58086434	Systems-Wide Approaches in Induced Pluripotent Stem Cell Models
Q91028339	Systems-level analysis identifies key regulators driving epileptogenesis in temporal lobe epilepsy
Q30422887	Systems-level analysis of genome-wide association data
Q38660731	Systems-level organization of non-alcoholic fatty liver disease progression network.
Q92930064	T cell receptor signaling pathway and cytokine-cytokine receptor interaction affect the rehabilitation process after respiratory syncytial virus infection
Q36215165	T-cell exhaustion, co-stimulation and clinical outcome in autoimmunity and infection.
Q38430526	T2DiACoD: A Gene Atlas of Type 2 Diabetes Mellitus Associated Complex Disorders.
Q40066649	TCR-pMHC encounter differentially regulates transcriptomes of(-) tissue-resident CD8 T cells.
Q26786118	TIN: An R Package for Transcriptome Instability Analysis
Q55455470	TMEM106B haplotypes have distinct gene expression patterns in aged brain.
Q37410116	Targeted Differentiation of Regional Ventral Neuroprogenitors and Related Neuronal Subtypes from Human Pluripotent Stem Cells
Q64278096	Targeted deletion of Tcf7l2 in adipocytes promotes adipocyte hypertrophy and impaired glucose metabolism
Q41918662	Targeted sequencing and functional analysis reveal brain-size-related genes and their networks in autism spectrum disorders
Q97517727	Targeting the MAPK7/MMP9 axis for metastasis in primary bone cancer
Q46304951	Targeting the Myofibroblastic Cancer-Associated Fibroblast Phenotype Through Inhibition of NOX4.
Q27313627	Tau overexpression impacts a neuroinflammation gene expression network perturbed in Alzheimer's disease
Q30866978	Taxonomic and functional diversity provides insight into microbial pathways and stress responses in the saline Qinghai Lake, China
Q39284486	Temperature controls on the basal emission rate of isoprene in a tropical tree Ficus septica: exploring molecular regulatory mechanisms.
Q93183819	Temperature-dependent vitamin D signaling regulates developmental trajectory associated with diapause in an annual killifish
Q63508240	Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum
Q47381761	Temporal analysis of hippocampal CA3 gene co-expression networks in a rat model of febrile seizures
Q64921994	Temporal expression and functional analysis of long non-coding RNAs in colorectal cancer initiation.
Q39032522	Temporal network analysis identifies early physiological and transcriptomic indicators of mild drought in Brassica rapa.
Q59792979	Temporal proteomic profiling of postnatal human cortical development
Q22337323	Temporal specification and bilaterality of human neocortical topographic gene expression
Q94464926	Temporal transcriptome analysis of neuronal commitment reveals the preeminent role of the divergent lncRNA biotype and a critical candidate gene during differentiation
Q35829002	Temporal transcriptomics suggest that twin-peaking genes reset the clock
Q46267199	Temporal variation in brain transcriptome is associated with the expression of female mimicry as a sequential male alternative reproductive tactic in fish.
Q50332191	Ten hub genes associated with progression and prognosis of pancreatic carcinoma identified by co-expression analysis.
Q35878842	Testing the Critical Window Hypothesis of Timing and Duration of Estradiol Treatment on Hypothalamic Gene Networks in Reproductively Mature and Aging Female Rats
Q36941415	The Association Between Low Back Pain and Composition of IgG Glycome
Q98771218	The Better Survival of MSI Subtype Is Associated With the Oxidative Stress Related Pathways in Gastric Cancer
Q91908270	The CCN1 (CYR61) protein promotes skin growth by enhancing epithelial-mesenchymal transition during skin expansion
Q52607313	The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma.
Q92255394	The Circadian Protein Nocturnin Regulates Metabolic Adaptation in Brown Adipose Tissue
Q96306220	The Construction and Analysis of lncRNA-miRNA-mRNA Competing Endogenous RNA Network of Schwann Cells in Diabetic Peripheral Neuropathy
Q30361391	The Correlation-Base-Selection Algorithm for Diagnostic Schizophrenia Based on Blood-Based Gene Expression Signatures
Q57026735	The DNA repair transcriptome in severe COPD
Q88792849	The Defense Phytohormone Signaling Network Enables Rapid, High-Amplitude Transcriptional Reprogramming during Effector-Triggered Immunity
Q36204069	The Drosophila transcriptional network is structured by microbiota.
Q38452502	The Dynamics of Transcript Abundance during Cellularization of Developing Barley Endosperm
Q97644648	The Effect of Inflammation on the Formation of Thyroid Nodules
Q36782818	The Effect of Sustained Inflammation on Hepatic Mevalonate Pathway Results in Hyperglycemia
Q100728409	The Endometrial Transcription Landscape of MRKH Syndrome
Q39093200	The Evolution of Soybean Knowledge Base (SoyKB).
Q92652637	The Expression and Effection of MicroRNA-499a in High-Tobacco Exposed Head and Neck Squamous Cell Carcinoma: A Bioinformatic Analysis
Q92224280	The GATA transcription factor GNC plays an important role in photosynthesis and growth in poplar
Q99634252	The Genetic Architecture of Carbon Tetrachloride-Induced Liver Fibrosis in Mice
Q64355379	The Genetic Architecture of Diet-Induced Hepatic Fibrosis in Mice
Q48563763	The Human Cell Atlas: Technical approaches and challenges.
Q30276950	The Hybrid Mouse Diversity Panel: a resource for systems genetics analyses of metabolic and cardiovascular traits
Q52720878	The Immune Landscape of Cancer.
Q49829421	The Immune and Non-Immune Pathways That Drive Chronic Gastrointestinal Helminth Burdens in the Wild.
Q46284246	The JASMONATE ZIM-Domain Gene Family Mediates JA Signaling and Stress Response in Cotton
Q64236717	The Long Non-coding RNA NRIR Drives IFN-Response in Monocytes: Implication for Systemic Sclerosis
Q58805095	The Long Noncoding RNA Landscape in Amygdala Tissues from Schizophrenia Patients
Q91966034	The Major Factors Causing the Microspore Abortion of Genic Male Sterile Mutant NWMS1 in Wheat (Triticum aestivum L.).
Q90334099	The Need for Multi-Omics Biomarker Signatures in Precision Medicine
Q92616530	The Potential Link between Gut Microbiota and Serum TRAb in Chinese Patients with Severe and Active Graves' Orbitopathy
Q98771252	The Potential of Five Immune-Related Prognostic Genes to Predict Survival and Response to Immune Checkpoint Inhibitors for Soft Tissue Sarcomas Based on Multi-Omic Study
Q92062254	The Predicted Key Molecules, Functions, and Pathways That Bridge Mild Cognitive Impairment (MCI) and Alzheimer's Disease (AD)
Q38578754	The RNA world in the 21st century-a systems approach to finding non-coding keys to clinical questions.
