| Q54496676 | "Reductional anaphase" in replication-defective cells is caused by ubiquitin-conjugating enzyme Cdc34-mediated deregulation of the spindle |
| Q28751755 | "Topological significance" analysis of gene expression and proteomic profiles from prostate cancer cells reveals key mechanisms of androgen response |
| Q37772117 | 100% protein sequence coverage: a modern form of surrealism in proteomics |
| Q35024551 | 193‐nm photodissociation of singly and multiply charged peptide anions for acidic proteome characterization |
| Q30578327 | 1D and 2D annotation enrichment: a statistical method integrating quantitative proteomics with complementary high-throughput data |
| Q37481011 | 2-DE with IPGs. |
| Q37447178 | A HUPO test sample study reveals common problems in mass spectrometry-based proteomics |
| Q34555110 | A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis |
| Q36144204 | A computational tool to detect and avoid redundancy in selected reaction monitoring |
| Q42924044 | A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed. |
| Q38253819 | A dynamic model of proteome changes reveals new roles for transcript alteration in yeast |
| Q33509356 | A dynamic range compression and three-dimensional peptide fractionation analysis platform expands proteome coverage and the diagnostic potential of whole saliva |
| Q33958687 | A genetic engineering solution to the "arginine conversion problem" in stable isotope labeling by amino acids in cell culture (SILAC). |
| Q33929715 | A guide through the computational analysis of isotope-labeled mass spectrometry-based quantitative proteomics data: an application study |
| Q34333458 | A high performance profile-biomarker diagnosis for mass spectral profiles |
| Q31015627 | A honey bee (Apis mellifera L.) PeptideAtlas crossing castes and tissues |
| Q30484362 | A manual collection of Syt, Esyt, Rph3a, Rph3al, Doc2, and Dblc2 genes from 46 metazoan genomes--an open access resource for neuroscience and evolutionary biology |
| Q30663351 | A modular framework for gene set analysis integrating multilevel omics data |
| Q43028053 | A multilevel investigation to discover why Kandelia candel thrives in high salinity |
| Q38510457 | A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics |
| Q24609943 | A protease for 'middle-down' proteomics |
| Q30974252 | A proteomic view of an important human pathogen--towards the quantification of the entire Staphylococcus aureus proteome |
| Q36828359 | A proteomics view of the molecular mechanisms and biomarkers of glaucomatous neurodegeneration |
| Q42378825 | A quantitative comparison of cytosolic delivery via different protein uptake systems. |
| Q34454936 | A robust method for quantitative high-throughput analysis of proteomes by 18O labeling. |
| Q47781854 | A stress test for mass spectrometry-based proteomics |
| Q34207316 | A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics |
| Q38880835 | A tool to evaluate correspondence between extraction ion chromatographic peaks and peptide-spectrum matches in shotgun proteomics experiments |
| Q51525919 | A whole-molecule immunocapture LC-MS approach for the in vivo quantitation of biotherapeutics |
| Q42544184 | Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast). |
| Q35176370 | Absolute quantification of microbial proteomes at different states by directed mass spectrometry |
| Q39766915 | Absolute quantification of the glycolytic pathway in yeast: deployment of a complete QconCAT approach |
| Q35148591 | Abundance-based classifier for the prediction of mass spectrometric peptide detectability upon enrichment (PPA). |
| Q35581569 | Accounting for experimental noise reveals that mRNA levels, amplified by post-transcriptional processes, largely determine steady-state protein levels in yeast |
| Q34157715 | Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ. |
| Q41864344 | Accurate proteome-wide protein quantification from high-resolution 15N mass spectra |
| Q34551868 | Accurate quantification of more than 4000 mouse tissue proteins reveals minimal proteome changes during aging |
| Q34422372 | Activated-ion electron transfer dissociation improves the ability of electron transfer dissociation to identify peptides in a complex mixture |
| Q55339992 | Adaptive genome duplication affects patterns of molecular evolution in Saccharomyces cerevisiae. |
| Q52354794 | Affinity enrichment for mass spectrometry: improving the yield of low abundance biomarkers |
| Q88182869 | Altered access to beneficial mutations slows adaptation and biases fixed mutations in diploids |
| Q33859813 | An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes |
| Q45909854 | An exclusion list based label‐free proteome quantification approach using an LTQ Orbitrap |
| Q42148649 | An integrated approach for genome annotation of the eukaryotic thermophile Chaetomium thermophilum |
| Q33525505 | An integrative -omics approach to identify functional sub-networks in human colorectal cancer |
| Q38028384 | Analysing signalling networks by mass spectrometry |
| Q36307676 | Analysis of Ubiquitinated Proteome by Quantitative Mass Spectrometry |
| Q34701211 | Analysis of human protein replacement stable cell lines established using snoMEN-PR vector |
| Q38235078 | Analysis of protein carbonylation--pitfalls and promise in commonly used methods. |
| Q54277046 | Analysis of protein mixtures from whole-cell extracts by single-run nanoLC-MS/MS using ultralong gradients |
| Q38623199 | Analysis of sphingolipids, sterols and phospholipids in human pathogenic Cryptococcus strains |
| Q33567813 | Analysis of tandem mass spectra by FTMS for improved large-scale proteomics with superior protein quantification |
| Q35846571 | Analysis of the acidic proteome with negative electron-transfer dissociation mass spectrometry. |
| Q28396816 | Analysis of tissue specimens by matrix-assisted laser desorption/ionization imaging mass spectrometry in biological and clinical research. |
| Q21092412 | Ancient evolutionary trade-offs between yeast ploidy states |
| Q42369487 | Aneuploidy confers quantitative proteome changes and phenotypic variation in budding yeast |
| Q49922966 | Application of targeted mass spectrometry in bottom-up proteomics for systems biology research. |
| Q37581410 | Applying mass spectrometry-based proteomics to genetics, genomics and network biology |
| Q37778557 | Arabidopsis thaliana as a model organism for plant proteome research |
| Q47410742 | Asymmetric cell division requires specific mechanisms for adjusting global transcription |
| Q37939277 | Barrett's esophagus: genetic and cell changes |
| Q33420619 | Bioinformatics analysis of mass spectrometry-based proteomics data sets |
