Conformational regulation of CRISPR-associated nucleases

scientific article

Conformational regulation of CRISPR-associated nucleases is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1016/J.MIB.2017.05.010
P932PMC publication ID5687066
P698PubMed publication ID28646675

P50authorBlake WiedenheftQ60169493
Samuel H SternbergQ91330226
Ryan JacksonQ43084035
P2093author name stringPaul Bg van Erp
P2860cites workDiscovery and Functional Characterization of Diverse Class 2 CRISPR-Cas SystemsQ21508512
Crystal Structure of the Minimal Cas9 from Campylobacter jejuni Reveals the Molecular Diversity in the CRISPR-Cas9 SystemsQ48258803
Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a.Q51041590
C2c1-sgRNA Complex Structure Reveals RNA-Guided DNA Cleavage MechanismQ51252507
Directional R-Loop Formation by the CRISPR-Cas Surveillance Complex Cascade Provides Efficient Off-Target Site RejectionQ52423455
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase IIIQ24628207
Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas systemQ24669821
A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial ImmunityQ24669850
Expanding the Biologist's Toolkit with CRISPR-Cas9Q26863745
Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coliQ27324547
An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3Q27667849
Mechanism of Foreign DNA Selection in a Bacterial Adaptive Immune SystemQ27678641
Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational ActivationQ27681624
Crystal Structure of Cas9 in Complex with Guide RNA and Target DNAQ27681727
Structural basis of PAM-dependent target DNA recognition by the Cas9 endonucleaseQ27684893
Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coliQ27694776
Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analogQ27700277
STRUCTURAL BIOLOGY. A Cas9-guide RNA complex preorganized for target DNA recognitionQ27701410
Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas SystemsQ27702487
Structures of a CRISPR-Cas9 R-loop complex primed for DNA cleavageQ27703932
Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coliQ27703998
The crystal structure of Cpf1 in complex with CRISPR RNAQ27704663
Small CRISPR RNAs guide antiviral defense in prokaryotesQ28290898
Nucleic acid detection with CRISPR-Cas13a/C2c2Q29385392
CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interferenceQ33607132
Self versus non-self discrimination during CRISPR RNA-directed immunity.Q33620668
An updated evolutionary classification of CRISPR-Cas systemsQ33660852
Cas1 and the Csy complex are opposing regulators of Cas2/3 nuclease activityQ33865561
Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes.Q33919648
DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.Q33931841
In vivo genome editing using Staphylococcus aureus Cas9Q34043628
Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cellsQ34093413
Structural basis for CRISPR RNA-guided DNA recognition by CascadeQ34175461
Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequenceQ34190309
Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity systemQ34287113
Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coliQ34300894
GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleasesQ34454104
The history and market impact of CRISPR RNA-guided nucleasesQ34473680
Foreign DNA capture during CRISPR-Cas adaptive immunityQ34499475
Biology and Applications of CRISPR Systems: Harnessing Nature's Toolbox for Genome EngineeringQ34509196
Structure and Engineering of Francisella novicida Cas9.Q34514052
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effectorQ34529451
Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systemsQ34536517
New CRISPR-Cas systems from uncultivated microbes.Q34547817
Type I-E CRISPR-cas systems discriminate target from non-target DNA through base pairing-independent PAM recognitionQ34988030
Degenerate target sites mediate rapid primed CRISPR adaptation.Q35142271
Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA targetQ35592632
A Conserved Structural Chassis for Mounting Versatile CRISPR RNA-Guided Immune ResponsesQ35735544
Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNAQ35999041
Structural biology. Structures of the CRISPR-Cmr complex reveal mode of RNA target positioningQ36092029
RNA and DNA Targeting by a Reconstituted Thermus thermophilus Type III-A CRISPR-Cas SystemQ36257710
Surveillance and Processing of Foreign DNA by the Escherichia coli CRISPR-Cas SystemQ36259528
Crystal Structure of Staphylococcus aureus Cas9Q36348284
CRISPR interference and priming varies with individual spacer sequencesQ36370849
Foreign DNA acquisition by the I-F CRISPR-Cas system requires all components of the interference machineryQ36370853
Bipartite recognition of target RNAs activates DNA cleavage by the Type III-B CRISPR-Cas systemQ36603869
RNA-activated DNA cleavage by the Type III-B CRISPR-Cas effector complexQ36603874
Conformational control of DNA target cleavage by CRISPR-Cas9.Q36879255
In Vitro Reconstitution of an Escherichia coli RNA-guided Immune System Reveals Unidirectional, ATP-dependent Degradation of DNA TargetQ37311829
Nucleases: diversity of structure, function and mechanism.Q37790458
CRISPR-Cas: New Tools for Genetic Manipulations from Bacterial Immunity SystemsQ38553835
Multiple nucleic acid cleavage modes in divergent type III CRISPR systemsQ38667891
Two Distant Catalytic Sites Are Responsible for C2c2 RNase ActivitiesQ38770695
Type III CRISPR-Cas Immunity: Major Differences Brushed AsideQ38988849
CRISPR-Based Technologies for the Manipulation of Eukaryotic GenomesQ39014648
PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas EndonucleaseQ40406605
A type III-B CRISPR-Cas effector complex mediating massive target DNA destructionQ40420402
Type V CRISPR-Cas Cpf1 endonuclease employs a unique mechanism for crRNA-mediated target DNA recognitionQ40604364
Cas3-Derived Target DNA Degradation Fragments Fuel Primed CRISPR AdaptationQ40613082
Spatiotemporal Control of Type III-A CRISPR-Cas Immunity: Coupling DNA Degradation with the Target RNA Recognition.Q40703180
Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex.Q41265458
Conformational Control of Cascade Interference and Priming Activities in CRISPR ImmunityQ41452106
Two distinct RNase activities of CRISPR-C2c2 enable guide-RNA processing and RNA detectionQ41558629
High-throughput analysis of type I-E CRISPR/Cas spacer acquisition inE. coliQ41995190
Priming in the Type I-F CRISPR-Cas system triggers strand-independent spacer acquisition, bi-directionally from the primed protospacer.Q42092486
CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3Q42128481
In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus.Q42262732
P921main subjectCRISPRQ412563
P304page(s)110-119
P577publication date2017-06-21
P13046publication type of scholarly workreview articleQ7318358
P1433published inCurrent Opinion in MicrobiologyQ15752444
P1476titleConformational regulation of CRISPR-associated nucleases
P478volume37