Q61448156	The Role of COL5A2 in Patients With Muscle-Invasive Bladder Cancer: A Bioinformatics Analysis of Public Datasets Involving 787 Subjects and 29 Cell Lines
Q90734871	The Role of EGFR in Influenza Pathogenicity: Multiple Network-Based Approaches to Identify a Key Regulator of Non-lethal Infections
Q47118511	The Role of Eif6 in Skeletal Muscle Homeostasis Revealed by Endurance Training Co-expression Networks
Q90189943	The Role of Gibberellins in Regulation of Nitrogen Uptake and Physiological Traits in Maize Responding to Nitrogen Availability
Q36155222	The Role of Vitamin D in the Transcriptional Program of Human Pregnancy
Q93359680	The Stanley Neuropathology Consortium Integrative Database (SNCID) for Psychiatric Disorders
Q64296187	The Systems Architecture of Molecular Memory in Poplar after Abiotic Stress
Q45248037	The Tale of a Neglected Energy Source: Elevated Hydrogen Exposure Affects both Microbial Diversity and Function in Soil
Q93051446	The Transcriptional Regulator Hbx1 Affects the Expression of Thousands of Genes in the Aflatoxin-Producing Fungus Aspergillus flavus
Q60919501	The Transcriptomic Landscape of Yaks Reveals Molecular Pathways for High Altitude Adaptation
Q89687104	The Translational Potential of Neuroimaging Genomic Analyses To Diagnosis And Treatment In The Mental Disorders
Q92448032	The Use of PTI-Marker Genes to Identify Novel Compounds that Establish Induced Resistance in Rice
Q35836298	The WRKY transcription factor family and senescence in switchgrass.
Q35042693	The WWOX gene modulates high-density lipoprotein and lipid metabolism
Q104795301	The amino acid transporter SLC7A5 is required for efficient growth of KRAS-mutant colorectal cancer
Q89640479	The application of weighted gene co-expression network analysis in identifying key modules and hub genes associated with disease status in Alzheimer's disease
Q91387530	The apricot (Prunus armeniaca L.) genome elucidates Rosaceae evolution and beta-carotenoid synthesis
Q42953371	The association of multiple interacting genes with specific phenotypes in rice using gene coexpression networks
Q49680366	The biotrophic development of Ustilago maydis studied by RNAseq analysis.
Q37405973	The bronchial epithelial cell bacterial microbiome and host response in patients infected with human immunodeficiency virus
Q92172616	The cell fate regulator NUPR1 is induced by Mycobacterium leprae via type I interferon in human leprosy
Q28648405	The cerebellum ages slowly according to the epigenetic clock
Q90754198	The chromosome-scale reference genome of black pepper provides insight into piperine biosynthesis
Q90363031	The circadian gene Nr1d1 in the mouse nucleus accumbens modulates sociability and anxiety-related behaviour
Q90620485	The clinical significance of collagen family gene expression in esophageal squamous cell carcinoma
Q90428126	The co-expression networks of differentially expressed RBPs with TFs and LncRNAs related to clinical TNM stages of cancers
Q33742645	The common transcriptional subnetworks of the grape berry skin in the late stages of ripening
Q89553975	The cox-filter method identifies respective subtype-specific lncRNA prognostic signatures for two human cancers
Q89656423	The detection and analysis of differential regulatory communities in lung cancer
Q88931799	The developmental dynamics of the Populus stem transcriptome
Q93129583	The developmental origins of sex-biased expression in cardiac development
Q39499573	The developmental transcriptome atlas of the biofuel crop Camelina sativa
Q97561878	The differential expression patterns and co-expression networks of paralogs as an indicator of the TNM stages of lung adenocarcinoma and squamous cell carcinoma
Q41284448	The dynamic landscape of gene regulation during Bombyx mori oogenesis
Q36057638	The effects of age and dietary restriction on the tissue-specific metabolome of Drosophila.
Q90216506	The four‑microRNA signature identified by bioinformatics analysis predicts the prognosis of nasopharyngeal carcinoma patients
Q36411019	The gene expression landscape of pine seedling tissues.
Q96229566	The genetic basis of sex determination in grapes
Q37544241	The genetics of quantitative traits: challenges and prospects
Q91677261	The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication
Q51171030	The genomics of recovery from coral bleaching.
Q94592321	The gut microbiome modulates gut-brain axis glycerophospholipid metabolism in a region-specific manner in a nonhuman primate model of depression
Q90430576	The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration
Q61798938	The identification of gene signature and critical pathway associated with childhood-onset type 2 diabetes
Q33592056	The identification of key genes and pathways in hepatocellular carcinoma by bioinformatics analysis of high-throughput data
Q55298285	The influence of adolescent nicotine exposure on ethanol intake and brain gene expression.
Q41472371	The integrative metabolomic-transcriptomic landscape of glioblastome multiforme
Q58700858	The key genes and pathways related to male sterility of eggplant revealed by comparative transcriptome analysis
Q92196121	The kidney transcriptome, from single cells to whole organs and back
Q92135355	The landscape of DNA methylation associated with the transcriptomic network in layers and broilers generates insight into embryonic muscle development in chicken
Q63741593	The long noncoding RNA may regulate expression of several schizophrenia-related genes
Q68414290	The metaRbolomics Toolbox in Bioconductor and beyond
Q34460421	The metabolic profile of long-lived Drosophila melanogaster
Q39175548	The molecular basis of breast cancer pathological phenotypes
Q34531978	The network structure of human personality according to the NEO-PI-R: matching network community structure to factor structure
Q41112783	The pearl oyster Pinctada fucata martensii genome and multi-omic analyses provide insights into biomineralization
Q92220937	The persimmon (Diospyros oleifera Cheng) genome provides new insights into the inheritance of astringency and ancestral evolution
Q36179001	The polymyxin B-induced transcriptomic response of a clinical, multidrug-resistant Klebsiella pneumoniae involves multiple regulatory elements and intracellular targets
Q41493296	The potential role of genetic assimilation during maize domestication
Q89947010	The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus
Q97419158	The regulatory landscape of early maize inflorescence development
Q42290316	The relationship between selection, network connectivity, and regulatory variation within a population of Capsella grandiora
Q93185489	The relevance between the immune response-related gene module and clinical traits in head and neck squamous cell carcinoma
Q64259049	The rise of the distributions: why non-normality is important for understanding the transcriptome and beyond
Q89669905	The role of environmental stress and DNA methylation in the longitudinal course of bipolar disorder
Q38266033	The role of protein interaction networks in systems biomedicine.