| Q27930766 | Biotin starvation causes mitochondrial protein hyperacetylation and partial rescue by the SIRT3-like deacetylase Hst4p |
| Q42862273 | Bottom-Up Mass Spectrometry-Based Proteomics as an Investigative Analytical Tool for Discovery and Quantification of Proteins in Biological Samples |
| Q37956662 | Brain asymmetry: both sides of the story |
| Q38997863 | Bridging the physical scales in evolutionary biology: from protein sequence space to fitness of organisms and populations |
| Q43620204 | Bringing proteomics into the clinic: The need for the field to finally take itself seriously |
| Q24339224 | Broad activation of the ubiquitin–proteasome system by Parkin is critical for mitophagy |
| Q26753827 | Bulked sample analysis in genetics, genomics and crop improvement |
| Q43528627 | CAPER: a Chromosome-Assembled human Proteome browsER |
| Q42627010 | Cancer proteomics--an evolving battlefield. Conference on Cancer Proteomics 2009: Mechanistic Insights, Technological Advances & Molecular Medicine |
| Q41652908 | Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation |
| Q27011224 | Cell wall-related bionumbers and bioestimates of Saccharomyces cerevisiae and Candida albicans |
| Q55347431 | Cell-free synthesis of stable isotope-labeled internal standards for targeted quantitative proteomics. |
| Q42924875 | Characterization and prediction of haploinsufficiency using systems-level gene properties in yeast |
| Q50850214 | Characterization of a high field Orbitrap mass spectrometer for proteome analysis |
| Q42192576 | Characterizing Peptide Neutral Losses Induced by Negative Electron-Transfer Dissociation (NETD) |
| Q45270098 | Charge state coalescence during electrospray ionization improves peptide identification by tandem mass spectrometry. |
| Q37585697 | Chemical tools for temporally and spatially resolved mass spectrometry-based proteomics |
| Q36891262 | Click Chemistry Facilitates Formation of Reporter Ions and Simplified Synthesis of Amine-Reactive Multiplexed Isobaric Tags for Protein Quantification |
| Q35106806 | Clinical microfluidics for neutrophil genomics and proteomics. |
| Q33932964 | Codon-by-codon modulation of translational speed and accuracy via mRNA folding. |
| Q33600684 | Combining isoelectric point-based fractionation, liquid chromatography and mass spectrometry to improve peptide detection and protein identification |
| Q37417695 | Community Effects on Elderly Health: Evidence from CHARLS National Baseline |
| Q90269835 | Comparative Proteomic Analysis on Fruit Ripening Processes in Two Varieties of Tropical Mango (Mangifera indica) |
| Q34157419 | Comparative analysis of different label-free mass spectrometry based protein abundance estimates and their correlation with RNA-Seq gene expression data |
| Q51772108 | Comparative analysis to guide quality improvements in proteomics |
| Q39406080 | Comparative proteomic analysis of eleven common cell lines reveals ubiquitous but varying expression of most proteins |
| Q42027571 | Comparative proteomics of two life cycle stages of stable isotope-labeled Trypanosoma brucei reveals novel components of the parasite's host adaptation machinery |
| Q37680364 | Comparative ribosome profiling reveals extensive translational complexity in different Trypanosoma brucei life cycle stages. |
| Q42186889 | Comparative secretome analysis of Trichoderma asperellum S4F8 and Trichoderma reesei Rut C30 during solid-state fermentation on sugarcane bagasse |
| Q38506625 | Comparative transcriptomic and proteomic profiling of industrial wine yeast strains |
| Q37626883 | Comparing cellular proteomes by mass spectrometry |
| Q57752855 | Comparison of Nuclear Matrix and Mitotic Chromosome Scaffold Proteins in S2 Cells-Transmission of Hallmarks of Nuclear Organization Through Mitosis |
| Q33801614 | Comparison of membrane proteins of Mycobacterium tuberculosis H37Rv and H37Ra strains. |
| Q42152357 | Complement receptor Mac-1 is an adaptor for NB1 (CD177)-mediated PR3-ANCA neutrophil activation |
| Q40832451 | Comprehensive Temporal Protein Dynamics during the Diauxic Shift in Saccharomyces cerevisiae |
| Q33883058 | Comprehensive profiling of cartilage extracellular matrix formation and maturation using sequential extraction and label-free quantitative proteomics |
| Q42074039 | Comprehensive proteomic analysis of Schizosaccharomyces pombe by two-dimensional HPLC-tandem mass spectrometry |
| Q42703268 | Comprehensive quantitative analysis of central carbon and amino‐acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics |
| Q38997181 | Computational Methods in Mass Spectrometry-Based Proteomics |
| Q35586804 | Computational mass spectrometry-based proteomics |
| Q42776919 | Conserved peptide fragmentation as a benchmarking tool for mass spectrometers and a discriminating feature for targeted proteomics |
| Q41334829 | Control of translation efficiency in yeast by codon-anticodon interactions |
| Q34018045 | Convergence of ubiquitylation and phosphorylation signaling in rapamycin-treated yeast cells |
| Q42029542 | Correct interpretation of comprehensive phosphorylation dynamics requires normalization by protein expression changes |
| Q35009100 | Correlation of mRNA and protein in complex biological samples. |
| Q55038642 | Cost-effective generation of precise label-free quantitative proteomes in high-throughput by microLC and data-independent acquisition |
| Q24297811 | Crosstalk between C/EBPbeta phosphorylation, arginine methylation, and SWI/SNF/Mediator implies an indexing transcription factor code |
| Q28741669 | Cryptic Fitness Advantage: Diploids Invade Haploid Populations Despite Lacking Any Apparent Advantage as Measured by Standard Fitness Assays |
| Q38080975 | Deciphering post-translational modification codes. |
| Q37749492 | Decoding signalling networks by mass spectrometry-based proteomics |
| Q39540825 | Deep and highly sensitive proteome coverage by LC-MS/MS without prefractionation. |
| Q42917663 | Deep coverage of the Escherichia coli proteome enables the assessment of false discovery rates in simple proteogenomic experiments |
| Q39446248 | Deep proteome and transcriptome mapping of a human cancer cell line |
| Q37844151 | Defining pluripotent stem cells through quantitative proteomic analysis. |
| Q34476804 | Defining the transcriptome and proteome in three functionally different human cell lines |
| Q50222902 | Desiccation enhances phosphorylation of PSII and affects the distribution of protein complexes in the thylakoid membrane. |
| Q34946937 | Design of a peptide-based vector, PepFect6, for efficient delivery of siRNA in cell culture and systemically in vivo |