Reverse relations

cites work (P2860)
Q91754986A Type IV-A CRISPR-Cas System in Pseudomonas aeruginosa Mediates RNA-Guided Plasmid Interference In Vivo
Q96126597AcrIF9 tethers non-sequence specific dsDNA to the CRISPR RNA-guided surveillance complex
Q92492865CRISPR DNA elements controlling site-specific spacer integration and proper repeat length by a Type II CRISPR-Cas system
Q58568511CRISPR-Based Technologies: Impact of RNA-Targeting Systems
Q92897873CRISPR repeat sequences and relative spacing specify DNA integration by Pyrococcus furiosus Cas1 and Cas2
Q47441552Class 2 CRISPR-Cas RNA-guided endonucleases: Swiss Army knives of genome editing
Q47648610Conformational Dynamics of DNA Binding and Cas3 Recruitment by the CRISPR RNA-Guided Cascade Complex
Q90468390RNA Binding and HEPN-Nuclease Activation Are Decoupled in CRISPR-Cas13a
Q57250364RNA binding and HEPN nuclease activation are decoupled in CRISPR-Cas13a
Q90556101Regulation of the RNA and DNA nuclease activities required for Pyrococcus furiosus Type III-B CRISPR-Cas immunity
Q47894799Role of free DNA ends and protospacer adjacent motifs for CRISPR DNA uptake in Pyrococcus furiosus
Q92368132Structure Reveals a Mechanism of CRISPR-RNA-Guided Nuclease Recruitment and Anti-CRISPR Viral Mimicry
Q52323301The nuts and bolts of the Haloferax CRISPR-Cas system I-B.
Q59357210The ribonuclease activity of Csm6 is required for anti-plasmid immunity by Type III-A CRISPR-Cas systems

Search more.