Q37298146	The roles of FMRP-regulated genes in autism spectrum disorder: single- and multiple-hit genetic etiologies
Q36217922	The rs3957357C>T SNP in GSTA1 Is Associated with a Higher Risk of Occurrence of Hepatocellular Carcinoma in European Individuals
Q36070371	The sequenced rat brain transcriptome--its use in identifying networks predisposing alcohol consumption
Q36914938	The simple neuroendocrine-immune regulatory network in oyster Crassostrea gigas mediates complex functions
Q90155534	The single-cell eQTLGen consortium
Q34416881	The small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome
Q92540163	The spatial binding model of the pioneer factor Oct4 with its target genes during cell reprogramming
Q35102390	The synaptoneurosome transcriptome: a model for profiling the emolecular effects of alcohol
Q60044861	The temporal expression patterns of brain transcriptome during chicken development and ageing
Q90463164	The transcription factor POU3F2 regulates a gene coexpression network in brain tissue from patients with psychiatric disorders
Q30395786	The transcriptome of the reference potato genome Solanum tuberosum Group Phureja clone DM1-3 516R44.
Q38883467	The transcriptomic signature of developing soybean seeds reveals the genetic basis of seed trait adaptation during domestication
Q64232204	The unique composition of Indian gut microbiome, gene catalogue, and associated fecal metabolome deciphered using multi-omics approaches
Q64255320	The y-ome defines the 35% of Escherichia coli genes that lack experimental evidence of function
Q91993458	Three novel hub genes and their clinical significance in clear cell renal cell carcinoma
Q58694080	Tibetan Medical Formula Shi-Wei-Gan-Ning-Pill Protects Against Carbon Tetrachloride-Induced Liver Fibrosis - An NMR-Based Metabolic Profiling
Q37688740	Tidal heat pulses on a reef trigger a fine-tuned transcriptional response in corals to maintain homeostasis
Q61448609	Time matters! Developmental shift in gene expression between the head and the trunk region of the cichlid fish Astatotilapia burtoni
Q92751204	Time of day and network reprogramming during drought induced CAM photosynthesis in Sedum album
Q35175111	Time since onset of disease and individual clinical markers associate with transcriptional changes in uncomplicated dengue
Q35885037	Time-Course Analysis of Brain Regional Expression Network Responses to Chronic Intermittent Ethanol and Withdrawal: Implications for Mechanisms Underlying Excessive Ethanol Consumption
Q91894242	Time-series transcriptome provides insights into the gene regulation network involved in the volatile terpenoid metabolism during the flower development of lavender
Q59126893	Timing and Order of the Molecular Events Marking the Onset of Berry Ripening in Grapevine
Q60919571	Tissue-Specific Down-Regulation of the Long Non-Coding RNAs PCAT18 and LINC01133 in Gastric Cancer Development
Q64388357	Tissue-Specific Regulation of the Mouse Epigenome
Q64241042	Tissue-Specific Transcriptome Analysis Reveals Candidate Genes for Terpenoid and Phenylpropanoid Metabolism in the Medicinal Plant
Q36935501	Tissue-Specific and Genetic Regulation of Insulin Sensitivity-Associated Transcripts in African Americans.
Q57801212	Tissue-specific pathways and networks underlying sexual dimorphism in non-alcoholic fatty liver disease
Q57138032	To select relevant features for longitudinal gene expression data by extending a pathway analysis method
Q33564656	Toll-like receptor 4 in glial inflammatory responses to air pollution in vitro and in vivo
Q92958095	Topological Methods for Visualization and Analysis of High Dimensional Single-Cell RNA Sequencing Data
Q39015292	Topologically inferring pathway activity for precise survival outcome prediction: breast cancer as a case
Q33957849	ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems
Q50920420	Tracing differences between male and female breast cancer: both diseases own a different biology.
Q38862522	Tracing haematopoietic stem cell formation at single-cell resolution.
Q36393742	Tracking a century of changes in microbial eukaryotic diversity in lakes driven by nutrient enrichment and climate warming
Q64054431	Tracking transcriptomic responses to endogenous and exogenous variation in cetaceans in the Southern California Bight
Q55351697	Transcription Factor Binding Site Enrichment Analysis in Co-Expression Modules in Celiac Disease.
Q57881269	Transcription Factor Co-expression Networks of Adipose RNA-Seq Data Reveal Regulatory Mechanisms of Obesity
Q47198740	Transcription Factor and lncRNA Regulatory Networks Identify Key Elements in Lung Adenocarcinoma.
Q92543235	Transcription Profiles Reveal the Regulatory Synthesis of Phenols during the Development of Lotus Rhizome (Nelumbo nucifera Gaertn)
Q98567727	Transcription and DNA Methylation patterns of blood derived CD8+ T cells are associated with age and Inflammatory Bowel Disease but do not predict prognosis
Q91715741	Transcriptional Analysis of the Early Ripening of 'Kyoho' Grape in Response to the Treatment of Riboflavin
Q64107226	Transcriptional Analysis of the Human IgE-Expressing Plasma Cell Differentiation Pathway
Q38733673	Transcriptional Changes in the Mouse Retina after Ocular Blast Injury: A Role for the Immune System
Q92537954	Transcriptional Changes on Blight Fruiting Body of Flammulina velutipes Caused by Two New Bacterial Pathogens
Q92443838	Transcriptional Differences of Coding and Non-Coding Genes Related to the Absence of Melanocyte in Skins of Bama Pig
Q64247998	Transcriptional Dysregulation Study Reveals a Core Network Involving the Progression of Alzheimer's Disease
Q91178892	Transcriptional Network Analysis Implicates Altered Hepatic Immune Function in NASH development and resolution
Q90723317	Transcriptional Networks of Microglia in Alzheimer's Disease and Insights into Pathogenesis
Q36223807	Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation.
Q36176064	Transcriptional Profiling of Egg Allergy and Relationship to Disease Phenotype
Q92617764	Transcriptional Profiling of Stem Cells: Moving from Descriptive to Predictive Paradigms
Q42428739	Transcriptional Profiling of Th2 Cells Identifies Pathogenic Features Associated with Asthma
Q90480028	Transcriptional Regulation of Sorghum Stem Composition: Key Players Identified Through Co-expression Gene Network and Comparative Genomics Analyses
Q59807340	Transcriptional Signatures in Liver Reveal Metabolic Adaptations to Seasons in Migratory Blackheaded Buntings
Q89673969	Transcriptional Signatures of Tau and Amyloid Neuropathology
Q55047168	Transcriptional analyses provide new insight into the late-stage immune response of a diseased Caribbean coral.
Q96136255	Transcriptional analyses reveal the molecular mechanism governing shade tolerance in the invasive plant Solidago canadensis
Q92643364	Transcriptional analysis identifies potential biomarkers and molecular regulators in pneumonia and COPD exacerbation
Q36283347	Transcriptional analysis of defense mechanisms in upland tetraploid switchgrass to greenbugs
Q27318523	Transcriptional and Hormonal Regulation of Gravitropism of Woody Stems in Populus
Q47162545	Transcriptional and Hormonal Regulation of Weeping Trait in Salix matsudana.