| Q42515233 | Determinants and Regulation of Protein Turnover in Yeast |
| Q33471957 | Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function. |
| Q37426025 | Developing top down proteomics to maximize proteome and sequence coverage from cells and tissues. |
| Q38428550 | Development and performance evaluation of an ultralow flow nanoliquid chromatography-tandem mass spectrometry set-up |
| Q34242995 | Development of a pharmaceutical hepatotoxicity biomarker panel using a discovery to targeted proteomics approach. |
| Q93115203 | Dietary restriction induces posttranscriptional regulation of longevity genes |
| Q34193649 | Differential proteomics analysis reveals a role for E2F2 in the regulation of the Ahr pathway in T lymphocytes. |
| Q36778277 | Direct and Absolute Quantification of over 1800 Yeast Proteins via Selected Reaction Monitoring. |
| Q31035788 | Direct iterative protein profiling (DIPP) - an innovative method for large-scale protein detection applied to budding yeast mitosis. |
| Q37272461 | Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome |
| Q38080324 | Directly from the source: endogenous preparations of molecular machines |
| Q33508740 | Discovery and validation of colonic tumor-associated proteins via metabolic labeling and stable isotopic dilution. |
| Q36810839 | Distinct temporal requirements for autophagy and the proteasome in yeast meiosis |
| Q36800967 | Divergent Protein Motifs Direct Elongation Factor P-Mediated Translational Regulation in Salmonella enterica and Escherichia coli |
| Q28598377 | Dual regulation of cytoplasmic and mitochondrial acetyl-CoA utilization for improved isoprene production in Saccharomyces cerevisiae. |
| Q92131201 | Dual role of a GTPase conformational switch for membrane fusion by mitofusin ubiquitylation |
| Q33605287 | Dual-pressure linear ion trap mass spectrometer improving the analysis of complex protein mixtures |
| Q48573977 | Durable pluripotency and haploidy in epiblast stem cells derived from haploid embryonic stem cells in vitro |
| Q38171432 | Dynamic protein interaction network construction and applications |
| Q34320724 | Dynamics of the skeletal muscle secretome during myoblast differentiation |
| Q28474439 | Ecological adaptation of diverse honey bee (Apis mellifera) populations |
| Q36539208 | Effects of polyploidy and reproductive mode on life history trait expression |
| Q34062501 | Efficient construction of homozygous diploid strains identifies genes required for the hyper-filamentous phenotype in Saccharomyces cerevisiae |
| Q27934599 | Eisosome proteins assemble into a membrane scaffold |
| Q34023025 | Elevated proteasome capacity extends replicative lifespan in Saccharomyces cerevisiae |
| Q33510684 | Empirical Bayes analysis of quantitative proteomics experiments |
| Q57174838 | Engineering TATA-binding protein Spt15 to improve ethanol tolerance and production in |
| Q57149467 | Enhanced N-glycosylation site exploitation of sialoglycopeptides by peptide IPG-IEF assisted TiO2 chromatography |
| Q36003437 | Enhanced snoMEN Vectors Facilitate Establishment of GFP-HIF-1α Protein Replacement Human Cell Lines |
| Q92513694 | Enhancement of LacI binding in vivo |
| Q35565706 | Estimating a structured covariance matrix from multi-lab measurements in high-throughput biology |
| Q30855358 | Estimating the total number of phosphoproteins and phosphorylation sites in eukaryotic proteomes |
| Q41774909 | Estimation of Absolute Protein Quantities of Unlabeled Samples by Selected Reaction Monitoring Mass Spectrometry |
| Q41769887 | Evaluation and properties of the budding yeast phosphoproteome |
| Q33638709 | Evaluation of different two-dimensional chromatographic techniques for proteomic analysis of mouse cardiac tissue |
| Q38717814 | Expanding Proteome Coverage with CHarge Ordered Parallel Ion aNalysis (CHOPIN) Combined with Broad Specificity Proteolysis. |
| Q37623639 | Expanding proteome coverage with orthogonal-specificity α-lytic proteases |
| Q38877937 | Exploiting the multiplexing capabilities of tandem mass tags for high-throughput estimation of cellular protein abundances by mass spectrometry. |
| Q40398967 | Exposure Memory and Lung Regeneration |
| Q35751621 | Extending the dynamic range of label-free mass spectrometric quantification of affinity purifications |
| Q34609308 | Extensive mass spectrometry-based analysis of the fission yeast proteome: the Schizosaccharomyces pombe PeptideAtlas |
| Q43567328 | Fast photochemical oxidation of proteins coupled to multidimensional protein identification technology (MudPIT): expanding footprinting strategies to complex systems |
| Q41230332 | Feasibility of protein turnover studies in prototroph Saccharomyces cerevisiae strains |
| Q35788248 | From pathways to networks: connecting dots by establishing protein-protein interaction networks in signaling pathways using affinity purification and mass spectrometry. |
| Q57666050 | From the Human Genome to the Human Proteome |
| Q33674206 | Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics |
| Q37770069 | Functional analysis of proteins and protein species using shotgun proteomics and linear mathematics |
| Q38142052 | Functional genomics in the study of yeast cell polarity: moving in the right direction. |
| Q33908099 | GProX, a user-friendly platform for bioinformatics analysis and visualization of quantitative proteomics data |
| Q35488768 | Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging |
| Q46088388 | GeLCMS for In-Depth Protein Characterization and Advanced Analysis of Proteomes |
| Q83430951 | General Trends in the Utilization of Structural Factors Contributing to Biological Complexity |
| Q37800025 | Generating and navigating proteome maps using mass spectrometry. |
| Q35991493 | Genetic variation in insulin-induced kinase signaling |
| Q36378016 | Genome and low-iron response of an oceanic diatom adapted to chronic iron limitation |
| Q33578807 | Genome expression balance in a triploid trihybrid vertebrate |
| Q34016175 | Genome-scale analysis of translation elongation with a ribosome flow model |
| Q24651977 | Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling |
| Q39216215 | Genome-wide mapping of cellular traits using yeast |
| Q34916184 | Genome-wide single-cell-level screen for protein abundance and localization changes in response to DNA damage in S. cerevisiae. |
| Q24247657 | Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation |
| Q38078643 | Genomic and post-genomic leads toward regulation of spermatogenesis |
| Q34378398 | Genomics meets proteomics: identifying the culprits in disease |
| Q28744096 | GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle |
| Q33797222 | Global Analysis of Cellular Protein Flux Quantifies the Selectivity of Basal Autophagy |
| Q37895213 | Global absolute quantification of a proteome: Challenges in the deployment of a QconCAT strategy. |
| Q24646313 | Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry |
| Q37996667 | Global relative and absolute quantitation in microbial proteomics |
| Q33874396 | Global signatures of protein and mRNA expression levels |
| Q47153267 | Glycoproteins Enrichment and LC-MS/MS Glycoproteomics in Central Nervous System Applications. |
| Q33668518 | GroEL dependency affects codon usage--support for a critical role of misfolding in gene evolution |
| Q33772117 | Haploids adapt faster than diploids across a range of environments |
| Q33994860 | Heritability and genetic basis of protein level variation in an outbred population |
| Q42428373 | Heterozygote Advantage Is a Common Outcome of Adaptation in Saccharomyces cerevisiae. |
| Q44916176 | High pH reversed-phase chromatography as a superior fractionation scheme compared to off-gel isoelectric focusing for complex proteome analysis |
| Q38122110 | High throughput strategies for probing the different organizational levels of protein interaction networks |
| Q37949352 | High-resolution and tandem mass spectrometry--the indispensable tools of the XXI century |
| Q37160946 | High-throughput database search and large-scale negative polarity liquid chromatography-tandem mass spectrometry with ultraviolet photodissociation for complex proteomic samples |
| Q33517451 | High-throughput generation of selected reaction-monitoring assays for proteins and proteomes |
| Q30406087 | High-throughput technologies for gene expression analyses: what we have learned for noise-induced cochlear degeneration? |
| Q37062642 | Higher rate of tissue regeneration in polyploid asexual versus diploid sexual freshwater snails |
| Q34994380 | Higher-energy collision-activated dissociation without a dedicated collision cell |
| Q35628447 | Highly Predictive Reprogramming of tRNA Modifications Is Linked to Selective Expression of Codon-Biased Genes |
| Q41328146 | How Many proteins are Missed in Quantitative proteomics Based on Ms/Ms sequencing Methods? |
| Q37975999 | How advancement in biological network analysis methods empowers proteomics |
| Q42131449 | Hyperplexing: a method for higher-order multiplexed quantitative proteomics provides a map of the dynamic response to rapamycin in yeast |
| Q92212142 | Hypothesis: protein and RNA attributes are continuously optimized over time |
| Q38055425 | IEF‐based multidimensional applications in proteomics: Toward higher resolution |
| Q35144136 | Identification of increased amounts of eppin protein complex components in sperm cells of diabetic and obese individuals by difference gel electrophoresis |
| Q34314582 | Identification of long-lived proteins retained in cells undergoing repeated asymmetric divisions |
| Q38633663 | Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation. |
| Q37724834 | Improved isobaric tandem mass tag quantification by ion mobility mass spectrometry |
| Q35132996 | Improving Proteome Coverage on a LTQ-Orbitrap Using Design of Experiments |
| Q41658385 | Improving the accuracy of recombinant protein production through integration of bioinformatics, statistical and mass spectrometry methodologies. |
| Q30659424 | In silico proteome-wide amino aCid and elemental composition (PACE) analysis of expression proteomics data provides a fingerprint of dominant metabolic processes. |
| Q90018905 | Incorporation of a unified protein abundance dataset into the Saccharomyces genome database |
| Q43092798 | Increased proteome coverage by combining PAGE and peptide isoelectric focusing: comparative study of gel-based separation approaches. |
| Q36990748 | Increasing proteome coverage with offline RP HPLC coupled to online RP nanoLC-MS. |
| Q37023610 | Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses |
| Q36386951 | Inference and Validation of Protein Identifications |
| Q28488605 | Inferring metabolic states in uncharacterized environments using gene-expression measurements |
| Q42170460 | Infrared Multiphoton Dissociation for Quantitative Shotgun Proteomics |
| Q36846022 | Insights into the regulation of protein abundance from proteomic and transcriptomic analyses |
| Q36001400 | Instant spectral assignment for advanced decision tree-driven mass spectrometry |
| Q37956670 | Intact proteome fractionation strategies compatible with mass spectrometry. |
| Q33792044 | Integrated RNA- and protein profiling of fermentation and respiration in diploid budding yeast provides insight into nutrient control of cell growth and development |
| Q35695964 | Integrating Phosphoproteomics and Bioinformatics to Study Brassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis |
| Q24489928 | Integrative "omics"-approach discovers dynamic and regulatory features of bacterial stress responses |
| Q36832454 | Integrative Proteomic and Transcriptomic Analyses Reveal Multiple Post-transcriptional Regulatory Mechanisms of Mouse Spermatogenesis |
| Q33647384 | Integrative analysis of large scale expression profiles reveals core transcriptional response and coordination between multiple cellular processes in a cyanobacterium |
| Q34297076 | Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae |
| Q33697735 | Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance. |
| Q41953621 | Investigating protein isoforms via proteomics: a feasibility study |
| Q37799103 | Ion channels and their molecular environments – Glimpses and insights from functional proteomics |
| Q50223930 | Ion traps in modern mass spectrometry |
| Q36081220 | Is more better? Polyploidy and parasite resistance. |
| Q35863308 | Joining forces: integrating proteomics and cross-linking with the mass spectrometry of intact complexes |
| Q38081011 | Karyotypic changes as drivers and catalyzers of cellular evolvability: A perspective from non-pathogenic yeasts |
| Q34767114 | LINKIN, a new transmembrane protein necessary for cell adhesion |
| Q30855943 | Leveraging the complementary nature of RNA-Seq and shotgun proteomics data |
| Q93054802 | Linear Ubiquitin Chains: Cellular Functions and Strategies for Detection and Quantification |
| Q38492157 | LoQAtE--Localization and Quantitation ATlas of the yeast proteomE. A new tool for multiparametric dissection of single-protein behavior in response to biological perturbations in yeast |
| Q27860589 | Lysine acetylation targets protein complexes and co-regulates major cellular functions |
| Q30406018 | MALDI imaging mass spectrometry: spatial molecular analysis to enable a new age of discovery |
