| scholarly article | Q13442814 |
| P50 | author | Zhuo Du | Q57328049 |
| Qing Huan | Q57337627 | ||
| Wenfeng Qian | Q61157957 | ||
| P2093 | author name string | Xiaoqing Zhang | |
| Xuehua Ma | |||
| Yu-Fei Yang | |||
| Qiushi Sun | |||
| Shaohuan Wu | |||
| Taolan Zhao | |||
| P2860 | cites work | The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics | Q21092840 |
| An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs | Q22066003 | ||
| Operons in eukaryotes | Q22066087 | ||
| ViennaRNA Package 2.0 | Q24053233 | ||
| The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications | Q24498207 | ||
| Control of mammalian translation by mRNA structure near caps | Q24543940 | ||
| Sequence logos: a new way to display consensus sequences | Q24598387 | ||
| Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling | Q24651977 | ||
| Trans-splicing | Q26864730 | ||
| Conserved translatome remodeling in nematode species executing a shared developmental transition | Q27320558 | ||
| WebLogo: A Sequence Logo Generator | Q27860646 | ||
| Global analysis of protein expression in yeast | Q27860658 | ||
| Systematic functional analysis of the Caenorhabditis elegans genome using RNAi | Q27860839 | ||
| Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes | Q28140965 | ||
| Global quantification of mammalian gene expression control | Q28238103 | ||
| Translation matters: protein synthesis defects in inherited disease | Q28239576 | ||
| Operons as a common form of chromosomal organization in C. elegans | Q28241431 | ||
| Contribution of trans-splicing, 5' -leader length, cap-poly(A) synergism, and initiation factors to nematode translation in an Ascaris suum embryo cell-free system | Q28277994 | ||
| Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project | Q28301622 | ||
| Codon preferences in free-living microorganisms | Q28776145 | ||
| Mass-spectrometry-based draft of the human proteome | Q29617249 | ||
| From genomics to proteomics | Q30482453 | ||
| Accounting for biases in riboprofiling data indicates a major role for proline in stalling translation | Q30858065 | ||
| Balanced codon usage optimizes eukaryotic translational efficiency | Q31053878 | ||
| Differential translation tunes uneven production of operon-encoded proteins | Q33131287 | ||
| Comparison of C. elegans and C. briggsae genome sequences reveals extensive conservation of chromosome organization and synteny | Q33289780 | ||
| Coding-sequence determinants of gene expression in Escherichia coli | Q33428917 | ||
| Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources | Q33551343 | ||
| Unlocking the secrets of the genome | Q33745487 | ||
| The nematode eukaryotic translation initiation factor 4E/G complex works with a trans-spliced leader stem-loop to enable efficient translation of trimethylguanosine-capped RNAs | Q33769223 | ||
| Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis | Q33825350 | ||
| The selection-mutation-drift theory of synonymous codon usage | Q33958751 | ||
| An evolutionarily conserved mechanism for controlling the efficiency of protein translation | Q34022113 | ||
| The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria | Q34031282 | ||
| Operons in C. elegans: polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regions | Q34060309 | ||
| A global analysis of Caenorhabditis elegans operons | Q34134326 | ||
| Synonymous but not the same: the causes and consequences of codon bias | Q34151543 | ||
| Widespread organisation of C. elegans genes into operons: fact or function? | Q34155069 | ||
| Next-generation proteomics: towards an integrative view of proteome dynamics. | Q34315255 | ||
| WormBase 2014: new views of curated biology | Q34382790 | ||
| A global analysis of C. elegans trans-splicing | Q34548280 | ||
| Scalable and versatile genome editing using linear DNAs with microhomology to Cas9 Sites in Caenorhabditis elegans | Q34636173 | ||
| Trans-splicing and operons | Q34720214 | ||
| Deciphering the rules by which 5'-UTR sequences affect protein expression in yeast | Q34801786 | ||
| Functional analysis of a C. elegans trans-splice acceptor | Q34972441 | ||
| Translation initiation mediated by RNA looping | Q35037841 | ||
| Caenorhabditis elegans operons: form and function | Q35057534 | ||
| Wobble base-pairing slows in vivo translation elongation in metazoans | Q35567444 | ||
| A phylogeny of caenorhabditis reveals frequent loss of introns during nematode evolution | Q35573955 | ||
| Ribosomal tethering and clustering as mechanisms for translation initiation | Q35722081 | ||
| Genome-wide analysis of translational efficiency reveals distinct but overlapping functions of yeast DEAD-box RNA helicases Ded1 and eIF4A. | Q35876068 | ||
| SL trans-splicing: easy come or easy go? | Q36083566 | ||
| Evolutionary dynamics of nematode operons: easy come, slow go. | Q36484284 | ||
| DEPS-1 promotes P-granule assembly and RNA interference in C. elegans germ cells | Q36731916 | ||
| In vivo translation and stability of trans-spliced mRNAs in nematode embryos | Q36833932 | ||
| Rate-limiting steps in yeast protein translation | Q36959359 | ||
| The transcription start site landscape of C. elegans | Q37061196 | ||
| Translation elongation can control translation initiation on eukaryotic mRNAs | Q37708983 | ||
| Primate transcript and protein expression levels evolve under compensatory selection pressures | Q37715174 | ||
| Mass spectrometry-based proteomics and network biology | Q37996108 | ||
| Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present | Q38024637 | ||
| Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast | Q38512460 | ||
| Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation | Q41652908 | ||
| Metazoan operons accelerate recovery from growth-arrested states | Q41814570 | ||
| Ribosome profiling reveals post-transcriptional buffering of divergent gene expression in yeast. | Q41845109 | ||
| Massively parallel sequencing of the polyadenylated transcriptome of C. elegans | Q41941343 | ||
| Evolution at two levels of gene expression in yeast | Q41994568 | ||
| Analysis of the 5' untranslated region (5'UTR) of the alcohol oxidase 1 (AOX1) gene in recombinant protein expression in Pichia pastoris | Q42526446 | ||
| Most mRNAs in the nematode Ascaris lumbricoides are trans-spliced: a role for spliced leader addition in translational efficiency | Q43205788 | ||
| Mounting Caenorhabditis elegans embryos for live imaging of embryogenesis | Q46471237 | ||
| Divergence times in Caenorhabditis and Drosophila inferred from direct estimates of the neutral mutation rate | Q47716222 | ||
| A trans-spliced leader sequence on actin mRNA in C. elegans. | Q48343028 | ||
| A role for mRNA secondary structure in the control of translation initiation. | Q48405802 | ||
| P433 | issue | 9 | |
| P921 | main subject | Caenorhabditis elegans | Q91703 |
| P304 | page(s) | 1525-1535 | |
| P577 | publication date | 2017-07-06 | |
| P1433 | published in | Genome Research | Q5533485 |
| P1476 | title | Trans-splicing enhances translational efficiency in C. elegans | |
| P478 | volume | 27 |
| Q90029476 | Alternative ORFs and small ORFs: shedding light on the dark proteome |
| Q93115203 | Dietary restriction induces posttranscriptional regulation of longevity genes |
| Q61800772 | Heterodera glycines utilizes promiscuous spliced leaders and demonstrates a unique preference for a species-specific spliced leader over C. elegans SL1 |
| Q90237766 | SL-quant: a fast and flexible pipeline to quantify spliced leader trans-splicing events from RNA-seq data |
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