Q35824601	Transcriptional and Linkage Analyses Identify Loci that Mediate the Differential Macrophage Response to Inflammatory Stimuli and Infection
Q33353813	Transcriptional and metabolic analysis of senescence induced by preventing pollination in maize
Q92325200	Transcriptional and metabolic rewiring of colorectal cancer cells expressing the oncogenic KRASG13D mutation
Q38985973	Transcriptional coexpression network reveals the involvement of varying stem cell features with different dysregulations in different gastric cancer subtypes
Q34000852	Transcriptional consequences of 16p11.2 deletion and duplication in mouse cortex and multiplex autism families
Q33631126	Transcriptional dissection of melanoma identifies a high-risk subtype underlying TP53 family genes and epigenome deregulation
Q91151459	Transcriptional dysregulation by a nucleus-localized aminoacyl-tRNA synthetase associated with Charcot-Marie-Tooth neuropathy
Q33683488	Transcriptional landscape of epithelial and immune cell populations revealed through FACS-seq of healthy human skin
Q33926910	Transcriptional landscape of the prenatal human brain
Q38448870	Transcriptional modules related to hepatocellular carcinoma survival: coexpression network analysis
Q87224605	Transcriptional network analysis for the regulation of left ventricular hypertrophy and microvascular remodeling
Q38435692	Transcriptional network analysis in frontal cortex in Lewy body diseases with focus on dementia with Lewy bodies
Q58770954	Transcriptional network analysis of human astrocytic endfoot genes reveals region-specific associations with dementia status and tau pathology
Q87071776	Transcriptional networks implicated in human nonalcoholic fatty liver disease
Q46475041	Transcriptional networks in whole blood of asthmatics
Q34174494	Transcriptional profiles of bovine in vivo pre-implantation development.
Q35135435	Transcriptional profiling of Petunia seedlings reveals candidate regulators of the cold stress response
Q90522435	Transcriptional profiling of isogenic Friedreich ataxia neurons and effect of an HDAC inhibitor on disease signatures
Q55259324	Transcriptional profiling reveals extraordinary diversity among skeletal muscle tissues.
Q93115962	Transcriptional profiling unveils type I and II interferon networks in blood and tissues across diseases
Q104486485	Transcriptional regulation of bark freezing tolerance in apple (Malus domestica Borkh.).
Q61447938	Transcriptional regulatory networks controlling taste and aroma quality of apricot (Prunus armeniaca L.) fruit during ripening
Q34339944	Transcriptional response to cardiac injury in the zebrafish: systematic identification of genes with highly concordant activity across in vivo models.
Q47098607	Transcriptional signatures of schizophrenia in hiPSC-derived NPCs and neurons are concordant with post-mortem adult brains.
Q64115457	Transcriptome Analyses of Heart and Liver Reveal Novel Pathways for Regulating Songbird Migration
Q90248516	Transcriptome Analysis Identifies Two Ethylene Response Factors That Regulate Proanthocyanidin Biosynthesis During Malus Crabapple Fruit Development
Q26766287	Transcriptome Analysis in Domesticated Species: Challenges and Strategies
Q89422225	Transcriptome Analysis of Adipose Tissue Indicates That the cAMP Signaling Pathway Affects the Feed Efficiency of Pigs
Q36132402	Transcriptome Analysis of CD4+ T Cells in Coeliac Disease Reveals Imprint of BACH2 and IFNγ Regulation
Q55452737	Transcriptome Analysis of Gelatin Seed Treatment as a Biostimulant of Cucumber Plant Growth.
Q59792193	Transcriptome Analysis of Oleoresin-Producing Tree and Characterization of Sesquiterpene Synthases
Q92972601	Transcriptome Analysis of Small Molecule-Mediated Astrocyte-to-Neuron Reprogramming
Q91965156	Transcriptome Analysis of Wheat Roots Reveals a Differential Regulation of Stress Responses Related to Arbuscular Mycorrhizal Fungi and Soil Disturbance
Q35009187	Transcriptome Analysis of the Human Striatum in Tourette Syndrome
Q64062444	Transcriptome Analysis of the Human Tibial Nerve Identifies Sexually Dimorphic Expression of Genes Involved in Pain, Inflammation, and Neuro-Immunity
Q47795361	Transcriptome Association Identifies Regulators of Wheat Spike Architecture
Q64074650	Transcriptome Changes in Relation to Manic Episode
Q89966089	Transcriptome Changes of Mycobacterium marinum in the Process of Resuscitation From Hypoxia-Induced Dormancy
Q42773793	Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis.
Q58563219	Transcriptome Dynamics During Turbot Spermatogenesis Predicting the Potential Key Genes Regulating Male Germ Cell Proliferation and Maturation
Q36188897	Transcriptome Dynamics and Potential Roles of Sox6 in the Postnatal Heart.
Q55405501	Transcriptome Network Analysis Reveals Aging-Related Mitochondrial and Proteasomal Dysfunction and Immune Activation in Human Thyroid.
Q35705783	Transcriptome Profiling of Peripheral Blood in 22q11.2 Deletion Syndrome Reveals Functional Pathways Related to Psychosis and Autism Spectrum Disorder
Q64986962	Transcriptome Responses to Dexamethasone Depending on Dose and Glucocorticoid Receptor Sensitivity in the Liver.
Q99725286	Transcriptome Sequencing Revealed an Inhibitory Mechanism of Aspergillus flavus Asexual Development and Aflatoxin Metabolism by Soy-Fermenting Non-Aflatoxigenic Aspergillus
Q90382342	Transcriptome Sequencing and Metabolome Analysis Reveal Genes Involved in Pigmentation of Green-Colored Cotton Fibers
Q33754066	Transcriptome analyses of chronic traumatic encephalopathy show alterations in protein phosphatase expression associated with tauopathy
Q33559942	Transcriptome analyses of differential gene expression in the bursa of Fabricius between Silky Fowl and White Leghorn
Q93186632	Transcriptome analyses of tumor-adjacent somatic tissues reveal genes co-expressed with transposable elements
Q36238517	Transcriptome analyses reveal molecular mechanisms underlying functional recovery after spinal cord injury
Q89856314	Transcriptome analyses reveal molecular mechanisms underlying phenotypic differences among transcriptional subtypes of glioblastoma
Q94595181	Transcriptome analysis and metabolic profiling reveal the key role of carotenoids in the petal coloration of Liriodendron tulipifera
Q89208171	Transcriptome analysis for identifying possible gene regulations during maize root emergence and formation at the initial growth stage
Q90727685	Transcriptome analysis identified a novel 3-LncRNA regulatory network of transthyretin attenuating glucose induced hRECs dysfunction in diabetic retinopathy
Q92126440	Transcriptome analysis identifies genes and co-expression networks underlying heat tolerance in pigs
Q37374036	Transcriptome analysis of HIV-infected peripheral blood monocytes: gene transcripts and networks associated with neurocognitive functioning
Q38616509	Transcriptome analysis of an apple (Malus × domestica) yellow fruit somatic mutation identifies a gene network module highly associated with anthocyanin and epigenetic regulation
Q33671452	Transcriptome analysis of bagging-treated red Chinese sand pear peels reveals light-responsive pathway functions in anthocyanin accumulation
Q48552084	Transcriptome analysis of bovine oocytes from distinct follicle sizes: Insights from correlation network analysis.