| Q28078375 | Mass Spectrometry-Based Approaches to Understand the Molecular Basis of Memory |
| Q37802219 | Mass spectrometry at the interface of proteomics and genomics |
| Q54676816 | Mass spectrometry in high-throughput proteomics: ready for the big time |
| Q38867552 | Mass spectrometry methods for predicting antibiotic resistance |
| Q34083139 | Mass spectrometry–based proteomics in cell biology |
| Q38954701 | Mass-spectrometric exploration of proteome structure and function |
| Q29547200 | MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification |
| Q64238765 | MaxQuant.Live Enables Global Targeting of More Than 25,000 Peptides |
| Q35966334 | MaxReport: An Enhanced Proteomic Result Reporting Tool for MaxQuant |
| Q34625287 | Measurements of the impact of 3' end sequences on gene expression reveal wide range and sequence dependent effects |
| Q26864428 | Mechanisms and regulation of mitotic recombination in Saccharomyces cerevisiae |
| Q38057716 | Membrane proteomics by high performance liquid chromatography-tandem mass spectrometry: Analytical approaches and challenges |
| Q38688403 | Metabolic Trade-offs in Yeast are Caused by F1F0-ATP synthase |
| Q37017244 | Metabolite concentrations, fluxes and free energies imply efficient enzyme usage |
| Q28085717 | Methodologies and perspectives of proteomics applied to filamentous fungi: from sample preparation to secretome analysis |
| Q38654102 | Microbial Proteome Profiling and Systems Biology: Applications to Mycobacterium tuberculosis |
| Q39028018 | Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells |
| Q34490441 | Misfolded proteins impose a dosage-dependent fitness cost and trigger a cytosolic unfolded protein response in yeast |
| Q90971081 | Mitochondrial proteins: from biogenesis to functional networks |
| Q47259445 | Mitogen-activated protein kinases, Fus3 and Kss1, regulate chronological lifespan in yeast |
| Q28483742 | Modeling phenotypic metabolic adaptations of Mycobacterium tuberculosis H37Rv under hypoxia |
| Q42924270 | Modified MuDPIT Separation Identified 4488 Proteins in a System-wide Analysis of Quiescence in Yeast |
| Q28607220 | Molecular portraits: the evolution of the concept of transcriptome-based cancer signatures |
| Q31139124 | Multi-omic data integration enables discovery of hidden biological regularities |
| Q35043629 | Multiple MAPK cascades regulate the transcription of IME1, the master transcriptional activator of meiosis in Saccharomyces cerevisiae |
| Q36154610 | Nanoflow low pressure high peak capacity single dimension LC-MS/MS platform for high-throughput, in-depth analysis of mammalian proteomes. |
| Q33452815 | Nanospray FAIMS fractionation provides significant increases in proteome coverage of unfractionated complex protein digests |
| Q37001998 | Native SILAC: Metabolic Labeling of Proteins in Prototroph Microorganisms Based on Lysine Synthesis Regulation |
| Q36432202 | Network-based inference from complex proteomic mixtures using SNIPE. |
| Q36346742 | Neural precursor cells induce cell death of high-grade astrocytomas through stimulation of TRPV1 |
| Q37582769 | Neuroproteomics: understanding the molecular organization and complexity of the brain |
| Q34315255 | Next-generation proteomics: towards an integrative view of proteome dynamics. |
| Q42115686 | Nic1 inactivation enables stable isotope labeling with 13C615N4-arginine in Schizosaccharomyces pombe |
| Q34476789 | Nonsense-mediated decay targets have multiple sequence-related features that can inhibit translation |
| Q34059311 | Novel Proteomic Tools Reveal Essential Roles of SRP and Importance of Proper Membrane Protein Biogenesis |
| Q34660202 | Ocular proteomics with emphasis on two-dimensional gel electrophoresis and mass spectrometry. |
| Q36209099 | On marathons and Sprints: an integrated quantitative proteomics and transcriptomics analysis of differences between slow and fast muscle fibers |
| Q41063145 | On protein abundance distributions in complex mixtures |
| Q30000693 | OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants |
| Q50991243 | One-hour proteome analysis in yeast. |
| Q34380702 | Online Nanoflow RP−RP-MS Reveals Dynamics of Multicomponent Ku Complex in Response to DNA Damage |
| Q35385135 | Online nanoflow reversed phase-strong anion exchange-reversed phase liquid chromatography-tandem mass spectrometry platform for efficient and in-depth proteome sequence analysis of complex organisms. |
| Q41669281 | Optimization of parameters for coverage of low molecular weight proteins |
| Q34125509 | Options and considerations when selecting a quantitative proteomics strategy |
| Q37975831 | Organized living: formation mechanisms and functions of plasma membrane domains in yeast |
| Q38065684 | PROTEINCHALLENGE: Crowd sourcing in proteomics analysis and software development |
| Q37215852 | Pain’s peptide signature |
| Q27010002 | Parasites, proteomes and systems: has Descartes’ clock run out of time? |
| Q64116354 | Pareto Optimality Explanation of the Glycolytic Alternatives in Nature |
| Q36144185 | PaxDb, a database of protein abundance averages across all three domains of life |
| Q41863038 | Peptide labeling with isobaric tags yields higher identification rates using iTRAQ 4-plex compared to TMT 6-plex and iTRAQ 8-plex on LTQ Orbitrap |
| Q84561052 | PeptideClassifier for protein inference and targeted quantitative proteomics |
| Q34034421 | Peptidomic discovery of short open reading frame-encoded peptides in human cells. |
| Q49795048 | Performance of Arma chinensis reared on an artificial diet formulated using transcriptomic methods |
| Q34150453 | Phenomics: the next challenge |
| Q35850344 | Phosphoproteome dynamics of Saccharomyces cerevisiae under heat shock and cold stress |
| Q42736625 | Phosphoproteomics taken to heart |
| Q40116832 | Phosphoproteomics-Based Systems Analysis of Signal Transduction Networks |
| Q33750163 | Phosphoproteomics-based modeling defines the regulatory mechanism underlying aberrant EGFR signaling |
| Q38650449 | Ploidy Variation in Fungi: Polyploidy, Aneuploidy, and Genome Evolution |
| Q34760440 | Ploidy dictates repair pathway choice under DNA replication stress |
| Q53791421 | Ploidy tug-of-war: Evolutionary and genetic environments influence the rate of ploidy drive in a human fungal pathogen |
| Q91621977 | Pooled clone collections by multiplexed CRISPR-Cas12a-assisted gene tagging in yeast |
| Q33664151 | Post-translational modifications of FDA-approved plasma biomarkers in glioblastoma samples. |
| Q36650187 | Probing the complementarity of FAIMS and strong cation exchange chromatography in shotgun proteomics |