Q98161964	Transcriptome analysis of contrasting resistance to herbivory by Empoasca fabae in two shrub willow species and their hybrid progeny
Q92782995	Transcriptome analysis of fibroblasts from schizophrenia patients reveals differential expression of schizophrenia-related genes
Q41490792	Transcriptome analysis of genes involved in secondary cell wall biosynthesis in developing internodes of Miscanthus lutarioriparius
Q39705740	Transcriptome analysis of human cumulus cells reveals hypoxia as the main determinant of follicular senescence
Q64087045	Transcriptome analysis of normal-appearing white matter reveals cortisol- and disease-associated gene expression profiles in multiple sclerosis
Q58610422	Transcriptome analysis of peripheral blood from patients with rheumatoid arthritis: a systematic review
Q99571294	Transcriptome analysis of peripheral whole blood identifies crucial lncRNAs implicated in childhood asthma
Q33756712	Transcriptome analysis of psoriasis in a large case-control sample: RNA-seq provides insights into disease mechanisms
Q47804852	Transcriptome analysis of reproductive-stage Arabidopsis plants exposed gamma-ray irradiation at various doses
Q91773412	Transcriptome analysis of virulence-differentiated Fusarium oxysporum f. sp. cucumerinum isolates during cucumber colonisation reveals pathogenicity profiles
Q37296211	Transcriptome analysis reveals a comprehensive insect resistance response mechanism in cotton to infestation by the phloem feeding insect Bemisia tabaci (whitefly).
Q42777957	Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells.
Q34731122	Transcriptome analysis reveals dysregulation of innate immune response genes and neuronal activity-dependent genes in autism
Q64103330	Transcriptome analysis reveals the impact of arbuscular mycorrhizal symbiosis on Sesbania cannabina expose to high salinity
Q57279778	Transcriptome analysis reveals the molecular mechanisms of the defense response to gray leaf spot disease in maize
Q55322156	Transcriptome and Co-Expression Network Analyses Identify Key Genes Regulating Nitrogen Use Efficiency in Brassica juncea L.
Q99404929	Transcriptome and Flavonoids Metabolomic Analysis Identifies Regulatory Networks and Hub Genes in Black and White Fruits of Lycium ruthenicum Murray
Q89634274	Transcriptome and Phytochemical Analysis Reveals the Alteration of Plant Hormones, Characteristic Metabolites, and Related Gene Expression in Tea (Camellia sinensis L.) Leaves During Withering
Q64068230	Transcriptome and Proteome-Based Network Analysis Reveals a Model of Gene Activation in Wheat Resistance to Stripe Rust
Q110951155	Transcriptome and carotenoid profiling of different varieties of Coffea arabica provides insights into fruit color formation
Q90462279	Transcriptome and epigenome landscape of human cortical development modeled in organoids
Q102141548	Transcriptome and genome sequencing elucidates the molecular basis for the high yield and good quality of the hybrid rice variety Chuanyou6203
Q57839351	Transcriptome and metabolome reveal distinct carbon allocation patterns during internode sugar accumulation in different sorghum genotypes
Q91949379	Transcriptome and metabolome reveal redirection of flavonoids in a white testa peanut mutant
Q90076407	Transcriptome co-expression network analysis identifies key genes and regulators of ripening kiwifruit ester biosynthesis
Q34550198	Transcriptome comparison and gene coexpression network analysis provide a systems view of citrus response to 'Candidatus Liberibacter asiaticus' infection.
Q89945300	Transcriptome differences in adipose stromal cells derived from pre- and postmenopausal women
Q55261552	Transcriptome display during tilapia sex determination and differentiation as revealed by RNA-Seq analysis.
Q90076689	Transcriptome divergence during leaf development in two contrasting switchgrass (Panicum virgatum L.) cultivars
Q58694806	Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes
Q50128372	Transcriptome evolution from breast epithelial cells to basal-like tumors.
Q34041693	Transcriptome instability as a molecular pan-cancer characteristic of carcinomas
Q34027064	Transcriptome instability in colorectal cancer identified by exon microarray analyses: Associations with splicing factor expression levels and patient survival
Q64235758	Transcriptome network analysis identifies protective role of the LXR/SREBP-1c axis in murine pulmonary fibrosis
Q92955585	Transcriptome networks identify mechanisms of viral and nonviral asthma exacerbations in children
Q91869050	Transcriptome of Gonads From High Temperature Induced Sex Reversal During Sex Determination and Differentiation in Chinese Tongue Sole, Cynoglossus semilaevis
Q89723330	Transcriptome of iPSC-derived neuronal cells reveals a module of co-expressed genes consistently associated with autism spectrum disorder
Q35674997	Transcriptome organization for chronic alcohol abuse in human brain.
Q38660576	Transcriptome predictors of coral survival and growth in a highly variable environment.
Q89720341	Transcriptome profiles of Quercus rubra responding to increased O3 stress
Q91643448	Transcriptome profiles reveal that gibberellin-related genes regulate weeping traits in crape myrtle
Q102053967	Transcriptome profiling and weighted gene co-expression network analysis of early floral development in Aquilegia coerulea
Q46932523	Transcriptome profiling of equine vitamin E deficient neuroaxonal dystrophy identifies upregulation of liver X receptor target genes
Q42778117	Transcriptome profiling of individual rhesus macaque oocytes and preimplantation embryos.
Q28649666	Transcriptome profiling of the dynamic life cycle of the scypohozoan jellyfish Aurelia aurita
Q36099406	Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake
Q92508417	Transcriptome profiling reveals association of peripheral adipose tissue pathology with type-2 diabetes in Asian Indians
Q39385007	Transcriptome responses to combinations of stresses in Arabidopsis
Q40493822	Transcriptome sequencing identified hub genes for hepatocellular carcinoma by weighted-gene co-expression analysis.
Q38437361	Transcriptome sequencing implicates dorsal striatum-specific gene network, immune response and energy metabolism pathways in bipolar disorder
Q91924535	Transcriptome sequencing of Saccharina japonica sporophytes during whole developmental periods reveals regulatory networks underlying alginate and mannitol biosynthesis
Q30363952	Transcriptome sequencing of the choroid plexus in schizophrenia
Q38454156	Transcriptome sequencing reveals population differentiation in gene expression linked to functional traits and environmental gradients in the South African shrub Protea repens
Q91933944	Transcriptome signatures from discordant sibling pairs reveal changes in peripheral blood immune cell composition in Autism Spectrum Disorder
Q47762172	Transcriptome-Wide Identification and Characterization of Potato Circular RNAs in Response to Pectobacterium carotovorum Subspecies brasiliense Infection
Q34659689	Transcriptome-based network analysis reveals a spectrum model of human macrophage activation.
Q38619068	Transcriptome-based network analysis reveals renal cell type-specific dysregulation of hypoxia-associated transcripts
Q31098935	Transcriptomes of Eight Arabidopsis thaliana Accessions Reveal Core Conserved, Genotype- and Organ-Specific Responses to Flooding Stress.
Q90180959	Transcriptomic Analyses for Identification and Prioritization of Genes Associated With Alzheimer's Disease in Humans
Q41526088	Transcriptomic Analysis Reveals Candidate Genes for Female Sterility in Pomegranate Flowers
Q64987989	Transcriptomic Analysis Reveals a Comprehensive Calcium- and Phytohormone-Dominated Signaling Response in Leymus chinensis Self-Incompatibility.
Q91843726	Transcriptomic Analysis of Glioma Based on IDH Status Identifies ACAA2 as a Prognostic Factor in Lower Grade Glioma
Q91151795	Transcriptomic Analysis of mRNA-lncRNA-miRNA Interactions in Hepatocellular Carcinoma
Q52408123	Transcriptomic Insights into Phenological Development and Cold Tolerance of Wheat Grown in the Field.
Q37581141	Transcriptomic Modification in the Cerebral Cortex following Noninvasive Brain Stimulation: RNA-Sequencing Approach
Q46393662	Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells
Q64103244	Transcriptomic Sequencing and Co-Expression Network Analysis on Key Genes and Pathways Regulating Nitrogen Use Efficiency in
Q38402904	Transcriptomic alterations in the brain of painted turtles (Chrysemys picta) developmentally exposed to bisphenol A or ethinyl estradiol.
Q58751820	Transcriptomic analyses of cacao cell suspensions in light and dark provide target genes for controlled flavonoid production
Q29614877	Transcriptomic analysis of autistic brain reveals convergent molecular pathology
Q64233816	Transcriptomic analysis of cultivated cotton Gossypium hirsutum provides insights into host responses upon whitefly-mediated transmission of cotton leaf curl disease
Q64060884	Transcriptomic analysis of different tissue layers in antler growth Center in Sika Deer (Cervus nippon)
Q38440259	Transcriptomic analysis of instinctive and learned reward-related behaviors in honey bees.
Q101464951	Transcriptomic analysis of tea plant (Camellia sinensis) revealed the co-expression network of 4111 paralogous genes and biosynthesis of quality-related key metabolites under multiple stresses
Q41829536	Transcriptomic analysis reveals abnormal muscle repair and remodeling in survivors of critical illness with sustained weakness
Q58775105	Transcriptomic analysis reveals key lncRNAs associated with ribosomal biogenesis and epidermis differentiation in head and neck squamous cell carcinoma
Q90781955	Transcriptomic analysis reveals potential genes involved in tanshinone biosynthesis in Salvia miltiorrhiza
Q47243806	Transcriptomic and Metabolomic Reprogramming from Roots to Haustoria in the Parasitic Plant, Thesium chinense.
Q48366345	Transcriptomic and metabolic analyses provide new insights into chilling injury in peach fruit.
Q92932227	Transcriptomic and open chromatin atlas of high-resolution anatomical regions in the rhesus macaque brain
Q34799988	Transcriptomic and phylogenetic analysis of a bacterial cell cycle reveals strong associations between gene co-expression and evolution
Q58800744	Transcriptomic comparison reveals genetic variation potentially underlying seed developmental evolution of soybeans
Q98463614	Transcriptomic determinants of the response of ST-111 Pseudomonas aeruginosa AG1 to ciprofloxacin identified by a top-down systems biology approach
Q36927630	Transcriptomic differences between euryhaline and stenohaline malaria vector sibling species in response to salinity stress
Q36284318	Transcriptomic dynamics of breast cancer progression in the MMTV-PyMT mouse model.
Q35623787	Transcriptomic landscape of lncRNAs in inflammatory bowel disease
Q31100144	Transcriptomic network analyses of leaf dehydration responses identify highly connected ABA and ethylene signaling hubs in three grapevine species differing in drought tolerance
Q104517962	Transcriptomic organization of the human brain in post-traumatic stress disorder
Q47874649	Transcriptomic plasticity in brown adipose tissue contributes to an enhanced capacity for nonshivering thermogenesis in deer mice.
Q92616613	Transcriptomic profile of early zebrafish PGCs by single cell sequencing
Q35563260	Transcriptomic profiles of aging in purified human immune cells
Q58098827	Transcriptomic profiling for prolonged drought in Dendrobium catenatum
Q41634828	Transcriptomic profiling in muscle and adipose tissue identifies genes related to growth and lipid deposition.
Q91949245	Transcriptomic profiling of Solanum peruvianum LA3858 revealed a Mi-3-mediated hypersensitive response to Meloidogyne incognita
Q47115091	Transcriptomic profiling of the human brain reveals that altered synaptic gene expression is associated with chronological aging
Q57052742	Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density
Q36308889	Transcriptomic responses to environmental temperature by turtles with temperature-dependent and genotypic sex determination assessed by RNAseq inform the genetic architecture of embryonic gonadal development
Q90091679	Transcriptomic signatures of brain regional vulnerability to Parkinson's disease
Q47563152	Transcriptomic signatures of cellular and humoral immune responses in older adults after seasonal influenza vaccination identified by data-driven clustering
Q37254516	Transcriptomic signatures of neuronal differentiation and their association with risk genes for autism spectrum and related neuropsychiatric disorders.
Q64916342	Transcriptomics Analysis Reveals New Insights into the Roles of Notch1 Signaling on Macrophage Polarization.
Q64266559	Transcriptomics Identifies Modules of Differentially Expressed Genes and Novel Cyclotides in
Q37547512	Transcriptomics analysis of hulless barley during grain development with a focus on starch biosynthesis
Q92827096	Transcriptomics analysis revealing candidate genes and networks for sex differentiation of yesso scallop (Patinopecten yessoensis)
Q56669948	Transcriptomics analysis revealing candidate networks and genes for the body size sexual dimorphism of Chinese tongue sole (Cynoglossus semilaevis)
Q90723401	Transcriptomics of Tasmanian Devil (Sarcophilus Harrisii) Ear Tissue Reveals Homogeneous Gene Expression Patterns across a Heterogeneous Landscape
Q38267169	Transcriptomics of developing embryos and organs: A raising tool for evo-devo
Q44933147	Transcriptomics reveals multiple resistance mechanisms against cotton leaf curl disease in a naturally immune cotton species, Gossypium arboreum
Q34288037	Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain
Q39033082	Transformation and model choice for RNA-seq co-expression analysis
Q41625328	Transformation of the Radial Glia Scaffold Demarcates Two Stages of Human Cerebral Cortex Development
Q47312708	Translational systems pharmacology studies in pregnant women
Q34686706	Transplantation-associated long-term immunosuppression promotes oral colonization by potentially opportunistic pathogens without impacting other members of the salivary bacteriome.