| Q21195732 | Profile of native cellulosomal proteins of Clostridium cellulovorans adapted to various carbon sources |
| Q37279509 | Promoters maintain their relative activity levels under different growth conditions |
| Q53100608 | Protease bias in absolute protein quantitation |
| Q34600986 | Protein analysis by shotgun/bottom-up proteomics |
| Q28252235 | Protein identification false discovery rates for very large proteomics data sets generated by tandem mass spectrometry |
| Q39195638 | Protein kinase Ymr291w/Tda1 is essential for glucose signaling in saccharomyces cerevisiae on the level of hexokinase isoenzyme ScHxk2 phosphorylation*. |
| Q33633576 | Protein rates of evolution are predicted by double-strand break events, independent of crossing-over rates |
| Q39094533 | Protein synthesis rate is the predominant regulator of protein expression during differentiation |
| Q91775816 | Protein synthesis rates and ribosome occupancies reveal determinants of translation elongation rates |
| Q37791993 | Protein-protein interaction networks and subnetworks in the biology of disease |
| Q43552698 | Protein–Ligand Interactions: Fundamentals |
| Q34445858 | Proteome remodelling during development from blood to insect-form Trypanosoma brucei quantified by SILAC and mass spectrometry |
| Q36386946 | Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae |
| Q47138265 | Proteome-wide modulation of degradation dynamics in response to growth arrest. |
| Q57181405 | ProteomeGenerator: A framework for comprehensive proteomics based on de novo transcriptome assembly and high-accuracy peptide mass spectral matching |
| Q37636447 | Proteomic Workflows for Biomarker Identification Using Mass Spectrometry - Technical and Statistical Considerations during Initial Discovery |
| Q33918941 | Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns |
| Q33537421 | Proteomic analysis of prolactinoma cells by immuno-laser capture microdissection combined with online two-dimensional nano-scale liquid chromatography/mass spectrometry |
| Q38480936 | Proteomic and functional consequences of hexokinase deficiency in glucose-repressible Kluyveromyces lactis |
| Q35139099 | Proteomic challenges: sample preparation techniques for microgram-quantity protein analysis from biological samples |
| Q33686899 | Proteomic changes resulting from gene copy number variations in cancer cells |
| Q33599524 | Proteomic differences between male and female anterior cruciate ligament and patellar tendon |
| Q64111309 | Proteomic profiling and integrated analysis with transcriptomic data bring new insights in the stress responses of after an arrest during high-temperature ethanol fermentation |
| Q28258081 | Proteomic profiling of follicular and papillary thyroid tumors |
| Q57251411 | Proteomics |
| Q31018671 | Proteomics Reveals a Role for the RNA Helicase crhR in the Modulation of Multiple Metabolic Pathways during Cold Acclimation of Synechocystis sp. PCC6803 |
| Q35570890 | Proteomics and pluripotency |
| Q37809828 | Proteomics and the dynamic plasma membrane: Quo Vadis? |
| Q38567766 | Proteomics for biomedicine: a half-completed journey |
| Q37978004 | Proteomics in evolutionary ecology: linking the genotype with the phenotype |
| Q55056925 | Proteomics meets the scientific method. |
| Q37897213 | Proteomics of eukaryotic microorganisms: The medically and biotechnologically important fungal genus Aspergillus |
| Q42410654 | Proteomics on an Orbitrap benchtop mass spectrometer using all-ion fragmentation |
| Q84561067 | Proteomics retrenches |
| Q37812484 | Proteomics technologies for the global identification and quantification of proteins |
| Q37771859 | Proteomics: a pragmatic perspective |
| Q43116298 | QARIP: a web server for quantitative proteomic analysis of regulated intramembrane proteolysis |
| Q57887155 | Quality control in LC-MS/MS |
| Q27932769 | Quality control of inner nuclear membrane proteins by the Asi complex |
| Q38449518 | Quantification of tunicamycin-induced protein expression and N-glycosylation changes in yeast. |
| Q35005556 | Quantifying condition-dependent intracellular protein levels enables high-precision fitness estimates |
| Q83752088 | Quantitation of Polypeptides (Glucagon And Salmon Calcitonin) in Plasma Samples By ‘High Resolution’ on A Triple Quadrupole Mass Spectrometer |
| Q38936276 | Quantitative Analysis of Cancer Metabolism: From pSIRM to MFA. |
| Q41618258 | Quantitative Proteome and Transcriptome Analysis of the Archaeon Thermoplasma acidophilum Cultured under Aerobic and Anaerobic Conditions |
| Q36144149 | Quantitative Proteomics Targeting Classes of Motif-containing Peptides Using Immunoaffinity-based Mass Spectrometry |
| Q42955546 | Quantitative analysis of chaperone network throughput in budding yeast. |
| Q33842680 | Quantitative analysis of intact apolipoproteins in human HDL by top-down differential mass spectrometry |
| Q41851003 | Quantitative assessment of in-solution digestion efficiency identifies optimal protocols for unbiased protein analysis |
| Q48011965 | Quantitative iTRAQ LC–MS/MS proteomics reveals the cellular response to heterologous protein overexpression and the regulation of HAC1 in Pichia pastoris |
| Q34279410 | Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues |
| Q38060665 | Quantitative mass spectrometry-based proteomics in angiogenesis. |
| Q36213742 | Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS. |
| Q38980335 | Quantitative phosphoproteomics reveals novel phosphorylation events in insulin signaling regulated by protein phosphatase 1 regulatory subunit 12A. |
| Q35583330 | Quantitative phosphoproteomics reveals pathways for coordination of cell growth and division by the conserved fission yeast kinase pom1 |
| Q34178389 | Quantitative proteomic analyses of influenza virus-infected cultured human lung cells |
| Q39451819 | Quantitative proteomic analysis of cellular protein modulation upon inhibition of the NEDD8-activating enzyme by MLN4924. |
| Q33511709 | Quantitative proteomic analysis of single pancreatic islets |
| Q36889276 | Quantitative proteomic analysis reveals concurrent RNA-protein interactions and identifies new RNA-binding proteins in Saccharomyces cerevisiae |
| Q42367376 | Quantitative proteomics and network analysis of SSA1 and SSB1 deletion mutants reveals robustness of chaperone HSP70 network in Saccharomyces cerevisiae |
| Q33597953 | Quantitative proteomics by metabolic labeling of model organisms |
| Q37829701 | Quantitative proteomics for epigenetics. |
| Q34156082 | Quantitative proteomics in cardiovascular research: global and targeted strategies |