Q33912787	Transposable elements (TEs) contribute to stress-related long intergenic noncoding RNAs in plants.
Q38597826	Triple DMARD treatment in early rheumatoid arthritis modulates synovial T cell activation and plasmablast/plasma cell differentiation pathways.
Q100391110	Tumor microenvironment characterization in head and neck squamous carcinoma reveals distinct genomic alterations and clinical outcomes
Q99636345	Tumor resident stromal cells promote breast cancer invasion through regulation of the basal phenotype
Q92221276	Twin-peak temporal regulation during human neocortical development
Q36837543	Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System
Q33600105	Two gene co-expression modules differentiate psychotics and controls
Q55340850	Two-dimensional analysis provides molecular insight into flower scent of Lilium 'Siberia'.
Q35533224	Two-stage genome-wide search for epistasis with implementation to Recombinant Inbred Lines (RIL) populations
Q100525847	Type 2 and interferon inflammation regulate SARS-CoV-2 entry factor expression in the airway epithelium
Q95627784	Type 2 and interferon inflammation strongly regulate SARS-CoV-2 related gene expression in the airway epithelium
Q90737141	UV-B Radiation Largely Promoted the Transformation of Primary Metabolites to Phenols in Astragalus mongholicus Seedlings
Q89339014	Unbiased transcriptomic analyses reveal distinct effects of immune deficiency in CNS function with and without injury
Q93019818	Uncovering a mitochondrial unfolded protein response in corals and its role in adapting to a changing world
Q35746862	Uncovering co-expression gene network modules regulating fruit acidity in diverse apples
Q38619881	Uncovering robust patterns of microRNA co-expression across cancers using Bayesian Relevance Networks
Q37211775	Uncovering the liver's role in immunity through RNA co-expression networks
Q36257430	Underexpression of Specific Interferon Genes Is Associated with Poor Prognosis of Melanoma
Q64087040	Understanding Molecular Mechanisms of the Brain Through Transcriptomics
Q39066301	Understanding development and stem cells using single cell-based analyses of gene expression.
Q41073345	Understanding developmental and adaptive cues in pine through metabolite profiling and co-expression network analysis
Q40094137	Understanding patient outcomes after acute respiratory distress syndrome: identifying subtypes of physical, cognitive and mental health outcomes
Q90103116	Understanding the Molecular Mechanisms of Asthma through Transcriptomics
Q53110064	Understanding the progression of atherosclerosis through gene profiling and co-expression network analysis in Apob(tm2Sgy)Ldlr(tm1Her) double knockout mice.
Q38805134	Undiscovered Physiology of Transcript and Protein Networks
Q36313466	Unique Physiological and Transcriptional Shifts under Combinations of Salinity, Drought, and Heat.
Q91496533	Unraveling cis and trans regulatory evolution during cotton domestication
Q55224632	Unravelling miRNA regulation in yield of rice (Oryza sativa) based on differential network model.
Q64059490	Unravelling paralogous gene expression dynamics during three-spined stickleback embryogenesis
Q30823455	Unsupervised data-driven stratification of mentalizing heterogeneity in autism
Q52311029	Unsupervised, statistically-based systems biology approach for unraveling the genetics of complex traits: A demonstration with ethanol metabolism.
Q60953184	Up-regulation of Polo-like Kinase 1 in nasopharyngeal carcinoma tissues: a comprehensive investigation based on RNA-sequencing, gene chips, and in-house tissue arrays
Q58597684	Up-regulation of the kinase gene by progesterone activates the AP-1-NDRG1 axis in both PR-positive and -negative breast cancer cells
Q99583737	Upregulation of STAT1-CCL5 axis is a biomarker of colon cancer and promotes the proliferation of colon cancer cells
Q35630898	Urothelial cancer gene regulatory networks inferred from large-scale RNAseq, Bead and Oligo gene expression data
Q89999348	Use of preclinical models to identify markers of type 2 diabetes susceptibility and novel regulators of insulin secretion - A step towards precision medicine
Q36903750	Use of transcriptomics and co-expression networks to analyze the interconnections between nitrogen assimilation and photorespiratory metabolism
Q39117064	Using Baseline Transcriptional Connectomes in Rat to Identify Genetic Pathways Associated with Predisposition to Complex Traits
Q37731238	Using Network Extracted Ontologies to Identify Novel Genes with Roles in Appressorium Development in the Rice Blast Fungus Magnaporthe oryzae
Q35958472	Using bioinformatics and systems genetics to dissect HDL-cholesterol genetics in an MRL/MpJ x SM/J intercross
Q31149231	Using gene expression data to identify causal pathways between genotype and phenotype in a complex disease: application to Genetic Analysis Workshop 19.
Q28655514	Using genome-wide expression profiling to define gene networks relevant to the study of complex traits: from RNA integrity to network topology
Q47111161	Using molecular functional networks to manifest connections between obesity and obesity-related diseases
Q30571648	Using networks to understand medical data: the case of Class III malocclusions
Q38433884	Using scale and feather traits for module construction provides a functional approach to chicken epidermal development
Q31147883	Utility and Limitations of Using Gene Expression Data to Identify Functional Associations
Q34255855	Utilizing RNA-Seq data for de novo coexpression network inference
Q35585897	Vaginal microbiota of adolescent girls prior to the onset of menarche resemble those of reproductive-age women
Q91185200	Variation among intact tissue samples reveals the core transcriptional features of human CNS cell classes
Q47872282	Variation in Activity State, Axonal Projection, and Position Define the Transcriptional Identity of Individual Neocortical Projection Neurons.
Q38865433	Vascular Cell Induction Culture System Using Arabidopsis Leaves (VISUAL) Reveals the Sequential Differentiation of Sieve Element-Like Cells
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Q89881979	X-Module: A novel fusion measure to associate co-expressed gene modules from condition-specific expression profiles
Q30947772	Zodiac: A Comprehensive Depiction of Genetic Interactions in Cancer by Integrating TCGA Data
Q91871332	Zscan4c activates endogenous retrovirus MERVL and cleavage embryo genes
Q35202669	bacterial infection drives the expression dynamics of microRNAs and their isomiRs
Q42211335	brain-coX: investigating and visualising gene co-expression in seven human brain transcriptomic datasets
Q35885874	cMonkey2: Automated, systematic, integrated detection of co-regulated gene modules for any organism
Q34589924	canEvolve: a web portal for integrative oncogenomics
Q64979205	ceRNA network analysis reveals prognostic markers for glioblastoma.
Q35505157	chromoWIZ: a web tool to query and visualize chromosome-anchored genes from cereal and model genomes.
Q47294799	circlncRNAnet: An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs
Q30611147	curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome
Q89464919	decorate: Differential Epigenetic Correlation Test
Q91806068	eXplainable Artificial Intelligence (XAI) for the identification of biologically relevant gene expression patterns in longitudinal human studies, insights from obesity research
Q59340541	funcExplorer: a tool for fast data-driven functional characterisation of high-throughput expression data
Q64072377	genetics and applications after de novo genome sequencing: achievements and prospects
Q35171744	iBIG: an integrative network tool for supporting human disease mechanism studies
Q60043869	iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data
Q47160511	iSyTE 2.0: a database for expression-based gene discovery in the eye.
Q64054392	identified by comprehensive bioinformatic analysis as a hub candidate biological target in human epithelial ovarian cancer
Q39396240	inFRank: a ranking-based identification of influential genes in biological networks
Q38871451	lncRNA co-expression network model for the prognostic analysis of acute myeloid leukemia
Q60300980	lncRNA profile study reveals the mRNAs and lncRNAs associated with docetaxel resistance in breast cancer cells
Q41664875	lncRNA requirements for mouse acute myeloid leukemia and normal differentiation.
Q92889833	lncRNA-CCDC26, as a novel biomarker, predicts prognosis in acute myeloid leukemia
Q100454916	lncRNAKB, a knowledgebase of tissue-specific functional annotation and trait association of long noncoding RNA
Q64069753	m6Acomet: large-scale functional prediction of individual mA RNA methylation sites from an RNA co-methylation network
Q38438717	mRNA Transcriptomics of Galectins Unveils Heterogeneous Organization in Mouse and Human Brain
Q38598443	mRNA-miRNA bipartite network reconstruction to predict prognostic module biomarkers in colorectal cancer stage differentiation
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Q89766436	manta: a Clustering Algorithm for Weighted Ecological Networks
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Q42695443	netReg: Network-regularized linear models for biological association studies.
Q36095039	petal: Co-expression network modelling in R.
Q64061742	scNPF: an integrative framework assisted by network propagation and network fusion for preprocessing of single-cell RNA-seq data
Q38406916	stringgaussnet: from differentially expressed genes to semantic and Gaussian networks generation
Q57790155	wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool
Q31149074	xMSannotator: An R Package for Network-Based Annotation of High-Resolution Metabolomics Data.

scholarly article	Q13442814
review article	Q7318358

P8978	DBLP publication ID	journals/bmcbi/LangfelderH08
P6179	Dimensions Publication ID	1020312314
P356	DOI	10.1186/1471-2105-9-559
P3181	OpenCitations bibliographic resource ID	90628
P932	PMC publication ID	2631488
P698	PubMed publication ID	19114008
P5875	ResearchGate publication ID	23711218

P50	author	Steve Horvath	Q30595792
P2093	author name string	Peter Langfelder
P2860	cites work	Geometric interpretation of gene coexpression network analysis	Q21145373
		Gene ontology: tool for the unification of biology	Q23781406
		Cytoscape: a software environment for integrated models of biomolecular interaction networks	Q24515682
		Automated modelling of signal transduction networks	Q24799569
		A prediction-based resampling method for estimating the number of clusters in a dataset	Q24802783
		WebGestalt: an integrated system for exploring gene sets in various biological contexts	Q24813284
		DAVID: Database for Annotation, Visualization, and Integrated Discovery	Q27499374
		Collective dynamics of 'small-world' networks	Q27861064
		Missing value estimation methods for DNA microarrays	Q28200763
		Network-based analysis of affected biological processes in type 2 diabetes models	Q28469240
		A gene-coexpression network for global discovery of conserved genetic modules	Q29614451
		Genetics of gene expression and its effect on disease	Q29614591
		A general framework for weighted gene co-expression network analysis	Q29617580
		Hierarchical organization of modularity in metabolic networks	Q29618451
		Transitive functional annotation by shortest-path analysis of gene expression data	Q30716814
		From correlation to causation networks: a simple approximate learning algorithm and its application to high-dimensional plant gene expression data	Q31121019
		Gene connectivity, function, and sequence conservation: predictions from modular yeast co-expression networks	Q33235411
		Modelling the network of cell cycle transcription factors in the yeast Saccharomyces cerevisiae	Q33254241
		Integrating genetic and network analysis to characterize genes related to mouse weight	Q33255339
		Gene network interconnectedness and the generalized topological overlap measure	Q33270231
		GOSim--an R-package for computation of information theoretic GO similarities between terms and gene products	Q33285423
		Understanding network concepts in modules	Q33286658
		Eigengene networks for studying the relationships between co-expression modules	Q33306760
		Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants	Q33318135
		Using genetic markers to orient the edges in quantitative trait networks: the NEO software	Q33328317
		Integrated weighted gene co-expression network analysis with an application to chronic fatigue syndrome	Q33382893
		A systems level analysis of transcriptional changes in Alzheimer's disease and normal aging	Q33985604
		Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R.	Q34714933
		Analysis of oncogenic signaling networks in glioblastoma identifies ASPM as a molecular target	Q35127284
		Conservation and evolution of gene coexpression networks in human and chimpanzee brains	Q35215128
		Network structures and algorithms in Bioconductor	Q35857292
		Weighted gene coexpression network analysis strategies applied to mouse weight	Q36021366
		A gene expression network model of type 2 diabetes links cell cycle regulation in islets with diabetes susceptibility	Q36586611
		Inferring causal phenotype networks from segregating populations	Q36724284
		Elucidating the role of gonadal hormones in sexually dimorphic gene coexpression networks	Q37125958
		VisANT: an integrative framework for networks in systems biology	Q37345430
		Functional organization of the transcriptome in human brain	Q37373520
		A pattern recognition approach to infer time-lagged genetic interactions	Q38292743
		Network neighborhood analysis with the multi-node topological overlap measure	Q46178132
		An empirical Bayes approach to inferring large-scale gene association networks.	Q48519116
P275	copyright license	Creative Commons Attribution 2.0 Generic	Q19125117
P6216	copyright status	copyrighted	Q50423863
P4510	describes a project that uses	Cytoscape	Q3699942
		R package	Q73539779
		WGCNA	Q102537983
P433	issue	1
P407	language of work or name	English	Q1860
P921	main subject	R package	Q73539779
		WGCNA	Q102537983
P6104	maintained by WikiProject	WikiProject Software	Q15659621
P304	page(s)	559
P577	publication date	2008-01-01
P1433	published in	BMC Bioinformatics	Q4835939
P1476	title	WGCNA: an R package for weighted correlation network analysis
P478	volume	9

WGCNA: an R package for weighted correlation network analysis

scientific article

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