| Q50797907 | Quantitative proteomics of Trypanosoma cruzi during metacyclogenesis |
| Q31039257 | Quantitative proteomics of complex mixtures. |
| Q34715701 | Quantitative proteomics reveals the temperature-dependent proteins encoded by a series of cluster genes in thermoanaerobacter tengcongensis. |
| Q36401264 | Quantitative proteomics to decipher ubiquitin signaling |
| Q38533946 | Quantitative proteomics using SILAC: Principles, applications, and developments |
| Q40388527 | Quantitative proteomics using ultralow flow capillary electrophoresis-mass spectrometry |
| Q102369546 | Quantitative shotgun proteome analysis by direct infusion |
| Q33910769 | Quantitative shotgun proteomics using a uniform ¹⁵N-labeled standard to monitor proteome dynamics in time course experiments reveals new insights into the heat stress response of Chlamydomonas reinhardtii |
| Q33891413 | Quantitative, high-resolution proteomics for data-driven systems biology |
| Q52431915 | Recent Advances in Metabolic Engineering of Saccharomyces cerevisiae: New Tools and Their Applications |
| Q38114159 | Recent technological developments in proteomics shed new light on translational research on diabetic microangiopathy |
| Q36063634 | Redox-regulated dynamic interplay between Cox19 and the copper-binding protein Cox11 in the intermembrane space of mitochondria facilitates biogenesis of cytochrome c oxidase |
| Q42326263 | Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast. |
| Q36493250 | Regulation of yeast central metabolism by enzyme phosphorylation |
| Q35693161 | Relationship between differentially expressed mRNA and mRNA-protein correlations in a xenograft model system |
| Q27936377 | Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins |
| Q37381956 | Research resource: identification of novel growth hormone-regulated phosphorylation sites by quantitative phosphoproteomics |
| Q38011634 | Resolving protein interactions and complexes by affinity purification followed by label‐based quantitative mass spectrometry |
| Q43071903 | Role of the cell wall integrity and filamentous growth mitogen-activated protein kinase pathways in cell wall remodeling during filamentous growth |
| Q57802936 | SCoPE-MS: mass spectrometry of single mammalian cells quantifies proteome heterogeneity during cell differentiation |
| Q38287734 | SILAC for biomarker discovery |
| Q35912600 | SNAREs support atlastin-mediated homotypic ER fusion in Saccharomyces cerevisiae |
| Q35590241 | Sec17 can trigger fusion of trans-SNARE paired membranes without Sec18. |
| Q86745443 | Sensing Small Changes in Protein Abundance: Stimulation of Caco-2 Cells by Human Whey Proteins |
| Q51531876 | Sensitivity to phosphorus limitation increases with ploidy level in a New Zealand snail |
| Q37222898 | Sensory input attenuation allows predictive sexual response in yeast |
| Q34314443 | Sequential switching of binding partners on PCNA during in vitro Okazaki fragment maturation |
| Q24652437 | Shotgun proteomics in neuroscience |
| Q35865404 | Shotgun proteomics of bacterial pathogens: advances, challenges and clinical implications |
| Q51672117 | Shotgun proteomics: future perspective in bioanalysis |
| Q33813846 | Simulating and validating proteomics data and search results |
| Q42962767 | Single-cell analysis of ribonucleotide reductase transcriptional and translational response to DNA damage |
| Q24297572 | Site-specific identification of SUMO-2 targets in cells reveals an inverted SUMOylation motif and a hydrophobic cluster SUMOylation motif |
| Q39814223 | Six alternative proteases for mass spectrometry-based proteomics beyond trypsin. |
| Q35082152 | Speed controls in translating secretory proteins in eukaryotes--an evolutionary perspective |
| Q38025675 | Spermatogenesis in mammals: proteomic insights |
| Q92373728 | Ssd1 and the cell wall integrity pathway promote entry, maintenance, and recovery from quiescence in budding yeast |
| Q37040167 | Sterol homeostasis requires regulated degradation of squalene monooxygenase by the ubiquitin ligase Doa10/Teb4 |
| Q33600052 | Strategies for quantitation of phosphoproteomic data |
| Q34249663 | Surveys of non-ribosomal peptide and polyketide assembly lines in fungi and prospects for their analysis in vitro and in vivo |
| Q42175950 | Swi2/Snf2-related translocases prevent accumulation of toxic Rad51 complexes during mitotic growth. |
| Q39178155 | Synonymous Codons: Choose Wisely for Expression |
| Q42120933 | System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap |
| Q38810151 | Systematic Analysis of Yeast Proteome Reveals Peptide Detectability Factors for Mass Spectrometry |
| Q35701509 | Systematic comparison of ultraviolet photodissociation and electron transfer dissociation for peptide anion characterization |
| Q35602018 | Systematic dissection of the sequence determinants of gene 3' end mediated expression control |
| Q37630764 | Systems biology from a yeast omics perspective |
| Q40170200 | Systems-level response to point mutations in a core metabolic enzyme modulates genotype-phenotype relationship. |
| Q30500770 | Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis |
| Q37225838 | TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics |
| Q41544809 | Tandem analysis of transcriptome and proteome changes after a single dose of corticosteroid: a systems approach to liver function in pharmacogenomics. |
| Q34133645 | Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis |
| Q37945786 | Targeted protein-omic methods are bridging the gap between proteomic and hypothesis-driven protein analysis approaches |
| Q36291575 | Targeted proteome analysis of single-gene deletion strains of Saccharomyces cerevisiae lacking enzymes in the central carbon metabolism |
| Q34630866 | Targeted quantitation of proteins by mass spectrometry. |
| Q33856993 | Testicular postgenomics: targeting the regulation of spermatogenesis |
| Q38634750 | The Biosynthetic Basis of Cell Size Control. |
| Q24305557 | The CHK2-BRCA1 tumour suppressor pathway ensures chromosomal stability in human somatic cells |
| Q58616340 | The Challenges of Interpreting Phosphoproteomics Data: A Critical View Through the Bioinformatics Lens |
| Q86200825 | The Coming Age of Complete, Accurate, and Ubiquitous Proteomes |
| Q83840607 | The Human Proteome Project Takes Shape Down Under |
| Q36103872 | The Impact II, a Very High-Resolution Quadrupole Time-of-Flight Instrument (QTOF) for Deep Shotgun Proteomics. |
| Q46299508 | The Influence of Polyploidy on the Evolution of Yeast Grown in a Sub-Optimal Carbon Source. |
| Q31110953 | The Perseus computational platform for comprehensive analysis of (prote)omics data |
| Q38127419 | The Profile of Human Sperm Proteome; A Mini-review |
| Q38747147 | The Proteomics of Intrathecal Analgesic agents for Chronic Pain |
| Q57015911 | The beauty of being (label)-free: sample preparation methods for SWATH-MS and next-generation targeted proteomics |
| Q38017803 | The bioinformatics tool box for reproductive biology |
| Q50643794 | The capsaicin receptor TRPV1 as a novel modulator of neural precursor cell proliferation. |
| Q40429659 | The coordinated action of the MVB pathway and autophagy ensures cell survival during starvation |
| Q46672901 | The diversity of protein turnover and abundance under nitrogen-limited steady-state conditions in Saccharomyces cerevisiae |
| Q37862861 | The dynamic state of protein turnover: It's about time |
| Q38221025 | The emergence of proteome-wide technologies: systematic analysis of proteins comes of age. |
| Q35047318 | The emerging process of Top Down mass spectrometry for protein analysis: biomarkers, protein-therapeutics, and achieving high throughput |
| Q37393307 | The evolutionary consequences of erroneous protein synthesis. |
| Q63379824 | The genome-wide rate and spectrum of spontaneous mutations differ between haploid and diploid yeast |
| Q36072813 | The human proteome - a scientific opportunity for transforming diagnostics, therapeutics, and healthcare |
| Q64055457 | The lipid head group is the key element for substrate recognition by the P4 ATPase ALA2: a phosphatidylserine flippase |
| Q37428852 | The one hour yeast proteome |
| Q24604716 | The protein composition of mitotic chromosomes determined using multiclassifier combinatorial proteomics |
| Q34587779 | The proteome and phosphoproteome of Neurospora crassa in response to cellulose, sucrose and carbon starvation. |
| Q96577238 | The proteome landscape of the kingdoms of life |
| Q28485287 | The proteome response to amyloid protein expression in vivo |
| Q38255027 | The proteome under translational control |
| Q34230963 | The quantitative proteome of a human cell line. |
| Q36844633 | The ribosomal protein Asc1/RACK1 is required for efficient translation of short mRNAs |
| Q38222880 | The role of post-translational modifications in acute and chronic cardiovascular disease |
| Q28542471 | The specific cleavage of lactone linkage to open-loop in cyclic lipopeptide during negative ESI tandem mass spectrometry: the hydrogen bond interaction effect of 4-ethyl guaiacol |
| Q34994359 | The steady-state repertoire of human SCF ubiquitin ligase complexes does not require ongoing Nedd8 conjugation |
| Q53966001 | The substrate specificity of eukaryotic cytosolic chaperonin CCT. |
| Q36061524 | The tRNA methyltransferase Dnmt2 is required for accurate polypeptide synthesis during haematopoiesis |
| Q27939749 | The yeast Sks1p kinase signaling network regulates pseudohyphal growth and glucose response |
| Q43088569 | The yeast enzyme Eht1 is an octanoyl-CoA:ethanol acyltransferase that also functions as a thioesterase |
| Q91230819 | The yeast peroxisome: A dynamic storage depot and subcellular factory for squalene overproduction |
| Q34952213 | Thematic Review Series: Proteomics. An integrated omics analysis of eicosanoid biology |
| Q41661095 | Thirty Minutes of Hypobaric Hypoxia Provokes Alterations of Immune Response, Haemostasis, and Metabolism Proteins in Human Serum |
| Q38696976 | Tissue Specific Labeling in Proteomics |
| Q26824034 | Tissue proteomics in pancreatic cancer study: Discovery, emerging technologies, and challenges |
| Q38690340 | Trans-splicing enhances translational efficiency in C. elegans. |
| Q42775874 | Transcriptome structure variability in Saccharomyces cerevisiae strains determined with a newly developed assembly software |
| Q37080009 | Trauma-associated human neutrophil alterations revealed by comparative proteomics profiling |
| Q53384163 | Trypsin Immobilization on Hairy Polymer Chains Hybrid Magnetic Nanoparticles for Ultra Fast, Highly Efficient Proteome Digestion, Facile 18O Labeling and Absolute Protein Quantification |
| Q53177388 | Two-Dimensional Protein Separation by the HPLC System with a Monolithic Column |
| Q27939287 | Ubiquitin binding by a CUE domain regulates ubiquitin chain formation by ERAD E3 ligases |
| Q33616610 | Ultrafast ultraviolet photodissociation at 193 nm and its applicability to proteomic workflows. |
| Q36106899 | Ultrasensitive Negative Feedback Control: A Natural Approach for the Design of Synthetic Controllers |
| Q37229254 | Unbiased RNA-protein interaction screen by quantitative proteomics. |
| Q42924043 | Unbiased quantitation of Escherichia coli membrane proteome using phase transfer surfactants |
| Q85892159 | Universally increased mRNA stability downstream of the translation initiation site in eukaryotes and prokaryotes |
| Q39413596 | Urinary secretion and extracellular aggregation of mutant uromodulin isoforms. |
| Q26753163 | Urine Proteome Biomarkers in Kidney Diseases. I. Limits, Perspectives, and First Focus on Normal Urine |
| Q83366737 | Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics |
| Q28286406 | Using ProtMAX to create high-mass-accuracy precursor alignments from label-free quantitative mass spectrometry data generated in shotgun proteomics experiments |
| Q35536391 | Using SRM-MS to quantify nuclear protein abundance differences between adipose tissue depots of insulin-resistant mice. |
| Q38992135 | Using in vivo biotinylated ubiquitin to describe a mitotic exit ubiquitome from human cells. |
| Q47266322 | Validation of regulated protein phosphorylation events in yeast by quantitative mass spectrometry analysis of purified proteins |
| Q33707969 | Value of using multiple proteases for large-scale mass spectrometry-based proteomics |
| Q33767436 | Visual account of protein investment in cellular functions |
| Q33625441 | Visualisation tool for peptide fractionation data in proteomics: application to OFFGEL isoelectric focussing |
| Q39925520 | What does the future hold for Top Down mass spectrometry? |
| Q57979639 | Yeast Expression Proteomics by High-Resolution Mass Spectrometry |
| Q36604123 | Yeast Interspecies Comparative Proteomics Reveals Divergence in Expression Profiles and Provides Insights into Proteome Resource Allocation and Evolutionary Roles of Gene Duplication |
| Q37921678 | Yeast Systems Biology: The Challenge of Eukaryotic Complexity |
| Q34005153 | iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates |
| Q33802981 | pep2pro: a new tool for comprehensive proteome data analysis to reveal information about organ-specific proteomes in Arabidopsis thaliana |
| Q37049384 | tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding. |